HHsearch alignment for GI: 254780806 and conserved domain: cd00983
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=94.92 E-value=0.078 Score=30.18 Aligned_cols=53 Identities=32% Similarity=0.418 Sum_probs=38.8
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC--CCHHHCCCCC
Q ss_conf 87499998088988889999999999998799599998787768--0112124633
Q gi|254780806|r 5 KSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGN--ASTGLGIELY 58 (265)
Q Consensus 5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~--~~~~l~~~~~ 58 (265)
T Consensus 54 ~GRivei~-G~essGKTtlal~~ia~aQk~gg~~~~iDaE~a~d~~~a~~lGVD~~ 108 (325)
T cd00983 54 KGRIIEIY-GPESSGKTTLALHAIAEAQKLGGTVAFIDAEHALDPVYAKKLGVDLD 108 (325)
T ss_pred CCEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCHHHHHHCCCCHH
T ss_conf 88089998-89877799999999999873598399996254259899998099846