BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780807|ref|YP_003065220.1| glucose-inhibited division
protein B [Candidatus Liberibacter asiaticus str. psy62]
(168 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780807|ref|YP_003065220.1| glucose-inhibited division protein B [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040484|gb|ACT57280.1| glucose-inhibited division protein B [Candidatus Liberibacter
asiaticus str. psy62]
Length = 168
Score = 348 bits (892), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE
Sbjct: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK
Sbjct: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK
Sbjct: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
>gi|315122030|ref|YP_004062519.1| 16S rRNA methyltransferase GidB [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495432|gb|ADR52031.1| 16S rRNA methyltransferase GidB [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 176
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/120 (76%), Positives = 107/120 (89%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+VS STVEDFW RH+EDSLRVFQLHPY S+W+DLGSGGGFPGI+TSIQL+ I+GG VNLI
Sbjct: 1 MVSPSTVEDFWKRHIEDSLRVFQLHPYSSVWVDLGSGGGFPGIVTSIQLAEIKGGWVNLI 60
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
ES NKKA FLRYV+++T ARGKVF+CRIQEA ++I CD+ISARALA+LD LLEYSFPW
Sbjct: 61 ESNNKKAGFLRYVLKQTEARGKVFSCRIQEASKLIEKCDIISARALANLDILLEYSFPWF 120
>gi|150398395|ref|YP_001328862.1| 16S rRNA methyltransferase GidB [Sinorhizobium medicae WSM419]
gi|166224616|sp|A6UEE7|RSMG_SINMW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150029910|gb|ABR62027.1| methyltransferase GidB [Sinorhizobium medicae WSM419]
Length = 213
Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 115/152 (75%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
N LN VSRET+EKLE+F LF KW++ INLV+ ST++D W RH+ DS+++FQL P P
Sbjct: 6 NRALNGLRVSRETVEKLEHFASLFQKWARSINLVAPSTLDDLWRRHILDSIQLFQLSPAP 65
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+DLGSGGGFPG+IT+I LS E G V+L+ES NKKA+FLR +++TAARG V RI
Sbjct: 66 KTWVDLGSGGGFPGVITAICLSETESGWVHLVESNNKKAAFLRVALRETAARGTVHPIRI 125
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+EAP I TCD ISARAL+DL LLEY PW+
Sbjct: 126 EEAPAEIPTCDAISARALSDLSQLLEYCAPWM 157
>gi|15967089|ref|NP_387442.1| glucose-inhibited division protein B [Sinorhizobium meliloti 1021]
gi|307302551|ref|ZP_07582308.1| methyltransferase GidB [Sinorhizobium meliloti BL225C]
gi|307316118|ref|ZP_07595562.1| methyltransferase GidB [Sinorhizobium meliloti AK83]
gi|20177892|sp|Q92KW3|RSMG_RHIME RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15076362|emb|CAC47915.1| Probable glucose inhibited division protein B [Sinorhizobium
meliloti 1021]
gi|306897958|gb|EFN28700.1| methyltransferase GidB [Sinorhizobium meliloti AK83]
gi|306903221|gb|EFN33811.1| methyltransferase GidB [Sinorhizobium meliloti BL225C]
Length = 213
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 113/149 (75%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET++KLE+F LF KW++ INLV+ ST+ED W RH+ DSL+++QL P P W
Sbjct: 9 LNGLRVSRETVQKLEHFASLFQKWARSINLVAPSTLEDLWRRHILDSLQLYQLSPGPKTW 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I LS EGG V+L+ES NKKA+FLR +++T ARG V RI+ A
Sbjct: 69 VDLGSGGGFPGVITAICLSEAEGGWVHLVESNNKKAAFLRVALRETGARGSVHPIRIEAA 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P I +CD ISARALADL LL+Y PW+
Sbjct: 129 PAEIPSCDAISARALADLSQLLDYCAPWM 157
>gi|222087927|ref|YP_002546465.1| glucose inhibited division protein B [Agrobacterium radiobacter
K84]
gi|254766871|sp|B9JEW2|RSMG_AGRRK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221725375|gb|ACM28531.1| glucose inhibited division protein B [Agrobacterium radiobacter
K84]
Length = 205
Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 117/153 (76%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ STV+D W RH+ DS ++FQLHP P+ W
Sbjct: 3 LNGVRVSRETQGRLQHFAELFQKWAKTINLVAPSTVDDLWRRHIADSAQIFQLHPKPARW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPGIIT+I L+ + G V+L+ES KKA+FLR +++ ARG V A RI+EA
Sbjct: 63 VDLGSGGGFPGIITAILLAEQKDGHVDLVESNQKKAAFLRVCLRECEARGAVHAVRIEEA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P+++ CDVISARALA+LD LL+Y+ PW+ + +
Sbjct: 123 PKIVADCDVISARALAELDMLLDYAAPWVERNE 155
>gi|227823854|ref|YP_002827827.1| 16S rRNA methyltransferase GidB [Sinorhizobium fredii NGR234]
gi|254766900|sp|C3MB65|RSMG_RHISN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|227342856|gb|ACP27074.1| methyltransferase GidB [Sinorhizobium fredii NGR234]
Length = 214
Score = 190 bits (482), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/149 (58%), Positives = 111/149 (74%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ VSRETL+KLE+F LF KW+K INLV+ ST+ED W RH DSL+VF+L P+P W
Sbjct: 9 MKALRVSRETLDKLEHFAGLFQKWAKSINLVAPSTLEDLWQRHFVDSLQVFRLSPFPKTW 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I LS G V+L+ES NKKA+FLR + +T ARG V R+++A
Sbjct: 69 VDLGSGGGFPGVITAICLSEHADGWVHLVESNNKKAAFLRVALNETGARGSVHPIRVEQA 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P +I C+ ISARALADL LL+YS PW+
Sbjct: 129 PSVIPRCEAISARALADLTQLLDYSAPWM 157
>gi|209551500|ref|YP_002283417.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|226797828|sp|B5ZV45|RSMG_RHILW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209537256|gb|ACI57191.1| methyltransferase GidB [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 205
Score = 189 bits (481), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 115/153 (75%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ+HP P IW
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKTINLVAPSTLDDLWNRHIADSSQVFQIHPKPVIW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V + RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHSSRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
I C ISARALADLD LLEYS PW+ +K
Sbjct: 123 HAEIGECGAISARALADLDGLLEYSAPWMLGEK 155
>gi|116254461|ref|YP_770299.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv. viciae
3841]
gi|166224606|sp|Q1MA20|RSMG_RHIL3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115259109|emb|CAK10220.1| putative glucose inhibited division protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 205
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 114/153 (74%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ+HP P W
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKAINLVAPSTLDDLWHRHIADSSQVFQIHPQPITW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++GG V+L+ES +KKA+FLR +++T ARG V + RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQGGWVHLVESNHKKAAFLRTALRETNARGSVHSIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ C ISARAL DLD L+ YS PW+ K+
Sbjct: 123 YTEVRECSAISARALTDLDGLIGYSSPWMLGKE 155
>gi|86359699|ref|YP_471591.1| glucose-inhibited division protein B [Rhizobium etli CFN 42]
gi|123510387|sp|Q2K2S2|RSMG_RHIEC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86283801|gb|ABC92864.1| glucose inhibited division protein B [Rhizobium etli CFN 42]
Length = 205
Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 113/153 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++ W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQGRLQHFALLFQKWAKTINLVAPSTLDALWHRHIADSSQIFQICPRPVTW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++GG V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQGGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
I CD ISARALADLD L+ YS PW+ K+
Sbjct: 123 SAEIGDCDAISARALADLDGLIAYSAPWMLGKE 155
>gi|218682745|ref|ZP_03530346.1| glucose-inhibited division protein B [Rhizobium etli CIAT 894]
Length = 205
Score = 182 bits (463), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 112/149 (75%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV++ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKTINLVAASTLDDLWHRHIADSSQIFQIQPQPITW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T AR V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIYLAELQDGWVHLVESNHKKAAFLRTALRETNARASVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P I CD ISARALA+LD L+ YS W+
Sbjct: 123 PTEIGECDAISARALAELDGLIGYSAAWM 151
>gi|15890075|ref|NP_355756.1| glucose-inhibited division protein B [Agrobacterium tumefaciens
str. C58]
gi|22095725|sp|Q8UBM1|RSMG_AGRT5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15158060|gb|AAK88541.1| glucose inhibited division protein [Agrobacterium tumefaciens str.
C58]
Length = 205
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 109/148 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+N +VSRET E+LE+F LF KW+K NLV+ ST+ + W RHV DS ++FQL P P W
Sbjct: 3 INGQSVSRETQERLEHFVELFKKWNKTTNLVAPSTLTELWSRHVADSAQIFQLSPQPKKW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I L+ + G V+L+ES NKKA+FLR +++T ARG V RI+ A
Sbjct: 63 IDLGSGGGFPGVITAIFLAELGDGWVDLVESNNKKAAFLRIALKETGARGAVHPVRIETA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
++ITTC+ +SARALADLD L Y PW
Sbjct: 123 SEIITTCNAVSARALADLDLLFGYIHPW 150
>gi|241206938|ref|YP_002978034.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860828|gb|ACS58495.1| methyltransferase GidB [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 205
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 114/153 (74%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ++P W
Sbjct: 3 LNGLRVSRETQERLQHFAVLFQKWAKAINLVAPSTLDDLWHRHIADSSQVFQINPQAISW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELKDGWVHLVESNHKKAAFLRTALRETNARGSVHILRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ CD ISARALADLD L+EYS PW+ K+
Sbjct: 123 YAGVGECDAISARALADLDGLIEYSAPWMLGKE 155
>gi|325294200|ref|YP_004280064.1| 16S rRNA methyltransferase GidB [Agrobacterium sp. H13-3]
gi|325062053|gb|ADY65744.1| 16S rRNA methyltransferase GidB [Agrobacterium sp. H13-3]
Length = 205
Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 109/148 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+N +VSRET E+LE+F LF KW+K NLV+ ST+ + W RHV DS ++FQL P P W
Sbjct: 3 INGQSVSRETQERLEHFVELFKKWNKTTNLVAPSTLTELWSRHVADSAQIFQLAPQPQKW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I L+ + G V+L+ES NKK +FLR +++T ARG V + RI++A
Sbjct: 63 IDLGSGGGFPGVITAIFLAELGDGWVDLVESNNKKPAFLRIALKETGARGAVHSVRIEKA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
P+ + CD ISARALA+++ L EY PW
Sbjct: 123 PETVENCDAISARALAEMNLLFEYIHPW 150
>gi|222150244|ref|YP_002551201.1| 16S rRNA methyltransferase GidB [Agrobacterium vitis S4]
gi|254766872|sp|B9JV51|RSMG_AGRVS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221737226|gb|ACM38189.1| glucose inhibited division protein [Agrobacterium vitis S4]
Length = 211
Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 109/153 (71%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET EKL++F LF KWSK INLV++ST + W RHV DS ++F+L P P W
Sbjct: 9 LTGLRVSRETYEKLDHFVDLFGKWSKVINLVANSTKDQIWHRHVIDSAQLFKLRPNPQHW 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I LS G V+L+ES NKKA+FLR + +T ARG+V RI+EA
Sbjct: 69 IDLGSGGGFPGVITAILLSEKSDGWVDLVESNNKKAAFLRTALMETGARGRVHPVRIEEA 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ ++ CD ISARALADLD L Y+ PW + K
Sbjct: 129 HKSLSDCDTISARALADLDLLFSYASPWAEKNK 161
>gi|218463269|ref|ZP_03503360.1| glucose-inhibited division protein B [Rhizobium etli Kim 5]
Length = 205
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 112/152 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ++P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKAINLVAPSTLDDLWRRHIADSSQIFQIYPEPVRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
I C ISARALADLD L+ Y+ PW+ K
Sbjct: 123 HAEIGECGAISARALADLDGLIGYAAPWMLGK 154
>gi|327191202|gb|EGE58245.1| glucose-inhibited division protein B [Rhizobium etli CNPAF512]
Length = 205
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 112/153 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETRARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADL+ L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLNGLIGYAAPWMLGKE 155
>gi|218516416|ref|ZP_03513256.1| glucose-inhibited division protein B [Rhizobium etli 8C-3]
Length = 205
Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 111/153 (72%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FL +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLMTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADLD L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLDGLIGYAAPWMLGKE 155
>gi|190893977|ref|YP_001980519.1| glucose inhibited division protein B [Rhizobium etli CIAT 652]
gi|238692505|sp|B3PS51|RSMG_RHIE6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190699256|gb|ACE93341.1| glucose inhibited division protein B [Rhizobium etli CIAT 652]
Length = 205
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 110/153 (71%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G +L+ES +KKA+FL +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWAHLVESNHKKAAFLMTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADLD L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLDGLIGYAAPWMLGKE 155
>gi|163757463|ref|ZP_02164552.1| glucose-inhibited division protein B [Hoeflea phototrophica DFL-43]
gi|162284965|gb|EDQ35247.1| glucose-inhibited division protein B [Hoeflea phototrophica DFL-43]
Length = 208
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 100/152 (65%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
Y L++ VSRET E+LE + L KW +INL+S T+ D W RH+ DSL++F L P P
Sbjct: 3 QYPLDSGFVSRETRERLETYADLVRKWQSRINLISPKTLPDLWNRHIIDSLQLFALKPQP 62
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+D+GSG GFPG++T+I L+ I G V+L+ES NKKA+FLR V+ +T AR V RI
Sbjct: 63 VQWMDIGSGAGFPGLVTAICLTEIGEGWVHLVESNNKKAAFLRQVIGQTGARASVLPIRI 122
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + + D ISARALA L LL + P++
Sbjct: 123 DAARAKVGSMDAISARALASLPDLLSHCAPFV 154
>gi|121602548|ref|YP_988351.1| glucose-inhibited division protein B [Bartonella bacilliformis
KC583]
gi|166224576|sp|A1UQU8|RSMG_BARBK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120614725|gb|ABM45326.1| methyltransferase GidB [Bartonella bacilliformis KC583]
Length = 215
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 15 LLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
LLN +VSRET+E L F L ++W+ INL+S++TV W RH+ DS +++ L+
Sbjct: 12 LLNMLPSVSRETMENLIQFESLIIQWNAHINLISAATVPFLWTRHILDSAQIYPLYSQCL 71
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W DLGSGGGFP I+ +I L + G ++LIES KK +FLR V+ + V+ CRI+
Sbjct: 72 HWCDLGSGGGFPAIVIAIFLKEKQKGHIDLIESNGKKVAFLRTVIAQLNLPATVYHCRIE 131
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ Q I ++I+AR LA L+TLL+ +FPWL QK
Sbjct: 132 DVYQKINAPEIITARGLASLNTLLQLTFPWLKQK 165
>gi|260467201|ref|ZP_05813378.1| methyltransferase GidB [Mesorhizobium opportunistum WSM2075]
gi|259029054|gb|EEW30353.1| methyltransferase GidB [Mesorhizobium opportunistum WSM2075]
Length = 208
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 98/144 (68%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++ +L P W+D+GS
Sbjct: 14 VSRETFDRLVAFEEIFQKWNRSINLVAQSTSGDVWQRHILDSAQLARLEPDAKRWVDIGS 73
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ +G ++L+ES KKASFL+ VV + + +V A RI E+ +++
Sbjct: 74 GGGFPGLVMAFLLAERDGASIDLVESNRKKASFLQAVVGQFSLPARVVARRIDESHALVS 133
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T +++ARALA L TLL+ S PWL
Sbjct: 134 TPQIVTARALASLPTLLDLSAPWL 157
>gi|319780614|ref|YP_004140090.1| methyltransferase GidB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166502|gb|ADV10040.1| methyltransferase GidB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 210
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 99/144 (68%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++ ++ P + W+D+GS
Sbjct: 16 VSRETFDRLVAFEQMFQKWNRSINLVAQSTSGDVWQRHILDSAQLARIEPAATRWVDIGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ +G ++L+ES KKASFL+ V+ + + +V A RI ++ +++
Sbjct: 76 GGGFPGLVMAFLLAERDGASIDLVESNRKKASFLQTVIGQFSLPARVVARRIDDSHALVS 135
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T +++ARALA L TLL+ S PWL
Sbjct: 136 TPQIVTARALAPLSTLLDLSAPWL 159
>gi|240851401|ref|YP_002972804.1| glucose inhibited division protein B [Bartonella grahamii as4aup]
gi|240268524|gb|ACS52112.1| glucose inhibited division protein B [Bartonella grahamii as4aup]
Length = 215
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Query: 15 LLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
LLN +VSRET+E L F L L+W+ INL+S++T+ D W RH+ DS ++F L+ +
Sbjct: 12 LLNIVPSVSRETMENLIQFESLILQWNAHINLISATTIPDLWTRHILDSAQIFPLYAHSL 71
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W DLGSGGGFP I+ +I L + G +NL+ES KK +FLR V+ + V+ RI+
Sbjct: 72 HWCDLGSGGGFPAIVIAIFLKEKKVGHINLVESSGKKVAFLRTVIAQLNLPATVYHARIE 131
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ Q I D+I+AR LA L++LL+ FP L +K
Sbjct: 132 DVYQKIPASDIITARGLAPLNSLLQLIFPLLTEK 165
>gi|49476316|ref|YP_034357.1| glucose-inhibited division protein B [Bartonella henselae str.
Houston-1]
gi|55976398|sp|Q6G1L0|RSMG_BARHE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49239124|emb|CAF28428.1| Glucose inhibited division protein b [Bartonella henselae str.
Houston-1]
Length = 215
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 95/148 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L +F L ++W+K INL+SSST+ W RH+ DS +++ LH W DLG
Sbjct: 18 SVSRETMQDLMHFESLIIQWNKHINLISSSTIPLLWTRHILDSAQIYPLHSDLLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I + + G ++L+ES KK +FLR V+ + V+ CRI++ Q I
Sbjct: 78 SGGGFPAIVIAIFMKEKKTGHIDLVESNGKKVAFLRTVIAQLDLPATVYHCRIEDVTQKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
+VI+AR LA LD LL FP L QK
Sbjct: 138 KNPEVITARGLACLDDLLRLIFPLLTQK 165
>gi|239833101|ref|ZP_04681430.1| methyltransferase GidB [Ochrobactrum intermedium LMG 3301]
gi|239825368|gb|EEQ96936.1| methyltransferase GidB [Ochrobactrum intermedium LMG 3301]
Length = 213
Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 92/146 (63%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ + W RH+ DS ++F L W+D+GS
Sbjct: 17 VSRETADRLIAFEELFRKWSKAINLASPSTLNELWTRHILDSAQLFPLARDVRNWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++LIES KKA+FLR +V + RI+ Q I
Sbjct: 77 GGGFPGIVTACFLAEQPGGAIDLIESAGKKAAFLRTAAGHLNVPARVHSARIETMWQKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T DV++ARALA LD L + PWL +
Sbjct: 137 TPDVVTARALASLDDLFGLTEPWLTR 162
>gi|319407870|emb|CBI81523.1| glucose inhibited division protein B [Bartonella sp. 1-1C]
Length = 219
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 94/148 (63%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L F L ++W+ INL+S++T+ W RH+ DS +++ L W DLG
Sbjct: 18 SVSRETMKHLIEFESLVIQWNIHINLISATTIPVLWKRHILDSAQIYPLKSQFLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L +GG ++L+ES KKA+FLR V+ K V CRI+ + I
Sbjct: 78 SGGGFPAIVLAILLKEKKGGHIDLVESNGKKAAFLRNVIAKLNLPATVHHCRIENVYKKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
T D+++AR LA LDTLL PWL QK
Sbjct: 138 KTPDILTARGLASLDTLLHLMSPWLTQK 165
>gi|163869377|ref|YP_001610633.1| 16S rRNA methyltransferase GidB [Bartonella tribocorum CIP 105476]
gi|189039482|sp|A9IZX8|RSMG_BART1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161019080|emb|CAK02638.1| glucose inhibited division protein B [Bartonella tribocorum CIP
105476]
Length = 213
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 93/148 (62%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET+E L F L L+W+ INL+S++T+ D W RH+ DS ++F L + W DLG
Sbjct: 18 SVSRETMENLIQFESLILQWNAHINLISAATIPDLWTRHILDSAQIFPLCSHSLQWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L G +NL+ES KK +FLR V+ + V+ RI++ Q I
Sbjct: 78 SGGGFPAIVIAIFLKEKRSGHINLVESNGKKVAFLRTVIAQLNLPATVYHARIEDIYQKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+I+AR LA L+ LL+ FP L +K
Sbjct: 138 PISDIITARGLAPLNELLQLIFPLLTEK 165
>gi|319406396|emb|CBI80037.1| glucose inhibited division protein B [Bartonella sp. AR 15-3]
Length = 219
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 95/148 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L F L ++W+ INL+S++T+ W RH+ DS +++ L W DLG
Sbjct: 18 SVSRETIKHLIEFETLVIQWNIHINLISATTIPILWTRHILDSAQIYPLKSQFLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L +GG ++L+ES KKA+FLR V+ + V CRI++ + I
Sbjct: 78 SGGGFPAIVIAIFLKEKKGGHIDLVESNGKKAAFLRNVIAQLNLPATVHHCRIEDVYEKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+++AR LA LDTLL + PWL QK
Sbjct: 138 KKPDILTARGLASLDTLLHFMSPWLTQK 165
>gi|319899516|ref|YP_004159613.1| glucose inhibited division protein B [Bartonella clarridgeiae 73]
gi|319403484|emb|CBI77064.1| glucose inhibited division protein B [Bartonella clarridgeiae 73]
Length = 219
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 95/148 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L F L ++W+K +NL+S++T+ W RH+ DS +++ L W DLG
Sbjct: 18 SVSRETMKLLIQFESLVIQWNKHVNLISAATIPVLWTRHILDSAQIYPLKSQSLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L +GG ++L+ES KK +FLR V+ + V CR+++ + I
Sbjct: 78 SGGGFPAIVIAIFLKEKKGGHIDLVESNGKKVAFLRNVIAQLNLPATVHHCRVEDVYKKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+++AR LA LDTLL+ PWL QK
Sbjct: 138 KAPDILTARGLASLDTLLQLMSPWLTQK 165
>gi|148559599|ref|YP_001259865.1| 16S rRNA methyltransferase GidB [Brucella ovis ATCC 25840]
gi|166224577|sp|A5VT18|RSMG_BRUO2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148370856|gb|ABQ60835.1| methyltransferase GidB [Brucella ovis ATCC 25840]
Length = 213
Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 91/144 (63%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS+++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSVQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|49474827|ref|YP_032869.1| glucose-inhibited division protein B [Bartonella quintana str.
Toulouse]
gi|55976397|sp|Q6FYC0|RSMG_BARQU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49240331|emb|CAF26813.1| Glucose inhibited division protein b [Bartonella quintana str.
Toulouse]
Length = 215
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS ET+ L F L L+W+ INL+S++T+ WIRH+ DS +++ LH W DLGS
Sbjct: 19 VSHETMNDLIQFESLILQWNAHINLISAATIPVLWIRHILDSAQIYPLHSNFLHWCDLGS 78
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFP I+ +I L + + G ++L+ES KK +FLR V+ + V CRI++ Q I
Sbjct: 79 GGGFPAIVIAIFLKTKKAGHIDLVESNGKKIAFLRTVISQLNLPATVHHCRIEDVYQKIK 138
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
DVI+AR LA LD LL+ FP L QK
Sbjct: 139 KPDVITARGLACLDELLQLIFPLLTQK 165
>gi|319404910|emb|CBI78511.1| glucose inhibited division protein B [Bartonella rochalimae ATCC
BAA-1498]
Length = 219
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 95/148 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L F L ++W+ INL+S++T+ W RH+ DS +++ L W DLG
Sbjct: 18 SVSRETMKHLIEFESLVIQWNIHINLISATTIPVLWKRHILDSAQIYPLKSQFLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L +GG ++L+ES KKA+FL+ V+ K V CRI++ + I
Sbjct: 78 SGGGFPAIVLAIFLKEKKGGHIDLVESNGKKAAFLQNVIAKLNLPATVHHCRIEDVYKKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
T D+++AR LA LDTLL PWL QK
Sbjct: 138 KTPDILTARGLASLDTLLHLMSPWLTQK 165
>gi|306842825|ref|ZP_07475465.1| methyltransferase GidB [Brucella sp. BO2]
gi|306287019|gb|EFM58530.1| methyltransferase GidB [Brucella sp. BO2]
Length = 213
Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKDATCWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++++ES KKA+FLR +V A RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPGGSIDMVESAGKKAAFLRTAAGHLHVPARVHAARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|256060024|ref|ZP_05450206.1| 16S rRNA methyltransferase GidB [Brucella neotomae 5K33]
gi|261324001|ref|ZP_05963198.1| ribosomal RNA small subunit methyltransferase G [Brucella neotomae
5K33]
gi|261299981|gb|EEY03478.1| ribosomal RNA small subunit methyltransferase G [Brucella neotomae
5K33]
Length = 213
Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|254694682|ref|ZP_05156510.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 3 str. Tulya]
gi|261215010|ref|ZP_05929291.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 3 str. Tulya]
gi|260916617|gb|EEX83478.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 3 str. Tulya]
Length = 213
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKATFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|225626439|ref|ZP_03784478.1| methyltransferase GidB [Brucella ceti str. Cudo]
gi|260169467|ref|ZP_05756278.1| 16S rRNA methyltransferase GidB [Brucella sp. F5/99]
gi|261758994|ref|ZP_06002703.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
F5/99]
gi|225618096|gb|EEH15139.1| methyltransferase GidB [Brucella ceti str. Cudo]
gi|261738978|gb|EEY26974.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
F5/99]
Length = 213
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|17986292|ref|NP_538926.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 1 str.
16M]
gi|62290904|ref|YP_222697.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 1 str. 9-941]
gi|82700815|ref|YP_415389.1| 16S rRNA methyltransferase GidB [Brucella melitensis biovar Abortus
2308]
gi|161619974|ref|YP_001593861.1| glucose-inhibited division protein B [Brucella canis ATCC 23365]
gi|163844078|ref|YP_001628482.1| glucose-inhibited division protein B [Brucella suis ATCC 23445]
gi|189025117|ref|YP_001935885.1| 16S rRNA methyltransferase GidB [Brucella abortus S19]
gi|225853491|ref|YP_002733724.1| 16S rRNA methyltransferase GidB [Brucella melitensis ATCC 23457]
gi|254696309|ref|ZP_05158137.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 2 str.
86/8/59]
gi|254705061|ref|ZP_05166889.1| 16S rRNA methyltransferase GidB [Brucella suis bv. 3 str. 686]
gi|254707421|ref|ZP_05169249.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis M163/99/10]
gi|254709037|ref|ZP_05170848.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis B2/94]
gi|254731225|ref|ZP_05189803.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 4 str. 292]
gi|256030562|ref|ZP_05444176.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis M292/94/1]
gi|256112384|ref|ZP_05453305.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 3 str.
