HHsearch results for GI: 254780807 and protein with PDBid: 1y8c_A
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.50A {Clostridium acetobutylicum atcc 824} SCOP: c.66.1.43
Probab=98.16 E-value=2e-05 Score=50.90 Aligned_cols=124 Identities=11% Similarity=0.043 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEH
Q ss_conf 99999999999984632130430899999898646356431001234431111146773356565227554663478750
Q gi|254780807|r 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105 (168)
Q Consensus 26 ~~~l~~y~~ll~~~N~~~NLts~~~~~~~~~rHi~DSl~~~~~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lve 105 (168)
.+.+..|++.+..++. +. +-|...+.+.+.- ....+.+|+|+|+|.|--.++||=. +..++.+|
T Consensus 3 Y~~~a~~Yd~l~~~~~--------~y-~~~~~~~~~~~~~--~~~~~~~iLDlGCGtG~~~~~l~~~-----g~~v~gvD 66 (246)
T 1y8c_A 3 YNKFAHIYDKLIRADV--------DY-KKWSDFIIEKCVE--NNLVFDDYLDLACGTGNLTENLCPK-----FKNTWAVD 66 (246)
T ss_dssp HHHHHHHHHHHTTCSC--------CH-HHHHHHHHHHHHT--TTCCTTEEEEETCTTSTTHHHHGGG-----SSEEEEEC
T ss_pred HHHHHHHHHHHHCCCC--------CH-HHHHHHHHHHHHH--HCCCCCEEEEEECCCCHHHHHHHHC-----CCEEEEEE
T ss_conf 7789999999842899--------88-9999999999997--3899892999807462999999974-----99599996
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEEC--CC---CCHHH---HHHHHHHHHCC
Q ss_conf 0003899999999973898099804266533124798699991--47---99899---99984885206
Q gi|254780807|r 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR--AL---ADLDT---LLEYSFPWLYQ 166 (168)
Q Consensus 106 s~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sR--A~---a~l~~---ll~~~~pllk~ 166 (168)
.++.-+...+.-....+++++++++.+.+++. .++||+|++= ++ .+.+. ++.-+...||+
T Consensus 67 ~S~~ml~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~~~~~l~~i~~~Lkp 134 (246)
T 1y8c_A 67 LSQEMLSEAENKFRSQGLKPRLACQDISNLNI-NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKE 134 (246)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEE
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHC-CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 74999998763112234432223466777510-334122412102221368878999999999997499