HHsearch alignment for GI: 254780806 and conserved domain: cd00983

>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=94.92  E-value=0.078  Score=30.18  Aligned_cols=53  Identities=32%  Similarity=0.418  Sum_probs=38.8

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC--CCHHHCCCCC
Q ss_conf             87499998088988889999999999998799599998787768--0112124633
Q gi|254780806|r    5 KSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGN--ASTGLGIELY   58 (265)
Q Consensus         5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~--~~~~l~~~~~   58 (265)
T Consensus        54 ~GRivei~-G~essGKTtlal~~ia~aQk~gg~~~~iDaE~a~d~~~a~~lGVD~~  108 (325)
T cd00983          54 KGRIIEIY-GPESSGKTTLALHAIAEAQKLGGTVAFIDAEHALDPVYAKKLGVDLD  108 (325)
T ss_pred             CCEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHCCCCHH
T ss_conf             88089998-89877799999999999873598399996254259899998099846