Ether]
gi|256158558|ref|ZP_05456448.1| 16S rRNA methyltransferase GidB [Brucella ceti M490/95/1]
gi|256253967|ref|ZP_05459503.1| 16S rRNA methyltransferase GidB [Brucella ceti B1/94]
gi|256263029|ref|ZP_05465561.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 2 str. 63/9]
gi|256370458|ref|YP_003107969.1| glucose-inhibited division protein B [Brucella microti CCM 4915]
gi|260546165|ref|ZP_05821905.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
NCTC 8038]
gi|260562964|ref|ZP_05833450.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. 16M]
gi|260567470|ref|ZP_05837940.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
4 str. 40]
gi|260758957|ref|ZP_05871305.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 4 str. 292]
gi|260760680|ref|ZP_05873023.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 2 str. 86/8/59]
gi|261221109|ref|ZP_05935390.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
B1/94]
gi|261314906|ref|ZP_05954103.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M163/99/10]
gi|261316536|ref|ZP_05955733.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis B2/94]
gi|261755764|ref|ZP_05999473.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
3 str. 686]
gi|265987610|ref|ZP_06100167.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M292/94/1]
gi|265993819|ref|ZP_06106376.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 3 str. Ether]
gi|265997070|ref|ZP_06109627.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M490/95/1]
gi|294851289|ref|ZP_06791962.1| 16S rRNA methyltransferase GidB [Brucella sp. NVSL 07-0026]
gi|20177888|sp|Q8YJS4|RSMG_BRUME RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75496087|sp|Q57AJ8|RSMG_BRUAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123547325|sp|Q2YR13|RSMG_BRUA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039486|sp|A9M9E3|RSMG_BRUC2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039487|sp|B0CJG0|RSMG_BRUSI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238689412|sp|B2S959|RSMG_BRUA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766885|sp|C0RFU8|RSMG_BRUMB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17981874|gb|AAL51190.1| glucose inhibited division protein b [Brucella melitensis bv. 1
str. 16M]
gi|62197036|gb|AAX75336.1| GidB, glucose-inhibited division protein B [Brucella abortus bv. 1
str. 9-941]
gi|82616916|emb|CAJ12017.1| Glucose inhibited division protein [Brucella melitensis biovar
Abortus 2308]
gi|161336785|gb|ABX63090.1| methyltransferase GidB [Brucella canis ATCC 23365]
gi|163674801|gb|ABY38912.1| methyltransferase GidB [Brucella suis ATCC 23445]
gi|189020689|gb|ACD73411.1| Glucose inhibited division protein [Brucella abortus S19]
gi|225641856|gb|ACO01770.1| methyltransferase GidB [Brucella melitensis ATCC 23457]
gi|256000621|gb|ACU49020.1| glucose-inhibited division protein B [Brucella microti CCM 4915]
gi|260096272|gb|EEW80148.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
NCTC 8038]
gi|260152980|gb|EEW88072.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. 16M]
gi|260156988|gb|EEW92068.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
4 str. 40]
gi|260669275|gb|EEX56215.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 4 str. 292]
gi|260671112|gb|EEX57933.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 2 str. 86/8/59]
gi|260919693|gb|EEX86346.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
B1/94]
gi|261295759|gb|EEX99255.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis B2/94]
gi|261303932|gb|EEY07429.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M163/99/10]
gi|261745517|gb|EEY33443.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
3 str. 686]
gi|262551538|gb|EEZ07528.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M490/95/1]
gi|262764800|gb|EEZ10721.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 3 str. Ether]
gi|263092902|gb|EEZ17077.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 2 str. 63/9]
gi|264659807|gb|EEZ30068.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M292/94/1]
gi|294819878|gb|EFG36877.1| 16S rRNA methyltransferase GidB [Brucella sp. NVSL 07-0026]
gi|326410055|gb|ADZ67120.1| Glucose inhibited division protein [Brucella melitensis M28]
gi|326539772|gb|ADZ87987.1| methyltransferase GidB [Brucella melitensis M5-90]
Length = 213
Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|163737992|ref|ZP_02145408.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
gi|161388608|gb|EDQ12961.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
Length = 204
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 98/146 (67%), Gaps = 3/146 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ +VSRET ++L+++ L KWS KINL++ ST++D W RH+ DS+++ Q +P W
Sbjct: 6 IGEAHVSRETYDRLKHYESLVKKWSPKINLIAKSTLDDVWDRHIVDSVQICQGMDFPQTW 65
Query: 76 IDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSGGGFPG++ +I + ++ LIES +K +FLR +++ A KV + RI++
Sbjct: 66 LDIGSGGGFPGVVVAILAAERAPDCVITLIESDQRKCAFLRTAIRECGANAKVVSERIEK 125
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
P M DVISARALADL TLL ++
Sbjct: 126 VPPM--AADVISARALADLTTLLGFA 149
>gi|254690192|ref|ZP_05153446.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 6 str. 870]
gi|256258446|ref|ZP_05463982.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 9 str. C68]
gi|260755733|ref|ZP_05868081.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 6 str. 870]
gi|260884759|ref|ZP_05896373.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 9 str. C68]
gi|297247288|ref|ZP_06931006.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 5 str. B3196]
gi|260675841|gb|EEX62662.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 6 str. 870]
gi|260874287|gb|EEX81356.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 9 str. C68]
gi|297174457|gb|EFH33804.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 5 str. B3196]
Length = 213
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|254713537|ref|ZP_05175348.1| 16S rRNA methyltransferase GidB [Brucella ceti M644/93/1]
gi|254716108|ref|ZP_05177919.1| 16S rRNA methyltransferase GidB [Brucella ceti M13/05/1]
gi|261217879|ref|ZP_05932160.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M13/05/1]
gi|261321271|ref|ZP_05960468.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M644/93/1]
gi|260922968|gb|EEX89536.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M13/05/1]
gi|261293961|gb|EEX97457.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M644/93/1]
Length = 213
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIKSMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|23502908|ref|NP_699035.1| 16S rRNA methyltransferase GidB [Brucella suis 1330]
gi|29336737|sp|Q8FY29|RSMG_BRUSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|23348939|gb|AAN30950.1| glucose-inhibited division protein B [Brucella suis 1330]
Length = 213
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 90/144 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLYVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|306843476|ref|ZP_07476077.1| methyltransferase GidB [Brucella sp. BO1]
gi|306276167|gb|EFM57867.1| methyltransferase GidB [Brucella sp. BO1]
Length = 213
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 91/144 (63%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS+++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLVDLWNRHILDSVQLFPLAKDATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|312115376|ref|YP_004012972.1| methyltransferase GidB [Rhodomicrobium vannielii ATCC 17100]
gi|311220505|gb|ADP71873.1| methyltransferase GidB [Rhodomicrobium vannielii ATCC 17100]
Length = 226
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
I A T+ VS ET+EKLE + L ++W K +NLV+ T+ W RH DS ++ L
Sbjct: 12 IKSAAEFARTFRVSHETVEKLELYEKLLMQWQKAVNLVAPKTIPQIWQRHFADSAQLVAL 71
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P W+DLGSGGGFPG+ +I +++ E V+L+ES +K +FL V ++T A +V
Sbjct: 72 APGARTWVDLGSGGGFPGLAIAIMIANQKECACVHLVESNARKCAFLSEVARRTGAPARV 131
Query: 128 FACRIQEAPQM--ITTCDVISARALADLDTLLEYSFPW 163
RI +A M + DV++ARALA LD LLE + P+
Sbjct: 132 HNMRIADAAAMGAVPVADVVTARALASLDALLELALPF 169
>gi|13473774|ref|NP_105342.1| 16S rRNA methyltransferase GidB [Mesorhizobium loti MAFF303099]
gi|20177897|sp|Q98DZ2|RSMG_RHILO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14024525|dbj|BAB51128.1| glucose inhibited division protein B; GidB [Mesorhizobium loti
MAFF303099]
Length = 210
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 94/144 (65%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++ ++ P + W+D+GS
Sbjct: 16 VSRETFDRLVAFEAMFQKWNRSINLVAQSTAGDVWQRHILDSAQLARIEPNATHWVDIGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ G ++L+E KKASFL+ V+ + +V A RI+++ ++
Sbjct: 76 GGGFPGLVMAFLLAERAGASIDLVECNRKKASFLQTVIGQFNLPARVVARRIKDSHALVP 135
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
+++ARALA L LLE + PWL
Sbjct: 136 QPQIVTARALASLSVLLELTAPWL 159
>gi|254700690|ref|ZP_05162518.1| 16S rRNA methyltransferase GidB [Brucella suis bv. 5 str. 513]
gi|261751199|ref|ZP_05994908.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
5 str. 513]
gi|261740952|gb|EEY28878.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
5 str. 513]
Length = 213
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 89/144 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
V++ARALA L L + PWL
Sbjct: 137 IPQVVTARALASLGDLFTLAEPWL 160
>gi|163742612|ref|ZP_02149998.1| glucose-inhibited division protein B [Phaeobacter gallaeciensis
2.10]
gi|161384197|gb|EDQ08580.1| glucose-inhibited division protein B [Phaeobacter gallaeciensis
2.10]
Length = 204
Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 98/146 (67%), Gaps = 3/146 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ +VSRET ++L+++ L KWS KINL++ ST++D W RH+ DS+++ Q +P W
Sbjct: 6 IGEAHVSRETYDRLKHYESLVKKWSPKINLIAKSTLDDVWDRHIVDSVQICQGIDFPQTW 65
Query: 76 IDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSGGGFPG++ +I + ++ LIES +K +FLR +++ + KV + RI++
Sbjct: 66 LDIGSGGGFPGVVIAILAAERAPDCVITLIESDQRKCAFLRTAIRECGVKAKVVSERIEK 125
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
P M D+ISARALADL TLL ++
Sbjct: 126 VPPM--AADIISARALADLTTLLGFA 149
>gi|254718102|ref|ZP_05179913.1| 16S rRNA methyltransferase GidB [Brucella sp. 83/13]
gi|265983055|ref|ZP_06095790.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
83/13]
gi|306839727|ref|ZP_07472529.1| methyltransferase GidB [Brucella sp. NF 2653]
gi|264661647|gb|EEZ31908.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
83/13]
gi|306405187|gb|EFM61464.1| methyltransferase GidB [Brucella sp. NF 2653]
Length = 213
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 89/144 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLITFEDLFRKWSKAINLASPSTLSDLWNRHILDSAQLFPLAKDATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ G ++L+ES KKA+FLR +V A RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPDGCIDLVESAGKKAAFLRTASGHLHVPARVHAARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|254477561|ref|ZP_05090947.1| methyltransferase GidB [Ruegeria sp. R11]
gi|214031804|gb|EEB72639.1| methyltransferase GidB [Ruegeria sp. R11]
Length = 204
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET ++L+++ L KWS KINLV+ ST+ED W RH+ DS++V L +P W+D+G
Sbjct: 10 DVSRETYDRLKHYESLVQKWSPKINLVAKSTLEDVWERHIVDSVQVCDLVSFPETWVDIG 69
Query: 80 SGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFPG++ +I V LIES +K +FLR +++ RG+V + RI++ M
Sbjct: 70 SGGGFPGVVVAIVAAEKAPDCQVTLIESDQRKCAFLRTALRECGVRGRVISDRIEKVAPM 129
Query: 139 ITTCDVISARALADLDTLLEYS 160
V+SARALADL LLE++
Sbjct: 130 --GAGVLSARALADLSLLLEFA 149
>gi|254466952|ref|ZP_05080363.1| methyltransferase GidB [Rhodobacterales bacterium Y4I]
gi|206687860|gb|EDZ48342.1| methyltransferase GidB [Rhodobacterales bacterium Y4I]
Length = 205
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 99/149 (66%), Gaps = 7/149 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L NVSRETL +LE F + KW+ KINLVS S++E W RH+ DS++VF+ P
Sbjct: 6 ILEELNVSRETLARLEAFEQVIKKWNPKINLVSKSSLELLWSRHIADSVQVFRCVDAPDH 65
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLV--NLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+D+GSGGGFPG+I SI L++ E + LIES +K++FLR ++ A+ V + RI
Sbjct: 66 WVDIGSGGGFPGLIVSI-LAADEAPEMKTTLIESDQRKSAFLRTAARECGAKVTVISKRI 124
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYS 160
+ A PQ +V+SARALADL LLE+S
Sbjct: 125 EHADPQ---NAEVLSARALADLSLLLEFS 150
>gi|256045662|ref|ZP_05448540.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992084|ref|ZP_06104641.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. Rev.1]
gi|263003150|gb|EEZ15443.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. Rev.1]
Length = 213
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 89/144 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGF GI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFRGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWL 160
>gi|182678270|ref|YP_001832416.1| methyltransferase GidB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634153|gb|ACB94927.1| methyltransferase GidB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 221
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+++ E E+L + L KW K INLV+ ST++ W RH DSL+V + P W+DLG
Sbjct: 28 SMAPELRERLGLYATLLGKWQKTINLVAPSTLDHVWSRHFADSLQVQEALPQAHHWVDLG 87
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG++T+I L+ + V+LIES +K +FLR V ++T A+ V RI+ +I
Sbjct: 88 SGGGFPGLVTAIVLADVPEACVHLIESDQRKCAFLREVARETGAKAIVHCGRIEAVASII 147
Query: 140 TT-CDVISARALADLDTLLEYSFPWLYQ 166
+ +SARALA L LL Y+ PWL Q
Sbjct: 148 EDGIEAVSARALAPLVNLLAYAEPWLVQ 175
>gi|218670489|ref|ZP_03520160.1| glucose-inhibited division protein B [Rhizobium etli GR56]
Length = 156
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 80/105 (76%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++FQ++P P W+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T A
Sbjct: 2 QIFQIYPEPVRWVDLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNA 61
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
RG V A RI++A I CD ISARALADLD L+ Y+ PW+ K+
Sbjct: 62 RGSVHAIRIEDAHAEIGECDAISARALADLDGLIGYAAPWMLGKE 106
>gi|260431966|ref|ZP_05785937.1| 16S rRNA methyltransferase GidB [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415794|gb|EEX09053.1| 16S rRNA methyltransferase GidB [Silicibacter lacuscaerulensis
ITI-1157]
Length = 207
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ NVSRETL++L + L KW++KINLVS ST+ + W RH+ DS++VFQ + W+
Sbjct: 10 DNLNVSRETLDRLRLYVDLLEKWNRKINLVSRSTLSEAWSRHILDSIQVFQQVDHFDRWV 69
Query: 77 DLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG++ + I S L+ES +K++FLR V+++T A V + RI+
Sbjct: 70 DLGSGGGFPGLVCAVIATESWPDAQFTLVESDQRKSAFLRTVIRETGANCTVVSKRIEAV 129
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ DV+SARALADL TLL Y L Q
Sbjct: 130 DRL--EADVLSARALADLPTLLSYCERHLRQ 158
>gi|153008196|ref|YP_001369411.1| 16S rRNA methyltransferase GidB [Ochrobactrum anthropi ATCC 49188]
gi|166224600|sp|A6WX78|RSMG_OCHA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151560084|gb|ABS13582.1| methyltransferase GidB [Ochrobactrum anthropi ATCC 49188]
Length = 213
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 88/144 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L F LF KWSK INL S ST+ + W RH+ DS ++F L W+D+GS
Sbjct: 17 VSRETANRLIAFEDLFRKWSKAINLASPSTLNELWTRHILDSAQLFPLASDAKHWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++LIES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAEQPGGAIDLIESAGKKAAFLRTAAGHLHVPARVHSTRIEAMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T V++ARALA L+ L + WL
Sbjct: 137 TPQVVTARALASLNDLFGLTELWL 160
>gi|85706895|ref|ZP_01037985.1| glucose-inhibited division protein B [Roseovarius sp. 217]
gi|85668506|gb|EAQ23377.1| glucose-inhibited division protein B [Roseovarius sp. 217]
Length = 201
Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 98/145 (67%), Gaps = 8/145 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRET E+L+ + L +KW+ +INLVS ++++ W RH DS +++ L P+P W+DL
Sbjct: 6 DVSRETQERLKVYADLLVKWNPRINLVSKASLDQMWTRHFADSAQIYDLAPHPVEHWVDL 65
Query: 79 GSGGGFPGIITSIQLSSIEGG--LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA- 135
GSGGGFPG++ ++ L+ G + LIES +KA+FLR V+++T A V RI+ A
Sbjct: 66 GSGGGFPGLVVAV-LAQETGSPDRMTLIESDARKAAFLRVVIRETGAAATVLNERIETAE 124
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
PQ T V+SARALADLD LL ++
Sbjct: 125 PQAAT---VLSARALADLDGLLAFA 146
>gi|298293754|ref|YP_003695693.1| methyltransferase GidB [Starkeya novella DSM 506]
gi|296930265|gb|ADH91074.1| methyltransferase GidB [Starkeya novella DSM 506]
Length = 217
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 4/167 (2%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M DS+ RA L VSRET ++L L KW + INLV+ +T+ W RHV
Sbjct: 1 MNASDSSDRARA---LRLTPVSRETEDRLVAIVALLEKWQRTINLVAPATLPVVWTRHVA 57
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL++ L + W+DLGSGGGFPG++ + L+ G V L+ES ++KA+FLR +
Sbjct: 58 DSLQLIPLAGEATRWVDLGSGGGFPGLVVAAVLAERPGADVTLVESDSRKAAFLREAARI 117
Query: 121 TAARGKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V RI++ AP++ +++SARALA L LL+ + P+L Q
Sbjct: 118 AELPATVLPSRIEQVAPKIAEGVEIVSARALAPLPKLLDLAAPFLAQ 164
>gi|319409463|emb|CBI83112.1| glucose inhibited division protein B [Bartonella schoenbuchensis
R1]
Length = 215
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 87/135 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET+E L F L ++W+K+INL+S++TV W RH+ DS +++ LH W D G
Sbjct: 18 SVSRETVENLMRFESLVIQWNKRINLISTATVPVLWTRHILDSAQIYPLHNQCLHWCDFG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L + +GG ++L+ES KK +FLR V+ V CRI++ Q I
Sbjct: 78 SGGGFPAIVIAIFLKNRKGGHIDLVESNGKKVAFLRTVIAHLDLPATVHHCRIEDVYQKI 137
Query: 140 TTCDVISARALADLD 154
+VI+AR LA LD
Sbjct: 138 NKPEVITARGLASLD 152
>gi|307943444|ref|ZP_07658788.1| 16S rRNA methyltransferase GidB [Roseibium sp. TrichSKD4]
gi|307773074|gb|EFO32291.1| 16S rRNA methyltransferase GidB [Roseibium sp. TrichSKD4]
Length = 217
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 84/123 (68%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
RA + +VSRETL++L+ + L LKW K NL++ ST+ D W+RHV DSL+ P
Sbjct: 9 RAQDVHKFGDVSRETLDRLQIYVDLLLKWQKAQNLIAPSTIPDVWVRHVADSLQTHWSLP 68
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+W+D+GSGGGFPG++T+I L+ ++ V++IES KKA+FLR +++T + G V A
Sbjct: 69 GAKVWVDIGSGGGFPGVVTAIMLADVKDAHVHMIESNQKKATFLRTALRETGSNGTVHAG 128
Query: 131 RIQ 133
RI+
Sbjct: 129 RIE 131
>gi|99082706|ref|YP_614860.1| methyltransferase GidB [Ruegeria sp. TM1040]
gi|123252057|sp|Q1GCL8|RSMG_SILST RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|99038986|gb|ABF65598.1| methyltransferase GidB [Ruegeria sp. TM1040]
Length = 205
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETLE+L F + KW+ KINLVS +++D W RH+ DS++VF P W+D+G
Sbjct: 11 DVSRETLERLMVFSEVLKKWNPKINLVSRKSIDDLWTRHILDSIQVFDAAPEGGAWLDIG 70
Query: 80 SGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGG PGII +I + + L+ES +K +FLR ++ V + RI+ AP+
Sbjct: 71 SGGGLPGIIVAILAAEKSPDTRITLMESDLRKCAFLRNAARECGVSVTVKSKRIESAPE- 129
Query: 139 ITTCDVISARALADLDTLLEYS 160
CDV+SARALADLD LL ++
Sbjct: 130 -ENCDVLSARALADLDNLLGFA 150
>gi|86136758|ref|ZP_01055336.1| glucose-inhibited division protein B [Roseobacter sp. MED193]
gi|85826082|gb|EAQ46279.1| glucose-inhibited division protein B [Roseobacter sp. MED193]
Length = 206
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPS 73
LL NVSRET+E+LE F + LKW+ +INLVS ++++D W RH+ DS++VF +
Sbjct: 6 LLEQLNVSRETIERLEKFEEVLLKWNPRINLVSKNSLQDLWNRHIVDSVQVFTCVEDLGV 65
Query: 74 IWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+D+GSGGGFPGI+ +I + V LIES +K++FLR ++ V RI
Sbjct: 66 SWVDIGSGGGFPGIVVAIMAAEHAPKTKVTLIESDQRKSAFLRTAARECGVPVTVLNQRI 125
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYS 160
+EA PQ DV+SARA+ADLD LL +S
Sbjct: 126 EEADPQ---NADVLSARAVADLDALLYFS 151
>gi|328541702|ref|YP_004301811.1| ribosomal RNA small subunit methyltransferase G [polymorphum gilvum
SL003B-26A1]
gi|326411454|gb|ADZ68517.1| Ribosomal RNA small subunit methyltransferase G [Polymorphum gilvum
SL003B-26A1]
Length = 236
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L +VSRET E+L + L L+W NL++ ST+ + W RHV DSL+ P
Sbjct: 26 LAGVASVSRETAERLRIYVDLLLRWQPAQNLIAPSTIPEIWRRHVADSLQPHLCLPEARR 85
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG GFPG++T+I L+ G V L+ES +KA+FLR +++T A G V A RI+
Sbjct: 86 WVDLGSGAGFPGVVTAILLADKPGAHVYLVESNQRKAAFLRTALRETGAPGTVLAQRIES 145
Query: 135 APQMIT--TCDVISARALADLDTLLEYSFPWLYQ 166
+ + D +SARALA L L YS +L Q
Sbjct: 146 VAERWSHGPVDAVSARALAPLVDLCRYSRAFLAQ 179
>gi|259417839|ref|ZP_05741758.1| 16S rRNA methyltransferase GidB [Silicibacter sp. TrichCH4B]
gi|259346745|gb|EEW58559.1| 16S rRNA methyltransferase GidB [Silicibacter sp. TrichCH4B]
Length = 205
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 93/143 (65%), Gaps = 5/143 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET E+LE F + KW+ KINLVS ++ED W RH+ DS++VF++ P W+D+G
Sbjct: 11 DVSRETFERLEVFSEVLTKWNPKINLVSRKSLEDLWTRHILDSVQVFEIAPNAKTWLDIG 70
Query: 80 SGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQ 137
SGGG PG+I +I + V L+ES +K +FLR ++ + V + RI+EA P+
Sbjct: 71 SGGGLPGVIVAILAADKSPETKVTLMESDQRKCAFLRNAARECDVQVTVKSQRIEEAEPE 130
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ V+SARALADLD LL YS
Sbjct: 131 ---SAGVMSARALADLDILLGYS 150
>gi|149912891|ref|ZP_01901425.1| glucose-inhibited division protein B [Roseobacter sp. AzwK-3b]
gi|149813297|gb|EDM73123.1| glucose-inhibited division protein B [Roseobacter sp. AzwK-3b]
Length = 203
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 94/145 (64%), Gaps = 8/145 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
NVSRET+E+L + L KW+ +INLV+ ST+ D W RH DS++++ L P+P W+DL
Sbjct: 8 NVSRETVERLTIYEALLRKWTPRINLVARSTLPDLWQRHFVDSIQIYDLAPHPVDHWVDL 67
Query: 79 GSGGGFPGIITSIQLSSIEGG---LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
GSG GFPG++ +I S+E G L+ES +K FL V+++T AR V RI+
Sbjct: 68 GSGAGFPGLLMAIL--SLETGSPKRTTLVESDVRKCVFLNTVIRETGARADVINDRIENI 125
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
P + +V+SARALADL TLL ++
Sbjct: 126 PPL--EANVLSARALADLTTLLGFA 148
>gi|163745109|ref|ZP_02152469.1| methyltransferase GidB [Oceanibulbus indolifex HEL-45]
gi|161381927|gb|EDQ06336.1| methyltransferase GidB [Oceanibulbus indolifex HEL-45]
Length = 201
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +VSRETL+KLE F L KW+ KINLVS S+++D W RH+ DS++VF+L W+
Sbjct: 5 DVKDVSRETLQKLEAFAELVRKWNPKINLVSKSSLDDLWDRHILDSVQVFRLVEQGGNWV 64
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+GSGGGFPGI+ +I + V L+ES +K +FLR +++ V RI+ A
Sbjct: 65 DIGSGGGFPGIVIAILNQKEQKFRVRLVESDQRKCAFLRTAIRELGLTATVDNERIENAQ 124
Query: 137 QMITTCDVISARALADLDTLLEYS 160
+ D++SARAL+DL LL Y+
Sbjct: 125 NL--EADILSARALSDLSQLLAYA 146
>gi|84501193|ref|ZP_00999398.1| glucose-inhibited division protein B [Oceanicola batsensis
HTCC2597]
gi|84390484|gb|EAQ02972.1| glucose-inhibited division protein B [Oceanicola batsensis
HTCC2597]
Length = 201
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDL 78
+VSRETLE+LE F L +W+ +INLVS ST++D W RHV DS++VF+ S +W+D+
Sbjct: 6 DVSRETLERLEIFVRLLRQWNPRINLVSKSTLDDAWNRHVADSVQVFEASRQASGLWVDM 65
Query: 79 GSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I L V LIES +K +FLR V ++ + A RI++ P
Sbjct: 66 GSGGGFPGLVIAILALERAPALQVKLIESDQRKCAFLRTVAREAGVSVSIKARRIEDEPP 125
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ VISARALA L LL++S
Sbjct: 126 --SQASVISARALAPLTDLLQFS 146
>gi|110677825|ref|YP_680832.1| methyltransferase GidB [Roseobacter denitrificans OCh 114]
gi|123065967|sp|Q16CZ7|RSMG_ROSDO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109453941|gb|ABG30146.1| methyltransferase GidB [Roseobacter denitrificans OCh 114]
Length = 199
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ VSRET+ L+ ++ L LKW+ +INL+S S++ED W RH+ DS +V W
Sbjct: 1 MDASTVSRETMHALQMYHDLLLKWNARINLISKSSIEDVWSRHIWDSAQVVDCVAKAKTW 60
Query: 76 IDLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLGSGGG PGI+ +I +I+ V L+ES +KA+FLR V+++ + +V RI++
Sbjct: 61 VDLGSGGGMPGIVVAIFAKNIDPDRRVILVESDQRKAAFLRTVIRELSLNARVIVERIED 120
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
+ DV+SARALADL LL ++
Sbjct: 121 VAPL--RADVVSARALADLSVLLSFA 144
>gi|118591439|ref|ZP_01548837.1| glucose-inhibited division protein B [Stappia aggregata IAM 12614]
gi|118436111|gb|EAV42754.1| glucose-inhibited division protein B [Stappia aggregata IAM 12614]
Length = 194
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+++L+ + L LKW NL++ ST+ D W RHV DSL+ +P W+D+GSGGGFP
Sbjct: 1 MDRLQIYVDLVLKWQPAQNLIAPSTIPDIWTRHVADSLQTQWSYPEARTWVDIGSGGGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ--MITTCD 143
G++T+I L+ G V++IES +K +FLR +++T +RG V RI+ + + D
Sbjct: 61 GVVTAILLADEPGAHVHMIESNQRKVAFLRTALRETGSRGTVHPGRIESVAKDWKYGSVD 120
Query: 144 VISARALADLDTLLEYSFP 162
+SARALA LD L + S P
Sbjct: 121 AVSARALASLDLLFQLSEP 139
>gi|154245779|ref|YP_001416737.1| 16S rRNA methyltransferase GidB [Xanthobacter autotrophicus Py2]
gi|154159864|gb|ABS67080.1| glucose inhibited division protein [Xanthobacter autotrophicus Py2]
Length = 245
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLG 79
VSRETL +L L +KW K INLV+ +T+ D W RHV DSL++ P P W+DLG
Sbjct: 20 VSRETLGRLTTIADLLVKWQKTINLVAPATLPDLWARHVGDSLQLVHHVPQTPLRWVDLG 79
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG++ + L+ +G ++L+ES +KA+FLR + V A RI++ Q +
Sbjct: 80 SGGGFPGLVVAAVLAERDGAHMHLVESDTRKAAFLREAARLAQLPVTVHAARIEQVAQAL 139
Query: 140 TT-CDVISARALADLDTLLEYSFPWL 164
V+SARALA L LL+ + P+L
Sbjct: 140 APGTHVVSARALAPLPKLLDLAAPFL 165
>gi|126738503|ref|ZP_01754208.1| glucose-inhibited division protein B [Roseobacter sp. SK209-2-6]
gi|126720302|gb|EBA17008.1| glucose-inhibited division protein B [Roseobacter sp. SK209-2-6]
Length = 211
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 11/163 (6%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---- 68
+ + + +VSRET+++L +F KW+ KINLVS S+++DFW RH+ DS +VF L
Sbjct: 4 DLICGSLDVSRETIDRLSHFEQTLFKWNPKINLVSKSSLQDFWTRHIVDSAQVFLLAEDY 63
Query: 69 --HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARG 125
+ W+D+GSGGGFPG++ +I + L V LIES +KA+FLR ++ R
Sbjct: 64 ISKEEDTNWLDIGSGGGFPGLVIAILAAERAARLSVTLIESDKRKAAFLRTAARECDVRV 123
Query: 126 KVFACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
KV + RI++ PQ + +SARALADLD L E+S L+ +
Sbjct: 124 KVISDRIEKVDPQ---NANFLSARALADLDLLFEFSERHLHPR 163
>gi|58039525|ref|YP_191489.1| glucose inhibited division protein B [Gluconobacter oxydans 621H]
gi|81557091|sp|Q5FS13|RSMG_GLUOX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|58001939|gb|AAW60833.1| Glucose inhibited division protein B [Gluconobacter oxydans 621H]
Length = 193
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VSRET E+LE F L ++W+ KINLVS + W RH+EDSL++ +L P DLG
Sbjct: 3 TVSRETHERLERFADLLVQWNAKINLVSPRDIAQLWPRHIEDSLQLAELIPEGKTITDLG 62
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPGII +I G V LIES +K +FLR + AR V A RI+ A
Sbjct: 63 SGGGFPGIILAIAT----GNPVTLIESDQRKCAFLREAGRICEARVTVIAKRIEAASP-- 116
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D+I+ARALA L+ LLE++ P L +
Sbjct: 117 PPADIITARALAPLNRLLEWARPLLKE 143
>gi|149204375|ref|ZP_01881342.1| glucose-inhibited division protein B [Roseovarius sp. TM1035]
gi|149142260|gb|EDM30307.1| glucose-inhibited division protein B [Roseovarius sp. TM1035]
Length = 201
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 12/153 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
+VSRET +LE + L +KW+ +INLVS ++++ W RH DS ++ L P PS+ W+D
Sbjct: 6 DVSRETQARLEIYADLLVKWNPRINLVSRKSLDEMWTRHFADSAQIHALAP-PSVDHWVD 64
Query: 78 LGSGGGFPGIITSIQLSSIEGG---LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
LGSGGGFPG++ +I + +GG V LIES +KA+FLR V+++T V RI++
Sbjct: 65 LGSGGGFPGLVVAIL--AQDGGSPRRVTLIESDARKAAFLRVVIRETGLNAMVLNDRIEK 122
Query: 135 A-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
PQ DV+SARAL DL LLE+S L Q
Sbjct: 123 VRPQ---EADVLSARALTDLSGLLEFSERHLAQ 152
>gi|254504857|ref|ZP_05117008.1| methyltransferase GidB [Labrenzia alexandrii DFL-11]
gi|222440928|gb|EEE47607.1| methyltransferase GidB [Labrenzia alexandrii DFL-11]
Length = 194
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 91/143 (63%), Gaps = 2/143 (1%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+++L+ + L LKW NL++ ST+ D W RHV DSL+ +P +W+D+GSGGGFP
