HHsearch results for GI: 254780807 and protein with PDBid: 1ne2_A
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.43 E-value=0.00034 Score=43.77 Aligned_cols=91 Identities=11% Similarity=-0.046 Sum_probs=58.1
Q ss_pred CEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
Q ss_conf 30430899999898646356431001234431111146773356565227554663478750000389999999997389
Q gi|254780807|r 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123 (168)
Q Consensus 44 NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L 123 (168)
.|=-..|+.++-.+ ++.-+....-+ .+++|+|+|+|.|.=|+.++..-+ .+|+.+|....-+.-.++ .--
T Consensus 26 ~leQY~t~~~iaa~-~~~~~~~~gd~-~Gk~VLDlGcGtG~l~i~a~~~ga----~~V~~vDid~~a~~~a~~----N~~ 95 (200)
T 1ne2_A 26 YLEQYPTDASTAAY-FLIEIYNDGNI-GGRSVIDAGTGNGILACGSYLLGA----ESVTAFDIDPDAIETAKR----NCG 95 (200)
T ss_dssp ----CCCCHHHHHH-HHHHHHHHTSS-BTSEEEEETCTTCHHHHHHHHTTB----SEEEEEESCHHHHHHHHH----HCT
T ss_pred CCCCCCCCHHHHHH-HHHHHHHCCCC-CCCEEEECCCCHHHHHHHHHHCCC----CEEEEEECCHHHHHHHHH----HHH
T ss_conf 71007998899999-99999866998-939899875751099999996799----879675089999999999----898
Q ss_pred CCEEEECHHHHHHHCCCCCCEEEE
Q ss_conf 809980426653312479869999
Q gi|254780807|r 124 RGKVFACRIQEAPQMITTCDVISA 147 (168)
Q Consensus 124 ~~~vi~~r~e~~~~~~~~~d~v~s 147 (168)
+++++++++++++ .+||+|++
T Consensus 96 ~~~~~~~d~~~~~---~~fD~Vi~ 116 (200)
T 1ne2_A 96 GVNFMVADVSEIS---GKYDTWIM 116 (200)
T ss_dssp TSEEEECCGGGCC---CCEEEEEE
T ss_pred HCCCEEEEHHHCC---CCCCEEEE
T ss_conf 5785376521057---75488987