HHsearch alignment for GI: 254780806 and conserved domain: pfam07755

>pfam07755 DUF1611 Protein of unknown function (DUF1611). This region is found in a number of hypothetical bacterial and archaeal proteins. The region is approximately 350 residues long. A member of this family is thought to associate with another subunit to form an H+-transporting ATPase, but no evidence has been found to support this.
Probab=97.36  E-value=0.0019  Score=39.65  Aligned_cols=170  Identities=19%  Similarity=0.285  Sum_probs=97.2

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCC
Q ss_conf             87499998088988889999999999998799599998787768011212463334541167630257712102444444
Q gi|254780806|r    5 KSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIP   84 (265)
Q Consensus         5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~   84 (265)
T Consensus       112 ~~~rvl~vGTDcavGK~tTal~l~~~l~~~Gi~a~fiaTGQTGili~g---------~Gv--------~-----------  163 (302)
T pfam07755       112 KAKRVLTVGTDCAVGKMTTALELERALRERGLNAAFVATGQTGILIAG---------YGV--------P-----------  163 (302)
T ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEC---------CEE--------E-----------
T ss_conf             987899960573340789999999999977998479972761368815---------247--------8-----------


Q ss_pred             CEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC-----CCCCCCHHHHH--HHCCCCCCCCC
Q ss_conf             200014887457750001232222102333224765102782033101333-----22221011233--10011111231
Q gi|254780806|r   85 NLSIIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSF-----NLLTMNAMAAA--DSILVPLQCEF  157 (265)
Q Consensus        85 ~l~iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~-----~~~~~~al~aa--d~viip~~p~~  157 (265)
T Consensus       164 -iDav~~DFvaGavE--------------~~v-~~~~~~~d~iiIEGQgSL~hP~y~gvsl~lL~Gs~Pd~lIL~H~p~R  227 (302)
T pfam07755       164 -LDAVPADFVAGAVE--------------ALV-LDAAEEDDWIVIEGQGSLSHPAYSGVTLGLLHGSQPDALVLCHRPGR  227 (302)
T ss_pred             -ECCCHHHHHHHHHH--------------HHH-HHHCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCC
T ss_conf             -43224766767899--------------999-86454678799916543236656654598860789986999637898


Q ss_pred             HH--------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             13--------7888753357776554320267743100202312531001126899988085201562678
Q gi|254780806|r  158 FA--------LEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSDVRKNLGGKVYNTVIPR  220 (265)
Q Consensus       158 ~s--------~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~l~~~~~~~v~~~~Ip~  220 (265)
T Consensus       228 ~~~~~~~~~~iP~l~~~i~l~e~~a~~~-~~~kvvgIslNt~~l~~~ea~~~~~~~~~~~glPv~Dp-~r~  296 (302)
T pfam07755       228 KHRRGFPHYPLPPLEEEIELIEALAGTT-PPAKVVGISLNTRGLSEAEAREAIERIEEELGLPVTDP-VRF  296 (302)
T ss_pred             CEECCCCCCCCCCHHHHHHHHHHHHCCC-CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEC-CCC
T ss_conf             6227876688999899999999973647-99739999955787999999999999999989974712-123