HHsearch alignment for GI: 254780806 and conserved domain: cd02036
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=100.00 E-value=1.3e-43 Score=274.17 Aligned_cols=178 Identities=31% Similarity=0.463 Sum_probs=151.3
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-CCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCE
Q ss_conf 999980889888899999999999987995999987877-6801121246333454116763025771210244444420
Q gi|254780806|r 8 IITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQ-GNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPNL 86 (265)
Q Consensus 8 vI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q-~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~l 86 (265)
T Consensus 1 iIav~s~KGGVGKTT~a~NLA~aLa~~g~~vllvD~D~~~~~l~~~~~~~~~-~~~~~---------------------~ 58 (179)
T cd02036 1 VIVVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDADLGLRNLDLILGLENR-VVYTL---------------------H 58 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCC-CCCHH---------------------H
T ss_conf 9899739998709999999999999779918999589999983666176556-65313---------------------1
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf 00148874577500012322221023332247651027820331013332222101123310011111231137888753
Q gi|254780806|r 87 SIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLLTMNAMAAADSILVPLQCEFFALEGLSQL 166 (265)
Q Consensus 87 ~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~~~~al~aad~viip~~p~~~s~~~~~~~ 166 (265)
T Consensus 59 ~vl~---------------------------------gD~viiD~ppg~~~~~~~~l~~ad~vlvv~~p~~~sl~~~~~~ 105 (179)
T cd02036 59 DVLA---------------------------------GDYILIDSPAGIERGFITAIAPADEALLVTTPEISSLRDADRV 105 (179)
T ss_pred CCCC---------------------------------CCEEEEECCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHH
T ss_conf 1266---------------------------------9999997999988899999984681256378858899999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHH
Q ss_conf 35777655432026774310020231253100112689998808520156267868898777379857999799989999
Q gi|254780806|r 167 LETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKVYNTVIPRNVRISEAPSYGKPAIIYDLKCAGSQA 246 (265)
Q Consensus 167 ~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~~~v~~~~Ip~~~~i~~a~~~g~pv~~~~p~s~~a~~ 246 (265)
T Consensus 106 ~~~~~~~------~~~~~~vv~Nr~~~~~~~~~~~~~~~~~~l~~~vlg-~IP~d~~v~eA~~~g~Pv~~~~P~s~aA~a 178 (179)
T cd02036 106 KGLLEAL------GIKVVGVIVNRVRPDMVEGGDMVEDIEEILGVPLLG-VIPEDPAVIRATNRGEPVVLNKPKSPAAQA 178 (179)
T ss_pred HHHHHHC------CCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEE-ECCCCHHHHHHHHCCCEEEEECCCCHHHHC
T ss_conf 9999825------996469998454676663677999999855996798-877988999987679538987999956630
Q ss_pred H
Q ss_conf 9
Q gi|254780806|r 247 Y 247 (265)
Q Consensus 247 ~ 247 (265)
T Consensus 179 y 179 (179)
T cd02036 179 Y 179 (179)
T ss_pred C
T ss_conf 9