HHsearch alignment for GI: 254780807 and conserved domain: pfam01861

>pfam01861 DUF43 Protein of unknown function DUF43. This family includes archaebacterial proteins of unknown function. All the members are 350-400 amino acids long.

Probab=90.95  E-value=1  Score=24.95  Aligned_cols=74  Identities=11%  Similarity=0.223  Sum_probs=55.6

Q ss_pred             CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHH-HH-HCCCCCCEEEEC
Q ss_conf             3443111114677335656522755466347875000038999999999738980998042665-33-124798699991
Q gi|254780807|r   71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-AP-QMITTCDVISAR  148 (168)
Q Consensus        71 ~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~-~~-~~~~~~d~v~sR  148 (168)
T Consensus        44 ~Gk~iL~vG-DDDLtSlA~al~~~p~---~I~VvDIDeRll~fI~~~A~~~gl~i~~~~~DlR~pLP~~l~~~FD~f~TD  119 (243)
T pfam01861        44 EGKEILVLG-DDDLTSLAAALTGLPK---RIAVVDIDERLIKFIERVAKEEGLKIEAFVHDLRNPLPEDLKHKFDVFITD  119 (243)
T ss_pred             CCCEEEEEC-CCCHHHHHHHHCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCEEECC
T ss_conf             798799972-8618789999648985---489996758999999999997499716887410148999996167989718