Sbjct: 1 MDRLQIYVDLVLKWQPAQNLIAPSTIPDIWTRHVADSLQTQWSYPEAKVWVDIGSGGGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT--TCD 143
G++T+I L+ V++IES +KA+FLR +++T ++G V A RI+ + + D
Sbjct: 61 GVVTAILLADEPDAHVHMIESNQRKAAFLRTALRETGSKGTVHAGRIESVAEGWSHGPVD 120
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+SARALA L+ L + + P+ Q
Sbjct: 121 AVSARALASLNLLFDLAEPFTAQ 143
>gi|126734410|ref|ZP_01750157.1| glucose-inhibited division protein B [Roseobacter sp. CCS2]
gi|126717276|gb|EBA14140.1| glucose-inhibited division protein B [Roseobacter sp. CCS2]
Length = 206
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 87/140 (62%), Gaps = 4/140 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
NVSRET++ LE F L KW+ KINL++SSTV W RH+ DS ++++ P W+D+
Sbjct: 9 NVSRETIDNLEAFGTLVTKWTPKINLIASSTVATLWDRHIIDSAQIYRFAPKDYENWVDM 68
Query: 79 GSGGGFPGIITSIQLSSIE-GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPGII +I S++ LIES +KA FLR ++ R V A RI+ P+
Sbjct: 69 GSGGGFPGIIMAIMAKSLQPDARFTLIESDQRKAIFLRTAARECGLRVDVIAQRIESVPK 128
Query: 138 MITTCDVISARALADLDTLL 157
+ DV+SARAL L LL
Sbjct: 129 QL--ADVVSARALTALSGLL 146
>gi|90421813|ref|YP_530183.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisB18]
gi|122477631|sp|Q21CM2|RSMG_RHOPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|90103827|gb|ABD85864.1| methyltransferase GidB [Rhodopseudomonas palustris BisB18]
Length = 234
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET +L+ + L L+W K NL+S +T+ W RHV DSL++ +L P W
Sbjct: 22 LRLTPVSRETEARLDAYVALLLQWQAKTNLISPATLPQLWTRHVADSLQLLRLAPDAKTW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPG++ + L+ GG V L+E KKA+FLR ++ T G+V I ++
Sbjct: 82 LDFGSGGGFPGVVLACALAESAGGSVQLVERNVKKAAFLREALRVTGGAGQVILADIGDS 141
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D ++ARA+A L L+ ++ P + Q
Sbjct: 142 VDRFAGQVDCVTARAVAPLHQLIGFAKPLIRQ 173
>gi|92115736|ref|YP_575465.1| 16S rRNA methyltransferase GidB [Nitrobacter hamburgensis X14]
gi|122418937|sp|Q1QRZ2|RSMG_NITHX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91798630|gb|ABE61005.1| methyltransferase GidB [Nitrobacter hamburgensis X14]
Length = 260
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L ++W K NL++SST+ W RH+ DSL++ L P W D GS
Sbjct: 53 VSRETEARLDAYVDLLVQWQTKTNLIASSTLPQLWTRHIADSLQLLALAPQAKRWADFGS 112
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPG++ + L+ +EG ++L+E KKA+FLR V+ T G + I + ++
Sbjct: 113 GGGFPGVVLACALADVEGARIDLVERNAKKAAFLREAVRITGTPGVIHPMDIGDYVDRLD 172
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L LL ++ P + Q
Sbjct: 173 GRIDCVTARALAPLQVLLGFAEPLVKQ 199
>gi|158426334|ref|YP_001527626.1| 16S rRNA methyltransferase GidB [Azorhizobium caulinodans ORS 571]
gi|189039479|sp|A8I267|RSMG_AZOC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158333223|dbj|BAF90708.1| putative methyltransferase [Azorhizobium caulinodans ORS 571]
Length = 275
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D +S L VSRETL +L+ +W K INLV+ +T+ D W RH+ DSL
Sbjct: 32 ADRSSALDGGRSQVAALVSRETLARLDTIAEQLTRWQKTINLVAPNTLPDLWHRHIADSL 91
Query: 64 RVFQLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ L P + W DLGSGGGFPG++ + L+ EG V L+ES +KA+FLR + A
Sbjct: 92 QLVWLVPETVLNWADLGSGGGFPGLVVAAVLAEREGAHVTLVESDTRKAAFLREASRAAA 151
Query: 123 ARGKVFACRIQEAPQMITT-CDVISARALADLDTLLEYSFPWL 164
++ RI++A Q + V+SARALA L LL+ + P+L
Sbjct: 152 LPTRIVPERIEQASQRLAAGMQVVSARALAPLPKLLDLTEPFL 194
>gi|56694930|ref|YP_165275.1| glucose-inhibited division protein B [Ruegeria pomeroyi DSS-3]
gi|81558750|sp|Q5LWF2|RSMG_SILPO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56676667|gb|AAV93333.1| glucose-inhibited division protein B [Ruegeria pomeroyi DSS-3]
Length = 204
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
NT NVSRET E+L+ F L KW+ +INLVS ++ED W RH+ DS++VF+ P +W+
Sbjct: 7 NTLNVSRETFERLKIFADLVHKWNPRINLVSKRSLEDLWTRHIIDSIQVFRNAPKGDLWV 66
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLI--ESKNKKASFLRYVVQKTAARGKVFACRIQE 134
DLGSGGGFPG+I +I L++ E I ES +K++FLR ++ +V + RI+
Sbjct: 67 DLGSGGGFPGLICAI-LAAEEKPETQFICVESDQRKSAFLRSAARECGIACQVISERIEH 125
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
+ D++SARAL DL LL ++
Sbjct: 126 LDPL--DADILSARALTDLTGLLGFA 149
>gi|85714097|ref|ZP_01045086.1| Glucose inhibited division protein [Nitrobacter sp. Nb-311A]
gi|85699223|gb|EAQ37091.1| Glucose inhibited division protein [Nitrobacter sp. Nb-311A]
Length = 270
Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS +T +L+ F L +W K NLV+ ST+ W RH+ DSL++ L P+ W DLGS
Sbjct: 62 VSPQTEARLDAFVGLLGQWQTKTNLVAPSTLPRLWTRHIADSLQLLALAPHAKRWADLGS 121
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPG++ + L+ IEG V+LIE KKA+FLR V+ TA+ G V I + ++
Sbjct: 122 GGGFPGVVLACALAGIEGARVDLIERNAKKAAFLREAVRITASPGIVHLTDIGDYVDRLE 181
Query: 140 TTCDVISARALADLDTLLEYSFP 162
D ++ARALA L LL ++ P
Sbjct: 182 DRIDCVTARALAPLQVLLGFAEP 204
>gi|148251784|ref|YP_001236369.1| 16S rRNA methyltransferase GidB [Bradyrhizobium sp. BTAi1]
gi|189039484|sp|A5E8G9|RSMG_BRASB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146403957|gb|ABQ32463.1| Glucose inhibited division protein B [Bradyrhizobium sp. BTAi1]
Length = 222
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L+ + L L+W K NLV+ ST+ W RH+ DSL++ L P IW+DLGS
Sbjct: 26 VSRETEQRLDRYVALLLEWQAKTNLVAPSTLPHLWTRHISDSLQLLDLAPDAKIWVDLGS 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ G V+L+E KKA+FLR ++ T A G V I + + +
Sbjct: 86 GGGFPGVVLACALAERPGAEVHLVERIAKKAAFLREAIRVTGAPGIVHLSEIGDIVEKWS 145
Query: 141 -TCDVISARALADLDTLLEYSFP 162
D ++ARALA L L+ ++ P
Sbjct: 146 GGVDCVTARALAPLHQLIGFAEP 168
>gi|89052692|ref|YP_508143.1| methyltransferase GidB [Jannaschia sp. CCS1]
gi|122499791|sp|Q28VZ4|RSMG_JANSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|88862241|gb|ABD53118.1| 16S rRNA m(7)G-527 methyltransferase [Jannaschia sp. CCS1]
Length = 211
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
VSRET+++LE ++ L +W K INL++ ST++ W+RH+ DS ++F L P+ W+DLG
Sbjct: 14 VSRETMDRLELYHTLLTRWQKTINLIAPSTIDSVWVRHIMDSAQLFDLASKPAHRWLDLG 73
Query: 80 SGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFPG++ + + L V L+ES +K FLR ++ K+ + RI + P
Sbjct: 74 SGGGFPGLVVAAMAKDVCPNLTVTLVESDIRKCGFLREAARQMDLSVKILSRRIGDVPAQ 133
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
T DVISARAL+ L L+ ++ P + K
Sbjct: 134 --TADVISARALSSLSNLIGHARPHMTPK 160
>gi|84684649|ref|ZP_01012550.1| glucose-inhibited division protein B [Maritimibacter alkaliphilus
HTCC2654]
gi|84667628|gb|EAQ14097.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2654]
Length = 206
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 93/147 (63%), Gaps = 4/147 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-I 74
L +VSRET +L+ F L KW++ INLVS+ST++D W RH DS ++ L S +
Sbjct: 7 LEAVSVSRETERRLDTFAELLTKWNRHINLVSASTLKDLWSRHFLDSAQLLSLAEGRSRL 66
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+D+G+GGGFPGI+ +I + + L V IES +KA+FLR V ++ +V + R++
Sbjct: 67 WLDVGTGGGFPGIVVAIIAAEAQPDLRVRCIESDQRKATFLRTVARECGVSVEVLSERVE 126
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
A M DVISARALA LD LL Y+
Sbjct: 127 RADPM--NADVISARALAPLDDLLAYA 151
>gi|83942029|ref|ZP_00954491.1| glucose-inhibited division protein B [Sulfitobacter sp. EE-36]
gi|83847849|gb|EAP85724.1| glucose-inhibited division protein B [Sulfitobacter sp. EE-36]
Length = 202
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETLEKL++F L KW+ KINL+S +V + W RH+ DSL+++ P S W+DLG
Sbjct: 8 DVSRETLEKLQHFSRLVEKWTAKINLISKPSVPEMWERHILDSLQIYSHAPNASHWVDLG 67
Query: 80 SGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFP I+ ++ E L+ES +K +FLR +++ V RI+E +
Sbjct: 68 SGGGFPAIVVALMSQQDERATKFTLVESDQRKCAFLRTAIRELELNATVANARIEEIEPL 127
Query: 139 ITTCDVISARALADLDTLLEYS 160
DV+SARAL+DL LL ++
Sbjct: 128 --EADVLSARALSDLTALLGFA 147
>gi|75674295|ref|YP_316716.1| glucose inhibited division protein [Nitrobacter winogradskyi
Nb-255]
gi|123614359|sp|Q3SWH7|RSMG_NITWN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|74419165|gb|ABA03364.1| Glucose inhibited division protein [Nitrobacter winogradskyi
Nb-255]
Length = 277
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
KY ++ +A L T VS ET +L+ + L ++W K NLV+SST+ W RH+ D
Sbjct: 52 KYSPCSATDKAAALALT-PVSSETEARLDAYVDLLVQWQTKTNLVASSTLPQLWTRHIAD 110
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL++ L P W DLGSGGGFPG++ + L+ IEG V+L+E KKA+FLR V+ T
Sbjct: 111 SLQLLALAPQAKCWADLGSGGGFPGVVLACALADIEGARVDLVERNAKKAAFLREAVRIT 170
Query: 122 AARGKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFP 162
A+ V I + + D ++ARALA L LL + P
Sbjct: 171 ASPASVHLMDIGDYVDRSEDRIDCVTARALAPLQVLLGFVEP 212
>gi|154251728|ref|YP_001412552.1| methyltransferase GidB [Parvibaculum lavamentivorans DS-1]
gi|189045873|sp|A7HSL2|RSMG_PARL1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154155678|gb|ABS62895.1| methyltransferase GidB [Parvibaculum lavamentivorans DS-1]
Length = 226
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 88/144 (61%), Gaps = 1/144 (0%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
NVSRETL++L + L KW K INLVS+ ++ + W RH+ DS ++ L P + WIDL
Sbjct: 23 NVSRETLDRLLSYEALLRKWQKSINLVSNGSLPELWRRHMLDSAQLVCLVPESARRWIDL 82
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGGFPG++ +I L G ++L+ES +K F+R V + T A V RI+ Q
Sbjct: 83 GSGGGFPGLVIAILLRERPGFQMHLVESDQRKCVFMREVARVTGAPATVHTVRIEAFAQG 142
Query: 139 ITTCDVISARALADLDTLLEYSFP 162
DV+SARALA LD L ++ P
Sbjct: 143 AEAGDVVSARALAPLDRLFGWAAP 166
>gi|260429113|ref|ZP_05783090.1| 16S rRNA methyltransferase GidB [Citreicella sp. SE45]
gi|260419736|gb|EEX12989.1| 16S rRNA methyltransferase GidB [Citreicella sp. SE45]
Length = 204
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-I 74
L +VSRET EKL++ L KWS +INLVS +T+ED W RH+ DS +VF + S
Sbjct: 5 LPGLDVSRETQEKLDHLVALLAKWSPRINLVSRTTLEDSWTRHILDSAQVFSVPEVQSGH 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W D GSGGGFPG++ +I + L V L+ES +K FLR +++T ++ + RI+
Sbjct: 65 WADFGSGGGFPGLVVAILAQDLAPDLKVTLVESDQRKCVFLRTALRETKVDAQILSERIE 124
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
+ + DVISARALADL LL ++
Sbjct: 125 KI--LPLRADVISARALADLTVLLAFA 149
>gi|146337361|ref|YP_001202409.1| 16S rRNA methyltransferase GidB [Bradyrhizobium sp. ORS278]
gi|189039485|sp|A4YJT3|RSMG_BRASO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146190167|emb|CAL74159.1| Glucose inhibited division protein B; Methyltransferase gidB
[Bradyrhizobium sp. ORS278]
Length = 222
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L L+W K NLV+ ST+ W RH+ DSL++ L P S W+DLGS
Sbjct: 26 VSRETERRLDRYIALLLEWQAKTNLVAPSTLPHLWTRHISDSLQLLDLAPEASFWVDLGS 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ G V+L+E KKA+FLR ++ T + G V I + + +
Sbjct: 86 GGGFPGVVLACALAERPGAKVHLVERIAKKAAFLREAIRVTGSPGTVHLSEIGDIVEKWS 145
Query: 141 T-CDVISARALADLDTLLEYSFP 162
D ++ARALA L L+ ++ P
Sbjct: 146 GRVDCVTARALAPLHQLVGFAEP 168
>gi|27375743|ref|NP_767272.1| 16S rRNA methyltransferase GidB [Bradyrhizobium japonicum USDA 110]
gi|55976511|sp|Q89WP6|RSMG_BRAJA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27348881|dbj|BAC45897.1| gidB [Bradyrhizobium japonicum USDA 110]
Length = 260
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Query: 7 NSILRANYL--LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+S++ A+ + L VSRET +L+ + L +W K NLV+ ST+ W RH+ DSL+
Sbjct: 49 DSVIAADKIAALKLAPVSRETEARLDRYIALLREWQAKTNLVAPSTLPHLWTRHIADSLQ 108
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ L P W DLGSGGGFPG++ + ++ G V+L+E KKA+FLR ++ T +
Sbjct: 109 LVDLAPTARRWADLGSGGGFPGVVLACTMAETPGASVHLVERIAKKAAFLREAIRITTSP 168
Query: 125 GKVFACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQ 166
G V I + IT D ++ARALA L L+ ++ P + Q
Sbjct: 169 GVVHLAEIGDNVDRITGPVDCVTARALAPLHQLIGFAEPLMRQ 211
>gi|310817161|ref|YP_003965125.1| methyltransferase GidB [Ketogulonicigenium vulgare Y25]
gi|308755896|gb|ADO43825.1| methyltransferase GidB [Ketogulonicigenium vulgare Y25]
Length = 207
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 94/154 (61%), Gaps = 7/154 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-- 72
LL NVSRET L F L LKW++KINL+S+++ ++ W RH+ DS++V+ P
Sbjct: 7 LLPNVNVSRETEALLREFAALILKWTQKINLISAASEDEIWQRHILDSVQVYTALPQDFQ 66
Query: 73 -SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFAC 130
W D GSGGG PGII ++ L+ GG V ++ES +KA+FLR V+ +V +
Sbjct: 67 WKTWADFGSGGGLPGIIIAV-LARETGGQVVMVESDQRKATFLRTAVRSLGLTNARVESK 125
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
RI+ P + + DVISARALA LD L ++ P L
Sbjct: 126 RIEALPAL--SADVISARALAALDMLCAFAAPHL 157
>gi|217978727|ref|YP_002362874.1| methyltransferase GidB [Methylocella silvestris BL2]
gi|217504103|gb|ACK51512.1| methyltransferase GidB [Methylocella silvestris BL2]
Length = 219
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
TL +L + L KW INLV+ ST++D WIRH DSL+V P W+DLGSGGGF
Sbjct: 29 TLRRLALYEALLRKWQGSINLVAKSTLDDIWIRHFVDSLQVSAAAPQARRWVDLGSGGGF 88
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMITTCD 143
PG++T+I+ + ++LIES +K +FLR V ++T A V RI++ A + D
Sbjct: 89 PGLVTAIRYADDPSAEIHLIESDQRKCAFLRTVSRETGAHAIVHCGRIEDIAAALDAPFD 148
Query: 144 VISARALADLDTLLEYSFPWL 164
+SARALA LL Y+ +L
Sbjct: 149 AVSARALAPFSQLLHYAERFL 169
>gi|77464806|ref|YP_354310.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides 2.4.1]
gi|123590766|sp|Q3IYH5|RSMG_RHOS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77389224|gb|ABA80409.1| putative GidB, Glucose inhibited division protein [Rhodobacter
sphaeroides 2.4.1]
Length = 206
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPS 73
+L +VSRET EKL +F L KW+K +NL+ STV+ W RHV DS ++ L P
Sbjct: 6 VLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVDSIWTRHVLDSAQLRTHLASQPR 65
Query: 74 IWIDLGSGGGFPGIITSIQLS--SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+W+DLGSG GFPGI+ +I + S E V L+ES +KA+FLR ++ V A R
Sbjct: 66 LWLDLGSGSGFPGIVVAIMAAYESPESRFV-LVESDQRKATFLRTACRELKLSASVLAAR 124
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I+ P DVISARALA L L + P L
Sbjct: 125 IESLPPQ--KADVISARALAALPDLCALAAPHL 155
>gi|126463649|ref|YP_001044763.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17029]
gi|189040715|sp|A3PNS5|RSMG_RHOS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126105313|gb|ABN77991.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17029]
Length = 206
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPS 73
+L +VSRET EKL +F L KW+K +NL+ STV+ W RHV DS ++ L P
Sbjct: 6 VLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVDSIWTRHVLDSAQLRTHLTSQPR 65
Query: 74 IWIDLGSGGGFPGIITSIQLS--SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+W+DLGSG GFPGI+ +I + S E V L+ES +KA+FLR ++ V A R
Sbjct: 66 LWLDLGSGSGFPGIVVAIMAADESPESRFV-LVESDQRKATFLRTACRELKLSAAVLAAR 124
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I+ P DVISARALA L L + P L
Sbjct: 125 IESLPPQ--KADVISARALAALPDLCALAAPHL 155
>gi|254512294|ref|ZP_05124361.1| methyltransferase GidB [Rhodobacteraceae bacterium KLH11]
gi|221536005|gb|EEE38993.1| methyltransferase GidB [Rhodobacteraceae bacterium KLH11]
Length = 207
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 95/145 (65%), Gaps = 5/145 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+T NVSRET E+L + L +W+ KINLVS +++++ W+RH++DS++++Q W+
Sbjct: 10 DTLNVSRETFERLTIYVDLLERWNPKINLVSRNSLKEIWVRHIQDSVQIYQCAEDAIHWV 69
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLV--NLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
DLGSGGGFPG++ +I ++ E L+ES +K++FLR V ++ +V + RI+
Sbjct: 70 DLGSGGGFPGMVCAI-MAKEEAPFTRFTLVESDQRKSAFLRNVARECGVDCRVVSRRIEM 128
Query: 135 APQMITTCDVISARALADLDTLLEY 159
+ D++SARALADL TLL +
Sbjct: 129 IDPL--RADILSARALADLGTLLSF 151
>gi|332559702|ref|ZP_08414024.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides WS8N]
gi|332277414|gb|EGJ22729.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides WS8N]
Length = 205
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPS 73
+L +VSRET EKL +F L KW+K +NL+ STVE W RH+ DS ++ L P
Sbjct: 5 VLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVESIWTRHILDSAQLRTHLASQPR 64
Query: 74 IWIDLGSGGGFPGIITSIQLS--SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+W+DLGSG GFPGI+ +I + S E V L+ES +KA+FLR ++ V A R
Sbjct: 65 LWLDLGSGSGFPGIVVAIIAADESPESRFV-LVESDQRKATFLRTACRELKLSASVLAAR 123
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I+ P DVISARALA L L + P L
Sbjct: 124 IESLPPQ--KADVISARALAALPDLCALAAPHL 154
>gi|209966080|ref|YP_002298995.1| methyltransferase GidB [Rhodospirillum centenum SW]
gi|226797829|sp|B6IV59|RSMG_RHOCS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209959546|gb|ACJ00183.1| methyltransferase GidB [Rhodospirillum centenum SW]
Length = 216
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 91/151 (60%), Gaps = 7/151 (4%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
RA + VSRETL++L + L KW+ INLV+ ST++D W RH DS ++F L P
Sbjct: 12 RATDFQAAFGVSRETLDRLAAYEALLRKWNPAINLVARSTLDDVWERHFADSAQLFALLP 71
Query: 71 YPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ + +DLGSG GFPG++ +I L E V+LIES +KA+FLR V + T A V A
Sbjct: 72 EGTRVLVDLGSGAGFPGLVLAI-LGVPE---VHLIESDGRKAAFLREVARVTGAPATVHA 127
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYS 160
R ++A D +SARALADL LL +
Sbjct: 128 QRAEQA--EAPPADAVSARALADLSALLPLA 156
>gi|91974911|ref|YP_567570.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisB5]
gi|123763116|sp|Q13E20|RSMG_RHOPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91681367|gb|ABE37669.1| methyltransferase GidB [Rhodopseudomonas palustris BisB5]
Length = 233
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET +L+ + L +W K NLV+ ST+ W RHV DSL++ L P W
Sbjct: 22 LQLTPVSRETERRLDAYLDLLRQWQAKTNLVAPSTLPQLWTRHVADSLQLLTLAPDARRW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPGI+ + ++ +GG V L+E KKA+FLR ++ T + G V I +
Sbjct: 82 LDFGSGGGFPGIVLACAMAEHDGGHVTLVERNAKKAAFLREALRVTGSPGTVMLADIGDN 141
Query: 136 ----PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
PQ + D I+ARA+A L L+ ++ P + +
Sbjct: 142 VDRFPQGL---DCITARAVAPLHQLIGFARPLMTE 173
>gi|86747516|ref|YP_484012.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris HaA2]
gi|123004743|sp|Q2J359|RSMG_RHOP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86570544|gb|ABD05101.1| methyltransferase GidB [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET +L+ + L W K NLV+ ST+ W RHV DSL++ L P W
Sbjct: 22 LRLTPVSRETETRLDAYLDLLRLWQAKTNLVAPSTLPQLWTRHVADSLQLLALAPTARRW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
+D GSGGGFPGI+ + ++ +GG V L+E KKA+FLR ++ T A G V I +
Sbjct: 82 LDFGSGGGFPGIVLACAMAEHDGGHVTLVERNAKKAAFLREALRVTGAPGTVMLADIGDN 141
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I+ARA+A L L+ ++ P + +
Sbjct: 142 VDRFPRALDCITARAVAPLHQLIGFAAPLMTE 173
>gi|323135830|ref|ZP_08070913.1| methyltransferase GidB [Methylocystis sp. ATCC 49242]
gi|322398921|gb|EFY01440.1| methyltransferase GidB [Methylocystis sp. ATCC 49242]
Length = 217
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+LE + L +W KINLV+ +T+ + W+RH DS + + P +W+D+GSG GFPG+
Sbjct: 23 ELEIYEELLRRWQGKINLVAPNTLNEIWMRHFADSAQAVEAAPEARVWLDIGSGAGFPGL 82
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ-EAPQMITTCDVIS 146
+T++ L V+LIES +KA+F+R V ++T A ++ RI+ E P++ D +S
Sbjct: 83 VTALLLKDRREAKVHLIESDQRKAAFMRAVSRETGAPAEIHVGRIEAELPRLSGRIDAVS 142
Query: 147 ARALADLDTLL 157
ARALA LD LL
Sbjct: 143 ARALAPLDRLL 153
>gi|83953078|ref|ZP_00961800.1| glucose-inhibited division protein B [Sulfitobacter sp. NAS-14.1]
gi|83842046|gb|EAP81214.1| glucose-inhibited division protein B [Sulfitobacter sp. NAS-14.1]
Length = 202
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 3/142 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETLEKL++F L KW+ KINL+S +V + W RH+ DSL+++ P W+DLG
Sbjct: 8 DVSRETLEKLQHFSQLVEKWTAKINLISKPSVPEMWERHILDSLQIYSHAPNAGHWVDLG 67
Query: 80 SGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFP I+ ++ E L+ES +K +FLR +++ V RI+ +
Sbjct: 68 SGGGFPAIVVALMSQQDERATKFTLVESDQRKCAFLRTAIRELELNATVANARIEAIEPL 127
Query: 139 ITTCDVISARALADLDTLLEYS 160
DV+SARAL+DL LL ++
Sbjct: 128 --EADVLSARALSDLTALLGFA 147
>gi|90421003|ref|ZP_01228907.1| glucose-inhibited division protein B [Aurantimonas manganoxydans
SI85-9A1]
gi|90334781|gb|EAS48557.1| glucose-inhibited division protein B [Aurantimonas manganoxydans
SI85-9A1]
Length = 240
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 92/154 (59%), Gaps = 4/154 (2%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
RA +L +T NVSRETLE+L+ + L +W ++NLV+ +T+ D W RH+ DSL + +L P
Sbjct: 40 RAEFL-STRNVSRETLERLDRYVALLTEWQTRMNLVAPATIGDVWSRHIADSLALERLLP 98
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++ +DLGSG G PG++ + ++ V+L+E+ +KK +FLR V + G
Sbjct: 99 NVTVCVDLGSGAGLPGLVIAAARPALS---VDLVEANSKKIAFLRAVQRDLGLSGMAHGA 155
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
RI++ ++ D++ ARALA L L P +
Sbjct: 156 RIEDCGAVLAKADIVIARALASLTELFALVAPHI 189
>gi|115522413|ref|YP_779324.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisA53]
gi|122297909|sp|Q07UP0|RSMG_RHOP5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115516360|gb|ABJ04344.1| methyltransferase GidB [Rhodopseudomonas palustris BisA53]
Length = 231
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 8/155 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET +L+ + L L+W K NL+S +T+ W RH+ DSL++ + P W
Sbjct: 22 LRLTPVSRETESRLDAYVALLLQWQAKTNLISPATLPQLWTRHIADSLQLLTVAPDARTW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPG++ + ++ + GG V L+E KKA+FLR ++ + G+V I ++
Sbjct: 82 LDFGSGGGFPGVVLACAMAEL-GGSVTLVERNAKKAAFLREALRVSGGVGQVILADIGDS 140
Query: 136 ----PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P I D I+ARA+A L L+ ++ P L++
Sbjct: 141 VDRFPPHI---DCITARAVAPLHQLIGFAEPLLHR 172
>gi|189183333|ref|YP_001937118.1| 16S rRNA methyltransferase GidB [Orientia tsutsugamushi str. Ikeda]
gi|238692233|sp|B3CQX7|RSMG_ORITI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189180104|dbj|BAG39884.1| glucose inhibited division protein B [Orientia tsutsugamushi str.
Ikeda]
Length = 198
Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 92/144 (63%), Gaps = 8/144 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWI 76
YNVSRET K + +Y L KW+ INLVS++T+++FW RH+ DS+++ +H I
Sbjct: 12 NYNVSRETFNKFKEYYSLLSKWNSTINLVSATTLQNFWQRHIFDSIQLLNYIHNKDIIVA 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLGSG GFPG++ SI S I+ V LIES ++KA+FL V Q + + ++ RIQ
Sbjct: 72 DLGSGAGFPGVVLSI--SGIKN--VILIESDSRKAAFLLQVAQLSDQKIEIINDRIQNLK 127
Query: 137 QMITTCDVISARALADLDTLLEYS 160
CD+++ RALA+L T+L ++
Sbjct: 128 ---VKCDIVTVRALANLSTILSHT 148
>gi|258543706|ref|YP_003189139.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01]
gi|256634784|dbj|BAI00760.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01]
gi|256637840|dbj|BAI03809.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-03]
gi|256640894|dbj|BAI06856.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-07]
gi|256643949|dbj|BAI09904.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-22]
gi|256647004|dbj|BAI12952.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-26]
gi|256650057|dbj|BAI15998.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-32]
gi|256653047|dbj|BAI18981.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256656101|dbj|BAI22028.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-12]
Length = 198
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET EKL F L KW+ +INLVSS +E+ W RHV DSL++ L S +ID+G
Sbjct: 9 HVSRETEEKLSAFVSLLEKWNPRINLVSSKDIENVWSRHVLDSLQLVPLIQGQSRFIDMG 68
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP ++ I + I G LIES +KA+FLR + T +V CR++ +
Sbjct: 69 SGGGFPAVVVGIA-TGIPG---VLIESDQRKAAFLREAARLTQTHLEVLPCRLESV--KV 122
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
V++ARALA L LLE++ P L
Sbjct: 123 QPAPVVTARALAPLVKLLEWAHPLL 147
>gi|254472398|ref|ZP_05085798.1| methyltransferase GidB [Pseudovibrio sp. JE062]
gi|211958681|gb|EEA93881.1| methyltransferase GidB [Pseudovibrio sp. JE062]
Length = 206
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 14/149 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET E+L + L KW NL++ ST+ D W+RHV DS+++ + P WID G
Sbjct: 6 DVSRETFERLSIYVDLVRKWQPAQNLIAPSTMNDIWMRHVADSIQIQRSLPDARSWIDFG 65
Query: 80 SGGGFPGIITSIQLSSIEG--GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---- 133
SG GFPG++T++ L EG G+V+++ES +KA+FLR V ++ KV A RI+
Sbjct: 66 SGAGFPGLVTAMLLKQ-EGDDGIVHMVESNQRKAAFLRTVAREAGCNVKVHAGRIEAVTK 124
Query: 134 --EAPQMITTCDVISARALADLDTLLEYS 160
EAP + +SARALA L L +S
Sbjct: 125 GWEAP-----IEGVSARALASLQVLCGFS 148
>gi|329113881|ref|ZP_08242652.1| Ribosomal RNA small subunit methyltransferase G [Acetobacter
pomorum DM001]
gi|326696891|gb|EGE48561.1| Ribosomal RNA small subunit methyltransferase G [Acetobacter
pomorum DM001]
Length = 198
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET E+L F L KW+ +INLVSS +E+ W RHV DSL++ L S +ID+G
Sbjct: 9 HVSRETEERLSAFVSLLEKWNPRINLVSSKDIENVWSRHVLDSLQLVPLIQGQSRFIDMG 68
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP ++ I + I G LIES +KA+FLR + T +V CR++ +
Sbjct: 69 SGGGFPAVVVGI-ATGIPG---VLIESDQRKAAFLREAARLTQTDLEVLPCRLESV--KV 122
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
V++ARALA L LLE++ P L K
Sbjct: 123 QPAPVVTARALAPLVKLLEWAHPLLQPK 150
>gi|110635798|ref|YP_676006.1| glucose-inhibited division protein B [Mesorhizobium sp. BNC1]
gi|123057421|sp|Q11CN4|RSMG_MESSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110286782|gb|ABG64841.1| methyltransferase GidB [Chelativorans sp. BNC1]
Length = 210
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 83/144 (57%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET + L F F KWS +INL + ST+ W RH+ DS ++ ++ P W+DLGS
Sbjct: 16 VSRETFDGLVAFEGEFRKWSARINLTAPSTLPHLWERHILDSAQLIRIAPAARRWLDLGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG + +I + V+L+ES KKA+FL+ + A + RI++ I
Sbjct: 76 GGGFPGAVIAILMKEHAPAQVDLVESNRKKAAFLQTSLASLKAPCMIHPQRIEDCYGQIP 135
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
+VI+ARALA L L + PW+
Sbjct: 136 PPEVITARALAPLPVLFGLAEPWM 159
>gi|83309102|ref|YP_419366.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Magnetospirillum magneticum AMB-1]
gi|123543729|sp|Q2WBG8|RSMG_MAGMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82943943|dbj|BAE48807.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Magnetospirillum magneticum
AMB-1]
Length = 205
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 92/153 (60%), Gaps = 7/153 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS- 73
LL VSRETLE+L + L +KW +INLV TV D W RH+ DS+++F L +
Sbjct: 6 LLTKSGVSRETLERLRLYADLLVKWQARINLVGPDTVPDLWSRHMLDSVQLFPLIKVGAR 65
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+DLGSG GFPG++ ++ + V+L+ES ++K +FLR V + T V RI+
Sbjct: 66 RLVDLGSGAGFPGLVLAVMGAPD----VHLVESDSRKCAFLREVARVTETPVTVINKRIE 121
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARALA LD LL ++FP L +
Sbjct: 122 QVAPL--GADVVTARALAPLDRLLGWAFPHLAE 152
>gi|209883523|ref|YP_002287380.1| methyltransferase GidB [Oligotropha carboxidovorans OM5]
gi|209871719|gb|ACI91515.1| methyltransferase GidB [Oligotropha carboxidovorans OM5]
Length = 229
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRETL +LE + L L+W NLV+ ST+ W RHV DSL++ L + DLGS
Sbjct: 23 VSRETLGRLEAYVDLLLQWQAVTNLVAPSTLPTLWTRHVADSLQLLDLASRAKTFADLGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPGI+ + L+ G V+L+E KKA+FLR ++ T G+V I +
Sbjct: 83 GGGFPGIVLACALADRPGAHVDLVERNAKKAAFLREALRITGGAGEVHHRDIGDYVNSRA 142
Query: 140 TTCDVISARALADLDTLLEYSFP 162
D ++ARALA L LL ++ P
Sbjct: 143 APVDCVTARALAPLHQLLGFAEP 165
>gi|299133193|ref|ZP_07026388.1| methyltransferase GidB [Afipia sp. 1NLS2]
gi|298593330|gb|EFI53530.1| methyltransferase GidB [Afipia sp. 1NLS2]
Length = 220
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +LE + L L+W NLV+ ST+ W RH+ DSL++ L P + DLGS
Sbjct: 16 VSRETQARLEAYVDLLLQWQAVTNLVAPSTLPTLWTRHIADSLQLLDLAPNAKTFADLGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPGI+ + L+ G ++L+E KKA+FLR ++ T G+V I +
Sbjct: 76 GGGFPGIVLACVLADRPGARIDLVERNAKKAAFLREALRITGGAGEVHHRDIVDYVDSRT 135
Query: 140 TTCDVISARALADLDTLLEYSFP 162
D ++ARALA L LL ++ P
Sbjct: 136 APVDCVTARALAPLHQLLGFAEP 158
>gi|148284582|ref|YP_001248672.1| glucose-inhibited division protein B [Orientia tsutsugamushi str.
Boryong]
gi|189045871|sp|A5CDU7|RSMG_ORITB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146740021|emb|CAM80105.1| glucose inhibited division protein [Orientia tsutsugamushi str.
