HHsearch results for GI: 254780807 and protein with PDBid: 3lpm_A
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.34 E-value=1.6e-06 Score=57.20 Aligned_cols=86 Identities=14% Similarity=0.196 Sum_probs=66.0
Q ss_pred HHHHHHHHHHCCC---CCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCC--CEEEECHH
Q ss_conf 6463564310012---344311111467733565652275546634787500003899999999973898--09980426
Q gi|254780807|r 58 HVEDSLRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRI 132 (168)
Q Consensus 58 Hi~DSl~~~~~~~---~~~~ilDiGSGaGfPGi~laI~~p~~~~~~v~Lves~~KK~~FL~~~~~~L~L~--~~vi~~r~ 132 (168)
--.|++.+..+.. .+.+++|+|+|.|.-++.+|- +++ ..|+.||.++.-+...++-++..++. ++++++.+
T Consensus 33 ~~~D~~lLa~~~~~~~~~~~vLDlG~G~G~~~l~la~-~~~---~~v~~vDi~~~~~~~A~~N~~~n~l~~~v~~~~~D~ 108 (259)
T 3lpm_A 33 FSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLST-RTK---AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDL 108 (259)
T ss_dssp CCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHT-TCC---CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCG
T ss_pred CCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHH-CCC---CEEEEEECCHHHHHHHHHHHHHCCCCHHHEEEEHHH
T ss_conf 6217999998850866799799972585899999986-789---889999998999999999998607330112330011
Q ss_pred HHHHHC--CCCCCEEEE
Q ss_conf 653312--479869999
Q gi|254780807|r 133 QEAPQM--ITTCDVISA 147 (168)
Q Consensus 133 e~~~~~--~~~~d~v~s 147 (168)
.++... .++||+|++
T Consensus 109 ~~~~~~~~~~~fD~Iv~ 125 (259)
T 3lpm_A 109 KKITDLIPKERADIVTC 125 (259)
T ss_dssp GGGGGTSCTTCEEEEEE
T ss_pred HHHHHCCCCCCCCEEEE
T ss_conf 10001035542547885