HHsearch alignment for GI: 254780806 and conserved domain: cd02037
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=99.96 E-value=8e-29 Score=187.77 Aligned_cols=158 Identities=23% Similarity=0.346 Sum_probs=116.6
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCE
Q ss_conf 9999808898888999999999999879959999878776-801121246333454116763025771210244444420
Q gi|254780806|r 8 IITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQG-NASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPNL 86 (265)
Q Consensus 8 vI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~-~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~l 86 (265)
T Consensus 1 vi~v~s~kggvgkst~~~~la~~l~~~g~~v~~~d~di~gpsip~---------------~~rG---------------- 49 (169)
T cd02037 1 VIAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADIYGPSIPK---------------MWRG---------------- 49 (169)
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCE---------------EEEC----------------
T ss_conf 989974999881999999999999987997899971379997550---------------1204----------------
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCC--CCCHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 0014887457750001232222102333224765102782033101333222--21011233100111112311378887
Q gi|254780806|r 87 SIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFNLL--TMNAMAAADSILVPLQCEFFALEGLS 164 (265)
Q Consensus 87 ~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~~~--~~~al~aad~viip~~p~~~s~~~~~ 164 (265)
T Consensus 50 -------------------p~~~~~i~q~l~~~~w~~lDyLIID~PPGtgD~~lt~~~~~~~d~~IvVTTP~~~s~~Da~ 110 (169)
T cd02037 50 -------------------PMKMGAIKQFLTDVDWGELDYLVIDMPPGTGDEHLTLAQSLPIDGAVIVTTPQEVALDDVR 110 (169)
T ss_pred -------------------HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
T ss_conf -------------------7389999999985254667889996899987077879875056747999469588999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCEEE---CC-----CHHHHHHHHHHHHHHCCCCCCCCCCCCH
Q ss_conf 5335777655432026774310020231---25-----3100112689998808520156267868
Q gi|254780806|r 165 QLLETVEEVRRTVNSALDIQGIILTMFD---SR-----NSLSQQVVSDVRKNLGGKVYNTVIPRNV 222 (265)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~iv~N~~~---~~-----~~~~~~~~~~l~~~~~~~v~~~~Ip~~~ 222 (265)
T Consensus 111 r~i~~~~~~------~i~i~GvVeNMs~~~c~~c~~~~~ifg~~~~~~la~~~~i~~Lg-~IP~dp 169 (169)
T cd02037 111 KAIDMFKKV------NIPILGVVENMSYFVCPHCGKKIYIFGKGGGEKLAEELGVPLLG-KIPLDP 169 (169)
T ss_pred HHHHHHHHC------CCCEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEE-ECCCCC
T ss_conf 999999975------99707999879666079999735278884499999995999898-728999