Boryong]
Length = 198
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 91/144 (63%), Gaps = 8/144 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWI 76
YNVSRET K + +Y L KW+ INLVS++T+++FW RH+ DS+++ +H I
Sbjct: 12 NYNVSRETFNKFKEYYSLLSKWNSTINLVSATTLQNFWQRHIFDSIQLLNYIHNKDIIVA 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLGSG GFPG++ SI S I+ V LIES ++KA+FL Q + + ++ RIQ
Sbjct: 72 DLGSGAGFPGVVLSI--SGIKN--VILIESDSRKAAFLLQAAQLSDQKIEIINDRIQNLK 127
Query: 137 QMITTCDVISARALADLDTLLEYS 160
CD+++ RALA+L T+L ++
Sbjct: 128 ---VKCDLVTVRALANLSTILSHT 148
>gi|126724524|ref|ZP_01740367.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2150]
gi|126705688|gb|EBA04778.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2150]
Length = 203
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 8/145 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDL 78
NVSRET++ L F L +KW+ KINLVS ++++ W RH+ DS++VF L +W+D+
Sbjct: 8 NVSRETMDDLSVFADLLIKWNAKINLVSPKSIDELWHRHIADSVQVFDLVKVEKGLWVDM 67
Query: 79 GSGGGFPGIITSI--QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA- 135
G+GGGFPG I +I + E V IES +K+ FLR V+++ +V RI++
Sbjct: 68 GTGGGFPGAICAIVAKHKKPEMKFV-FIESDTRKSLFLRTVIRELDLNARVENERIEKTQ 126
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
PQ DV+SARALA LD LL ++
Sbjct: 127 PQ---NADVVSARALASLDLLLGFA 148
>gi|146278698|ref|YP_001168857.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17025]
gi|189040716|sp|A4WVY8|RSMG_RHOS5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145556939|gb|ABP71552.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17025]
Length = 208
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
NVSRETL KLE + L KW+ INL+ ST WIRH++DS +++ L P W+DL
Sbjct: 13 NVSRETLGKLEQYADLVRKWNSAINLIGRSTEGQIWIRHIQDSAQLWGLRAAPFGTWLDL 72
Query: 79 GSGGGFPGII-TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGG PGI+ +I L+ES +KA+FLR + V A R+++ P
Sbjct: 73 GSGGGLPGIVLATIATEKAPESRFVLVESDQRKATFLRTAARTLCLNVTVHAARVEQLPP 132
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
DVISARALA L L + P L
Sbjct: 133 Q--RADVISARALAPLTDLCALAAPHL 157
>gi|83950773|ref|ZP_00959506.1| glucose-inhibited division protein B [Roseovarius nubinhibens ISM]
gi|83838672|gb|EAP77968.1| glucose-inhibited division protein B [Roseovarius nubinhibens ISM]
Length = 200
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 6/148 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SI 74
++ NVSRET E+LE + L KW+ KINLV+ +++ + RH EDS ++ P S
Sbjct: 1 MSLANVSRETEERLEIYAALLEKWNPKINLVARASLNEAGRRHFEDSAQIMLHAPTQISH 60
Query: 75 WIDLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI- 132
W+D+GSGGGFPG++ +I S +G LIES +K +FLR V ++T+ V + RI
Sbjct: 61 WVDIGSGGGFPGLVAAILAQESHKGAKFTLIESDQRKCAFLRSVSRETSVPVTVLSERIE 120
Query: 133 QEAPQMITTCDVISARALADLDTLLEYS 160
Q APQ DV+SARALA L LL ++
Sbjct: 121 QAAPQ---EADVLSARALAPLTDLLGFA 145
>gi|255261433|ref|ZP_05340775.1| 16S rRNA methyltransferase GidB [Thalassiobium sp. R2A62]
gi|255103768|gb|EET46442.1| 16S rRNA methyltransferase GidB [Thalassiobium sp. R2A62]
Length = 203
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 7/145 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
NVSRET+++L+ + L LKW+ IN+V+ ST+ D W+RH+EDS ++ P I W+DL
Sbjct: 7 NVSRETIDRLKAYESLILKWNPVINVVAKSTLTDIWVRHIEDSAQIVDFAPDGIIHWVDL 66
Query: 79 GSGGGFPGIITSIQLSSIE-GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA- 135
GSGGG PG++ ++ L+ ++ LIES +KA+FLR + V + RI+
Sbjct: 67 GSGGGLPGVVAALILAERSPDAVITLIESDKRKAAFLRTAALELGCSSISVVSDRIESVK 126
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
PQ ++SARALA LD LL ++
Sbjct: 127 PQ---RASILSARALAKLDVLLSFA 148
>gi|84514916|ref|ZP_01002279.1| putative GidB, Glucose inhibited division protein [Loktanella
vestfoldensis SKA53]
gi|84511075|gb|EAQ07529.1| putative GidB, Glucose inhibited division protein [Loktanella
vestfoldensis SKA53]
Length = 214
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SI 74
+ +VSRETL L+ F L LKW+ KINL+S+S+ W RHV DS++V++ P +
Sbjct: 14 VGGIDVSRETLADLQAFAALVLKWTPKINLISASSHAMIWDRHVVDSVQVYRHAPDDFHL 73
Query: 75 WIDLGSGGGFPGIITSI--QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+D+GSGGGFPGI+ +I + + V LIES +K +FLR +++ +V A RI
Sbjct: 74 WLDIGSGGGFPGIVAAILGKARHPDAQFV-LIESDQRKVAFLRTAIRELGLTARVLADRI 132
Query: 133 QEAPQMITTCDVISARALADLDTLL 157
+E P DV+S RAL + LL
Sbjct: 133 EEVPP--AGADVVSVRALGSVSFLL 155
>gi|304392707|ref|ZP_07374647.1| 16S rRNA methyltransferase GidB [Ahrensia sp. R2A130]
gi|303295337|gb|EFL89697.1| 16S rRNA methyltransferase GidB [Ahrensia sp. R2A130]
Length = 212
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 9/150 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VSRET E+L+ ++ L +KW K+INLVS ST+ D W RH DS+++ L + +D G
Sbjct: 13 GVSRETAERLQVYHDLLVKWQKQINLVSPSTIPDAWQRHFLDSMQIAPLITGGTSLVDFG 72
Query: 80 SGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQ-----KTAARGKVFACRI 132
SG GFPG++ +I +++G L N L+ES KKA+FLR V++ KT V R+
Sbjct: 73 SGAGFPGLVLAIM--NVDGPLTNVHLVESNGKKAAFLRAVLRDIGLAKTGMTVTVHNERV 130
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + D I+ARAL+ L LL S P
Sbjct: 131 EVVSTTMPAPDWITARALSSLSELLTMSAP 160
>gi|218660236|ref|ZP_03516166.1| glucose-inhibited division protein B [Rhizobium etli IE4771]
Length = 139
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 67/89 (75%)
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A I
Sbjct: 1 SGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDAHAEI 60
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQKK 168
CD ISARALADLD L+ Y+ PW+ K+
Sbjct: 61 GECDAISARALADLDGLIGYAAPWMLGKE 89
>gi|188580909|ref|YP_001924354.1| methyltransferase GidB [Methylobacterium populi BJ001]
gi|238692888|sp|B1ZGG1|RSMG_METPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|179344407|gb|ACB79819.1| methyltransferase GidB [Methylobacterium populi BJ001]
Length = 211
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 82/152 (53%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +L +NVSRET + L+ + +W NLV +T+ + W RHV D+L++ + P
Sbjct: 7 SRVLTEHNVSRETAQALDLYVAQLTRWQTVKNLVGPATLSEVWQRHVADALQLLTIAPEA 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+DLGSG G PG+I +I G V L+ES +K +FL + T A V RI
Sbjct: 67 RRWLDLGSGAGIPGLILAIAGRGRSGFHVELVESNARKCAFLSETARLTGAPVTVHNARI 126
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARALA L LL +S P L
Sbjct: 127 EAVIGHRSGIDIVCARALAPLTQLLAWSEPLL 158
>gi|114705862|ref|ZP_01438765.1| putative GidB, Glucose inhibited division protein [Fulvimarina
pelagi HTCC2506]
gi|114538708|gb|EAU41829.1| putative GidB, Glucose inhibited division protein [Fulvimarina
pelagi HTCC2506]
Length = 248
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++VSRETL L+ + + W ++NLV+ ST+ W RH+ DSL++ P DL
Sbjct: 55 FDVSRETLTALDRYVAMLTDWQTRMNLVAPSTLATVWERHIADSLQLEAFLPPFETGADL 114
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG PGI+ +I + V+L+ES KKA+FLR V + V A RI+ +
Sbjct: 115 GSGGGLPGIVIAIMRPEAK---VHLVESVGKKATFLRAVADELGLNTHVHARRIEASGHA 171
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ +V++ARA+A LD LL P +
Sbjct: 172 LRQSEVVTARAVASLDRLLGLVSPHI 197
>gi|114762198|ref|ZP_01441666.1| glucose-inhibited division protein B [Pelagibaca bermudensis
HTCC2601]
gi|114545222|gb|EAU48225.1| glucose-inhibited division protein B [Roseovarius sp. HTCC2601]
Length = 181
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 6/129 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQL 93
+ KWS KINLV+ ST+ D W RH+ DS +VF L + +W DLG+GGGFPG++ +I
Sbjct: 1 MLEKWSPKINLVAKSTLSDGWNRHIIDSAQVFDLRQQDTGLWADLGAGGGFPGLVVAILA 60
Query: 94 SSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMITTCDVISARALA 151
+ + V L+ES +KA FLR V+++T V RI++ AP D++SARALA
Sbjct: 61 HELAPEMKVALVESDQRKAVFLRSVLRETGVSADVKVARIEQLAP---LEADILSARALA 117
Query: 152 DLDTLLEYS 160
DL TLL ++
Sbjct: 118 DLPTLLSFA 126
>gi|300024785|ref|YP_003757396.1| methyltransferase GidB [Hyphomicrobium denitrificans ATCC 51888]
gi|299526606|gb|ADJ25075.1| methyltransferase GidB [Hyphomicrobium denitrificans ATCC 51888]
Length = 219
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 5/149 (3%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WI 76
+ +SRETL++L + + +W INLV+ ST+ D W RH DS ++++ P P+ W+
Sbjct: 17 FGISRETLDRLTTYAQILTRWQATINLVAPSTLGDIWNRHFADSAQLWRFRP-PNARNWL 75
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ--E 134
D+GSG GFPG++ +I + LIES +KA+FLR V + T + RI+ E
Sbjct: 76 DIGSGAGFPGLVLAIIGAETGATHHILIESDARKAAFLREVARATGITVDILCMRIENSE 135
Query: 135 APQMITTCDVISARALADLDTLLEYSFPW 163
+ + D ++ARALA L LLE S P+
Sbjct: 136 TRAKVKSVDCLTARALAPLPRLLEMSAPY 164
>gi|163851011|ref|YP_001639054.1| methyltransferase GidB [Methylobacterium extorquens PA1]
gi|238687374|sp|A9W327|RSMG_METEP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163662616|gb|ABY29983.1| methyltransferase GidB [Methylobacterium extorquens PA1]
Length = 211
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 85/152 (55%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
++L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P
Sbjct: 7 THVLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLTVAPEA 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI
Sbjct: 67 TRWLDLGSGAGIPGLILALAGKERPGFHVGLVESNARKCAFLSETARLTGAPVTVHNARI 126
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ +T +++ ARALA L LL ++ P L
Sbjct: 127 EAVIGTLTDTEIVCARALAPLSQLLAWTEPLL 158
>gi|39933370|ref|NP_945646.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris CGA009]
gi|55976427|sp|Q6ND16|RSMG_RHOPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39652995|emb|CAE25737.1| putative glucose inhibited division protein B (GidB)
[Rhodopseudomonas palustris CGA009]
Length = 223
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L+ + L +W K NLV+ ST+ W RHV DSL++ L P+ W+D GSGGGFPG+
Sbjct: 34 RLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMPHARRWLDFGSGGGFPGV 93
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCD 143
+ + ++ + GG V L+E KKA+FLR ++ A G V I + PQ + D
Sbjct: 94 VLACAMADV-GGHVTLVERIAKKAAFLREALRVAGAPGTVILADIGDNVDRFPQAL---D 149
Query: 144 VISARALADLDTLLEYSFPWL 164
I+ARA+A L L+ ++ P +
Sbjct: 150 CITARAVAPLHQLIGFAEPLM 170
>gi|220921037|ref|YP_002496338.1| methyltransferase GidB [Methylobacterium nodulans ORS 2060]
gi|254766898|sp|B8IHZ7|RSMG_METNO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219945643|gb|ACL56035.1| methyltransferase GidB [Methylobacterium nodulans ORS 2060]
Length = 212
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +L VSRET L+ + +W NLV ST+ + W RH+ DSL++ P
Sbjct: 7 DRVLAAAAVSRETAAALDLYVAQLARWQTVKNLVGPSTLPEVWTRHIADSLQLLDAAPGA 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ W+DLGSG G PG+I +I + V+L+ES +K +FL+ + T A ++ R
Sbjct: 67 TRWLDLGSGAGIPGLILAIAGREARPQMQVDLVESNARKGAFLQETARLTGASARIHVSR 126
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I+ T +V+ ARALA L LL ++ P L
Sbjct: 127 IESVIGRFTGVEVVCARALAPLPQLLAWTAPLL 159
>gi|192288726|ref|YP_001989331.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris TIE-1]
gi|238692577|sp|B3Q8A6|RSMG_RHOPT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|192282475|gb|ACE98855.1| methyltransferase GidB [Rhodopseudomonas palustris TIE-1]
Length = 223
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L+ + L +W K NLV+ ST+ W RHV DSL++ L P+ W+D GSGGGFPG+
Sbjct: 34 RLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMPHARRWLDFGSGGGFPGV 93
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCD 143
+ + ++ + GG V L+E KKA+FLR ++ A G V I + PQ + D
Sbjct: 94 VLACAMADV-GGHVTLVERIAKKAAFLREALRVAGAPGTVVLADIGDNVDRFPQAL---D 149
Query: 144 VISARALADLDTLLEYSFPWL 164
I+ARA+A L L+ ++ P +
Sbjct: 150 CITARAVAPLHQLIGFAEPLM 170
>gi|170750485|ref|YP_001756745.1| methyltransferase GidB [Methylobacterium radiotolerans JCM 2831]
gi|193806447|sp|B1M187|RSMG_METRJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170657007|gb|ACB26062.1| methyltransferase GidB [Methylobacterium radiotolerans JCM 2831]
Length = 211
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L VSRET E+L+ + +W NLV +T+ + W RH++D+L++ L P
Sbjct: 9 VLAAAGVSRETAERLDLYVAQLRRWQPIKNLVGPATLTEVWSRHIDDALQLLDLAPEART 68
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+DLGSG G PG+I +I + E G+ V+L+ES +K +FL + T A +V RI+
Sbjct: 69 WLDLGSGAGIPGLILAI--AGRERGVRVDLVESNARKCAFLTETARLTEAPARVRNARIE 126
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
DV+ ARALA + LL ++ P L
Sbjct: 127 AVIGEYGGTDVVCARALAPMTQLLAWTEPLL 157
>gi|170739704|ref|YP_001768359.1| methyltransferase GidB [Methylobacterium sp. 4-46]
gi|193806448|sp|B0UJI7|RSMG_METS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168193978|gb|ACA15925.1| methyltransferase GidB [Methylobacterium sp. 4-46]
Length = 212
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +L VSRET L+ + +W NLV +T+ D W RH+ DSL++ P
Sbjct: 7 DRVLAEAGVSRETAAALDLYVAQLTRWQAIKNLVGPATLPDVWTRHIADSLQLLDAAPQA 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACR 131
W+DLGSG G PG+I +I L V+L+ES +K +FL+ + T A ++ R
Sbjct: 67 RTWLDLGSGAGIPGLILAIAGVRNRPDLRVDLVESNARKGAFLQETARLTGAPARIHVAR 126
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I+ DV+ ARALA L L+ ++ P L
Sbjct: 127 IERVVAGFRGVDVVCARALAPLPQLIAWTAPLL 159
>gi|316931726|ref|YP_004106708.1| methyltransferase GidB [Rhodopseudomonas palustris DX-1]
gi|315599440|gb|ADU41975.1| methyltransferase GidB [Rhodopseudomonas palustris DX-1]
Length = 223
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++S +L+ + L +W K NLV+ ST+ W RHV DSL++ L P W
Sbjct: 22 LRLVSISPALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLVPNARRW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPG++ + ++ + GG V L+E KKA+FLR ++ A G V I +
Sbjct: 82 LDFGSGGGFPGVVLACAMADV-GGHVTLVERIAKKAAFLREALRVAGAPGTVMLADIGDN 140
Query: 136 ----PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
PQ + D I+ARA+A L L+ ++ P + +
Sbjct: 141 VDRFPQAL---DCITARAVAPLHQLIGFAEPLMTPR 173
>gi|218529838|ref|YP_002420654.1| methyltransferase GidB [Methylobacterium chloromethanicum CM4]
gi|254766897|sp|B7KV55|RSMG_METC4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218522141|gb|ACK82726.1| methyltransferase GidB [Methylobacterium chloromethanicum CM4]
Length = 211
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 84/150 (56%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 9 VLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLSIAPEATR 68
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI+
Sbjct: 69 WLDLGSGAGIPGLILALAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIEA 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+T +++ ARALA L LL ++ P L
Sbjct: 129 VIGTLTDTEIVCARALAPLSQLLAWTEPLL 158
>gi|240138142|ref|YP_002962614.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens AM1]
gi|240008111|gb|ACS39337.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens AM1]
Length = 234
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 84/150 (56%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 32 VLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLSIAPEATR 91
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI+
Sbjct: 92 WLDLGSGAGIPGLILALAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIEA 151
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+T +++ ARALA L LL ++ P L
Sbjct: 152 VIGTLTDTEIVCARALAPLSQLLAWTEPLL 181
>gi|254450602|ref|ZP_05064039.1| methyltransferase GidB [Octadecabacter antarcticus 238]
gi|198265008|gb|EDY89278.1| methyltransferase GidB [Octadecabacter antarcticus 238]
Length = 202
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRET++KLE L KW+K INL++ ++V D W RH+ DS +VF P + W DL
Sbjct: 8 DVSRETMDKLEQLCALITKWTKAINLIAPNSVPDLWDRHIVDSAQVFHCAPDDWTCWTDL 67
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG P ++ +I + + LIES +K FL+ ++ K+ RI +A
Sbjct: 68 GSGGGLPALVVAIL--DQQKRPMTLIESDQRKCLFLKTARRELGLDIKIVNKRITDAD-- 123
Query: 139 ITTCDVISARALADLDTLLEYS 160
+ DV+SARALA L LL Y+
Sbjct: 124 VAKADVLSARALAPLSDLLGYA 145
>gi|83594955|ref|YP_428707.1| glucose inhibited division protein [Rhodospirillum rubrum ATCC
11170]
gi|123525452|sp|Q2RN75|RSMG_RHORT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83577869|gb|ABC24420.1| Glucose inhibited division protein [Rhodospirillum rubrum ATCC
11170]
Length = 201
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 90/145 (62%), Gaps = 7/145 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLG 79
VSRET+E+LE + + KW ++INLV +T++D W RH DS ++ L P P+ + +DLG
Sbjct: 12 VSRETVERLEAYLAVLEKWQRRINLVGKTTLDDPWRRHFLDSAQLLALLPTPTRVLLDLG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFPG++ +I L E V+L+E+ +K++FL + T R + R++ P +
Sbjct: 72 SGAGFPGLVLAI-LGVPE---VHLVEADGRKSAFLIEAARITNTRIVLHTLRLEALP--V 125
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
DV++ARA A L +LE + P+L
Sbjct: 126 FPVDVVTARAFAPLARILEGAAPFL 150
>gi|254560704|ref|YP_003067799.1| methyltransferase gidB [Methylobacterium extorquens DM4]
gi|254267982|emb|CAX23850.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens DM4]
Length = 234
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 83/150 (55%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L+ ++VSRET + + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 32 VLSEHHVSRETAASFDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLTVAPEATR 91
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W+DLGSG G PG+I +I G V L+ES +K +FL + T A V RI+
Sbjct: 92 WLDLGSGAGIPGLILAIAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIEA 151
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+T +++ ARALA L LL ++ P L
Sbjct: 152 VIGTLTDTEIVCARALAPLSQLLAWTEPLL 181
>gi|254437935|ref|ZP_05051429.1| methyltransferase GidB [Octadecabacter antarcticus 307]
gi|198253381|gb|EDY77695.1| methyltransferase GidB [Octadecabacter antarcticus 307]
Length = 206
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRET+EKLE L +KW+K INL++ ++V + W RH+ DS +VF P + W+DL
Sbjct: 12 DVSRETMEKLEQLSALIIKWTKAINLIAPNSVPNLWDRHIVDSAQVFHCAPDSWTHWVDL 71
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG P ++ +I + L+ LIES +K FL ++ + RI A +
Sbjct: 72 GSGGGLPALVVAIL--DQQNRLITLIESDKRKCLFLTTARRELGLNISIINRRIANAETV 129
Query: 139 ITTCDVISARALADLDTLLEYS 160
++ISARALA L+ LL Y+
Sbjct: 130 --PANIISARALAPLNDLLGYA 149
>gi|126730102|ref|ZP_01745914.1| glucose-inhibited division protein B [Sagittula stellata E-37]
gi|126709482|gb|EBA08536.1| glucose-inhibited division protein B [Sagittula stellata E-37]
Length = 205
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDL 78
NVSR T KLE + L KW+ INLVS T++D RH DS ++ L P + +DL
Sbjct: 10 NVSRGTSLKLEQYLSLLKKWNTVINLVSPKTLDDAVKRHFLDSAQLVDLMPEDAGTLVDL 69
Query: 79 GSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I + L V L+ES +KASFLR V+++T G V + RI +
Sbjct: 70 GSGGGFPGLVIAILSAETRPNLKVTLVESDQRKASFLRTVLRETEISGTVLSKRIMDVEP 129
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ D+++ARALA L L +++
Sbjct: 130 L--QADILTARALAPLLELCQFA 150
>gi|83944971|ref|ZP_00957337.1| glucose inhibited division protein B, putative [Oceanicaulis
alexandrii HTCC2633]
gi|83851753|gb|EAP89608.1| glucose inhibited division protein B, putative [Oceanicaulis
alexandrii HTCC2633]
Length = 212
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VSRETLE+ E + L + S NLV T+ +FW RH DS +VF+L P W DLG
Sbjct: 16 GVSRETLERFETWRRLLEETSAHTNLVGRGTLTEFWHRHALDSWQVFELMPEARRWADLG 75
Query: 80 SGGGFPGIITSIQLSSIEG--GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G GFPG+ + L G V +++S KK +F+ V+++T A A R+ E+
Sbjct: 76 AGAGFPGLAIAFALMERHAGKGHVLMVDSVAKKMAFVNQVIRETKAPAIARADRV-ESIH 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ DV++ARA+A L LL Y P++
Sbjct: 135 PVPEVDVVTARAMAPLGKLLGYVHPFV 161
>gi|114798745|ref|YP_762233.1| methyltransferase GidB [Hyphomonas neptunium ATCC 15444]
gi|122941980|sp|Q0BWB0|RSMG_HYPNA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114738919|gb|ABI77044.1| methyltransferase GidB [Hyphomonas neptunium ATCC 15444]
Length = 207
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L +VSRETL++L+ W +K NL+ W RHV DS ++ P +
Sbjct: 10 FLAANDVSRETLDRLDRVIDTLDVWRQKSNLIGPKEWPQIWTRHVGDSWQLLDHIPETAH 69
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLGSG GFPG+I + S G V +IES KK +FLR +Q+ V R++
Sbjct: 70 LVDLGSGAGFPGLIIAAARSL---GHVTMIESVGKKCAFLRAAIQEADLSAAVHQGRVEA 126
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
AP + + ++ARA A L LL+Y+ PWL +
Sbjct: 127 APPI--KAEFVTARAFAPLPELLDYAAPWLRK 156
>gi|296114341|ref|ZP_06832995.1| putative methyltransferase gidB (glucose-inhibited divisio protein
B) [Gluconacetobacter hansenii ATCC 23769]
gi|295979102|gb|EFG85826.1| putative methyltransferase gidB (glucose-inhibited divisio protein
B) [Gluconacetobacter hansenii ATCC 23769]
Length = 214
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET ++L + L ++W+ +INLVS + W RH+ DSL++ L P + +D+G
Sbjct: 15 DVSRETRDRLTAYADLLVRWNARINLVSRPDLAQLWPRHIADSLQLAALIPQGARVVDMG 74
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG++ ++ + V LIES +KA+FLR + R +V A RI+
Sbjct: 75 SGGGFPGLVIAMATDA----HVTLIESDQRKAAFLREASRVAGVRTRVIAARIEA--AEA 128
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+++ARALA L LL++ +L ++
Sbjct: 129 GPADIVTARALAPLPQLLQWGVRFLDKE 156
>gi|162147022|ref|YP_001601483.1| methyltransferase gidB (glucose-inhibited divisio protein B)
[Gluconacetobacter diazotrophicus PAl 5]
gi|189039395|sp|A9HE10|RSMG_GLUDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161785599|emb|CAP55170.1| putative methyltransferase gidB (Glucose-inhibited divisio protein
B) [Gluconacetobacter diazotrophicus PAl 5]
Length = 210
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL+ F + +W+ +INLVS + W RH+ D L++ L P D+GSGGGFPG+
Sbjct: 20 KLDRFAEILTRWNSRINLVSPRDLAHLWDRHIADCLQLASLIPPGVRLADMGSGGGFPGL 79
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I ++ + V LIES +KA+FLR + AR + A RI++A I V++A
Sbjct: 80 IIAMATDAD----VTLIESDQRKAAFLREAARAVGARVTIIARRIEDAD--IPPVQVVTA 133
Query: 148 RALADLDTLLEYS 160
RALA L LLE+S
Sbjct: 134 RALAALPQLLEWS 146
>gi|209544084|ref|YP_002276313.1| methyltransferase GidB [Gluconacetobacter diazotrophicus PAl 5]
gi|209531761|gb|ACI51698.1| methyltransferase GidB [Gluconacetobacter diazotrophicus PAl 5]
Length = 209
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL+ F + +W+ +INLVS + W RH+ D L++ L P D+GSGGGFPG+
Sbjct: 19 KLDRFAEILTRWNSRINLVSPRDLAHLWDRHIADCLQLASLIPPGVRLADMGSGGGFPGL 78
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I ++ + V LIES +KA+FLR + AR + A RI++A I V++A
Sbjct: 79 IIAMATDAD----VTLIESDQRKAAFLREAARAVGARVTIIARRIEDAD--IPPVQVVTA 132
Query: 148 RALADLDTLLEYS 160
RALA L LLE+S
Sbjct: 133 RALAALPQLLEWS 145
>gi|296445003|ref|ZP_06886964.1| methyltransferase GidB [Methylosinus trichosporium OB3b]
gi|296257424|gb|EFH04490.1| methyltransferase GidB [Methylosinus trichosporium OB3b]
Length = 221
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-------- 74
R + + E + L KW K NLV++ T+ W RH DS ++ L +P+I
Sbjct: 22 RSHIREFETYEALLRKWQKSTNLVAAGTLPHLWTRHFADSAQI--LDAFPNIDAVSKIET 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
W DLG+G GFPG++ +I L G V+LIES +K SFLR V ++T A ++ RI+
Sbjct: 80 WADLGAGAGFPGMVLAICLKDRPGARVHLIESDQRKVSFLRAVSRETGAAAEIHLGRIES 139
Query: 135 A-PQMITTCDVISARALADLDTLLEYS 160
P + ++ARALA L L+++S
Sbjct: 140 ILPSLEDRVVGVTARALAPLSQLVDWS 166
>gi|288956854|ref|YP_003447195.1| glucose inhibited division protein B [Azospirillum sp. B510]
gi|288909162|dbj|BAI70651.1| glucose inhibited division protein B [Azospirillum sp. B510]
Length = 204
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 85/149 (57%), Gaps = 7/149 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDL 78
VSRETL++L + L KW KINLV ST+ D W RH DS ++ L P + + +DL
Sbjct: 14 GVSRETLDRLIAYEGLLRKWQPKINLVGPSTLPDAWKRHFLDSAQLLPLLPEDTRVLVDL 73
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFPG++ +I + V+LIES +K +FLR V + A V RI+ +
Sbjct: 74 GSGAGFPGLVLAI----LGVPQVHLIESDVRKCAFLREVARVCKAPVTVHTRRIETVTGI 129
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
DV++ARALA L L ++ P++ +
Sbjct: 130 --EADVVTARALAPLADLFGWAHPFIGSR 156
>gi|161170271|gb|ABX59241.1| predicted S-adenosylmethionine-dependent methyltransferase
[uncultured marine bacterium EB000_55B11]
gi|297183800|gb|ADI19923.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 213
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 4/155 (2%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS- 73
L+ +VSRET++ L + L KW+K INLVS ST+ W RH DS +++ P +
Sbjct: 10 LMCICDVSRETIQSLRVYANLLEKWNKTINLVSKSTINHMWERHFLDSAQLWPHIPENAK 69
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+GSG GF G++ +I L V LIES +K +F+R V ++T ++ RI
Sbjct: 70 TLVDIGSGAGFAGLVLAIIGKEKNPNLRVVLIESDTRKCAFMRNVSRETNINVEIITKRI 129
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+E + DV++ARALA + LL+YS L +K
Sbjct: 130 EEVDDL--KADVVTARALATVSQLLDYSKNILKKK 162
>gi|294085214|ref|YP_003551974.1| glucose inhibited division protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664789|gb|ADE39890.1| Glucose inhibited division protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 219
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 82/138 (59%), Gaps = 7/138 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIW 75
+ NVSRET++K + L KW K +NLV+ +T++ W RH+ DS ++ + P
Sbjct: 28 DMLNVSRETIDKFAIYLALLEKWQKSVNLVARATLDIAWQRHILDSGQLARYLPAGCKTI 87
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFPG++ SI ++ V+++ES +KK FL+ V++K V RI+
Sbjct: 88 LDVGSGAGFPGLVLSI----MQDATVHMVESDHKKTVFLQTVIRKLDLSAVVHNERIESL 143
Query: 136 PQMITTCDVISARALADL 153
P M+ DVI+ARA A L
Sbjct: 144 PAMVP--DVITARAFAPL 159
>gi|114769775|ref|ZP_01447385.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [alpha proteobacterium
HTCC2255]
gi|114549480|gb|EAU52362.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [alpha proteobacterium
HTCC2255]
Length = 213
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 4/150 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDL 78
+VSRET++ L + L KW+K INLVS ST+ W RH DS +++ P + +D+
Sbjct: 15 DVSRETIQSLRVYANLLEKWNKTINLVSKSTINHMWERHFLDSAQLWPHIPENAKTLVDI 74
Query: 79 GSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSG GF G++ +I L V LIES +K +F+R V ++T ++ RI+E
Sbjct: 75 GSGAGFAGLVLAIIGKEKNPNLRVVLIESDTRKCAFMRNVSRETNINVEIITKRIEEVDD 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV++ARALA + LL+YS L +K
Sbjct: 135 L--KADVVTARALATVSQLLDYSKNILKKK 162
>gi|330991275|ref|ZP_08315226.1| Ribosomal RNA small subunit methyltransferase G [Gluconacetobacter
sp. SXCC-1]
gi|329761294|gb|EGG77787.1| Ribosomal RNA small subunit methyltransferase G [Gluconacetobacter
sp. SXCC-1]
Length = 208
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 10/133 (7%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YP 72
L + +VSRET E+LE + + L+W++KINLVS + W RH+ DSL++ L P P
Sbjct: 7 LPSGLDVSRETHERLERYADILLRWNQKINLVSPHDLPHLWSRHIADSLQLAALIPAGAP 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +D+GSGGGFPG++ + + V LIES +KA+FLR + + +V A R+
Sbjct: 67 GL-VDMGSGGGFPGLVIACATDA----RVTLIESDQRKAAFLREAARVAGVQVRVCAQRL 121
Query: 133 QEA---PQMITTC 142
++A P ++ T
Sbjct: 122 EQADVPPALVVTA 134
>gi|329891181|ref|ZP_08269524.1| 16S rRNA methyltransferase GidB [Brevundimonas diminuta ATCC 11568]
gi|328846482|gb|EGF96046.1| 16S rRNA methyltransferase GidB [Brevundimonas diminuta ATCC 11568]
Length = 206
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
S + L+ F + + ++ +NLV T+ DFW RH DS ++ L P W DLG
Sbjct: 13 GASDANIADLQAFLVMLTEANEVMNLVGPDTIPDFWNRHAWDSAQLLSLAPEAKTWADLG 72
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G GFPG++ +I L G V L++S K+ FL+ +V V R +E Q I
Sbjct: 73 AGAGFPGVVLAILLKGRPGAHVWLVDSLGKRCRFLQTIVDALDLPATVVNGRAEE--QTI 130
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A +D LL Y+ P+ +
Sbjct: 131 -SVDIVTARAVAAMDKLLGYAQPYFQR 156
>gi|241762352|ref|ZP_04760432.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260753424|ref|YP_003226317.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|241373146|gb|EER62785.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552787|gb|ACV75733.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 221
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----- 68
+L +SRET+EKL+ F NL++ STV+D W RH+ DS ++ L
Sbjct: 9 WLDQHIGISRETVEKLDAFVACLHAEMAHQNLIARSTVDDLWGRHIIDSAQLLPLARKEA 68
Query: 69 ----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
P W+DLGSG GFPGII +I LS + V L+ES+ K+ FL +
Sbjct: 69 AFNKKASPKSWLDLGSGAGFPGIIIAI-LSEM---AVTLVESRRKRVEFLEKAAEAAGTP 124
Query: 125 GKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++ PQ D+I+ARA A LD L +FP+ +++
Sbjct: 125 VTILGQRLENIEPQAF---DIITARAFAPLDKLWRLAFPFSHKE 165
>gi|56552876|ref|YP_163715.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ZM4]
gi|81598131|sp|Q5NL06|RSMG_ZYMMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56544450|gb|AAV90604.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ZM4]
Length = 221
Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 17/164 (10%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----- 68
+L +SRET+EKL+ F NL++ STV+D W RH+ DS ++ L
Sbjct: 9 WLDQHIGISRETVEKLDAFVACLHAEMAHQNLIARSTVDDLWGRHIIDSAQLLPLARKEA 68
Query: 69 ----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
P W+DLGSG GFPGII +I LS + V L+ES+ K+ FL +
Sbjct: 69 AFNKKASPKSWLDLGSGAGFPGIIIAI-LSEM---AVTLVESRRKRVEFLEKAAEAAGTP 124
Query: 125 GKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++ PQ D+I+ARA A LD L +FP+ + +
Sbjct: 125 VTILGQRLENIEPQAF---DIITARAFAPLDKLWRLAFPFSHNE 165
>gi|89067426|ref|ZP_01154939.1| glucose-inhibited division protein B [Oceanicola granulosus
HTCC2516]
gi|89046995|gb|EAR53049.1| glucose-inhibited division protein B [Oceanicola granulosus
HTCC2516]
Length = 188
Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 13/136 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIIT 89
F L KW+ +INLVS ++ D RH+ DS+++++ H P + W DLGSGGGFPGII
Sbjct: 4 FAQLVAKWNPRINLVSKGSLADLHDRHIADSIQLYR-HIPPEVESWADLGSGGGFPGIIL 62
Query: 90 SI-----QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
+I + S IE V L+ES +KA+FLR ++ V RI++ P M
Sbjct: 63 AILAKGTRSSPIE---VTLVESDQRKATFLRTASRQLDLAVNVATSRIEDLPPM--NAHG 117
Query: 145 ISARALADLDTLLEYS 160
+SARALA L LL+Y+
Sbjct: 118 LSARALAPLTKLLDYA 133
>gi|119382762|ref|YP_913818.1| methyltransferase GidB [Paracoccus denitrificans PD1222]
gi|171704537|sp|A1AXX8|RSMG_PARDP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119372529|gb|ABL68122.1| 16S rRNA m(7)G-527 methyltransferase [Paracoccus denitrificans
PD1222]
Length = 193
Score = 93.6 bits (231), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRET E+L + L KW+ INL+++ST++ RH+ DSL + ++ W+DL
Sbjct: 2 SVSRET-ERLATYAGLLRKWNPAINLIAASTIDQIEARHIADSLHLVEIAKNAQGSWVDL 60
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG PGI+ +I +E ++++ES +K +FLR +++ A C+ EA
Sbjct: 61 GSGGGLPGIVVAIMRPDLE---LSMVESDQRKGAFLRNAIRELALPHAKVLCKRIEALDR 117
Query: 139 ITTCDVISARALADLDTLLEY 159
+ + +SARALA L L+ Y
Sbjct: 118 LDAAN-LSARALAPLPQLMAY 137
>gi|163732965|ref|ZP_02140409.1| methyltransferase GidB [Roseobacter litoralis Och 149]
gi|161393500|gb|EDQ17825.1| methyltransferase GidB [Roseobacter litoralis Och 149]
Length = 203
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 3/146 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ VSRETL+ L ++ L LKW+ +INLVS S+++D W RH+ DS ++ W
Sbjct: 5 MDASTVSRETLDALRAYHELLLKWNSRINLVSKSSIDDVWQRHIWDSAQIVDCAEDVKTW 64
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLGSGGG PG++ +I + L+ES +KA+FLR V+++ + +V RI+
Sbjct: 65 VDLGSGGGLPGLVVAIMAKVADPNWKTILVESDQRKAAFLRTVIRELSLNARVIVDRIET 124
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
+ DV+SARALADL LL ++
Sbjct: 125 VAPL--RADVVSARALADLSVLLSFA 148
>gi|144899660|emb|CAM76524.1| Methyltransferase [Magnetospirillum gryphiswaldense MSR-1]
Length = 222
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
+L +S + + +L + L +KW K+INLV T+ W RH DS ++F L P +I
Sbjct: 27 VLAPLTLSADAVTRLGLYAELLVKWQKRINLVGPDTIPSLWSRHFLDSAQLFPLLPQ-NI 85
Query: 75 W--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+GSG GFPG++ +I + V+L+ES +K +FLR V + T + RI
Sbjct: 86 HRVMDMGSGAGFPGLVLAI----LGAPDVHLVESDARKCAFLREVARITETAVTIHNARI 141
Query: 133 QEAPQMITTCDVISARALADLDTLLEYS 160
++ P + D+I+ARALA L+ LL ++
Sbjct: 142 EKVPPL--GADLITARALAPLEKLLTWA 167
>gi|167648980|ref|YP_001686643.1| methyltransferase GidB [Caulobacter sp. K31]
gi|189039491|sp|B0T6E2|RSMG_CAUSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167351410|gb|ABZ74145.1| methyltransferase GidB [Caulobacter sp. K31]
Length = 221
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L L F L +W++ +NLV +T+ +W RH DS ++ +L P W DLG+G G P
Sbjct: 32 LADLTRFQALLTEWNEVMNLVGPATLPTYWNRHAWDSAQLLKLAPDARTWADLGAGAGLP 91
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G++ +I L G ++L+ES K+ FLR V ++ R +E + +++
Sbjct: 92 GVVLAILLKGTPGAKIHLVESMTKRCKFLRAVADALDLPVEIHNARAEE---LDLKVEIV 148
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA A + LL Y+ P+L
Sbjct: 149 TARACAPMVRLLGYAQPYL 167
>gi|114326674|ref|YP_743831.1| methyltransferase gidB [Granulibacter bethesdensis CGDNIH1]
gi|122328341|sp|Q0BW94|RSMG_GRABC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114314848|gb|ABI60908.1| methyltransferase gidB [Granulibacter bethesdensis CGDNIH1]
Length = 213
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV-EDSLRVFQLHPYPSIWIDL 78
VSRET EKL + L +W++ +NLVS + VE RH+ + + L P P ID+
Sbjct: 23 GVSRETGEKLALYESLLTRWTRTVNLVSRNDVEHIRDRHILDSLQLLPLLEPLPGPLIDI 82
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG PG++ +I G +L+E+ +KA+FLR + T + V ACRI++
Sbjct: 83 GSGGGLPGLVLAIA----TGRETHLVEADQRKAAFLREAARATESNVTVHACRIEQC--N 136
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
I V++ARALA L+ LL Y+ L +
Sbjct: 137 IAPAPVLTARALAPLNVLLGYALRLLSK 164
>gi|221236806|ref|YP_002519243.1| methyltransferase gidB [Caulobacter crescentus NA1000]
gi|239977586|sp|B8GW32|RSMG_CAUCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|239977587|sp|P0CAW6|RSMG_CAUCR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|220965979|gb|ACL97335.1| methyltransferase gidB [Caulobacter crescentus NA1000]
Length = 216
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L A + +E L F L +W++ +NLV T+ +W RH DS ++
Sbjct: 10 EAVLDAAGFQALVGATDAQIEDLTRFQTLLAEWNEVMNLVGPLTIATYWTRHALDSAQLI 69
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P + W DLG+G G PG++ +I L G V+L+ES K+ FL V + +
Sbjct: 70 PLAPEATAWADLGAGAGLPGVVLAILLKGRAGAKVHLVESMIKRCRFLEVVAKDLDLPVQ 129
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R ++ + D+++ARA A + LL ++ P+L
Sbjct: 130 IHNARAED---LKLKVDIVTARACAPMTKLLGFAEPYL 164
>gi|15603936|ref|NP_220451.1| 16S rRNA methyltransferase GidB [Rickettsia prowazekii str. Madrid
E]
gi|6225446|sp|Q9ZE89|RSMG_RICPR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|3860627|emb|CAA14528.1| GLUCOSE INHIBITED DIVISION PROTEIN B (gidB) [Rickettsia prowazekii]
gi|292571654|gb|ADE29569.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia prowazekii Rp22]
Length = 191
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 82/143 (57%), Gaps = 12/143 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V E +EKLE F L KW+K INL+S +T+ +FW RH+ DSL++ Q I ID+G
Sbjct: 3 VQSEIIEKLEIFQNLIKKWNKSINLISDNTIPNFWQRHILDSLQLMQYISNKEIHLIDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG GFPGI+ SI G+ V+LIE+ +K FL + + ++ RI++
Sbjct: 63 SGAGFPGIVLSI------AGVTKVSLIEADLRKCIFLAKASKISNNSIQIINQRIEKIE- 115
Query: 138 MITTCDVISARALADLDTLLEYS 160
C +++ RA ++L+T+ Y+
Sbjct: 116 --IDCSILTCRAFSNLNTIFNYT 136
>gi|302381485|ref|YP_003817308.1| methyltransferase GidB [Brevundimonas subvibrioides ATCC 15264]
gi|302192113|gb|ADK99684.1| methyltransferase GidB [Brevundimonas subvibrioides ATCC 15264]
Length = 204
Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + LE F + + + +NLV ++ DFW RH DS ++ L + W DLG+G G
Sbjct: 15 ERMADLERFRVMLTEANAVMNLVGPDSLPDFWSRHAWDSAQLVDLAGFGKTWADLGAGAG 74
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FPG++ +I G V LI+S K+ FL+ +V + V R +E D
Sbjct: 75 FPGVVLAILAKGRPGSHVWLIDSLQKRCRFLQTIVDELELPATVVWGRAEE---QALKVD 131
Query: 144 VISARALADLDTLLEYSFPWL 164
+++ARA+A +D LL Y+ P+L
Sbjct: 132 IVTARAVAPMDKLLGYAQPYL 152
>gi|16127984|ref|NP_422548.1| glucose inhibited division protein B [Caulobacter crescentus CB15]
gi|5174777|gb|AAD40694.1| GidB [Caulobacter crescentus CB15]
gi|13425528|gb|AAK25716.1| glucose inhibited division protein B, putative [Caulobacter
crescentus CB15]
Length = 205
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+E L F L +W++ +NLV T+ +W RH DS ++ L P + W DLG+G G P
Sbjct: 18 IEDLTRFQTLLAEWNEVMNLVGPLTIATYWTRHALDSAQLIPLAPEATAWADLGAGAGLP 77
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G++ +I L G V+L+ES K+ FL V + ++ R ++ + D++
Sbjct: 78 GVVLAILLKGRAGAKVHLVESMIKRCRFLEVVAKDLDLPVQIHNARAED---LKLKVDIV 134
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA A + LL ++ P+L
Sbjct: 135 TARACAPMTKLLGFAEPYL 153
>gi|296533442|ref|ZP_06896025.1| 16S rRNA methyltransferase GidB [Roseomonas cervicalis ATCC 49957]
gi|296266222|gb|EFH12264.1| 16S rRNA methyltransferase GidB [Roseomonas cervicalis ATCC 49957]
Length = 206
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 12/150 (8%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSI 74
+ VSRET +LE F L L+W+ +INLV+SS RH+ DSL++ L P
Sbjct: 9 MPPVAVSRETEARLEAFLALLLRWNARINLVASSDPAVLRQRHIADSLQLLPLLPEGEGP 68
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ 133
DLGSGGGFPG++ L+S V+L+ES +K++FL+ + + KV A RI+
Sbjct: 69 MADLGSGGGFPGLV----LASAVTRPVHLVESDRRKSAFLQAAAAELGLSHVKVHAERIE 124
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
+ V++ARALA L+ +L PW
Sbjct: 125 AV--SLPPIAVLTARALAPLEKML----PW 148
>gi|165932647|ref|YP_001649436.1| 16S rRNA methyltransferase GidB [Rickettsia rickettsii str. Iowa]
gi|189040816|sp|B0BW04|RSMG_RICRO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|165907734|gb|ABY72030.1| methyltransferase [Rickettsia rickettsii str. Iowa]
Length = 192
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 4 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 63
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG G PGI+ SI G+ V+LIE+ +K FL + + ++ RI++
Sbjct: 64 SGAGLPGIVLSI------AGVAQVSLIEADLRKCIFLEKASKISNNNVQIINQRIEKVE- 116
Query: 138 MITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 117 --IDCSILTCRAFSNLNTI 133
>gi|157827959|ref|YP_001494201.1| 16S rRNA methyltransferase GidB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|166224609|sp|A8GQL8|RSMG_RICRS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157800440|gb|ABV75693.1| glucose-inhibited division protein B [Rickettsia rickettsii str.
