HHsearch alignment for GI: 254780806 and conserved domain: PRK10867
>PRK10867 signal recognition particle protein; Provisional.
Probab=98.56 E-value=2.3e-07 Score=62.44 Aligned_cols=163 Identities=19% Similarity=0.256 Sum_probs=83.2
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCH-HHCCCCCCCCCCEEEEEECCCCHHHCCCCC
Q ss_conf 687499998088988889999999999998-799599998787768011-212463334541167630257712102444
Q gi|254780806|r 4 KKSRIITIANQKGGVGKTTTAINLSTALAA-IGENVLLIDLDPQGNAST-GLGIELYDRKYSSYDLLIEEKNINQILIQT 81 (265)
Q Consensus 4 ~~~kvI~v~s~KGGvGKTT~a~nlA~~la~-~g~rVllID~D~q~~~~~-~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~ 81 (265)
T Consensus 98 ~~p~VIm~v-GLqGsGKTTT~aKLA~~lk~k~~k~vllvaaDt~RpaA~eQL~------------------~la------ 152 (453)
T PRK10867 98 QPPAVVLMA-GLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLE------------------TLA------ 152 (453)
T ss_pred CCCEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH------------------HHH------
T ss_conf 999699997-4688851858999999999738983798558877058999999------------------999------
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCC--CC------HHHHHHHCCCCC
Q ss_conf 4442000148874577500012322221023332247651027820331013332222--10------112331001111
Q gi|254780806|r 82 AIPNLSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLLT--MN------AMAAADSILVPL 153 (265)
Q Consensus 82 ~~~~l~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~~--~~------al~aad~viip~ 153 (265)
T Consensus 153 ~~~~v~~~~~~~-----------~~dp~~ia~~a~~~ak~~~~DvvivDTAGRl~~d~~Lm~El~~i~~~~~P~e~llV~ 221 (453)
T PRK10867 153 EQVGVDFFPSDV-----------GQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVV 221 (453)
T ss_pred HHCCCCEECCCC-----------CCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 851980436788-----------998899999999999977999999978760121088899999998763787137974
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCC
Q ss_conf 123113788875335777655432026774310020231253100112689998808520
Q gi|254780806|r 154 QCEFFALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKV 213 (265)
Q Consensus 154 ~p~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~~~v 213 (265)
T Consensus 222 Da~~-G-Q~---a~~~a----~~F~~~~~~~gvIlTKlDgdarGG~--alS~~~~t~~PI 270 (453)
T PRK10867 222 DAMT-G-QD---AANTA----KAFNEALPLTGVVLTKVDGDARGGA--ALSIRHITGKPI 270 (453)
T ss_pred ECCC-C-HH---HHHHH----HHHHHHCCCCEEEEECCCCCCCCHH--HHHHHHHHCCCC
T ss_conf 3223-5-66---89999----9999855987078750467876138--989999978696