HHsearch alignment for GI: 254780806 and conserved domain: cd04122
>cd04122 Rab14 Rab14 subfamily. Rab14 GTPases are localized to biosynthetic compartments, including the rough ER, the Golgi complex, and the trans-Golgi network, and to endosomal compartments, including early endosomal vacuoles and associated vesicles. Rab14 is believed to function in both the biosynthetic and recycling pathways between the Golgi and endosomal compartments. Rab14 has also been identified on GLUT4 vesicles, and has been suggested to help regulate GLUT4 translocation. In addition, Rab14 is believed to play a role in the regulation of phagocytosis. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GT
Probab=90.95 E-value=1.1 Score=23.40 Aligned_cols=109 Identities=17% Similarity=0.066 Sum_probs=55.4
Q ss_pred CCCEEEECCCC--CCCCCCHHHHHHHCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHH
Q ss_conf 82033101333--222210112331001111123-113788875335777655432026774310020231253100112
Q gi|254780806|r 125 SYIFLDCPPSF--NLLTMNAMAAADSILVPLQCE-FFALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQV 201 (265)
Q Consensus 125 D~IiiD~pp~~--~~~~~~al~aad~viip~~p~-~~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~ 201 (265)
T Consensus 52 ~l~iwDtaG~e~~~~~~~~~~~~a~~~ilvydvt~~~Sf~~l~~---w~~~~~~~~~~~~~i-ilVGNK~DL~~--~r-- 123 (166)
T cd04122 52 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS---WLTDARNLTNPNTVI-FLIGNKADLEA--QR-- 123 (166)
T ss_pred EEEEEECCCCCCCCCCCHHHEECCCEEEEEECCCCHHHHHHHHH---HHHHHHHHCCCCCEE-EECCCCCCHHH--CC--
T ss_conf 99999899985444252111431546599725874767999999---999999856999758-70340157444--38--
Q ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHHHH
Q ss_conf 6899988085201562678688987773798579997999--899999999999999
Q gi|254780806|r 202 VSDVRKNLGGKVYNTVIPRNVRISEAPSYGKPAIIYDLKC--AGSQAYLKLASELIQ 256 (265)
Q Consensus 202 ~~~l~~~~~~~v~~~~Ip~~~~i~~a~~~g~pv~~~~p~s--~~a~~~~~la~el~~ 256 (265)
T Consensus 124 ---------------~V~~~e~~~~a~~~~~~~~E~SAk~g~nV~e~F~~l~~~i~~ 165 (166)
T cd04122 124 ---------------DVTYEEAKQFADENGLLFLECSAKTGENVEDAFLETAKKIYQ 165 (166)
T ss_pred ---------------CCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf ---------------999999999999869989998658780889999999999974