HHsearch alignment for GI: 254780807 and conserved domain: pfam02527
>pfam02527 GidB rRNA small subunit methyltransferase G. This is a family of bacterial glucose inhibited division proteins these are probably involved in the regulation of cell devision. GidB has been shown to be a methyltransferase G specific to the rRNA small subunit. Previously identified as a glucose-inhibited division protein B that appears to be present and in a single copy in all complete eubacterial genomes so far sequenced. GidB specifically methylates the N7 position of a guanosine in 16S rRNA.
Probab=100.00 E-value=0 Score=307.80 Aligned_cols=139 Identities=35% Similarity=0.522 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC-CCCEEECCCCCHHHHHHHHCCCCCCCCEEEE
Q ss_conf 999999999999984632130430899999898646356431001234-4311111467733565652275546634787
Q gi|254780807|r 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103 (168)
Q Consensus 25 q~~~l~~y~~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~~~-~~ilDiGSGaGfPGi~laI~~p~~~~~~v~L 103 (168)
T Consensus 1 Qlekl~~y~~lL~~~N~~~NLt~~~~~~~i~~rHi~DSl~~~~~~~~~~~~ilDiGSGaGfPGi~LAI~~p~~~---~~L 77 (184)
T pfam02527 1 QLEKLELYVQLLLEWNKRYNLTSITEPNELLERHLLDSLVVLEYLDNIRIKVADVGSGAGFPGIPLAIAFPDKK---LTL 77 (184)
T ss_pred CHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCE---EEE
T ss_conf 97999999999998557431146799899999999999998774266798688347988846799999677855---999
Q ss_pred EHHHHHHHHHHHHHHHHHCCCC-EEEECHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 5000038999999999738980-998042665331247986999914799899999848852067
Q gi|254780807|r 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167 (168)
Q Consensus 104 ves~~KK~~FL~~~~~~L~L~~-~vi~~r~e~~~~~~~~~d~v~sRA~a~l~~ll~~~~pllk~k 167 (168)
T Consensus 78 vEs~~KK~~FL~~v~~~L~L~nv~v~~~R~E~~~~-~~~~D~v~aRA~a~l~~ll~~~~~~l~~~ 141 (184)
T pfam02527 78 LESLLKKINFLEELKKELNLENVTIVHARAEEYQH-EEQYDVITSRAVASLNELTEWALPLLKPG 141 (184)
T ss_pred EECHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCC-CCCCCEEEECHHCCHHHHHHHHHHHCCCC
T ss_conf 92828999999999998599976999560441464-46787899810057999999999863889