HHsearch alignment for GI: 254780806 and conserved domain: PRK07261
>PRK07261 topology modulation protein; Provisional.
Probab=93.18 E-value=0.17 Score=28.28 Aligned_cols=32 Identities=34% Similarity=0.337 Sum_probs=22.4
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 4999980889888899999999999987995999987
Q gi|254780806|r 7 RIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDL 43 (265)
Q Consensus 7 kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~ 43 (265)
T Consensus 2 rI~-Ii-G~sGsGKSTlAr~L~~---~~~ip~~~LD~ 33 (171)
T PRK07261 2 KIA-II-GYSGSGKSTLARFLGQ---HYNCPVLHLDQ 33 (171)
T ss_pred EEE-EE-CCCCCCHHHHHHHHHH---HHCCCEEEECC
T ss_conf 899-98-8999868999999999---87979797022