HHsearch results for GI: 254780807 and protein with PDBid: 3ggd_A
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural genomics, joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=96.01 E-value=0.014 Score=34.50 Aligned_cols=91 Identities=14% Similarity=-0.077 Sum_probs=58.1
Q ss_pred CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC-CCEEEECHHHHHHH-----CCCC
Q ss_conf 01234431111146773356565227554663478750000389999999997389-80998042665331-----2479
Q gi|254780807|r 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ-----MITT 141 (168)
Q Consensus 68 ~~~~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L-~~~vi~~r~e~~~~-----~~~~ 141 (168)
+.+.+.+++|+|+|.|.-...+|=.. ..|+.+|.++.-+...+ ++..- +.+.....+++... ....
T Consensus 53 ~~~~~~~vLDvGCG~G~~~~~la~~g-----~~v~gvD~s~~~i~~Ar---~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 124 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF-----PRVIGLDVSKSALEIAA---KENTAANISYRLLDGLVPEQAAQIHSEIG 124 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS-----SCEEEEESCHHHHHHHH---HHSCCTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred HCCCCCEEEEECCCCCHHHHHHHCCC-----CEEEEEECCHHHHHHHH---HHCCCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 06999858997587978799976378-----45998509999999999---86746750699950136532222245667
Q ss_pred CCEEEECCCC------CHHHHHHHHHHHHCC
Q ss_conf 8699991479------989999984885206
Q gi|254780807|r 142 CDVISARALA------DLDTLLEYSFPWLYQ 166 (168)
Q Consensus 142 ~d~v~sRA~a------~l~~ll~~~~pllk~ 166 (168)
+++|++.++- ....+++-...+||+
T Consensus 125 d~~V~~~~~l~~l~~~d~~~~l~~~~r~Lkp 155 (245)
T 3ggd_A 125 DANIYMRTGFHHIPVEKRELLGQSLRILLGK 155 (245)
T ss_dssp SCEEEEESSSTTSCGGGHHHHHHHHHHHHTT
T ss_pred CEEEEEEECHHCCCHHHHHHHHHHHHHHCCC
T ss_conf 7799996222118817899999999988799