HHsearch alignment for GI: 254780806 and conserved domain: PRK09354
>PRK09354 recA recombinase A; Provisional.
Probab=93.77 E-value=0.21 Score=27.73 Aligned_cols=51 Identities=29% Similarity=0.438 Sum_probs=38.2
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC----CCCCCCHHHCCCCC
Q ss_conf 8749999808898888999999999999879959999878----77680112124633
Q gi|254780806|r 5 KSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLD----PQGNASTGLGIELY 58 (265)
Q Consensus 5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D----~q~~~~~~l~~~~~ 58 (265)
T Consensus 59 ~GRivEi~-G~esSGKTtlal~~iaeaQk~Gg~~a~iDaE~ald~~--~a~~lGVd~d 113 (350)
T PRK09354 59 KGRIVEIY-GPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPV--YAKKLGVDID 113 (350)
T ss_pred CCCEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH--HHHHCCCCHH
T ss_conf 87089998-8987779999999999999759947999600027988--9998497715