'Sheila Smith']
Length = 191
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG G PGI+ SI G+ V+LIE+ +K FL + + ++ RI++
Sbjct: 63 SGAGLPGIVLSI------AGVAQVSLIEADLRKCIFLEKASKISNNNVQIINQRIEKVE- 115
Query: 138 MITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 116 --IDCSILTCRAFSNLNTI 132
>gi|254418145|ref|ZP_05031869.1| methyltransferase GidB [Brevundimonas sp. BAL3]
gi|196184322|gb|EDX79298.1| methyltransferase GidB [Brevundimonas sp. BAL3]
Length = 210
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ + + L+ F + + +NLV ++ DFW RH DS ++ P W DLG
Sbjct: 14 GATSQQIADLDDFRIRLSEANSVMNLVGPDSLPDFWNRHAWDSAQLLTHAPGARTWADLG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G GFPG++ +I L G V LI+S K+ FL+ +V V R +E
Sbjct: 74 AGAGFPGVVLAILLKDAPGAHVWLIDSLGKRCRFLQEIVDVMDLPATVINGRAEE---QA 130
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
CD+++ARA+A ++ LL Y+ P+ +
Sbjct: 131 VKCDIVTARAVAPMERLLGYAQPYFQR 157
>gi|148555756|ref|YP_001263338.1| methyltransferase GidB [Sphingomonas wittichii RW1]
gi|189040720|sp|A5VA84|RSMG_SPHWW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148500946|gb|ABQ69200.1| methyltransferase GidB [Sphingomonas wittichii RW1]
Length = 217
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 21/151 (13%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSI 74
V R T+ LE + L + NL+++ST E W RH+ DS QL P P
Sbjct: 15 RVPRGTMAGLEKLVAMILDEMPRQNLIAASTAESIWTRHIVDS---AQLVPMVGKGGPLR 71
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
WIDLGSG GFPG++ ++ L + + L+ES+ K+ FLR++ + A R+
Sbjct: 72 WIDLGSGAGFPGMVVALMLPELR---MTLVESRRKRIDFLRFMAESLG-----IADRVTV 123
Query: 135 APQMI-----TTCDVISARALADLDTLLEYS 160
A Q + + DVISARA A LD LL +
Sbjct: 124 AGQRLEMLESSPHDVISARAFAPLDRLLPLA 154
>gi|197106983|ref|YP_002132360.1| glucose inhibited division protein B [Phenylobacterium zucineum
HLK1]
gi|196480403|gb|ACG79931.1| glucose inhibited division protein B [Phenylobacterium zucineum
HLK1]
Length = 253
Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
LE F + +NLV T+ DFW RH DS ++ +L P +W DLG+G GFPG++
Sbjct: 63 LERFLAKLEAGNAVMNLVGPKTLPDFWNRHAWDSAQLLKLAPDARVWADLGAGAGFPGLV 122
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I G V+L+ES K+ FL VV + V R + + D+++AR
Sbjct: 123 LAILGKGRPGFHVHLVESMAKRCRFLTEVVTELGLPATVHNERAE---NLDLAVDIVTAR 179
Query: 149 ALADLDTLLEYSFPWL 164
A A L LL Y+ P+L
Sbjct: 180 ACAPLGRLLGYARPYL 195
>gi|163796496|ref|ZP_02190456.1| phosphoenolpyruvate carboxykinase [alpha proteobacterium BAL199]
gi|159178346|gb|EDP62890.1| phosphoenolpyruvate carboxykinase [alpha proteobacterium BAL199]
Length = 201
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFP 85
++L + L +KW +INLV+ +++ D W RHV DS ++ + + P +DLGSG GFP
Sbjct: 18 DRLAAYVALLVKWQARINLVAPASLPDVWSRHVLDSGQLARHMDGKPGPVLDLGSGAGFP 77
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G++ +I + G + L+E+ +K +FL+ + T + CRI EA + I ++
Sbjct: 78 GLVLAI----LGRGDITLVEADRRKVAFLQEAARVTDTNVAIECCRI-EALRPI-RAGIV 131
Query: 146 SARALADLDTLLEYSFPWL 164
+ARALA + LL Y+ P++
Sbjct: 132 TARALASVSELLHYARPYV 150
>gi|295691566|ref|YP_003595259.1| methyltransferase Gidb [Caulobacter segnis ATCC 21756]
gi|295433469|gb|ADG12641.1| methyltransferase GidB [Caulobacter segnis ATCC 21756]
Length = 221
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L F L +W++ +NLV T+ +W RH DS ++ L P + W DLG+G G PG++
Sbjct: 37 LARFQELLAEWNEVMNLVGPLTIATYWTRHALDSSQLLDLAPEANTWADLGAGAGLPGVV 96
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I L G V+L+ES K+ FL V + ++ R ++ + ++++AR
Sbjct: 97 LAILLKGRAGAKVHLVESMAKRCRFLEVVAKDLDLPVQIHNARAED---LKLKVEIVTAR 153
Query: 149 ALADLDTLLEYSFPWL 164
A A + LL ++ P+L
Sbjct: 154 ACAPMTKLLGFAEPYL 169
>gi|157825213|ref|YP_001492933.1| 16S rRNA methyltransferase GidB [Rickettsia akari str. Hartford]
gi|166224607|sp|A8GM00|RSMG_RICAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157799171|gb|ABV74425.1| glucose-inhibited division protein B [Rickettsia akari str.
Hartford]
Length = 191
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
VSRE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VSREIIEKLEIFQKLVKKWNKSINLVSGNTIHNFWQRHILDSLQLMQYIDNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG GFPGI+ SI G+ V+LIE+ +K FL + + Q +
Sbjct: 63 SGAGFPGIVLSI------AGVAKVSLIEADLRKCIFLE---KASKISNNNIQIINQRIEK 113
Query: 138 MITTCDVISARALADLDTL 156
+ C +++ RA + L+T+
Sbjct: 114 VAIDCSILTCRAFSKLNTI 132
>gi|294675619|ref|YP_003576234.1| methyltransferase GidB [Rhodobacter capsulatus SB 1003]
gi|294474439|gb|ADE83827.1| methyltransferase GidB [Rhodobacter capsulatus SB 1003]
Length = 196
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSI-- 91
L KW+ INLVS T+ + W RH DS ++ + + P W DLGSGGGFPG++ +
Sbjct: 16 LLKKWNPAINLVSPRTLVEVWTRHFLDSAQILRSVDHAPQHWADLGSGGGFPGLVVGVLA 75
Query: 92 --QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
Q + + L+ES +KA+FL V+ V RI+ + DV+SARA
Sbjct: 76 KEQFPDMR---LTLVESDKRKAAFLLNAVRDLGLSAVVADKRIESLEPL--KADVLSARA 130
Query: 150 LADLDTLLEYS 160
LA L+TLL Y+
Sbjct: 131 LAPLETLLAYA 141
>gi|67458510|ref|YP_246134.1| glucose-inhibited division protein B [Rickettsia felis URRWXCal2]
gi|75537023|sp|Q4UN89|RSMG_RICFE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|67004043|gb|AAY60969.1| Predicted S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia felis URRWXCal2]
Length = 192
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 4 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLMQYIDNKEIHLVDIG 63
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG GFPGI+ SI G+ V+LIE+ +K FL K + + E +
Sbjct: 64 SGAGFPGIVLSI------AGVAKVSLIEADLRKCIFLEK-ASKISNNNIQIINQRIEKVE 116
Query: 138 MITTCDVISARALADLDTL 156
+ C +++ RA + L+T+
Sbjct: 117 I--DCSILTCRAFSKLNTI 133
>gi|51473286|ref|YP_067043.1| glucose-inhibited division protein B [Rickettsia typhi str.
Wilmington]
gi|81610838|sp|Q68XT1|RSMG_RICTY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51459598|gb|AAU03561.1| glucose inhibited division protein B [Rickettsia typhi str.
Wilmington]
Length = 191
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V E ++KL+ L KW+K INL+S +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VPSEIIQKLDILQNLIKKWNKSINLISDNTIPNFWQRHILDSLQLMQYISNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG GFPGI+ SI G+ V+LIE+ +K FL + + ++ RI++
Sbjct: 63 SGAGFPGIVLSI------AGVAKVSLIEADLRKCIFLEKASKISNNSIQIINQRIEKIE- 115
Query: 138 MITTCDVISARALADLDTL 156
C++++ RA ++L+T+
Sbjct: 116 --IDCNILTCRAFSNLNTI 132
>gi|94496561|ref|ZP_01303137.1| glucose inhibited division protein B [Sphingomonas sp. SKA58]
gi|94423921|gb|EAT08946.1| glucose inhibited division protein B [Sphingomonas sp. SKA58]
Length = 214
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPY 71
+L + ++VSR T ++LE F + L + NL++ ST W RH+ DS ++ L
Sbjct: 9 WLRSHFDVSRGTWDQLERFVAILLSAMDEQNLIAESTRTQIWARHIVDSAQLLLLVEGAA 68
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFAC 130
W+DLG+G G PG + ++ + V +IE++ K+ FL V+ + VF
Sbjct: 69 TGTWVDLGAGAGLPGAV----IACLGKQPVLMIEARRKRVDFLNAVIAELGLQHADVFGG 124
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSF 161
R++ P M VISARA A LD LL +
Sbjct: 125 RVESVPAM--QAAVISARAYAPLDKLLHSAL 153
>gi|15892008|ref|NP_359722.1| glucose-inhibited division protein B [Rickettsia conorii str.
Malish 7]
gi|229586297|ref|YP_002844798.1| 16S rRNA methyltransferase GidB [Rickettsia africae ESF-5]
gi|20138266|sp|Q92JI2|RSMG_RICCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|259495619|sp|C3PM95|RSMG_RICAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15619123|gb|AAL02623.1| glucose inhibited division protein B [Rickettsia conorii str.
Malish 7]
gi|228021347|gb|ACP53055.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia africae ESF-5]
Length = 192
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 4 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 63
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG G PGI+ SI G+ V+LIE+ +K FL K + + E +
Sbjct: 64 SGSGLPGIVLSI------AGVAQVSLIEADLRKCIFLEK-ASKISNNNIQIINQRIEKVE 116
Query: 138 MITTCDVISARALADLDTL 156
+ C +++ RA ++L+T+
Sbjct: 117 I--DCSILTCRAFSNLNTI 133
>gi|157964123|ref|YP_001498947.1| 16S rRNA methyltransferase GidB [Rickettsia massiliae MTU5]
gi|189040815|sp|A8F0G4|RSMG_RICM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157843899|gb|ABV84400.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia massiliae MTU5]
Length = 193
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 5 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 64
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG G PGI+ SI G+ V+LIE+ +K FL K + + E +
Sbjct: 65 SGSGLPGIVLSI------AGVAQVSLIEADLRKCIFLEK-ASKISNNNIQIINQRIEKIE 117
Query: 138 MITTCDVISARALADLDTL 156
+ C +++ RA ++L+T+
Sbjct: 118 I--DCSILTCRAFSNLNTI 134
>gi|34580956|ref|ZP_00142436.1| glucose inhibited division protein B [Rickettsia sibirica 246]
gi|28262341|gb|EAA25845.1| glucose inhibited division protein B [Rickettsia sibirica 246]
Length = 191
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG G PGI+ SI G+ V+LIE+ +K FL K + + E +
Sbjct: 63 SGSGLPGIVLSI------AGVAQVSLIEADLRKCIFLEK-ASKISNNNIQIINQRIEKVE 115
Query: 138 MITTCDVISARALADLDTL 156
+ C +++ RA ++L+T+
Sbjct: 116 I--DCSILTCRAFSNLNTI 132
>gi|114571501|ref|YP_758181.1| methyltransferase GidB [Maricaulis maris MCS10]
gi|122314958|sp|Q0AKF0|RSMG_MARMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114341963|gb|ABI67243.1| 16S rRNA m(7)G-527 methyltransferase [Maricaulis maris MCS10]
Length = 207
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--ID 77
VSRETL+ E + L ++ + NLV ST++ FW RH DS ++ + H + D
Sbjct: 11 GVSRETLDGFETWRALLVETNAHTNLVGRSTLDQFWARHAMDSYQLLE-HVGADVTKIAD 69
Query: 78 LGSGGGFPGIITSIQL-SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
LG+G GFPGI ++ L + V L++S KK +FLR + A + R+ E
Sbjct: 70 LGAGAGFPGIALALGLRDRQQAAHVTLVDSVGKKVAFLRKTIAALALDADARSVRV-ETL 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
D+I+ARA A L+ LL Y+ P L +
Sbjct: 129 DPAEGFDLITARAFAPLNKLLGYASPLLKNR 159
>gi|303240049|ref|ZP_07326570.1| methyltransferase GidB [Acetivibrio cellulolyticus CD2]
gi|302592318|gb|EFL62045.1| methyltransferase GidB [Acetivibrio cellulolyticus CD2]
Length = 242
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 17 NTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
N +N+ + E EK + + +W++KINL + D I+H DSL + L +I
Sbjct: 17 NEFNIPLNEEQAEKFFKYKNVLKEWNEKINLTAIEDDRDIIIKHFIDSLSILPLIKGDNI 76
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFPGI I SIE V L++S +K+ FL V+++ G K R
Sbjct: 77 KLIDVGTGAGFPGIPVKIARESIE---VTLLDSLDKRVKFLNEVIKEDGLTGIKALHGRA 133
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
+E P+ D+ +ARA+A L L+EY P++
Sbjct: 134 EEKAVLPEFREKYDICTARAVASLPVLIEYCLPFV 168
>gi|91206166|ref|YP_538521.1| glucose-inhibited division protein B [Rickettsia bellii RML369-C]
gi|157826532|ref|YP_001495596.1| 16S rRNA methyltransferase GidB [Rickettsia bellii OSU 85-389]
gi|122425160|sp|Q1RGT2|RSMG_RICBR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224608|sp|A8GUR2|RSMG_RICB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91069710|gb|ABE05432.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia bellii RML369-C]
gi|157801836|gb|ABV78559.1| glucose-inhibited division protein B [Rickettsia bellii OSU 85-389]
Length = 192
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 82/144 (56%), Gaps = 12/144 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
+V E +EKL+ F L KW+K INL+S ++ ++FW RH+ DSL++ Q I +D+
Sbjct: 3 DVPHEVIEKLQIFQDLVQKWNKAINLISENSTQNFWKRHILDSLQLIQYINDKEIHLVDI 62
Query: 79 GSGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
GSG GFPGII SI G+ +LIE+ +K FL K + + E
Sbjct: 63 GSGAGFPGIILSI------AGVASTSLIEADLRKCIFLEKAA-KISNNNIQIINQRIEKT 115
Query: 137 QMITTCDVISARALADLDTLLEYS 160
++ +C++++ RA ++L+T+ + +
Sbjct: 116 EI--SCNILTCRAFSNLNTIFDCT 137
>gi|254292378|ref|YP_003058401.1| methyltransferase GidB [Hirschia baltica ATCC 49814]
gi|254040909|gb|ACT57704.1| methyltransferase GidB [Hirschia baltica ATCC 49814]
Length = 216
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
R+ L + +VSRET +K+ + KW K NL+ W RH+ DSL+V+Q
Sbjct: 11 FRSKDLSDYLDVSRETFDKINIVVEVLDKWRKTHNLIGPLERNRLWRRHILDSLQVYQYR 70
Query: 70 P-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
S WIDLGSG GFP +I + + E L+ES KK +FLR + V
Sbjct: 71 SDNASKWIDLGSGAGFPALIMACASGNAEEKYT-LVESNGKKCAFLRAAARAANLNISVE 129
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
RI+ + T D +++RALA L L +YS +L K
Sbjct: 130 NSRIESVSR--ETYDHVTSRALASLPQLYDYSERFLANK 166
>gi|329847388|ref|ZP_08262416.1| 16S rRNA methyltransferase GidB [Asticcacaulis biprosthecum C19]
gi|328842451|gb|EGF92020.1| 16S rRNA methyltransferase GidB [Asticcacaulis biprosthecum C19]
Length = 213
Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++V +E ++ L F + ++ +NLV T+ +W RHV DS ++ L P W DL
Sbjct: 12 FHVKQEAVDDLTAFGAMVADKNEVMNLVGPLTLPHYWSRHVLDSAQLLNLRPNAQTWADL 71
Query: 79 GSGGGFPGIITSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+G GFPG++ +I L + + V LI+S K+ FL VV + A V R A
Sbjct: 72 GAGAGFPGVVLAILLKHTADAPNVYLIDSLAKRCRFLEAVVAELALPAVVINDR---AEN 128
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ DV++ARA A + LL ++
Sbjct: 129 LNLRVDVVTARACAPMTRLLGFA 151
>gi|103488332|ref|YP_617893.1| methyltransferase GidB [Sphingopyxis alaskensis RB2256]
gi|123379470|sp|Q1GP62|RSMG_SPHAL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|98978409|gb|ABF54560.1| methyltransferase GidB [Sphingopyxis alaskensis RB2256]
Length = 233
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
+L + S E ++E F + + + K NL+++ST+ W RH+ DS ++ L
Sbjct: 28 GWLTQAFAPSTEQWAQIERFVTMLIAENAKQNLIAASTIPAIWARHIADSAQLLALDTRE 87
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+WIDLGSG G PG++ +I + + L+ES+ ++ FLR VV + A +
Sbjct: 88 GEGLWIDLGSGPGLPGLVVAI----LSERPMLLVESRRRRCDFLRAVVAELA----LDHV 139
Query: 131 RIQEAP-QMITT--CDVISARALADLDTLLEYS 160
+ EAP + + T ISARA A LD L++ S
Sbjct: 140 EVAEAPLERVATRPAATISARAFAPLDRLIDLS 172
>gi|159045996|ref|YP_001534790.1| methyltransferase GidB [Dinoroseobacter shibae DFL 12]
gi|189039385|sp|A8LPC4|RSMG_DINSH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157913756|gb|ABV95189.1| methyltransferase GidB [Dinoroseobacter shibae DFL 12]
Length = 195
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGI 87
L+ F L KWS +INLV+ ST + W RH+ DS +++ P + IDLGSGGG P +
Sbjct: 9 LKVFERLIRKWSPRINLVAPSTYDQTWERHILDSAQLYDFLPSTADKVIDLGSGGGLPVV 68
Query: 88 ITSIQLSSIEGGLVNL--IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
+ + L+ G + IES +K +FLR ++ V RI+ A + +VI
Sbjct: 69 VLGV-LAKHRGCRIKFTAIESDARKCAFLRTAARELQINLSVITSRIEAA--NVEPGNVI 125
Query: 146 SARALADLDTLLEYSFP 162
+ARALA + LLE++ P
Sbjct: 126 TARALAPVSKLLEFAEP 142
>gi|331703898|ref|YP_004400585.1| methyltransferase GidB (glucose inhibited division protein B)
[Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328802453|emb|CBW54608.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 231
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+ +++E KL +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 13 NFTINQEIKNKLNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQIIDQKIA 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPG++ I +I+ + LIES NKKA+FL+Y+VQK ++ R +E
Sbjct: 73 DIGTGAGFPGVVLKIFFPNIK---LTLIESNNKKANFLKYLVQKLELNDVEILNKRAEEL 129
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q D++ +RA+A LD +LE
Sbjct: 130 NQYKEQFDIVISRAVAYLDIILE 152
>gi|256384435|gb|ACU79005.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256385267|gb|ACU79836.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455461|gb|ADH21696.1| 16S rRNA methyltransferase GidB [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 231
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+ +++E KL +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 13 NFTINQEIKNKLNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQIIDQKIA 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPG++ I +I+ + LIES NKKA+FL+Y+VQK ++ R++E
Sbjct: 73 DIGTGAGFPGVVLKIFFPNIK---LTLIESNNKKANFLKYLVQKLELNDVEILNKRVEEL 129
Query: 136 PQMITTCDVISARALADLDTLLE 158
+ D++ +RA+A LD +LE
Sbjct: 130 NEYKEQFDIVISRAVAYLDIILE 152
>gi|238650524|ref|YP_002916376.1| glucose-inhibited division protein B [Rickettsia peacockii str.
Rustic]
gi|238624622|gb|ACR47328.1| glucose-inhibited division protein B [Rickettsia peacockii str.
