HHsearch alignment for GI: 254780807 and conserved domain: smart00650
>smart00650 rADc Ribosomal RNA adenine dimethylases.
Probab=90.30 E-value=0.91 Score=25.25 Aligned_cols=59 Identities=20% Similarity=0.156 Sum_probs=40.2
Q ss_pred CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHH
Q ss_conf 234431111146773356565227554663478750000389999999997389-809980426653
Q gi|254780807|r 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135 (168)
Q Consensus 70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~ 135 (168)
T Consensus 12 ~~~d~VlEIGPG~G~--LT~~Ll~~---~~~v~aiE~D~~l~~~L~~~~~--~~~n~~ii~~D~L~~ 71 (169)
T smart00650 12 RPGDTVLEIGPGKGA--LTEELLER---AARVTAIEIDPRLAPRLREKFA--AADNLTVIHGDALKF 71 (169)
T ss_pred CCCCEEEEECCCHHH--HHHHHHHH---CCCCCEEECCHHHHHHHHHHHC--CCCCEEEEECCHHCC
T ss_conf 994979996897029--99999973---1635316378899999998641--079779995711125