HHsearch alignment for GI: 254780806 and conserved domain: PRK08118
>PRK08118 topology modulation protein; Reviewed.
Probab=92.85 E-value=0.18 Score=28.13 Aligned_cols=32 Identities=31% Similarity=0.429 Sum_probs=21.9
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 499998088988889999999999998799599998
Q gi|254780806|r 7 RIITIANQKGGVGKTTTAINLSTALAAIGENVLLID 42 (265)
Q Consensus 7 kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID 42 (265)
T Consensus 2 ~rI~Ii-G~~GsGKSTlAr~L~~---~~~ip~~~LD 33 (167)
T PRK08118 2 KKIILI-GSGGSGKSTLARQLGE---KLNIPVHHLD 33 (167)
T ss_pred CEEEEE-CCCCCCHHHHHHHHHH---HHCCCEEECC
T ss_conf 679998-8999879999999999---8896979644