Rustic]
Length = 191
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V RE ++KLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+G
Sbjct: 3 VPREIIKKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG G PGI+ SI G+ V+LIE+ +K FL K + + E +
Sbjct: 63 SGSGLPGIVLSI------AGVAQVSLIEADLRKCIFLEK-ASKISNNNIQIINQRIEKVE 115
Query: 138 MITTCDVISARALADLDTL 156
+ C +++ RA ++L+T+
Sbjct: 116 I--DCSILTFRAFSNLNTI 132
>gi|94967073|ref|YP_589121.1| methyltransferase GidB [Candidatus Koribacter versatilis Ellin345]
gi|189039371|sp|Q1IVQ3|RSMG_ACIBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94549123|gb|ABF39047.1| 16S rRNA m(7)G-527 methyltransferase [Candidatus Koribacter
versatilis Ellin345]
Length = 219
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-RVFQ 67
I R LL+ V+ LE++ + L LKW+ ++NL + E +RH +SL +
Sbjct: 15 IARIAELLDPIVVAERQLEQISVYLDLLLKWNARMNLTAVRDPEQIVLRHFGESLFAARE 74
Query: 68 LHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-A 123
L P P +D+GSG GFPG+ +I+ + V LIE+ KKA+FL+ VV+ T
Sbjct: 75 LFPDPDATGSLVDVGSGAGFPGVPIAIERPGLS---VTLIEAHGKKATFLKEVVRSTRLT 131
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
V A R +E + DV++ RA+ + ++L S
Sbjct: 132 NASVQAIRAEE---YVGVADVVTMRAVEEFASILPVS 165
>gi|239946970|ref|ZP_04698723.1| 16S rRNA methyltransferase GidB [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921246|gb|EER21270.1| 16S rRNA methyltransferase GidB [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 190
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 79/139 (56%), Gaps = 13/139 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
+ RE +EKLE F L KW+K INLVS+S + +FW RH+ DSL++ Q I +D+G
Sbjct: 3 IPREIIEKLEIFQKLVKKWNKSINLVSNS-IHNFWQRHILDSLQLIQYIDNKEIHLVDIG 61
Query: 80 SGGGFPGIITSIQLSSIEGGL--VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
SG GFPGI+ SI G+ V+LIE+ +K FL K + + E +
Sbjct: 62 SGSGFPGIVLSI------AGVAKVSLIEADLRKCIFLEK-ASKISNNNIQIINQRIEKVE 114
Query: 138 MITTCDVISARALADLDTL 156
+ C +++ RA ++L+T+
Sbjct: 115 I--DCSILTCRAFSNLNTI 131
>gi|332186973|ref|ZP_08388714.1| 16S rRNA methyltransferase GidB [Sphingomonas sp. S17]
gi|332012983|gb|EGI55047.1| 16S rRNA methyltransferase GidB [Sphingomonas sp. S17]
Length = 204
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPG 86
K+++F L + + + NL++ ST+ W RH DSL++ L WID+G+GGGFPG
Sbjct: 21 KIDWFLNLVIVENDQQNLIAPSTIATIWARHALDSLQLIPLADRADGQWIDIGTGGGFPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVFACRIQEAPQMITTCDV 144
++ ++ G V L+E + ++A FLR + A R V A +I+ + D+
Sbjct: 81 MVVALAWP----GQVALVEPRKRRAEFLRDCAETLGVADRVTVHASKIE---SVQAKADI 133
Query: 145 ISARALADLDTLLEYS 160
ISARA+A ++ LL +
Sbjct: 134 ISARAVATVENLLRAA 149
>gi|148656341|ref|YP_001276546.1| 16S rRNA methyltransferase GidB [Roseiflexus sp. RS-1]
gi|189040818|sp|A5UVE3|RSMG_ROSS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148568451|gb|ABQ90596.1| methyltransferase GidB [Roseiflexus sp. RS-1]
Length = 234
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 13 NYLLNT-----YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VF 66
+ LLNT + + +E+ + W+ ++NL + + E RH DSLR
Sbjct: 2 DMLLNTARAWGLRLDQRQIEQFARYSAELRAWNTRVNLTAITDEEGIVARHFLDSLRCAL 61
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
PS ID+GSG GFPG+ I + V L+ES KKA+FLR+++ R
Sbjct: 62 SWGDAPSSLIDIGSGAGFPGLPLKILRPELR---VALVESVGKKAAFLRHMITVLDLRDV 118
Query: 126 KVFACR---IQEAPQMITTCDVISARALADLDTLLEYSFP 162
V R + PQ DV++ARA+A+L TL EY P
Sbjct: 119 TVLTARAETVGRDPQHREQYDVVTARAVAELATLAEYCLP 158
>gi|322437343|ref|YP_004219555.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX9]
gi|321165070|gb|ADW70775.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX9]
Length = 207
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
Y + E + +L + L L+W+ + NL + E+ RH +SL P + +DL
Sbjct: 25 YPATDELITQLSDYLDLLLRWNARTNLTAIRDPEEIVTRHFGESLFAAANLPEGNTLLDL 84
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFPG+ IQL+ ++ LV L ES+NKK++FLR ++ + +V A R A +
Sbjct: 85 GSGAGFPGL--PIQLAHLD-LLVTLAESQNKKSTFLREAIRTLGLKTQVHAAR---AETL 138
Query: 139 ITTCDVISARALADL 153
D+++ RA+ D+
Sbjct: 139 TAPFDIVTLRAVDDM 153
>gi|309792061|ref|ZP_07686535.1| methyltransferase GidB [Oscillochloris trichoides DG6]
gi|308225868|gb|EFO79622.1| methyltransferase GidB [Oscillochloris trichoides DG6]
Length = 238
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDL 78
N++ L++L ++ L +W+++INL + + + + + RH DSL + + P +D+
Sbjct: 19 NLNPTQLDQLAHYAQLLREWNERINLTTITDLGEIYRRHFLDSLSLARFWGTGPQSLVDI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
GSG GFPG++ I + + L+ES KKA F+R+V ++ +V R ++ +
Sbjct: 79 GSGAGFPGLVLKILRPELR---LTLVESVGKKAEFMRHVARELNLYAVRVLDVRAEDVGR 135
Query: 138 MI---TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A+L L+EY+ P L
Sbjct: 136 NAAERAKHDLVTARAVAELRVLVEYALPLL 165
>gi|320109303|ref|YP_004184893.1| methyltransferase GidB [Terriglobus saanensis SP1PR4]
gi|319927824|gb|ADV84899.1| methyltransferase GidB [Terriglobus saanensis SP1PR4]
Length = 196
Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EKL + L LKW+ + NL + E RH +SL + L P S +D GSG GFPG
Sbjct: 21 EKLAQYLELILKWNARTNLTAVRDAEGIVRRHFGESLFLGGLLPEFSTLLDFGSGAGFPG 80
Query: 87 IITSI--QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
I + LS V L ES+ KKASFLR V+ A V+A R++ P+ T DV
Sbjct: 81 IPVQLIRPLSK-----VTLAESQGKKASFLREAVRSLAIPSDVWAARVETMPES-KTFDV 134
Query: 145 ISARAL 150
++ RA+
Sbjct: 135 VAMRAV 140
>gi|225873766|ref|YP_002755225.1| methyltransferase GidB [Acidobacterium capsulatum ATCC 51196]
gi|225791675|gb|ACO31765.1| methyltransferase GidB [Acidobacterium capsulatum ATCC 51196]
Length = 219
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---IWID 77
VS E+L F L LKW+ + NL + E RH DS VF P +D
Sbjct: 24 VSGAEAERLGAFLALLLKWNARTNLTAIREPEQMVRRHFADS--VFCARNLPEGTKTLLD 81
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPGI ++ + V L ES+ +KASFLR V+ R +V+A R++E P
Sbjct: 82 FGSGGGFPGIPVALLRPEVS---VTLAESQGRKASFLREAVRSLGLRAEVWAERVEEMP- 137
Query: 138 MITTC-DVISARAL 150
+ C D ++ RA+
Sbjct: 138 -VGRCFDCVTLRAV 150
>gi|291543433|emb|CBL16542.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus sp. 18P13]
Length = 235
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
++ E EKL+ + +++++K+NL + + ED I+H DS+ + + P + ID
Sbjct: 18 ELTPECYEKLDCYASFLVEYNEKVNLTALTAPEDVLIKHFLDSMLLTKYIEIPLGAALID 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-- 135
+G+G GFP + + + V L++S NK+ FL+ + +K + R +EA
Sbjct: 78 VGTGAGFPSVPVLLLRQDLH---VTLLDSLNKRIVFLQLLAEKLGLEVRCIHGRAEEAAR 134
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWL 164
P++ DV +ARA+A L TL EY P++
Sbjct: 135 KPELREKFDVATARAVAALPTLAEYCLPFV 164
>gi|156743304|ref|YP_001433433.1| 16S rRNA methyltransferase GidB [Roseiflexus castenholzii DSM
13941]
gi|189040817|sp|A7NPB9|RSMG_ROSCS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156234632|gb|ABU59415.1| methyltransferase GidB [Roseiflexus castenholzii DSM 13941]
Length = 234
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWIDLGSGGGF 84
+E+ + W+ ++NL S + + RH DSLR PS ID+GSG GF
Sbjct: 20 IEQFARYSAELRAWNMRVNLTSITDEREIVTRHFLDSLRCALSWGDTPSRLIDIGSGAGF 79
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR---IQEAPQMIT 140
PG+ I + V L+ES KKA+FL+++V R V R + PQ
Sbjct: 80 PGLPLKILHPELH---VTLVESVGKKAAFLQHIVAVLDLRDVTVVTARAEVVGRDPQHRE 136
Query: 141 TCDVISARALADLDTLLEYSFP 162
DV++ARA+A+L TL+EY P
Sbjct: 137 QYDVVTARAVAELATLVEYGLP 158
>gi|188588844|ref|YP_001922715.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
gi|226796820|sp|B2V1U8|RSMG_CLOBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188499125|gb|ACD52261.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
Length = 239
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S+E EK + L +W++K+NL + + ED +H DS++ F+ + ID+
Sbjct: 18 LSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEDIIKKHFIDSIKAFKRDEFKEAKTLIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++ +
Sbjct: 78 GTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAEDGAR 134
Query: 138 ---MITTCDVISARALADLDTLLEYSFPWL 164
+ + D+ ++RA+A++ L E+ P++
Sbjct: 135 QKNLRESFDIATSRAVANMSVLSEFCLPYV 164
>gi|251780390|ref|ZP_04823310.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084705|gb|EES50595.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 239
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S+E EK + L +W++K+NL + + ED +H DS++ F+ + ID+
Sbjct: 18 LSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEDIIKKHFIDSIKAFKRDEFKKAKTLIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++ +
Sbjct: 78 GTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAEDGAR 134
Query: 138 ---MITTCDVISARALADLDTLLEYSFPWL 164
+ + D+ ++RA+A++ L E+ P++
Sbjct: 135 QKNLRESFDIATSRAVANMSVLSEFCLPYV 164
>gi|299143473|ref|ZP_07036553.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517958|gb|EFI41697.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 232
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-- 73
+ + + + LEKLE + L L W+ K+NL + + ++ I+H DSL +F+ + +
Sbjct: 7 IEEFGLKTDCLEKLEQYRELLLSWNDKMNLTAITEEDEVNIKHFLDSLSLFKTNYFDGSK 66
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFPGI+ I + + L +S NK+ FL V+++ + R
Sbjct: 67 SVIDIGTGAGFPGIVLKIYNEDLN---ITLFDSLNKRLLFLNDVIERLKLKDIYTLHGRA 123
Query: 133 QEAPQMIT--TC-DVISARALADLDTLLEYSFPWL 164
+E + T C D+ +RA+A+L TLLEY P++
Sbjct: 124 EEFGRKDTHRECYDIAVSRAVANLTTLLEYDLPFV 158
>gi|20809123|ref|NP_624294.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Thermoanaerobacter tengcongensis MB4]
gi|254479393|ref|ZP_05092726.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
gi|22095716|sp|Q8R6L0|RSMG_THETN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|20517803|gb|AAM25898.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Thermoanaerobacter
tengcongensis MB4]
gi|214034662|gb|EEB75403.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
Length = 239
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGG 83
+E + FY L L+W++K+NL + + E+ I+H DSL V + ID+G+G G
Sbjct: 25 VEHFQKFYSLLLEWNQKMNLTAITEEEEVVIKHFLDSLSVIKSGKIKGGEKVIDIGTGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMI 139
FPGI I I GL L+E+ KK +FL ++ Q G +V R +E +
Sbjct: 85 FPGIPLKIVFPEI--GL-TLLEASKKKVNFLNFLSQVLLFEGIEVIHGRAEELGKVERFR 141
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+ +ARA+A L+ LLEY+ P++
Sbjct: 142 EKFDIATARAVAPLNILLEYAVPFV 166
>gi|332800540|ref|YP_004462039.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
sp. Re1]
gi|332698275|gb|AEE92732.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
sp. Re1]
Length = 238
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 84/151 (55%), Gaps = 11/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PYPSIWID 77
+S E + +L+ F L L+ +K +NL S + EDF +HV DSL + + H + + +D
Sbjct: 19 LSDEQILQLDVFRSLLLERNKMVNLTSITEPEDFAKKHVIDSLMIVK-HIEIDHEAKIMD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAP 136
+G+G G PG+I I IE ++L+ES KK FLR V+ K + +V R +E
Sbjct: 78 VGTGPGIPGLILKIYRPDIE---LSLLESVRKKTDFLRDVIGKMNISDVQVINGRAEEVG 134
Query: 137 QMIT---TCDVISARALADLDTLLEYSFPWL 164
I + D++ ARA++ L+ LLE P++
Sbjct: 135 HDIKHRESYDIVVARAVSSLNVLLELCLPFV 165
>gi|159896713|ref|YP_001542960.1| 16S rRNA methyltransferase GidB [Herpetosiphon aurantiacus ATCC
23779]
gi|159889752|gb|ABX02832.1| methyltransferase GidB [Herpetosiphon aurantiacus ATCC 23779]
Length = 236
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 20/154 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDL 78
+S +++LE++ L +WS+++NLV+ ST+ + RH+ DS + P+ D+
Sbjct: 17 TLSTSQIDRLEHYVALLTQWSERMNLVAPSTLPEATRRHLLDSFSLATTCEQAPASLADI 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFA- 129
GSG G PGI +I E V LIES +KKA FLR+V Q+ R +V
Sbjct: 77 GSGAGLPGIPLAILWPETE---VLLIESISKKAEFLRHVAQELQLERVLVEVERAEVVGR 133
Query: 130 -CRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R +E ++T ARA+A+L TL EY P
Sbjct: 134 ERRWREHFALVT------ARAVANLATLAEYCLP 161
>gi|83319743|ref|YP_424755.1| 16S rRNA methyltransferase GidB [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|3122152|sp|Q48960|RSMG_MYCCT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|950065|emb|CAA83698.1| methyltransferases [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|83283629|gb|ABC01561.1| methyltransferase gidB [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 231
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+ +++E KL +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 13 NFTINQEIKNKLNLYYQILIEENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKIA 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPGI+ I +I+ + LIES NKK +FL+Y+VQK ++ R +E
Sbjct: 73 DIGTGAGFPGIVLKIFFPNIK---LTLIESNNKKVNFLKYLVQKLNLNDVEILNKRAEEL 129
Query: 136 PQMITTCDVISARALADLDTLLE 158
+ D++ +RA+A L+ +LE
Sbjct: 130 NEYKEQFDIVISRAVAYLNIILE 152
>gi|89897799|ref|YP_521286.1| hypothetical protein DSY5053 [Desulfitobacterium hafniense Y51]
gi|219670948|ref|YP_002461383.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
gi|122480419|sp|Q24MA0|RSMG_DESHY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89337247|dbj|BAE86842.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219541208|gb|ACL22947.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
Length = 239
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+S + +EK + ++W++K+NL S + E+ ++H DSL + L + D+G
Sbjct: 20 ELSGDQIEKFSIYADRLVEWNEKVNLTSITEPEEIILKHFVDSLALLSLVQGKRLA-DIG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACR 131
+G GFPGI I L +E V L++S K+ FL V VQ AR + FA
Sbjct: 79 TGAGFPGIPLKILLPEVE---VYLVDSLAKRLDFLETVIKELKLTKVQTVHARAEDFA-- 133
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
P T D +++RA+A L LLEY+ P L
Sbjct: 134 --RDPHYRETFDCVTSRAVARLPVLLEYAVPLL 164
>gi|85709800|ref|ZP_01040865.1| glucose inhibited division protein B [Erythrobacter sp. NAP1]
gi|85688510|gb|EAQ28514.1| glucose inhibited division protein B [Erythrobacter sp. NAP1]
Length = 213
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 17/146 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-------PSIWIDLGS 80
+L + L L +++ NL+S + E W RH+ DS ++ + P P W+DLG+
Sbjct: 28 RLHEYAGLLLAENQQQNLISKPSEEQLWERHIADSAQLLEHVPRETYGDGAPGPWLDLGT 87
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ-EAPQMI 139
G G PG++ +I I+ V L+ES+ ++ FL V + + CRI+ + + +
Sbjct: 88 GPGLPGLVIAILCPKID---VVLVESRGRRVEFLEDCVTRLGLKN----CRIEGQRLERV 140
Query: 140 TTCD--VISARALADLDTLLEYSFPW 163
+ + VISARA A LD L+ S P+
Sbjct: 141 SPFESWVISARAFASLDKLIALSAPF 166
>gi|315497187|ref|YP_004085991.1| methyltransferase gidb [Asticcacaulis excentricus CB 48]
gi|315415199|gb|ADU11840.1| methyltransferase GidB [Asticcacaulis excentricus CB 48]
Length = 214
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++V + L+ L F + + ++ +NLV +T+ +W RHV DS ++ P W DL
Sbjct: 12 FHVKQAALDDLTRFAKVLAERNEVMNLVGPATLPHYWSRHVLDSAQLLNHAPDARTWADL 71
Query: 79 GSGGGFPGIITSIQLS--SIEGG------LVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
G+G GFPG++ +I L S + G V LI+S K+ FL VV+ V
Sbjct: 72 GAGAGFPGVVLAILLKHLSTDSGETPTDRRVFLIDSLAKRCRFLGEVVRDLDLPATVIND 131
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYS 160
R A + DV++ARA+A L L+ ++
Sbjct: 132 R---AENVSLKVDVVTARAMAPLPKLIGFA 158
>gi|71083058|ref|YP_265777.1| glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|123647185|sp|Q4FNR5|RSMG_PELUB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71062171|gb|AAZ21174.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 213
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 13 NY-LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI--RHVEDSLRVFQLH 69
NY LL NV RETL + + F + + ++KIN++S T ++ I RH+ DS ++ +
Sbjct: 7 NYPLLKNQNVPRETLIEFDLFISMLQEENEKINIISKETAKNEVIRERHIVDSAQIIEFV 66
Query: 70 PYPS-IWIDLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKV 127
S I D+GSGGG PGII SI + + + V+L E + K+SFLR V + +V
Sbjct: 67 DLNSNIITDIGSGGGMPGIIISIMIKNQKNLAKVHLYEKSHHKSSFLRKVSRDLKLNTEV 126
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLE 158
I EA ++ I ARA L +L+
Sbjct: 127 MQENIFEAEKL--DSGTIMARAFKPLPIILD 155
>gi|307297008|ref|ZP_07576824.1| methyltransferase GidB [Sphingobium chlorophenolicum L-1]
gi|306877534|gb|EFN08762.1| methyltransferase GidB [Sphingobium chlorophenolicum L-1]
Length = 211
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HP 70
+L ++V RET +LE + + L + NL++ ST W RH+ DS ++ L +
Sbjct: 8 QWLEQQFDVPRETWNRLERYVAILLAEMDRQNLIAESTRPHVWARHIVDSAQLIPLAANG 67
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
WIDLGSG G PGI+ +I + V ++ES+ K+ FL V+ + G VF
Sbjct: 68 GEGQWIDLGSGAGLPGIVVAI----LTDRPVQMVESRRKRIDFLNAVIAELHLSGASVFG 123
Query: 130 CRIQEAP 136
R++ P
Sbjct: 124 GRVEIVP 130
>gi|187933315|ref|YP_001887732.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
gi|238691667|sp|B2TRH8|RSMG_CLOBB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|187721468|gb|ACD22689.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
Length = 239
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S+E EK + L +W++K+NL + + E+ +H DS++ F+ + ID+
Sbjct: 18 LSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEEIIKKHFIDSIKAFKRDEFKEAKTLIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++ +
Sbjct: 78 GTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAEDGAR 134
Query: 138 ---MITTCDVISARALADLDTLLEYSFPWL 164
+ + D+ ++RA+A++ L E+ P++
Sbjct: 135 QKNLRESFDIATSRAVANMSVLSEFCLPYV 164
>gi|124026579|ref|YP_001015694.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. NATL1A]
gi|189040707|sp|A2C4M0|RSMG_PROM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123961647|gb|ABM76430.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. NATL1A]
Length = 248
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 12/152 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSI---WID 77
S + L + + L +W+KKINL +DFW V DS L +++ +P + +ID
Sbjct: 24 SEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSHKYID 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--ARGKVFACRIQEA 135
+GSG GFPGI +I + + + + L++S +KK +FL+ V ++ +R KV R +EA
Sbjct: 84 IGSGCGFPGIAIAIAMPNSD---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTERAEEA 140
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
P + D ARA+A + + EY P+L
Sbjct: 141 GRNPIFRSNFDYAIARAVASANVVAEYLVPFL 172
>gi|296284829|ref|ZP_06862827.1| glucose inhibited division protein B [Citromicrobium bathyomarinum
JL354]
Length = 213
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
KLE F ++ NL+S ST++ W RHV DS ++ P P W+D+G+G GFP
Sbjct: 24 KLEQFVAELRIEAEHQNLISRSTIDSVWQRHVADSAQLLDHVPRETPGTWLDIGTGAGFP 83
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFL-RYVVQKTAARGKVFACRIQEAPQMITTCDV 144
GI+T+I + L E + K+ ++L R V +V R+++ DV
Sbjct: 84 GIVTAIMRPDLPH---VLCEPRAKRVTWLERMVTLAKLGNCRVAGSRVEKVETF--AADV 138
Query: 145 ISARALADLDTLLEYS 160
ISARA A L L+ S
Sbjct: 139 ISARACASLKDLISLS 154
>gi|296125941|ref|YP_003633193.1| methyltransferase GidB [Brachyspira murdochii DSM 12563]
gi|296017757|gb|ADG70994.1| methyltransferase GidB [Brachyspira murdochii DSM 12563]
Length = 202
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLG 79
++ E KL + L + ++K +N+ + T EDF+ H+ DSL + H Y +I ID+G
Sbjct: 15 ITEENKNKLLKYANLVMDYNKNVNITGAKTTEDFFYDHIADSLLALNIFHDYDNI-IDIG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG P I +I ++ + L ESKNKK FLR ++ C A ++
Sbjct: 74 SGGGLPSIPLAIIYNNKK---FTLCESKNKKCEFLRLAKKELELNNIEIKC--INAYEIK 128
Query: 140 TTCDVISARALADLDTLLE 158
D +++RA +D+ TL++
Sbjct: 129 EKYDTVTSRAFSDISTLIK 147
>gi|291541855|emb|CBL14965.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus bromii L2-63]
Length = 237
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGS 80
E L++ E ++ L ++W++K+NL + + ++H DSL ++ + SI ID+G+
Sbjct: 21 EMLQRFEIYFKLLVEWNEKMNLTAITDEHGVAVKHFADSLTLYNFVDVKKNASI-IDVGT 79
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI- 139
G GFPG++ I I+ + L++S NK+ +FL V+ T ++ R +E +
Sbjct: 80 GAGFPGVVLKIARPDIK---LTLLDSLNKRLTFLDTVLNDTGLDSELVHSRAEEGGKNKL 136
Query: 140 --TTCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A L+ L EY P++
Sbjct: 137 YREKFDIAVSRAVARLNVLCEYCLPYV 163
>gi|218283288|ref|ZP_03489343.1| hypothetical protein EUBIFOR_01932 [Eubacterium biforme DSM 3989]
gi|218215978|gb|EEC89516.1| hypothetical protein EUBIFOR_01932 [Eubacterium biforme DSM 3989]
Length = 233
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ E + + E + L ++W++K+NL + + E+ W +H DS+ F + ++ D+GS
Sbjct: 17 LNEEQMNRFEKYMQLLIEWNEKMNLTAITQEEEVWEKHFYDSIMPFSNIDFETM-CDIGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMI 139
G GFPGI I + + L+E K+ FL V Q + R ++ +
Sbjct: 76 GAGFPGIPVKIAFPHVH---MTLVEPLQKRCRFLNEVKTQLNLENLDILNVRAEDLAKEK 132
Query: 140 TTC-DVISARALADLDTLLEYSFPWL 164
C DV+SARA+A L LLE P++
Sbjct: 133 RECFDVVSARAVAKLSILLELCVPFV 158
>gi|193806486|sp|Q46J33|RSMG_PROMT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 248
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 12/152 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSI---WID 77
S + L + + L +W+KKINL +DFW V DS L +++ +P + +ID
Sbjct: 24 SEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSHKYID 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--ARGKVFACRIQEA 135
+GSG GFPGI +I + + + L++S +KK +FL+ V ++ +R KV R +EA
Sbjct: 84 IGSGCGFPGIAIAIAMPNSN---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTERAEEA 140
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
P + D ARA+A + + EY P+L
Sbjct: 141 GRNPIFRSNFDYAIARAVASANVVAEYLVPFL 172
>gi|72382843|ref|YP_292198.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str.
NATL2A]
gi|72002693|gb|AAZ58495.1| 16S rRNA m(7)G-527 methyltransferase [Prochlorococcus marinus str.
NATL2A]
Length = 235
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 12/152 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSI---WID 77
S + L + + L +W+KKINL +DFW V DS L +++ +P + +ID
Sbjct: 11 SEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSHKYID 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--ARGKVFACRIQEA 135
+GSG GFPGI +I + + + L++S +KK +FL+ V ++ +R KV R +EA
Sbjct: 71 IGSGCGFPGIAIAIAMPNSN---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTERAEEA 127
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
P + D ARA+A + + EY P+L
Sbjct: 128 GRNPIFRSNFDYAIARAVASANVVAEYLVPFL 159
>gi|261368857|ref|ZP_05981740.1| 16S rRNA methyltransferase GidB [Subdoligranulum variabile DSM
15176]
gi|282569043|gb|EFB74578.1| 16S rRNA methyltransferase GidB [Subdoligranulum variabile DSM
15176]
Length = 234
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPS 73
+T+N+ S L+ L+ + L + +++K+NL + ++ E RH DSL +F P
Sbjct: 12 STWNIALSPAQLDLLDRYAELLVDYNQKVNLTAITSPEGIEDRHFADSL-LFAAQPEVTG 70
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RI 132
+D+G+G GFPG++ I ++ + L+E K+ FL+Y+ + G FA R
Sbjct: 71 KLVDVGTGAGFPGVVAKIYKPDLQ---LTLMEPTGKRVDFLKYLCGELGLTGIEFAKERA 127
Query: 133 QEAPQMI--TTCDVISARALADLDTLLEYSFPWLYQ 166
+EA + I DV ARA+A L L EY P + Q
Sbjct: 128 EEAARKIWREQFDVACARAVAALPVLCEYCLPLVRQ 163
>gi|257437747|ref|ZP_05613502.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
gi|257199762|gb|EEU98046.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
Length = 235
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDLG 79
++ E L++L+ F + + +++K+NL + + E +H DSL +F P +D+G
Sbjct: 18 LTGEQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSL-LFASQPEVAGKMVDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQM 138
+G GFPGI+T I +E + L+E K+ FL+Y + G FA R +EA +
Sbjct: 77 AGAGFPGIVTKIYKPELE---LTLMEPTGKRVEFLKYACAQLGLTGVEFAKERAEEAARK 133
Query: 139 I--TTCDVISARALADLDTLLEYSFPWL 164
D+ SARA+A L L EY P +
Sbjct: 134 AWREQFDLASARAVAALPMLAEYCLPLV 161
>gi|91762516|ref|ZP_01264481.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718318|gb|EAS84968.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 213
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 13 NY-LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR--HVEDSLRVFQ-L 68
NY LL NV RETL + F + ++KIN++S T ++ IR H+ DS ++ + +
Sbjct: 7 NYPLLKNQNVPRETLIDFDLFISMLQTENEKINIISKETAKNKVIRDRHIIDSAQIIEFV 66
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKV 127
SI D+GSGGG PGII SI + + + V+L E + K+SFLR V + +V
Sbjct: 67 DLNSSIITDIGSGGGMPGIIISIMIKNQKNSTKVHLYEKSHHKSSFLRKVSRDLKLNTEV 126
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLE 158
I EA + I ARA L +L+
Sbjct: 127 MQENIFEAENL--DSGTIMARAFKPLPIILD 155
>gi|149185270|ref|ZP_01863587.1| glucose inhibited division protein B [Erythrobacter sp. SD-21]
gi|148831381|gb|EDL49815.1| glucose inhibited division protein B [Erythrobacter sp. SD-21]
Length = 208
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 12/142 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSG 81
ET+EKLE + + +++ NLVS +++D W+RH DS ++ P + W DLGSG
Sbjct: 19 ETIEKLELLFNALREENERQNLVSRGSLDDVWVRHFADSAQLIPHVPRETKGPWFDLGSG 78
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ-EAPQMIT 140
GFPG++ ++ L E + L+ES+ ++ +L+ +V + + C I+ + +++
Sbjct: 79 AGFPGLVLAL-LRPDEPTV--LVESRKRRLEWLQAMVTRLG----LANCEIEGKRLELVD 131
Query: 141 T--CDVISARALADLDTLLEYS 160
T VISARA A L LL+ S
Sbjct: 132 TRKAAVISARAFAPLPKLLDLS 153
>gi|326404880|ref|YP_004284962.1| ribosomal RNA small subunit methyltransferase G [Acidiphilium
multivorum AIU301]
gi|325051742|dbj|BAJ82080.1| ribosomal RNA small subunit methyltransferase G [Acidiphilium
multivorum AIU301]
Length = 217
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 84/147 (57%), Gaps = 8/147 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVS--SSTVEDFWIRHVEDSLRVFQLHPYPSI-WID 77
VSRETL +LE F L L+W+ +INLVS + + W RH+ DSL++ L P + D
Sbjct: 24 VSRETLSRLEAFAALILRWTARINLVSRKDAAPAEIWSRHILDSLQMLPLVPQGAFRAAD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LGSGGG PG++ +I I LIES +KA+FL+ + + V + RI++A
Sbjct: 84 LGSGGGLPGLVLAIARPEIG---FTLIESDRRKAAFLQTAIAELKLNATVLSVRIEQA-- 138
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ +++ARALA L L Y+ P L
Sbjct: 139 RLEPSPLVTARALAALPVLFGYAAPLL 165
>gi|295103708|emb|CBL01252.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
SL3/3]
Length = 235
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 17 NTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPS 73
+T+N++ L++L+ F + + +++K+NL + + E +H DSL +F P
Sbjct: 12 STWNIALTGTQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSL-LFASQPEVAG 70
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RI 132
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA R
Sbjct: 71 RMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVDFLKYACAQLGLTGVEFAKERA 127
Query: 133 QEAPQMI--TTCDVISARALADLDTLLEYSFPWL 164
+EA + + D+ SARA+A L L EY P +
Sbjct: 128 EEAARKVWREQFDLASARAVAALPMLAEYCLPLV 161
>gi|160944277|ref|ZP_02091506.1| hypothetical protein FAEPRAM212_01786 [Faecalibacterium prausnitzii
M21/2]
gi|158444459|gb|EDP21463.1| hypothetical protein FAEPRAM212_01786 [Faecalibacterium prausnitzii
M21/2]
Length = 235
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 17 NTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPS 73
+T+N++ L++L+ F + + +++K+NL + + E +H DSL +F P
Sbjct: 12 STWNIALTGTQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSL-LFASQPEVAG 70
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RI 132
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA R
Sbjct: 71 RMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVEFLKYACAQLGLTGVEFAKERA 127
Query: 133 QEAPQMI--TTCDVISARALADLDTLLEYSFPWL 164
+EA + + D+ SARA+A L L EY P +
Sbjct: 128 EEAARKVWREQFDLASARAVAALPMLAEYCLPLV 161
>gi|148261391|ref|YP_001235518.1| methyltransferase GidB [Acidiphilium cryptum JF-5]
gi|189039374|sp|A5G167|RSMG_ACICJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146403072|gb|ABQ31599.1| 16S rRNA m(7)G-527 methyltransferase [Acidiphilium cryptum JF-5]
Length = 217
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 83/147 (56%), Gaps = 8/147 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVS--SSTVEDFWIRHVEDSLRVFQLHPYPSI-WID 77
VSRETL +LE F L L+W+ +INLVS + + W RH+ DSL++ L P + D
Sbjct: 24 VSRETLSRLEAFAALILRWTARINLVSRKDAAPAEIWNRHILDSLQMLPLVPQGAFRAAD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LGSGGG PG++ +I I LIES +KA+FL+ + + V RI++A
Sbjct: 84 LGSGGGLPGLVLAIARPEIG---FTLIESDRRKAAFLQTAIAELKLNATVLPVRIEQA-- 138
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ +++ARALA L L Y+ P L
Sbjct: 139 RLEPSPLVTARALAALPVLFGYAAPLL 165
>gi|296134492|ref|YP_003641739.1| methyltransferase GidB [Thermincola sp. JR]
gi|296033070|gb|ADG83838.1| methyltransferase GidB [Thermincola potens JR]
Length = 244
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWI 76
N+ ++ + E + L L+W+++INL S + V + I+H DSL + ++ + +
Sbjct: 21 NLDKKAVLLFETYKDLLLEWNQRINLTSITDVNEIAIKHFLDSLIILGEIEVKVQCRV-V 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPGI I + V L++S K+ +FLR V+ K + +V+ R +E
Sbjct: 80 DIGTGAGFPGIPLKIARPDLN---VVLVDSLQKRVAFLREVIDKLQLKNIEVYHGRAEEL 136
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
P+ + D+ ARA+A + L+EY+ P++
Sbjct: 137 GHYPEFRESFDLAVARAVAKMPVLVEYNLPFV 168
>gi|304439123|ref|ZP_07399042.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372482|gb|EFM26069.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 234
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 9 ILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ R LL + + E KL+ + + L+W+ +NL + + E+ ++H D L +F
Sbjct: 1 MTRLEELLKEFEIEFDSEKNNKLQKYKEILLEWNSFMNLTAITDDEEIDVKHFLDCLTIF 60
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+L S+ ID+G+G GFPGI +I+ +E V L++S NK+ FL VV++T
Sbjct: 61 KTGELDGKKSV-IDVGTGAGFPGIPMAIKNPDLE---VTLLDSLNKRIKFLNKVVEETDL 116
Query: 124 RG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + R +E + DV +RA+A++ TL EY+ P++
Sbjct: 117 KNVTTYHGRAEEFARKKEFRDAFDVSVSRAVANMATLTEYTLPYV 161
>gi|325291445|ref|YP_004267626.1| Ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
gi|324966846|gb|ADY57625.1| Ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
Length = 251
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 19/149 (12%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIW--------IDLG 79
F L L W++++NL + + +D ++H DSL + + I DLG
Sbjct: 32 FGELLLDWNERMNLTAITEPKDVVVKHFLDSLISIPIIRDMEKNEKIMGSGKELMLADLG 91
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA--- 135
+GGGFPGI I LS + + L++S K+ FL+ V+++ R R ++A
Sbjct: 92 TGGGFPGIPLKIALSHLN---ITLMDSLLKRLGFLQTVIKELGLRKISTHHARAEDAGHD 148
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P D+++ARALADL LLEY+ P L
Sbjct: 149 PAFRQQFDIVTARALADLPVLLEYTVPLL 177
>gi|295101871|emb|CBK99416.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
L2-6]
Length = 235
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 17 NTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPS 73
+T+N++ L++L+ F + +++++K+NL + + E +H DSL +F P
Sbjct: 12 STWNIALTGTQLDRLDAFAEILVEYNQKVNLTAITDPEGIEDKHFLDSL-LFASQPEVAG 70
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RI 132
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA R
Sbjct: 71 KMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVEFLKYACGQLGLTGVEFAKERA 127
Query: 133 QEAPQMI--TTCDVISARALADLDTLLEYSFPWL 164
+EA + D+ SARA+A L L EY P +
Sbjct: 128 EEAARKAWREQFDLASARAVAALPVLAEYCLPLV 161
>gi|254460472|ref|ZP_05073888.1| methyltransferase GidB [Rhodobacterales bacterium HTCC2083]
