HHsearch alignment for GI: 254780806 and conserved domain: TIGR03499
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=98.16 E-value=1.9e-06 Score=57.11 Aligned_cols=41 Identities=34% Similarity=0.483 Sum_probs=20.4
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHH-CC-CCEEEEECCCC
Q ss_conf 87499998088988889999999999998-79-95999987877
Q gi|254780806|r 5 KSRIITIANQKGGVGKTTTAINLSTALAA-IG-ENVLLIDLDPQ 46 (265)
Q Consensus 5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~-~g-~rVllID~D~q 46 (265)
T Consensus 193 ~~~vi~lv-GPTGVGKTTTiAKLAa~~~l~~~~~~V~lIT~Dty 235 (282)
T TIGR03499 193 QGGVIALV-GPTGVGKTTTLAKLAARFVLEHGKKKVALITTDTY 235 (282)
T ss_pred CCCEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 67279997-78887578899999999999738996799980777