HHsearch alignment for GI: 254780807 and conserved domain: COG2242

Probab=98.43  E-value=3.6e-06  Score=56.50  Aligned_cols=101  Identities=21%  Similarity=0.244  Sum_probs=82.8

Q ss_pred             HHHHHHCCC-CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHH-HHC
Q ss_conf             564310012-3443111114677335656522755466347875000038999999999738980-9980426653-312
Q gi|254780807|r   62 SLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-PQM  138 (168)
Q Consensus        62 Sl~~~~~~~-~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~-~~~  138 (168)
T Consensus        24 al~ls~L~~~~g~~l~DIGaGtGsi~iE~a~~~p~~~---v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~  100 (187)
T COG2242          24 ALTLSKLRPRPGDRLWDIGAGTGSITIEWALAGPSGR---VIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDL  100 (187)
T ss_pred             HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCE---EEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCC
T ss_conf             9889860889999899957886689999997398855---9999258889999999999849996799954645763699


Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             4798699991479989999984885206
Q gi|254780807|r  139 ITTCDVISARALADLDTLLEYSFPWLYQ  166 (168)
Q Consensus       139 ~~~~d~v~sRA~a~l~~ll~~~~pllk~  166 (168)
T Consensus       101 -~~~daiFIGGg~~i~~ile~~~~~l~~  127 (187)
T COG2242         101 -PSPDAIFIGGGGNIEEILEAAWERLKP  127 (187)
T ss_pred             -CCCCEEEECCCCCHHHHHHHHHHHCCC
T ss_conf             -999999987987778999999997186