gi|206677061|gb|EDZ41548.1| methyltransferase GidB [Rhodobacteraceae bacterium HTCC2083]
Length = 151
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+DLGSGGGFPG++ +I + L+ES +K +FLR V ++T A+ V A RI+
Sbjct: 12 WVDLGSGGGFPGLVLAIISKELAPQTQFTLVESDQRKCAFLRTVARETGAKITVIAQRIE 71
Query: 134 EA-PQMITTCDVISARALADLDTLLEYS 160
PQ D++SARAL+DL LL+Y+
Sbjct: 72 GVDPQ---NADILSARALSDLPMLLQYA 96
>gi|218134366|ref|ZP_03463170.1| hypothetical protein BACPEC_02260 [Bacteroides pectinophilus ATCC
43243]
gi|217989751|gb|EEC55762.1| hypothetical protein BACPEC_02260 [Bacteroides pectinophilus ATCC
43243]
Length = 248
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 25/169 (14%)
Query: 16 LNTYNVSRETL--EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHP 70
LN NV + E L+ +Y L ++W+K +NL + + +D +++H DSL VF
Sbjct: 11 LNEINVELDDSMEEALQKYYELLVEWNKVMNLTAITEKDDVYVKHFLDSLAVKTVFDDKE 70
Query: 71 YPSIW---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
Y + ID+G+G GFPGI I S++ V L++S NK+ FL V+
Sbjct: 71 YAKMLPDTNTAIKVIDIGTGAGFPGIPLKIAFPSVK---VTLLDSLNKRIKFLNEVISTV 127
Query: 122 ------AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A G+ A P + D+ +RA+A L TL EY P++
Sbjct: 128 GLNDIEAIHGR--AEDYAREPDYRESYDLCVSRAVATLSTLAEYCLPYV 174
>gi|294010014|ref|YP_003543474.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Sphingobium japonicum UT26S]
gi|292673344|dbj|BAI94862.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Sphingobium japonicum UT26S]
Length = 213
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPY 71
+L ++V R T ++LE + + L + NL++ ST W RH+ DS ++ L +
Sbjct: 9 WLQTRFDVPRGTWDRLERYVAVILDEMGRQNLIAESTRPHIWARHIVDSAQLIPLADNAG 68
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFAC 130
WIDLGSG G PGI+ +I V ++ES+ K+ FL V+ + VF
Sbjct: 69 DGKWIDLGSGAGLPGIVVAILTRR----PVEMVESRRKRIDFLNDVIAELGLPNAAVFGG 124
Query: 131 RIQEAP 136
R++ P
Sbjct: 125 RVESVP 130
>gi|117927028|ref|YP_867645.1| methyltransferase GidB [Magnetococcus sp. MC-1]
gi|189045857|sp|A0LE46|RSMG_MAGSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117610784|gb|ABK46239.1| 16S rRNA m(7)G-527 methyltransferase [Magnetococcus sp. MC-1]
Length = 219
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 17/146 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
EKL F L W+KKINL+ ST + W RH+ +SL + PY S +D+G+G G
Sbjct: 30 EKLAEFVSELLLWNKKINLIGKSTEKSIWSRHIAESLILL---PYVQGSTVLDMGTGAGL 86
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-----APQM 138
PG+ +Q+ S ++L+E KK SFL++V + +++ + E AP
Sbjct: 87 PGL--PLQIVSGSNIEMHLVEKDQKKVSFLKHVSANLNLKNIRIYNKQFTEKGFDGAP-- 142
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+V+++RALA+++ L+ ++ P L
Sbjct: 143 --LVNVVTSRALAEINQLVAWADPCL 166
>gi|291520337|emb|CBK75558.1| 16S rRNA m(7)G-527 methyltransferase [Butyrivibrio fibrisolvens
16/4]
Length = 226
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 13 NYLLNT-----YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+YL+NT + + + + +L+ FY L ++ +K +NL + + ++ I+H DSL +
Sbjct: 6 SYLINTLSSWNFALIEKQISQLDLFYELLVEKNKVMNLTAITEFDEVIIKHFADSLSICT 65
Query: 68 LHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ P + DLG+G GFPGI +I S++ LI+S NK+ FL+ VV
Sbjct: 66 VLPDSVKTVCDLGTGAGFPGIPMAIAFPSLQ---FTLIDSLNKRIKFLQEVVDALGLNNV 122
Query: 126 KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
+ R +EA + D++ +RA+A++ TL EY P +
Sbjct: 123 TLIHARAEEAGRNKLYRENFDLVVSRAVANISTLSEYCLPLV 164
>gi|313112544|ref|ZP_07798209.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625144|gb|EFQ08434.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 235
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 17 NTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPS 73
+T+N++ L++L+ F + + +++K+NL + + E +H DSL +F P
Sbjct: 12 STWNITLTGTQLDQLDAFAEILVDYNQKVNLTAITDPEGIEDKHFLDSL-LFASQPEVAG 70
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RI 132
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA R
Sbjct: 71 RMVDVGAGAGFPGIVTKIYKPELE---LTLMEPTGKRVEFLKYACAQLGLTGVEFAKERA 127
Query: 133 QEAPQMI--TTCDVISARALADLDTLLEYSFPWL 164
+EA + D+ SARA+A L L EY P +
Sbjct: 128 EEAARKAWREQFDLASARAVAALPMLAEYCLPLV 161
>gi|320530365|ref|ZP_08031427.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
gi|320137377|gb|EFW29297.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
Length = 244
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGG 83
LE+ + L L W++++NL + + ED ++H+ DSL + + + ID+G+G G
Sbjct: 25 LEQCVRYNELLLTWNERMNLTALTAPEDVAVKHIVDSLSAYDVPLFARAKSLIDVGTGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMIT-- 140
PGI +I IE V L+++ K+ FL V+++ + V R + A +M T
Sbjct: 85 LPGIPLAIYAPEIE---VTLMDALQKRVRFLTEVIEQLGLKNVVCVHARAEAAARMHTYR 141
Query: 141 -TCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A L L EY+ P++
Sbjct: 142 AQYDIAVSRAVARLPVLAEYALPFV 166
>gi|292669231|ref|ZP_06602657.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
gi|292649072|gb|EFF67044.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
Length = 240
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLGSGGG 83
+E+ + L + W++++NL + + ED ++H+ DSL + +L ID+G+G G
Sbjct: 24 IEQCAVYNRLLIAWNERMNLTALTAPEDVAVKHIIDSLTAYDAKLFAPARTLIDVGTGAG 83
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMI 139
PGI ++ IE V L+++ K+ FL R + R +EA P+
Sbjct: 84 LPGIPLAVYAPKIE---VTLMDALGKRVKFLTEAAAAMELRNVRCIHARAEEAARRPEHR 140
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A L LLEY+ P++
Sbjct: 141 ARYDIAVSRAVARLPVLLEYTLPFV 165
>gi|256545942|ref|ZP_05473297.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
gi|256398364|gb|EEU11986.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
Length = 209
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K + + + ++ +KK NL S ++ I+H EDSL + +D+GSG GFP
Sbjct: 1 MDKFKIYEQMLIETNKKFNLTSIDDPKEIRIKHFEDSLTIKSYINKGMKVLDIGSGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE-APQMITTCD 143
GI I+ + LI+S NKK +F+ V+++ + K R ++ A D
Sbjct: 61 GIPLRIETDFD----LTLIDSVNKKVNFMNEVIEELKLEKAKAIHIRAEDYAKDHREEFD 116
Query: 144 VISARALADLDTLLEYSFPWL 164
++ +RA+A+L TL EY+ P+L
Sbjct: 117 MVISRAVANLSTLSEYALPFL 137
>gi|150019905|ref|YP_001312159.1| 16S rRNA methyltransferase GidB [Clostridium beijerinckii NCIMB
8052]
gi|189039494|sp|A6M3M3|RSMG_CLOB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149906370|gb|ABR37203.1| methyltransferase GidB [Clostridium beijerinckii NCIMB 8052]
Length = 239
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S+E EK + L +W++KINL + E+ +H DS++ F+ + S ID+
Sbjct: 18 LSKEQYEKFIDYMKLLQEWNEKINLTAIIDDEEIIKKHFIDSIKAFKRDEFKIASSLIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+G GFPG+ +I + + V L++S NK+ SFL V+ + A R ++ +
Sbjct: 78 GTGAGFPGLPIAIMRADLN---VTLLDSLNKRVSFLNTVINRIGASNVTTIHSRAEDGAK 134
Query: 138 MIT---TCDVISARALADLDTLLEYSFPWL 164
I D+ ++RA+A++ L E P++
Sbjct: 135 DIKLRENFDIATSRAVANMSVLSELCLPYV 164
>gi|309390343|gb|ADO78223.1| 16S rRNA m(7)G-527 methyltransferase [Halanaerobium praevalens DSM
2228]
Length = 243
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLG 79
S+E LE+L +Y F+ +KK NL + + E +H DSL + + + W+D+G
Sbjct: 24 SQEQLEQLWEYYLFFISENKKYNLSTITEPEAVITKHFLDSLVILKELDFAQHKRWLDIG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ- 137
+G GFPG++ + L G L++S +KK +FL ++ K G + R ++ Q
Sbjct: 84 TGAGFPGMVLKLFLP---GDSFYLLDSASKKVNFLNQLIYKLDLTGIEATHARAEDLAQL 140
Query: 138 --MITTCDVISARALADLDTLLEYSFPWL 164
+ + D + +RA+A L+ LLEY P+L
Sbjct: 141 EDLRASFDYVCSRAVAALNVLLEYVVPFL 169
>gi|167462790|ref|ZP_02327879.1| glucose-inhibited division protein B [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381366|ref|ZP_08055369.1| 16S rRNA methyltransferase GidB-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154942|gb|EFX47213.1| 16S rRNA methyltransferase GidB-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 242
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWID 77
+VS + L++ EY+Y ++W++K+NL + + E +++H DSL + F+ D
Sbjct: 18 SVSDQQLQQFEYYYQELVEWNEKMNLTAITGREQVYVKHFYDSLSLSFFKDMNKVERMAD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSG GFPGI I ++ + +++S NK+ FLR ++ K + + R ++A
Sbjct: 78 IGSGAGFPGIPLKIMFPHLQ---LTIVDSLNKRILFLRQLIDKLGLKEVECVHSRAEDAG 134
Query: 137 QMIT---TCDVISARALADLDTLLEYSFPW 163
++ + D+++ARA+A L L E P+
Sbjct: 135 RLESHRDRYDLVTARAVARLAVLNELCLPF 164
>gi|332971195|gb|EGK10158.1| glucose inhibited division protein B [Desmospora sp. 8437]
Length = 242
Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSG 81
E L+ +Y L ++ +KK+NL + + ++ +++H DSL + + + ID+G+G
Sbjct: 22 EQLDLFYRYYHLLVEGNKKMNLTAITDEKEVFVKHFFDSLTLASHLSFAEVDSLIDVGTG 81
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQ 137
GFPGI I + + L++S NK+ +F++ V + RG + R +EA P
Sbjct: 82 AGFPGIPLKIAYPHLR---LVLLDSLNKRVTFMKESVAELGLRGVECVHGRAEEAARKPM 138
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ DV +ARA+A L+ L EY P++
Sbjct: 139 FRESFDVATARAVARLNVLAEYCLPFV 165
>gi|295398148|ref|ZP_06808197.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
gi|294973667|gb|EFG49445.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
Length = 238
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
++ + + + ++ L ++W++KINL + + +E+ +++H DSL V ++ +D
Sbjct: 17 LNDQQMAQFNRYFELLVEWNEKINLTAITALEEVYLKHFYDSLTVAMHVEMADQEYRLVD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ--- 133
+GSG GFP I I L +++ + +++S NK+ +F+ VV + G + R +
Sbjct: 77 VGSGAGFPSIPLKIALPNLD---ITIVDSLNKRINFINEVVNELGLEGVHAYHDRAEIFG 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ PQ D +ARA+A L+ L E+ P +
Sbjct: 134 QNPQFRDQFDFATARAVARLNLLAEFCLPLV 164
>gi|225570318|ref|ZP_03779343.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
gi|225160850|gb|EEG73469.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
Length = 237
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGF 84
E+ E FY L ++W+K +NL + E+ +H DSL + + I ID+G+G GF
Sbjct: 22 EQFEQFYDLLIEWNKVMNLTGITEYEEVVEKHFVDSLSLVKAIEIDKIHSVIDIGTGAGF 81
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAP 136
PGI I + + L++S NK+ FL V+++T R + +A + +E
Sbjct: 82 PGIPLKIAFPHLN---ITLLDSLNKRIRFLDTVIERTGLKDIRTIHGRAEDYA-KQKEYR 137
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
+M C +RA+A+L TL EY P++
Sbjct: 138 EMYDLC---VSRAVANLATLSEYCIPYI 162
>gi|317123170|ref|YP_004103173.1| methyltransferase GidB [Thermaerobacter marianensis DSM 12885]
gi|315593150|gb|ADU52446.1| methyltransferase GidB [Thermaerobacter marianensis DSM 12885]
Length = 250
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PYPSIWID 77
V + + + + + + NL ++ + H DSL + P + +D
Sbjct: 21 VDGPAVSAMRVHWEMVREAGARFNLTGIDRDDEALVLHYLDSLLALSVPGGWPAEGLLVD 80
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT--AARGKVFACRIQEA 135
LGSG GFPGI + L GL L+E++ KKA+FL VQ+ A R V A R +E
Sbjct: 81 LGSGAGFPGIPLLVALGRGWRGL--LLEAQQKKAAFLADAVQRLGLAERVTVAARRAEEV 138
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
PQ D ++ARALA LD +LEY P L
Sbjct: 139 GRDPQWRGQADAVTARALAPLDVVLEYGLPLL 170
>gi|163847861|ref|YP_001635905.1| 16S rRNA methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
gi|189039492|sp|A9WGI4|RSMG_CHLAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163669150|gb|ABY35516.1| methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
Length = 238
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGG 82
L + E + + W+++ NL + RH+ DSL RV++ P ID+GSG
Sbjct: 25 LAQFERYLDELMTWNERFNLTAVRDRAAMVRRHLLDSLWLARVWET--PPDSLIDIGSGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITT 141
GFP + I ++ V L+E+ KKA+FLR+V+ +V RI+ Q T
Sbjct: 83 GFPALPLKILYPALP---VTLVEATGKKATFLRHVIDCLQLHNIRVLNERIETVGQNPTE 139
Query: 142 CD---VISARALADLDTLLEYSFPWL 164
+ V++ARA+A+L LLEY+ P L
Sbjct: 140 REHYQVVTARAVAELRVLLEYALPLL 165
>gi|308071637|ref|YP_003873242.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus polymyxa E681]
gi|305860916|gb|ADM72704.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Paenibacillus polymyxa E681]
Length = 240
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
++ LE+ E +Y + ++W++K+NL + + + +H DSL + P + D+
Sbjct: 19 INDSQLEQFETYYRVLVEWNEKMNLTGITERDAVYTKHFYDSLSLAFYVPLNDVGSLADI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--- 134
GSG GFPGI I I+ + +++S NK+ FL +VV++ ++ R +E
Sbjct: 79 GSGAGFPGIPLKICFPQIQ---LTIVDSLNKRIQFLAHVVEQLGLENVELIHSRAEELGR 135
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + D+++ARA+A L L E+ P++ +
Sbjct: 136 KPGYRDSYDLVTARAVARLAVLNEFCLPFVRE 167
>gi|222525733|ref|YP_002570204.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
gi|222449612|gb|ACM53878.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
Length = 442
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGG 82
L + E + + W+++ NL + RH+ DSL RV++ P ID+GSG
Sbjct: 229 LAQFERYLDELMTWNERFNLTAVRDRAAMVRRHLLDSLWLARVWET--PPDSLIDIGSGA 286
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITT 141
GFP + I ++ V L+E+ KKA+FLR+V+ +V RI+ Q T
Sbjct: 287 GFPALPLKILYPALP---VTLVEATGKKATFLRHVIDCLQLHNIRVLNERIETVGQNPTE 343
Query: 142 CD---VISARALADLDTLLEYSFPWL 164
+ V++ARA+A+L LLEY+ P L
Sbjct: 344 REHYQVVTARAVAELRVLLEYALPLL 369
>gi|293374960|ref|ZP_06621256.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325844326|ref|ZP_08168102.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
gi|292646437|gb|EFF64451.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325489193|gb|EGC91575.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
Length = 237
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 80/141 (56%), Gaps = 10/141 (7%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIWIDLGSGGG 83
+L ++ L ++W++K+NL + V + +++H DSL F +H S+ D+GSG G
Sbjct: 24 QLHRYFELLVEWNEKMNLTGITEVNEVYLKHFYDSLLAFLMFKDIHKCESL-CDVGSGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITT 141
FP + I ++ ++L++S K+ +FL +V+ +T + K + R +E A + +
Sbjct: 83 FPALPVKIVYPHLK---MDLVDSLGKRVNFLNHVIAETKLQNIKAYHSRAEEYADKHRES 139
Query: 142 CDVISARALADLDTLLEYSFP 162
D+++ARA+A L+ L E P
Sbjct: 140 FDIVTARAVARLNVLSELCVP 160
>gi|313671979|ref|YP_004050090.1| methyltransferase gidb [Calditerrivibrio nitroreducens DSM 19672]
gi|312938735|gb|ADR17927.1| methyltransferase GidB [Calditerrivibrio nitroreducens DSM 19672]
Length = 198
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIW 75
N +V+ EKL +FY+L L + NL S E F+I+H DS+ F+ H P +
Sbjct: 4 NYISVTDLQAEKLAHFYYLHLNAT--FNLTSIKDREQFYIKHFLDSIYFFKNHTPSFNTL 61
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+GSGGGFPG++ +I E + L ES KKA FL++ + + + V RI+E
Sbjct: 62 CDIGSGGGFPGVVIAIFYPDAE---IFLCESIKKKAEFLKFAAHELSLKNIVVLNSRIEE 118
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
D +AR +A + +L+ S
Sbjct: 119 LKSY--RFDFFTARGVAKVLDILKKS 142
>gi|212697396|ref|ZP_03305524.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325846390|ref|ZP_08169359.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|212675588|gb|EEB35195.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325481574|gb|EGC84614.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 209
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K E + + ++ +KK NL + + I+H EDSL + +D+GSG GFP
Sbjct: 1 MDKFEKYGQMLIETNKKFNLTTIDEPDQIKIKHFEDSLTIKSYINEGMKVLDIGSGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCD 143
GI I+ + LI+S NKK +F+ V+++ + + R ++ A + D
Sbjct: 61 GIPLRIEKDFD----LTLIDSVNKKVNFMNQVIEELDLKNTRAIHVRAEDFAKEHREEFD 116
Query: 144 VISARALADLDTLLEYSFPWL 164
++ +RA+A+L TL EY+ P+L
Sbjct: 117 MVISRAVANLSTLSEYALPFL 137
>gi|150392471|ref|YP_001322520.1| methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
gi|166989741|sp|A6TXE3|RSMG_ALKMQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149952333|gb|ABR50861.1| methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
Length = 239
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+S IL+ +++ +++L + + L+W++K+NL + + E+ ++H DSL
Sbjct: 2 ESKMILKDGCQELGFHIDDNQVQQLLTYKDILLEWNEKMNLTAITEEEEVMVKHFLDSLS 61
Query: 65 VFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
Q ID+G+G GFPGI + ++ + L++S NK+ FL+ V Q+
Sbjct: 62 CIQSQYLKEEGTMIDVGTGAGFPGIPLKVYFPKLK---LTLLDSLNKRVEFLKEVSQELG 118
Query: 123 ------ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
G+ C +E + D ARA+A L+ L+EY P++
Sbjct: 119 LEDVNFVHGRAEECGQEETHR--EQYDYAVARAVASLNVLVEYCLPFV 164
>gi|197302260|ref|ZP_03167319.1| hypothetical protein RUMLAC_00987 [Ruminococcus lactaris ATCC
29176]
gi|197298691|gb|EDY33232.1| hypothetical protein RUMLAC_00987 [Ruminococcus lactaris ATCC
29176]
Length = 247
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 21/150 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGG 83
E+ + +Y L ++W+K +NL + E+ ++H DSL RV +H S+ ID+G+G G
Sbjct: 31 EQFDQYYELLVEWNKVMNLTGITEYEEVNLKHFTDSLSIARVKDMHQVQSV-IDIGTGAG 89
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEA 135
FPGI I +E V L++S NK+ FL V++ R + FA +
Sbjct: 90 FPGIPLKIVYPELE---VVLLDSLNKRIKFLDEVIRTLGLEKIRTIHGRAEDFAKK---- 142
Query: 136 PQMITTC-DVISARALADLDTLLEYSFPWL 164
+ C D+ +RA+A+L TL EY P++
Sbjct: 143 -KEYRECFDLCVSRAVANLATLSEYCLPFV 171
>gi|225620215|ref|YP_002721472.1| glucose-inhibited division protein B [Brachyspira hyodysenteriae
WA1]
gi|254766883|sp|C0R0Y0|RSMG_BRAHW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225215034|gb|ACN83768.1| glucose-inhibited division protein B [Brachyspira hyodysenteriae
WA1]
Length = 204
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIW 75
N + EKL + L + ++K +N+ + T EDF+ H+ D L + + Y +I
Sbjct: 12 NIIKIDENKKEKLIQYASLVIDYNKNVNITGAKTEEDFFNDHIADCLLALDIFYDYDNI- 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+GSG G P I +I + + L ESKNKKA FLR K C A
Sbjct: 71 IDIGSGSGLPSIPLAIIFNDKK---FTLCESKNKKAEFLRLAKDKLGLDNIEVKC--INA 125
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
++ D I++RA +D+ TLL+ F L KK
Sbjct: 126 YEIKEKYDTITSRAFSDISTLLKI-FNKLKTKK 157
>gi|320162408|ref|YP_004175633.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
gi|319996262|dbj|BAJ65033.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
Length = 246
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIWI 76
+S +E L + L+W++++NL + V ++H DS ++ +P P+ I
Sbjct: 19 TLSARQVEALRIYEQELLEWNERMNLTAIRDVPGIRVKHFLDSFSCALAWRDNP-PASLI 77
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE- 134
D+G+G GFPGI I S+ + L++S KK F R+VVQK R + R +E
Sbjct: 78 DIGTGAGFPGIPLKILYPSMR---LTLVDSVGKKVDFCRHVVQKLGLDRVEALQARAEEL 134
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWL 164
PQ D ARA+A ++ L EY P +
Sbjct: 135 GQNPQYREKYDCAVARAVAQMNILAEYLLPLV 166
>gi|47459402|ref|YP_016264.1| glucose-inhibited division protein B [Mycoplasma mobile 163K]
gi|55976418|sp|Q6KH77|RSMG_MYCMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|47458732|gb|AAT28053.1| glucose inhibited division protein b [Mycoplasma mobile 163K]
Length = 225
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 14/144 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-------LHPYPSI-W 75
E KLE F L +W+KKINL E+ W + +S F+ L+ + + W
Sbjct: 34 EKFNKLEQFVSLVEEWNKKINLTGFEG-ENLWKEGINESFFCFEKILETKNLNDFENKSW 92
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFP I +I I +IES +K+ FL V +K + K+F R +
Sbjct: 93 VDIGSGAGFPIIPFAIIYPKIN---FYIIESNSKRVRFLELVNEKLNLKIKIFNTRAENF 149
Query: 136 PQMITTCDVISARALADLDTLLEY 159
++ D +SARA+A LD L++Y
Sbjct: 150 SEL--KFDFVSARAVAHLDLLIKY 171
>gi|77920730|ref|YP_358545.1| methyltransferase GidB [Pelobacter carbinolicus DSM 2380]
gi|123573043|sp|Q39ZT2|RSMG_PELCD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77546813|gb|ABA90375.1| 16S rRNA m(7)G-527 methyltransferase [Pelobacter carbinolicus DSM
2380]
Length = 217
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 11 RANYLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R LL +S E ++L ++ L+W+++INL + E+ +H+ DSL V L
Sbjct: 4 RLQELLTRIGLSLEKPVCDRLLWYLDEMLRWNRRINLTAIENKEEALEKHLLDSLTVVPL 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+D+GSG G P I I + V ++S +KK F ++V ++ +G +
Sbjct: 64 LRGDERLLDMGSGAGLPSIPIKIARPQM---CVLSVDSVHKKIVFQQHVARQLKLQGFEA 120
Query: 128 FACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQK 167
ACRIQ Q T+ DV++ARAL L LL + P L K
Sbjct: 121 RACRIQSLSQGESETSFDVVTARALTHLSDLLSMAEPLLNDK 162
>gi|160932437|ref|ZP_02079827.1| hypothetical protein CLOLEP_01272 [Clostridium leptum DSM 753]
gi|156868396|gb|EDO61768.1| hypothetical protein CLOLEP_01272 [Clostridium leptum DSM 753]
Length = 236
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
YC+ +L +S E L++ + + L L+W+KK+NL + E+ I+H DS
Sbjct: 10 YCEGFGVL----------LSPEQLDQFDGYCRLLLEWNKKMNLTAIREPEEVLIKHFVDS 59
Query: 63 LRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + F P + ID+G+G GFPG+ I + + L++S K+ +FL+ V
Sbjct: 60 LALLGFAELPQGAKLIDVGTGAGFPGLPLKIARPDLR---LALLDSLKKRLTFLQAVCGT 116
Query: 121 TAARGKVFACRIQEAPQMI---TTCDVISARALADLDTLLEYSFPWL 164
+ R ++ ++ D +RA+A L+ L EY P++
Sbjct: 117 LGLDADIIHSRAEDGGKLSGLRQNFDAAVSRAVAPLNLLAEYCLPFV 163
>gi|167044776|gb|ABZ09445.1| putative glucose inhibited division protein [uncultured marine
microorganism HF4000_APKG8C21]
Length = 304
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L+A ++S +E+ +Y W+ ++NL S + ED H DSL V
Sbjct: 70 LLKAGTAALGIHLSLAQIERFRAYYQEIANWNTRVNLTSVTRWEDVQTTHFVDSLTVSLA 129
Query: 69 HPYP---SIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV------- 117
P S WI D+GSG GFPGI I + G V LIES KK +FL ++
Sbjct: 130 IPRAVLESGWIVDVGSGAGFPGIPLKI---AFPGARVTLIESTGKKTAFLSHLTHALGLE 186
Query: 118 -VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
V R + A P++ + D + +RA+A + L+E + P+
Sbjct: 187 DVDVRTGRAEALA----HDPELRESFDCVVSRAVAGMAALVELTLPF 229
>gi|302390789|ref|YP_003826610.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
gi|302201417|gb|ADL08987.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
Length = 250
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWID 77
+ E + L F ++W+K+INL + E F ++H+ DSL + + + S +D
Sbjct: 19 EIDPEKAKLLGIFKDEIVEWNKRINLTAIVDEEQFIVKHIIDSLIILKKIDFHSGAKLVD 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAP 136
+G+G GFPG+ I + +V L++S KK FL++ V+K R V R +EA
Sbjct: 79 VGTGAGFPGVPVKIMRQDL---VVLLMDSSRKKTEFLKHAVKKLGLQRTDVLCARAEEAA 135
Query: 137 QM---ITTCDVISARALADLDTLLEYSFPWL 164
+ D ARA++ L+TL+E P +
Sbjct: 136 KSGGYREMYDAAVARAVSGLNTLVELCLPLV 166
>gi|146328718|ref|YP_001210034.1| glucose inhibited division protein GidB [Dichelobacter nodosus
VCS1703A]
gi|189039384|sp|A5EXK3|RSMG_DICNV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146232188|gb|ABQ13166.1| glucose inhibited division protein GidB [Dichelobacter nodosus
VCS1703A]
Length = 211
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ V++E +EKL ++ L KW++ NL + + I H+ DSL V P D
Sbjct: 20 SFPVNQEVIEKLMHYLQLLAKWNRVHNLTAIREPQQQVIVHLLDSLVVAPFLPPAQTIAD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-A 135
+GSG G PGI+ +I + LV ES KK+ FLR V++ A KV A R ++
Sbjct: 80 IGSGAGLPGIVLAIVCPQQQFFLV---ESNTKKSVFLREAVRQLALENVKVVAMRAEQWR 136
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
P+ +V+ +RA++D+++ L ++
Sbjct: 137 PE--AKLNVLISRAVSDINSFLMWT 159
>gi|240256423|ref|NP_568720.4| unknown protein [Arabidopsis thaliana]
gi|332008514|gb|AED95897.1| glucose inhibited division protein B [Arabidopsis thaliana]
Length = 292
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 22/155 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-------FQLHP---YPSI-W 75
+++ + L+W++K+NL ++ ++ RH+EDSL + + LH + I
Sbjct: 69 DQIHLYVDTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDLFDHINL 128
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVFA 129
ID+GSG G PG++ +I V L+ES NK+ FL +VV T RG+ +
Sbjct: 129 IDVGSGAGLPGLVLAIACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAES 185
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
C DV ARA+A++ L EY P +
Sbjct: 186 C--GHDVMYREKFDVAIARAVAEMRVLAEYCLPLV 218
>gi|148907902|gb|ABR17072.1| unknown [Picea sitchensis]
Length = 301
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 21/166 (12%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------ 68
LL+T ++ ++ E+ F L+W++++NL + + RHVEDSL + +
Sbjct: 67 LLDTLSMKQQ--EQTSLFVNTLLEWNQRMNLTAVTEHCAVMERHVEDSLALLPIIENAYK 124
Query: 69 HPYPSI------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P++ +D+GSG G PGII +I + + LIES K+ FL +VV +
Sbjct: 125 NNCPTMESVRLNLVDVGSGAGLPGIILAIARPDWQ---ITLIESLQKRCFFLEHVVDVSG 181
Query: 123 -ARGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
+ +V R ++A P D+ ARA+AD+ L EY P +
Sbjct: 182 LSNAQVVRIRAEDAGQNPDFREKYDIAVARAVADMRILAEYCLPLV 227
>gi|322391720|ref|ZP_08065187.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
gi|321145430|gb|EFX40824.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
Length = 237
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 15 LLNTYNVSRETLEKL--EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHP 70
LL N+S +K+ E+++ L ++W++KINL + + E+ +++H DS+ + Q L P
Sbjct: 9 LLAEQNLSLTEQQKMQFEHYFQLLVEWNEKINLTAITDKEEVYLKHFYDSVAPILQGLIP 68
Query: 71 YPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+I +D+G+G GFP I I ++E V +I+S NK+ +FL+ + + G F
Sbjct: 69 NETIKLLDIGAGAGFPSIPMKILYPNLE---VTIIDSLNKRINFLQLLAGELGLEGVHFY 125
Query: 129 ---ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + D+++ARA+A + L E + P+L
Sbjct: 126 HGRAEDFAQDKNFRAQFDIVTARAVARMQVLSELTIPFL 164
>gi|10177222|dbj|BAB10297.1| unnamed protein product [Arabidopsis thaliana]
Length = 329
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 22/153 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-------FQLHP---YPSI-W 75
+++ + L+W++K+NL ++ ++ RH+EDSL + + LH + I
Sbjct: 69 DQIHLYVDTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDLFDHINL 128
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVFA 129
ID+GSG G PG++ +I V L+ES NK+ FL +VV T RG+ +
Sbjct: 129 IDVGSGAGLPGLVLAIACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAES 185
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
C DV ARA+A++ L EY P
Sbjct: 186 C--GHDVMYREKFDVAIARAVAEMRVLAEYCLP 216
>gi|322373911|ref|ZP_08048446.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
gi|321277283|gb|EFX54353.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
Length = 237
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSI--W 75
+N+S++ ++ + ++ L ++W++KINL + + D +++H DSL V Q H
Sbjct: 15 FNLSQQQKDQFQRYFELLVEWNEKINLTAITDKNDVYLKHFYDSLAPVLQGHIKNQDIRL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
+D+G+G GFP + I +E V +I+S NK+ +FL + + G F A
Sbjct: 75 LDIGAGAGFPSLPMKILCPKLE---VTIIDSLNKRINFLNLLADELQLSGVHFYHGRAED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ DV++ARA+A L L E + P+L
Sbjct: 132 FGQDKSFRAQFDVVTARAVARLQILSELTIPFL 164
>gi|186685535|ref|YP_001868731.1| 16S rRNA methyltransferase GidB [Nostoc punctiforme PCC 73102]
gi|238689423|sp|B2J5Q6|RSMG_NOSP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|186467987|gb|ACC83788.1| methyltransferase GidB [Nostoc punctiforme PCC 73102]
Length = 244
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF------QLHPYPSIWIDLGS 80
E+ + Y L L+ ++++NL + ++FW +H+ DSLR L P ID+G+
Sbjct: 26 EQFQRLYELILEGNRQLNLTRITDPQEFWEKHLWDSLRGILPLLSGNLPPASPTIIDIGT 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACR---IQEAP 136
G GFPG+ ++ ++ + L++S KK +FL ++ + A K R I + P
Sbjct: 86 GAGFPGVPVAM---TVPNCTITLLDSTQKKITFLDNILTELALTNTKTIVGRAEKIGQHP 142
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D+ RA+ + EY+ P L Q
Sbjct: 143 QHRMAYDIALIRAVGAVSVCAEYTLPLLKQ 172
>gi|254442849|ref|ZP_05056325.1| methyltransferase GidB [Verrucomicrobiae bacterium DG1235]
gi|198257157|gb|EDY81465.1| methyltransferase GidB [Verrucomicrobiae bacterium DG1235]
Length = 212
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 15/151 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWID 77
+S E + +L + L +W+ KINL+S S VE+ RH+ SL +V P ++ ID
Sbjct: 15 LSPEQIAQLAQYAELIAEWNSKINLISRSDVENLPKRHILHSLAIAKVMAFQPDSTV-ID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+GGGFPGI +I L++S KK ++ +++ V F CR++E
Sbjct: 74 VGTGGGFPGIPLAIAFPETR---FLLVDSIGKKIKVVQDCIERLGLTNAVAFNCRVEEVD 130
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D I ARA+ L ++ W+ +K
Sbjct: 131 RQV---DFIVARAVTQLPKFMD----WIRKK 154
>gi|255540789|ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus communis]
gi|223550574|gb|EEF52061.1| Methyltransferase gidB, putative [Ricinus communis]
Length = 282
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSI----W 75
E++ ++ L+W++K+NL + + + RH+EDSL + H SI
Sbjct: 61 EQIRHYVDALLEWNQKMNLTAVTEANEVMRRHIEDSLAMLTPIRKSYISHCSSSIDNLKL 120
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE 134
+D+G+G G PG+I +I + G V L+ES NK+ FL + V T + +V R +
Sbjct: 121 VDVGTGPGLPGLILAI---ACPGWKVTLLESMNKRCVFLEHAVNVTGLSNVEVLRGRAES 177
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWL 164
Q + DV ARA+A++ L EY P +
Sbjct: 178 LGQNDSFREQFDVAVARAVAEMRVLAEYCLPLV 210
>gi|291558324|emb|CBL35441.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum V10Sc8a]
Length = 232
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
+S++ +KL Y ++++K +NL + + E+ ++H DS+ F + S +ID+
Sbjct: 18 LSQDKADKLLKLYEFLVEYNKNVNLTAITDFEEVVVKHFIDSVLPFSMIDIKENSSFIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQ 137
G+G GFP I I ++G L+E+ NK+ FL + T KV R ++ A +
Sbjct: 78 GTGAGFPSIPLMIVRPDLKG---TLLEALNKRCVFLEKACELTEVDAKVIHGRAEDYAKE 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D +ARA+A + L EY P++
Sbjct: 135 KREAFDFATARAVAAMPVLCEYCIPYV 161
>gi|332074619|gb|EGI85093.1| methyltransferase GidB [Streptococcus pneumoniae GA17545]
Length = 254
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|251781805|ref|YP_002996107.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390434|dbj|BAH80893.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323126617|gb|ADX23914.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 237
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
E+ + ++ L ++W+ KINL + + D +++H DS+ + Q L P +D+G+G G
Sbjct: 23 EQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIAPILQGFLANEPIRLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++E V +I+S NK+ +FL ++ + A + F R ++ Q
Sbjct: 83 FPSLPMKILFPNLE---VTIIDSLNKRIAFLTHLAESLALDKVHFFHGRAEDFGQDKDFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
DV++ARA+A + L E + P+L
Sbjct: 140 AQFDVVTARAVARMQVLAELTIPFL 164
>gi|329121704|ref|ZP_08250321.1| glucose inhibited division protein B [Dialister micraerophilus DSM
19965]
gi|327468174|gb|EGF13660.1| glucose inhibited division protein B [Dialister micraerophilus DSM
19965]
Length = 231
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 88/153 (57%), Gaps = 9/153 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+++ET EKL + ++ ++ INL + E+ I++V DSL V++ +P +DL
Sbjct: 12 INKETYEKLISYNKYVIEKNQHINLTGIKSEEESLIKNVYDSLTVYEEKYFPENGKILDL 71
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAP- 136
G+GGGFPG+I +I ++ V L+++ KK ++ +++K + K R ++A
Sbjct: 72 GTGGGFPGVILAILRPDMQ---VVLMDAVRKKLDAIKEILEKLEIKNAKTLHARAEDAAR 128
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D+++ARA+ ++T+ E++ P++ ++
Sbjct: 129 DEKYRDVFDIVTARAVKRMNTVSEWALPFVKKE 161
>gi|121996811|ref|YP_001001598.1| methyltransferase GidB [Halorhodospira halophila SL1]
gi|189045853|sp|A1WSY4|RSMG_HALHL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121588216|gb|ABM60796.1| 16S rRNA m(7)G-527 methyltransferase [Halorhodospira halophila SL1]
Length = 209
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 13/137 (9%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
