HHsearch alignment for GI: 254780806 and conserved domain: cd01897
>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.
Probab=90.80 E-value=0.16 Score=28.31 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=18.1
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 99998088988889999999999998799599998
Q gi|254780806|r 8 IITIANQKGGVGKTTTAINLSTALAAIGENVLLID 42 (265)
Q Consensus 8 vI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID 42 (265)
T Consensus 2 ~Vaiv-G~pNvGKStL~N~L------~g~~~~v~~ 29 (168)
T cd01897 2 TLVIA-GYPNVGKSSLVNKL------TRAKPEVAP 29 (168)
T ss_pred EEEEE-CCCCCCHHHHHHHH------HCCCCEECC
T ss_conf 79998-89998899999999------589860237