HHsearch alignment for GI: 254780806 and conserved domain: PRK09302
>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=95.81 E-value=0.02 Score=33.62 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=29.1
Q ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEECC
Q ss_conf 74999980889888899999999999987-9959999878
Q gi|254780806|r 6 SRIITIANQKGGVGKTTTAINLSTALAAI-GENVLLIDLD 44 (265)
Q Consensus 6 ~kvI~v~s~KGGvGKTT~a~nlA~~la~~-g~rVllID~D 44 (265)
T Consensus 24 g~~~-LV~G~pGsGKTtla~QfL~~Ga~~~GE~~lyitl~ 62 (501)
T PRK09302 24 GRPT-LVSGTAGTGKTLFALQFLHNGIKSFGEPGVFVTFE 62 (501)
T ss_pred CCEE-EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 9779-99838999999999999999988559978999857