HHsearch alignment for GI: 254780806 and conserved domain: TIGR01969

>TIGR01969 minD_arch cell division ATPase MinD; InterPro: IPR010224 Proper placement of the bacterial cell division site requires the site-specific inactivation of other potential division sites. In Escherichia coli, selection of the correct mid-cell site is mediated by the MinC, MinD and MinE proteins. Several members of this family are found in archaeal genomes but their function is uncharacterised. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. This entry represents the archaeal MinD family. The exact roles of the various archaeal MinD homologs are unknown. .
Probab=100.00  E-value=0  Score=349.67  Aligned_cols=231  Identities=29%  Similarity=0.497  Sum_probs=202.0

Q ss_pred             EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC-CCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCC
Q ss_conf             499998088988889999999999998799599998787-7680112124633345411676302577121024444442
Q gi|254780806|r    7 RIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDP-QGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPN   85 (265)
Q Consensus         7 kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~-q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~   85 (265)
T Consensus         1 r~I~iASGKGGtGKTT~tANLgVALA~~Gk~V~~~DADI~MANL~LiLgmE--~~~VTLhDVLAGeA~i~DAIY~gp~Gn   78 (258)
T TIGR01969         1 RIITIASGKGGTGKTTITANLGVALAKLGKKVLVLDADITMANLELILGME--DKPVTLHDVLAGEADIKDAIYEGPEGN   78 (258)
T ss_pred             CEEEEEECCCCCCHHHEEEHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC--CCCCCCCCCCCCCCCHHHHCCCCCCCC
T ss_conf             988999778898614000007788986097689994676677689884468--889675221344561001100288984


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             00014887457750001232222102333224765102782033101333222210112331001111123113788875
Q gi|254780806|r   86 LSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFFALEGLSQ  165 (265)
Q Consensus        86 l~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~~~~al~aad~viip~~p~~~s~~~~~~  165 (265)
T Consensus        79 V~V~PagvSLEg~rK------A~~~~L~dV~~-~i~~~~D~lLIDAPAGL~~~a~~Al~~a~elLLVvNPEi~SItDaLK  151 (258)
T TIGR01969        79 VKVIPAGVSLEGLRK------ADPDKLEDVLK-EIIDDTDFLLIDAPAGLERDAVTALAAADELLLVVNPEISSITDALK  151 (258)
T ss_pred             EEEECCCCCHHHCCC------CCHHHHHHHHH-HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHH
T ss_conf             478506122100012------68333289999-87204377887478983378999998618664866765446777889


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCEEECC-CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHH
Q ss_conf             33577765543202677431002023125-31001126899988085201562678688987773798579997999899
Q gi|254780806|r  166 LLETVEEVRRTVNSALDIQGIILTMFDSR-NSLSQQVVSDVRKNLGGKVYNTVIPRNVRISEAPSYGKPAIIYDLKCAGS  244 (265)
Q Consensus       166 ~~~~i~~~~~~~~~~~~~~~iv~N~~~~~-~~~~~~~~~~l~~~~~~~v~~~~Ip~~~~i~~a~~~g~pv~~~~p~s~~a  244 (265)
T Consensus       152 ~k----~va~~lG--t~ilG~vlNRv~~~~tel~---~~eiE~iLevPVl~-~vPEDP~VR~AAa~G~P~V~~~P~SpAA  221 (258)
T TIGR01969       152 VK----IVAEKLG--TAILGVVLNRVTRDKTELG---REEIEAILEVPVLG-VVPEDPEVRRAAAFGEPVVVYSPNSPAA  221 (258)
T ss_pred             HH----HHHHHCC--CCEEEEEEEECCCCCCCCC---HHHHHHHHCCCEEE-EECCCHHHHHHHHCCCCEEEECCCCHHH
T ss_conf             99----9987608--8324689960236666378---88999884797389-8569843445642485368847998789


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999999
Q gi|254780806|r  245 QAYLKLASELIQ  256 (265)
Q Consensus       245 ~~~~~la~el~~  256 (265)
T Consensus       222 ~A~~eLA~~l~G  233 (258)
T TIGR01969       222 QAFMELAAELAG  233 (258)
T ss_pred             HHHHHHHHHHHC
T ss_conf             999999999718