HHsearch alignment for GI: 254780807 and conserved domain: pfam08704

>pfam08704 GCD14 tRNA methyltransferase complex GCD14 subunit. GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA.
Probab=91.77  E-value=1.1  Score=24.68  Aligned_cols=90  Identities=12%  Similarity=0.060  Sum_probs=58.6

Q ss_pred             CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CC-EEEECHH-HH-HHH-CCCCCC
Q ss_conf             1234431111146773356565227554663478750000389999999997389-80-9980426-65-331-247986
Q gi|254780807|r   69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG-KVFACRI-QE-APQ-MITTCD  143 (168)
Q Consensus        69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~-~vi~~r~-e~-~~~-~~~~~d  143 (168)
T Consensus       100 i~PG~~VlEaGtGSGsLT~~Lara--vgp~G~v~t~E~~e~r~~~A~~n~~~~g~~~~v~~~~rDv~~~gf~~~~~~~~D  177 (309)
T pfam08704       100 LKPGSVVCESGTGSGSLSHAIART--VAPTGHLYTFEFHEQRADKAREEFREHGLDSLVTVTHRDVCKSGFDTEVSNKAD  177 (309)
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHH--HCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCHHCCCCCCCCCCCCC
T ss_conf             899999998367842999999997--488865999844789999999999874987505889852001366644566435


Q ss_pred             EEEECCCCCHHHHHHHH
Q ss_conf             99991479989999984
Q gi|254780807|r  144 VISARALADLDTLLEYS  160 (168)
Q Consensus       144 ~v~sRA~a~l~~ll~~~  160 (168)
T Consensus       178 ~VfLDlp~PW~ai~~~~  194 (309)
T pfam08704       178 AVFLDLPAPWEAIPHAA  194 (309)
T ss_pred             EEEECCCCHHHHHHHHH
T ss_conf             89975899799889999