HHsearch alignment for GI: 254780806 and conserved domain: TIGR03499

>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=98.16  E-value=1.9e-06  Score=57.11  Aligned_cols=41  Identities=34%  Similarity=0.483  Sum_probs=20.4

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHH-CC-CCEEEEECCCC
Q ss_conf             87499998088988889999999999998-79-95999987877
Q gi|254780806|r    5 KSRIITIANQKGGVGKTTTAINLSTALAA-IG-ENVLLIDLDPQ   46 (265)
Q Consensus         5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~-~g-~rVllID~D~q   46 (265)
T Consensus       193 ~~~vi~lv-GPTGVGKTTTiAKLAa~~~l~~~~~~V~lIT~Dty  235 (282)
T TIGR03499       193 QGGVIALV-GPTGVGKTTTLAKLAARFVLEHGKKKVALITTDTY  235 (282)
T ss_pred             CCCEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             67279997-78887578899999999999738996799980777