HHsearch results for GI: 254780807 and protein with PDBid: 2yx1_A
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 2zzm_A*
Probab=97.24 E-value=0.0011 Score=40.95 Aligned_cols=89 Identities=8% Similarity=0.052 Sum_probs=65.5
Q ss_pred CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHHHHHHHCCCCCCEEE
Q ss_conf 12344311111467733565652275546634787500003899999999973898--0998042665331247986999
Q gi|254780807|r 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTCDVIS 146 (168)
Q Consensus 69 ~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~e~~~~~~~~~d~v~ 146 (168)
...+..++|+|+|-|-=+|+ +. +...|+.+|.++.-+..+++-++..++. .+++++.+.+. ..+||.|+
T Consensus 193 ~~~~~~vlD~f~g~G~~~i~--~~----~~~~v~a~d~n~~a~~~~~~N~~~N~~~~~v~~~~~D~~~~---~~~~D~Ii 263 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA--CK----NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV---DVKGNRVI 263 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH--TT----TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC---CCCEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHH--CC----CCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHC---CCCCCEEE
T ss_conf 17898899965764676653--13----55169999799999999999999829987589995753454---56874999
Q ss_pred ECCCCCHHHHHHHHHHHHCC
Q ss_conf 91479989999984885206
Q gi|254780807|r 147 ARALADLDTLLEYSFPWLYQ 166 (168)
Q Consensus 147 sRA~a~l~~ll~~~~pllk~ 166 (168)
+=--..-..+++-+.++|++
T Consensus 264 ~~~P~~~~~~l~~a~~~l~~ 283 (336)
T 2yx1_A 264 MNLPKFAHKFIDKALDIVEE 283 (336)
T ss_dssp ECCTTTGGGGHHHHHHHEEE
T ss_pred ECCHHHHHHHHHHHHHHHCC
T ss_conf 65804669999999998367