HHsearch results for GI: 254780807 and protein with PDBid: 3frh_A

>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*

Probab=97.51  E-value=0.00023  Score=44.80  Aligned_cols=76  Identities=11%  Similarity=-0.029  Sum_probs=58.2

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEEECC
Q ss_conf             23443111114677335656522755466347875000038999999999738980998042665331247986999914
Q gi|254780807|r   70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA  149 (168)
Q Consensus        70 ~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~~~vi~~r~e~~~~~~~~~d~v~sRA  149 (168)
                      ..+.+|+|+|+|.|.=.++++   |   +..|+.+|-+..-+.+.+......++++......+.+.+. ..+||+|++-.
T Consensus       104 ~~~~~VLDlGCG~G~l~~~~~---~---~~~v~gvD~s~~~l~~ar~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~  176 (253)
T 3frh_A          104 ETPRRVLDIACGLNPLALYER---G---IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP-AEAGDLALIFK  176 (253)
T ss_dssp             CCCSEEEEETCTTTHHHHHHT---T---CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC-CCBCSEEEEES
T ss_pred             CCCCEEEEECCCCCHHHHHHC---C---CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCHHHCCC-CCCCCHHHHHC
T ss_conf             999859996788889999976---8---9838999797999999999999829970488556222457-76744105424


Q ss_pred             CCC
Q ss_conf             799
Q gi|254780807|r  150 LAD  152 (168)
Q Consensus       150 ~a~  152 (168)
                      +-.
T Consensus       177 vl~  179 (253)
T 3frh_A          177 LLP  179 (253)
T ss_dssp             CHH
T ss_pred             HHH
T ss_conf             486