HHsearch alignment for GI: 254780806 and conserved domain: TIGR02237

>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939 This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.

Probab=97.08  E-value=0.0013  Score=40.50  Aligned_cols=43  Identities=35%  Similarity=0.433  Sum_probs=36.3

Q ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf             749999808898888999999999999879959999878776801
Q gi|254780806|r    6 SRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNAS   50 (265)
Q Consensus         6 ~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~   50 (265)
T Consensus        11 ~G~iTQiYGp~G~GKTn~c~~~a~~a~~~Gk~v~YiDTE--GGLS   53 (223)
T TIGR02237        11 RGIITQIYGPPGSGKTNICLILAVNAARQGKKVVYIDTE--GGLS   53 (223)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC--CCCH
T ss_conf             035889875899867899999999998618958999628--9832