HHsearch alignment for GI: 254780806 and conserved domain: cd01121
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=92.96 E-value=0.24 Score=27.38 Aligned_cols=35 Identities=26% Similarity=0.445 Sum_probs=31.1
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 99808898888999999999999879959999878
Q gi|254780806|r 10 TIANQKGGVGKTTTAINLSTALAAIGENVLLIDLD 44 (265)
Q Consensus 10 ~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D 44 (265)
T Consensus 85 vLlgGePGIGKSTLLLQia~~la~~~~~vLYvSGE 119 (372)
T cd01121 85 ILIGGDPGIGKSTLLLQVAARLAKRGGKVLYVSGE 119 (372)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECH
T ss_conf 99825998868899999999998639938998245