HHsearch results for GI: 254780807 and protein with PDBid: 1mjf_A
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=94.17 E-value=0.28 Score=26.93 Aligned_cols=98 Identities=15% Similarity=0.143 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHH--------H--
Q ss_conf 999898646356431001234431111146773356565227554663478750000389999999997--------3--
Q gi|254780807|r 52 EDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------T-- 121 (168)
Q Consensus 52 ~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~--------L-- 121 (168)
+..|.+-+.+... ...+++++++-+|.|+|.. +-.+..... .+++.||-.++-+...++.-.. .
T Consensus 58 e~~Y~e~l~h~~l--~~~~~p~~VLiiG~G~G~~--~~~~l~~~~--~~v~~VEiD~~vi~~a~~~~~~~~~~~e~~~~~ 131 (281)
T 1mjf_A 58 ERSYHEPLVHPAM--LAHPKPKRVLVIGGGDGGT--VREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNG 131 (281)
T ss_dssp THHHHHHHHHHHH--HHSSCCCEEEEEECTTSHH--HHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHH--HCCCCCCEEEEEECCCHHH--HHHHHHCCC--CEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCC
T ss_conf 7777898886887--5099988799992894399--999984388--358997068899999998511142134453035
Q ss_pred C-CCCEEEECHHHHHHHCCCCCCEEEECCCCCHHH
Q ss_conf 8-980998042665331247986999914799899
Q gi|254780807|r 122 A-ARGKVFACRIQEAPQMITTCDVISARALADLDT 155 (168)
Q Consensus 122 ~-L~~~vi~~r~e~~~~~~~~~d~v~sRA~a~l~~ 155 (168)
. -+.+++.+.+.+.-...++||+|+.=++.|...
T Consensus 132 ~d~rv~v~~~Da~~~l~~~~~yDvIi~D~~~p~~~ 166 (281)
T 1mjf_A 132 KHEKAKLTIGDGFEFIKNNRGFDVIIADSTDPVGP 166 (281)
T ss_dssp CCSSEEEEESCHHHHHHHCCCEEEEEEECCCCC--
T ss_pred CCCCEEEEECHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf 79966999621899973078878899918998886