LE+LE F L ++W++ NL ++ VE RH+ DSL V + P ++ D+GSG GF
Sbjct: 21 ALERLEGFLSLLMRWNRAYNLTAARDVETLIDRHLLDSLVVRRYLPAGALA-DVGSGAGF 79
Query: 85 PGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTC 142
PG++ L+ IE V LI+S KK FLR + R +V R+ + +
Sbjct: 80 PGLV----LALIEPDRSVTLIDSNGKKTRFLRQCATELGLHRVQVRQARM----EALDDG 131
Query: 143 D--VISARALADLDTLL 157
D V++ARA+A L TL+
Sbjct: 132 DFAVVTARAVAPLATLI 148
>gi|288554599|ref|YP_003426534.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
gi|288545759|gb|ADC49642.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
Length = 237
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--ID 77
++S + L++ E ++ + ++W++K+NL + ++ ED +I+H DS+ + + + ID
Sbjct: 16 DLSEKQLQQFERYFNILVEWNEKMNLTALTSEEDVYIKHFYDSISASFFYSFEAGQKIID 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I I V++++S K+ FL ++ + G F A
Sbjct: 76 VGAGAGFPSIPLKILYPEIH---VSIVDSLKKRIGFLEHLASELELDGVAFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ P D+++ARA+A + L E P +
Sbjct: 133 QNPAHREQYDIVTARAVARMSVLAELCLPLV 163
>gi|167770825|ref|ZP_02442878.1| hypothetical protein ANACOL_02178 [Anaerotruncus colihominis DSM
17241]
gi|167666865|gb|EDS10995.1| hypothetical protein ANACOL_02178 [Anaerotruncus colihominis DSM
17241]
Length = 237
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGG 83
L+ + + L ++W+ K+NL + + ++ I+H DSL + L P P + +D+G+G G
Sbjct: 23 LDAFDRYAALLVEWNAKMNLTAITEPQEIVIKHFVDSLSLLSLCPIPQGARLVDVGTGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA---PQMIT 140
FP + I + + L++S NK+ +FL+ + Q + R +EA P
Sbjct: 83 FPSVPLKIARPDLH---LTLLDSLNKRITFLQELSQSLGQDNECIHARAEEAGRSPVYRE 139
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A L L EY P++
Sbjct: 140 KYDMAVSRAVARLYELSEYCLPFV 163
>gi|116516833|ref|YP_816609.1| glucose-inhibited division protein B [Streptococcus pneumoniae D39]
gi|148985185|ref|ZP_01818424.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|148989310|ref|ZP_01820690.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|149002659|ref|ZP_01827591.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|149007047|ref|ZP_01830716.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|149012342|ref|ZP_01833411.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|169834139|ref|YP_001694710.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Hungary19A-6]
gi|225856947|ref|YP_002738458.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|237649984|ref|ZP_04524236.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974]
gi|237821110|ref|ZP_04596955.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974M2]
gi|303261605|ref|ZP_07347552.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|303267143|ref|ZP_07353011.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|303268436|ref|ZP_07354231.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|307127124|ref|YP_003879155.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|29336662|sp|Q8DPH3|RSMG_STRR6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122278505|sp|Q04K39|RSMG_STRP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766908|sp|C1CL20|RSMG_STRZP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116077409|gb|ABJ55129.1| methyltransferase GidB [Streptococcus pneumoniae D39]
gi|147759270|gb|EDK66263.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|147761351|gb|EDK68317.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|147763668|gb|EDK70603.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|147922630|gb|EDK73748.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|147925288|gb|EDK76367.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|168996641|gb|ACA37253.1| methyltransferase GidB [Streptococcus pneumoniae Hungary19A-6]
gi|225724396|gb|ACO20248.1| methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|301800198|emb|CBW32806.1| methyltransferase GidB [Streptococcus pneumoniae OXC141]
gi|301802074|emb|CBW34807.1| methyltransferase GidB [Streptococcus pneumoniae INV200]
gi|302637185|gb|EFL67673.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|302642042|gb|EFL72394.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|302643304|gb|EFL73583.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|306484186|gb|ADM91055.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|332074898|gb|EGI85370.1| methyltransferase GidB [Streptococcus pneumoniae GA41301]
Length = 237
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|319936584|ref|ZP_08010998.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
gi|319808382|gb|EFW04942.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
Length = 234
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGF 84
L++ E +Y ++W++K+NL + + ED +++H DSL + F D+G+G GF
Sbjct: 22 LKQFEIYYNTLVEWNEKMNLTAITQKEDVYLKHFYDSLTISFDFDFNNQTLCDIGAGAGF 81
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--------KTAARGKVFACRIQEAP 136
P I I ++ + +++S K+ +FL Y+ Q +AR + +A +E
Sbjct: 82 PSIPLKIVYPDLK---ITIVDSLTKRITFLNYLTQVLKLNNVTAVSARAEDYAIGHRE-- 136
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
T D+++ARA+A L+ L E P +
Sbjct: 137 ----TFDIVTARAVARLNILDELCLPLV 160
>gi|313892198|ref|ZP_07825791.1| 16S rRNA methyltransferase GidB [Dialister microaerophilus UPII
345-E]
gi|313119336|gb|EFR42535.1| 16S rRNA methyltransferase GidB [Dialister microaerophilus UPII
345-E]
Length = 231
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 88/153 (57%), Gaps = 9/153 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+++ET EKL + ++ ++ INL + E+ I++V DSL V++ +P +DL
Sbjct: 12 INKETYEKLISYNKYVIEKNQHINLTGIKSEEESLIKNVYDSLTVYEEKYFPENGKILDL 71
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQ 137
G+GGGFPG+I +I ++ V L+++ KK ++ +++K + K R ++A +
Sbjct: 72 GTGGGFPGVILAILRPDMQ---VVLMDAVRKKLDAIKEILEKLEIKNAKTLHARAEDAAR 128
Query: 138 ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
D+++ARA+ ++T+ E++ P++ ++
Sbjct: 129 DENYRDVFDIVTARAVKRMNTVSEWALPFVKKE 161
>gi|322411150|gb|EFY02058.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 237
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
E+ + ++ L ++W+ KINL + + D +++H DS+ + Q L P +D+G+G G
Sbjct: 23 EQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIAPILQGFLANEPIRLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++E V +I+S NK+ +FL ++ + A + F R ++ Q
Sbjct: 83 FPSLPMKILFPNLE---VTIIDSLNKRIAFLTHLAEALALDKLHFFHGRAEDFGQDKDFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
DV++ARA+A + L E + P+L
Sbjct: 140 AQFDVVTARAVARMQVLAELTIPFL 164
>gi|225016768|ref|ZP_03705960.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
gi|224950436|gb|EEG31645.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
Length = 236
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWID 77
++++ L++ + + L ++W++KINL S + ++ I+H DSL + + P + ID
Sbjct: 17 DITQMQLDQFDLYAKLLVEWNEKINLTSITDPDEIVIKHFVDSLLLLRAANLPQGASLID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-- 134
+G+G GFP S L+ + G L + ++S NK+ FL+ V + K R +E
Sbjct: 77 VGTGAGFP----STPLAILRGDLQITQLDSLNKRILFLQEVSDQLGLPIKTVHIRAEEGG 132
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D +ARA+A+L TL EY P++
Sbjct: 133 KSAEFREKYDYATARAVANLQTLSEYCIPFV 163
>gi|253573865|ref|ZP_04851207.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846342|gb|EES74348.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
Length = 240
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--ID 77
VS E L++ E +Y + W++K+NL + E +I+H DS+ + P I D
Sbjct: 18 EVSEEQLKQFERYYEELVSWNEKMNLTGITEREQVYIKHFYDSISLAFHVPMGEIESKAD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKVFACR 131
+GSG GFPGI I ++ + +++S NK+ FL++VV Q G+
Sbjct: 78 IGSGAGFPGIPLKICFPHLQ---LTIVDSLNKRIQFLQHVVNELGLNQVRLLHGRAEDLG 134
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
QE + D+++ARA+A + L E+ P++
Sbjct: 135 RQE--DLRDAFDLVTARAVARMAILNEFCLPFV 165
>gi|168491204|ref|ZP_02715347.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
gi|183574346|gb|EDT94874.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
Length = 237
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G ++ R ++
Sbjct: 77 IGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHLYHGRAEDFA 133
Query: 137 Q---MITTCDVISARALADLDTLLEYSFPWL 164
Q D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|15903207|ref|NP_358757.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae R6]
gi|182684218|ref|YP_001835965.1| glucose-inhibited division protein B [Streptococcus pneumoniae
CGSP14]
gi|15458795|gb|AAK99967.1| Glucose inhibited division protein B [Streptococcus pneumoniae R6]
gi|182629552|gb|ACB90500.1| glucose-inhibited division protein B [Streptococcus pneumoniae
CGSP14]
Length = 245
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 25 LSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 84
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 85 IGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFA 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 142 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 172
>gi|257899263|ref|ZP_05678916.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|293572710|ref|ZP_06683674.1| methyltransferase GidB [Enterococcus faecium E980]
gi|257837175|gb|EEV62249.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|291607202|gb|EFF36560.1| methyltransferase GidB [Enterococcus faecium E980]
Length = 237
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLH-PYPSIWIDLGSGGG 83
+E+ +Y ++W++K+NL + + +D +++H DSL + F++ P D+GSG G
Sbjct: 22 MEQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAFEVDFTQPLSLCDVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---EAPQMIT 140
FP + I ++ + +++S NK+ +FL + + ++ R + + PQ
Sbjct: 82 FPSVPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDASLYHDRAETFGQNPQFRA 138
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
+ D+++ARA+A L+ L E P Q+
Sbjct: 139 SFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|110803383|ref|YP_699902.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
gi|123145823|sp|Q0SPQ5|RSMG_CLOPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110683884|gb|ABG87254.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
Length = 239
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
+K + L +W++KINL + + E+ +H D ++ F+ + ID+G+G GF
Sbjct: 24 QKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKTVIDVGTGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMIT 140
PG+ +I +E V L++S NK+ +FL VV K A + + R ++ ++
Sbjct: 84 PGLPIAIMREDVE---VTLLDSLNKRINFLNEVVNKLALKNVETIHSRAEDGARKKELRE 140
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ ++RA+A++ L E+ P++
Sbjct: 141 NFDIATSRAVANMCVLSEFCIPYV 164
>gi|317133702|ref|YP_004093016.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
gi|315471681|gb|ADU28285.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
Length = 237
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGG 83
L +L + L ++W++KINL + + ++ ++H DSL + P ++ +D+GSG G
Sbjct: 22 LGQLNQYARLLVEWNEKINLTAITDRQEIAVKHFLDSLSLLHFVPPEQNAVVLDVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEA---PQMI 139
FPG++ I + + ++ K+ FL + + V R +EA P +
Sbjct: 82 FPGMVLRIARPDLR---LTCMDGTQKRIHFLSELAAALGLQEVVCLHARAEEAGRDPALR 138
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
T D ++ARA+A+L L EY P++
Sbjct: 139 ETFDYVTARAVANLHALAEYCLPFV 163
>gi|18311635|ref|NP_563569.1| glucose-inhibited division protein B [Clostridium perfringens str.
13]
gi|110799944|ref|YP_697343.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|168211560|ref|ZP_02637185.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
gi|20177885|sp|Q8XH32|RSMG_CLOPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123049536|sp|Q0TLZ7|RSMG_CLOP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|18146319|dbj|BAB82359.1| glucose-inhibited division protein [Clostridium perfringens str.
13]
gi|110674591|gb|ABG83578.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|170710444|gb|EDT22626.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
Length = 239
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
+K + L +W++KINL + + E+ +H D ++ F+ + ID+G+G GF
Sbjct: 24 QKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKTVIDVGTGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMIT 140
PG+ +I +E V L++S NK+ +FL VV K + K R ++ ++
Sbjct: 84 PGLPIAIMREDVE---VTLLDSLNKRINFLNEVVNKLGLKNVKTIHSRAEDGARKKELRE 140
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ ++RA+A++ L E+ P++
Sbjct: 141 NFDIATSRAVANMCVLSEFCIPYV 164
>gi|332523926|ref|ZP_08400178.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
gi|332315190|gb|EGJ28175.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
Length = 237
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSI 74
Y+++++ ++ ++ ++W++KINL + + D +++H DS+ L Y P
Sbjct: 15 YDLTQKQKDQFNTYFNTLIEWNQKINLTAITEKNDVYLKHFYDSIAPI-LQGYIPNQPIQ 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----AC 130
+D+G+G GFP + I ++ V +I+S NK+ +FL ++ Q+ G F A
Sbjct: 74 LLDIGAGAGFPSLPMKIVFPQLQ---VTIIDSLNKRITFLAHLTQELGLDGVAFYHGRAE 130
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKDFRSKYDLVTARAVARMQILSELTIPFL 164
>gi|300814759|ref|ZP_07095007.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511146|gb|EFK38398.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 231
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWI 76
Y ++ E +E E F L+++K N+ ++F ++H DSL +F+ L +
Sbjct: 10 YKLNNENIEDFEKFRKFLLEYNKITNITRIVDEDEFNVKHYLDSLSIFKTGLIRDNMKIL 69
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE- 134
DLG+GGGFPG+ + ++ ++L++S NK+ FL +++ + K R +E
Sbjct: 70 DLGTGGGFPGVPLKLYKKDLD---ISLVDSLNKRIVFLNKAIEELDLKNIKAIHARAEEL 126
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWL 164
++++RA+A L TLLEY+ P++
Sbjct: 127 AFDKDYREKFQLVTSRAVARLRTLLEYALPFV 158
>gi|304320461|ref|YP_003854104.1| glucose inhibited division protein B [Parvularcula bermudensis
HTCC2503]
gi|303299363|gb|ADM08962.1| glucose inhibited division protein B [Parvularcula bermudensis
HTCC2503]
Length = 215
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPS 73
L++ +++ T + + L+ S NL++ S++ D W RH DSL++ + P + S
Sbjct: 14 LVDAFDLDDATAALIAAYDSHLLEVSAHTNLLARSSLADRWARHYADSLQLARFIPDHAS 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++DLGSG GFPG++ +I + V L +S KKA FL+ + V A R +
Sbjct: 74 SYLDLGSGAGFPGLLLAI-VHRHRPCRVTLCDSVGKKARFLKETAEALGLDITVEARRAE 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+VI+ARA+ LD LL P L
Sbjct: 133 ALAAAGDRFEVITARAVTALDKLLGLCAPLL 163
>gi|51245135|ref|YP_065019.1| glucose inhibited division protein B [Desulfotalea psychrophila
LSv54]
gi|81642450|sp|Q6ANR2|RSMG_DESPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50876172|emb|CAG36012.1| related to glucose inhibited division protein B [Desulfotalea
psychrophila LSv54]
Length = 217
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLK-WSKKINLVSSSTVEDFWIR-HVEDSLRVFQLHPYPSIWID 77
+ R E+L Y YF+ LK WS+K+NL++ T E + H DSL + L P + +D
Sbjct: 19 ELDRPGQERL-YTYFVELKKWSQKVNLIAKGTGEAEIVENHFLDSLALLPLLPEGAGLLD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G PG+I + + L+E + K+ SFLR++V+ G +++ RI++ P
Sbjct: 78 IGTGAGLPGLICKAARPDLR---LFLVEPRAKRVSFLRHIVRTLQLEGVEIYCSRIEDEP 134
Query: 137 QMITTCDV--ISARALADLDTLL 157
++ + D+ I++RA++D+ L
Sbjct: 135 ELFASEDISYITSRAVSDISGFL 157
>gi|298252131|ref|ZP_06975934.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
gi|297546723|gb|EFH80591.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
Length = 247
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 15 LLNTYNVSRETLEKL------EYFYFLF----LKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+L NV +E L++L E + + L+W+ + NL + E+ +H DSL
Sbjct: 10 VLTMTNVFQEGLQRLGLSGELEAAFLRYRQELLEWNTRFNLTAIKDPEEVMTKHFLDSLS 69
Query: 65 VFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ ++P + +D+G+G GFPG+ + V L+E+ NKK +FLR++V
Sbjct: 70 LLAIYPQDEATTLLDIGTGPGFPGLPLKMARPRWR---VTLVEATNKKVTFLRHMVDVLE 126
Query: 123 ARG-KVFACRIQEAPQMI---TTCDVISARALADLDTLLEYSFPW 163
+V R +E Q + D+++ARA+A L LLEY P+
Sbjct: 127 LEHVEVIHGRAEELGQKAAYRSAFDLVTARAVAALPALLEYCAPY 171
>gi|282881764|ref|ZP_06290422.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
gi|281298374|gb|EFA90812.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
Length = 231
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWI 76
Y ++ E +E E F L+++K N+ ++F ++H DSL +F+ L +
Sbjct: 10 YKLNNENIEDFEKFRKFLLEYNKITNITRIVDEDEFNVKHYLDSLSIFKTGLIRDNMKIL 69
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE- 134
DLG+GGGFPG+ + ++ ++L++S NK+ FL +++ + K R +E
Sbjct: 70 DLGTGGGFPGVPLKLYKKDLD---ISLVDSLNKRIVFLNKAIEELDLKNIKAIHARAEEL 126
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWL 164
++++RA+A L TLLEY+ P++
Sbjct: 127 AFDEDYREKFQLVTSRAVARLRTLLEYALPFV 158
>gi|148994096|ref|ZP_01823436.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489112|ref|ZP_02713311.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|168493205|ref|ZP_02717348.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|221231973|ref|YP_002511125.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225854749|ref|YP_002736261.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|254766905|sp|B8ZJU9|RSMG_STRPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766907|sp|C1CEP0|RSMG_STRZJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147927449|gb|EDK78478.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572467|gb|EDT92995.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|183576802|gb|EDT97330.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|220674433|emb|CAR68986.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225723304|gb|ACO19157.1| methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|332073624|gb|EGI84103.1| methyltransferase GidB [Streptococcus pneumoniae GA17570]
gi|332203134|gb|EGJ17202.1| methyltransferase GidB [Streptococcus pneumoniae GA47901]
Length = 237
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|15901145|ref|NP_345749.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae TIGR4]
gi|111658512|ref|ZP_01409178.1| hypothetical protein SpneT_02000339 [Streptococcus pneumoniae
TIGR4]
gi|148998925|ref|ZP_01826360.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149019281|ref|ZP_01834643.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|168484499|ref|ZP_02709451.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|168487454|ref|ZP_02711962.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|168575740|ref|ZP_02721655.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194397570|ref|YP_002037888.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225859081|ref|YP_002740591.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225860884|ref|YP_002742393.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230786|ref|ZP_06964467.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254276|ref|ZP_06977862.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307067934|ref|YP_003876900.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|20177896|sp|Q97QD4|RSMG_STRPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797832|sp|B5E522|RSMG_STRP4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766904|sp|C1C7R5|RSMG_STRP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766909|sp|C1CR21|RSMG_STRZT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14972770|gb|AAK75389.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TIGR4]
gi|147755235|gb|EDK62287.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147931151|gb|EDK82130.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|172042251|gb|EDT50297.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|183569712|gb|EDT90240.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|183578267|gb|EDT98795.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194357237|gb|ACF55685.1| methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225722107|gb|ACO17961.1| methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225726989|gb|ACO22840.1| methyltransferase GidB [Streptococcus pneumoniae Taiwan19F-14]
gi|301794360|emb|CBW36788.1| methyltransferase GidB [Streptococcus pneumoniae INV104]
gi|306409471|gb|ADM84898.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|327389519|gb|EGE87864.1| methyltransferase GidB [Streptococcus pneumoniae GA04375]
gi|332200730|gb|EGJ14802.1| methyltransferase GidB [Streptococcus pneumoniae GA41317]
gi|332201749|gb|EGJ15819.1| methyltransferase GidB [Streptococcus pneumoniae GA47368]
Length = 237
Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|331086946|ref|ZP_08336022.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409607|gb|EGG89046.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 240
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
E+ + FY + ++W++ +NL + E+ +H DS+ + + S+ ID+G+G GF
Sbjct: 23 EQFDLFYEILVEWNEFMNLTGITEYEEVNEKHFVDSVSIVKAMDMKSVKSVIDVGTGAGF 82
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMIT 140
PGI I +E V L++S NK+ FL V++K +G + R ++ +
Sbjct: 83 PGIPLKIVFPELE---VVLLDSLNKRVKFLNAVIEKLQLKGIRAIHGRAEDYAKQQEYRE 139
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A+L TL EY P++
Sbjct: 140 QFDLCVSRAVANLATLSEYCLPYV 163
>gi|291531939|emb|CBK97524.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum 70/3]
Length = 232
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
+S++ +KL Y +++++ +NL + + E+ ++H DS+ F + S +ID+
Sbjct: 18 LSQDKADKLLKLYEFLVEYNQNVNLTAITDFEEVVVKHFIDSVLPFSMIDIKENSSFIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQ 137
G+G GFP I I ++G L+E+ NK+ FL + T KV R ++ A +
Sbjct: 78 GTGAGFPSIPLMIVRPDLKG---TLLEALNKRCVFLEKACELTGVDAKVVHGRAEDYAKE 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D +ARA+A + L EY P++
Sbjct: 135 KREAFDFATARAVAAMPVLCEYCIPYV 161
>gi|94991792|ref|YP_599891.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS2096]
gi|166224618|sp|Q1JDG1|RSMG_STRPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94545300|gb|ABF35347.1| Methyltransferase gidB [Streptococcus pyogenes MGAS2096]
Length = 237
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYP 72
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS L+ F L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQAF-LANEP 71
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 72 IKLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGR 128
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q DV++ARA+A + L E + P+L
Sbjct: 129 AEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFL 164
>gi|258517427|ref|YP_003193649.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
gi|257781132|gb|ACV65026.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
Length = 236
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIIT 89
FY L + ++ NL + + +D +RH DSL + + +ID+G+G GFPGI
Sbjct: 27 FYNLIVLGNQACNLTAITAQQDVVVRHFLDSLSCVKAVSFDGDLRFIDVGTGAGFPGIPL 86
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI---TTCDVI 145
I + V LIES NKK +FL+ V++ V R +EA +I D +
Sbjct: 87 KIMYPRLS---VVLIESINKKVNFLKNTVKELGLNNIDVAQLRAEEAGTLIDFRERFDRV 143
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A L+ L EY P +
Sbjct: 144 TARAVAQLNILAEYCLPLV 162
>gi|313665699|ref|YP_004047570.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
gi|312949510|gb|ADR24106.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
Length = 232
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+ +++E KL +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 13 NFTINQEIKNKLNLYYQILIEENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKIA 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE- 134
D+G+G GFPG++ I +I+ + LIES NKK +FL+Y+V++ ++ R +E
Sbjct: 73 DIGTGPGFPGVVLKIFFPNIK---LTLIESNNKKVNFLKYLVKRLNLNNVEILNKRAEEL 129
Query: 135 APQMITTCDVISARALADLDTLLE 158
D++ +RA+A LD +LE
Sbjct: 130 TNDYKEQFDIVISRAVAYLDIILE 153
>gi|325663374|ref|ZP_08151824.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470828|gb|EGC74058.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
Length = 240
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
E+ + FY + ++W++ +NL + E+ +H DS+ + + S+ ID+G+G GF
Sbjct: 23 EQFDLFYEILVEWNEFMNLTGITEYEEVNEKHFVDSVSIVKAMDMKSVKSVIDVGTGAGF 82
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMIT 140
PGI I +E V L++S NK+ FL V++K +G + R ++ +
Sbjct: 83 PGIPLKIVFPELE---VVLLDSLNKRVKFLNAVIEKLQLKGIRAIHGRAEDYAKQQEYRE 139
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A+L TL EY P++
Sbjct: 140 QFDLCVSRAVANLATLSEYCLPYV 163
>gi|298502717|ref|YP_003724657.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
gi|298238312|gb|ADI69443.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
Length = 245
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 25 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 84
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 85 IGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFA 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 142 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 172
>gi|224541704|ref|ZP_03682243.1| hypothetical protein CATMIT_00876 [Catenibacterium mitsuokai DSM
15897]
gi|224525373|gb|EEF94478.1| hypothetical protein CATMIT_00876 [Catenibacterium mitsuokai DSM
15897]
Length = 234
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 18/153 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLG 79
+S + +E+ E +Y + ++W++K+NL + + E +++H DSL + P+ + I D+G
Sbjct: 17 LSEKQIEQFEKYYEILVEWNEKMNLTAITDREGVYLKHFYDSLTIAFDFPFSNQTICDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACR 131
+G GFP + I + V +++S NK+ +FL ++ +Q A+R + F
Sbjct: 77 AGAGFPSVPLKIVYPELN---VTIVDSLNKRITFLNHLFKELELDHIQAVASRAEDFCKD 133
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+E + D++ ARA+A L+ L E P +
Sbjct: 134 HRE------SFDIVMARAVARLNILDELCLPLV 160
>gi|224121638|ref|XP_002318633.1| predicted protein [Populus trichocarpa]
gi|222859306|gb|EEE96853.1| predicted protein [Populus trichocarpa]
Length = 288
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 18/153 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSI----W 75
+++ + L+W++K+NL + + V++ RH+EDSL + H SI
Sbjct: 65 KQIRLYVDTLLQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDSYVSHCNASIDSIKL 124
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE 134
+D+G+G G PG++ +I + + V L+ES NK+ FL + + T + +V R +
Sbjct: 125 VDVGTGAGLPGLVLAIACPAWK---VTLLESMNKRCDFLEHAISVTGLSNVEVVRGRAEN 181
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWL 164
Q ++ DV ARA+A++ L EY P +
Sbjct: 182 LGQNVSFREKFDVAVARAVAEMRILAEYCLPLV 214
>gi|154483915|ref|ZP_02026363.1| hypothetical protein EUBVEN_01621 [Eubacterium ventriosum ATCC
27560]
gi|149735406|gb|EDM51292.1| hypothetical protein EUBVEN_01621 [Eubacterium ventriosum ATCC
27560]
Length = 238
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 15/153 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWID 77
++ E +EK + +Y + ++ +K +NL S + ++ I+H DSL +F ++ + ID
Sbjct: 18 ITEEQIEKFDKYYEMLIETNKVMNLTSITEYDEVIIKHFIDSLLVVNIFDINQSKKM-ID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACR 131
+G+G GFPGI I ++ + L++S NK+ FL V+ + G+ A
Sbjct: 77 VGTGAGFPGIPIKIMFPHLQ---ITLLDSLNKRLKFLNNVIDELGLESIETVHGR--AED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I + D+ +RA+A+L TL EY P++
Sbjct: 132 IARKEEFREQYDLCVSRAVANLSTLSEYCIPFI 164
>gi|34557261|ref|NP_907076.1| 16S rRNA methyltransferase GidB [Wolinella succinogenes DSM 1740]
gi|55976473|sp|Q7M9J8|RSMG_WOLSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34482977|emb|CAE09976.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Wolinella succinogenes]
Length = 193
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 17/156 (10%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L TY++ + LE+LE + L L+W++ NL + ++ H+ DSL + P
Sbjct: 8 LKTYHIPFDDQMLERLERYTALLLEWNRAHNLTGAKNSQEVE-EHLIDSLYPLRFLPPFD 66
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRI 132
D+G+G GFPG+I +I L +LIE K+ +FL Y V + + + A RI
Sbjct: 67 SCADIGTGAGFPGLILAIALPKSH---FDLIEPLKKRVAFLHYCVMELGLSNVSIHAKRI 123
Query: 133 Q----EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ EAP D+I++RA+ TLL + P +
Sbjct: 124 EALTLEAP------DLITSRAVTSTQTLLSLARPLI 153
>gi|296875935|ref|ZP_06899994.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis ATCC
15912]
gi|296433010|gb|EFH18798.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis ATCC
15912]
Length = 237
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q + P +D+G+G G
Sbjct: 23 EQYERYFELLVEWNEKINLTAITAKEEVYLKHFYDSIAPILQGLIENQPIRLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL + ++ G + R ++ Q
Sbjct: 83 FPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLNGVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDIVTARAVARMQVLSELTIPYL 164
>gi|21909776|ref|NP_664044.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS315]
gi|28896531|ref|NP_802881.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes SSI-1]
gi|71902936|ref|YP_279739.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS6180]
gi|25090462|sp|Q8K8K3|RSMG_STRP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123640486|sp|Q48V72|RSMG_STRPM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21903961|gb|AAM78847.1| putative glucose inhibited division protein B [Streptococcus
pyogenes MGAS315]
gi|28811785|dbj|BAC64714.1| putative glucose-inhibited division protein [Streptococcus pyogenes
SSI-1]
gi|71802031|gb|AAX71384.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS6180]
Length = 237
Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + Q L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFL 164
>gi|310644869|ref|YP_003949628.1| ribosomal RNA small subunit methyltransferase g [Paenibacillus
polymyxa SC2]
gi|309249820|gb|ADO59387.1| Ribosomal RNA small subunit methyltransferase G [Paenibacillus
polymyxa SC2]
Length = 240
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
++ LE+ E +Y + ++W++K+NL + E + +H DS+ + P + D+
Sbjct: 19 INDSQLEQFETYYRVLVEWNEKMNLTGITEREAVYTKHFYDSVSLAFYVPLNDVESLADI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
GSG GFPGI I I+ + +++S NK+ FL +VV++ ++ R +E +
Sbjct: 79 GSGAGFPGIPLKICFPHIQ---LTIVDSLNKRIQFLAHVVEQLGLENVELIHSRAEELGR 135
Query: 138 MI---TTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A L L E+ P++ +
Sbjct: 136 KAGYRDSYDLVTARAVARLAVLNEFCLPFVRE 167
>gi|19745444|ref|NP_606580.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS8232]
gi|139474384|ref|YP_001129100.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes str.
Manfredo]
gi|306827980|ref|ZP_07461247.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
gi|23821582|sp|Q8P2K1|RSMG_STRP8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224622|sp|A2RGB9|RSMG_STRPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19747557|gb|AAL97079.1| putative glucose-inhibited division protein [Streptococcus pyogenes
MGAS8232]
gi|134272631|emb|CAM30898.1| methyltransferase GidB [Streptococcus pyogenes str. Manfredo]
gi|304429899|gb|EFM32941.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
Length = 237
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + Q L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFL 164
>gi|257888105|ref|ZP_05667758.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|293379357|ref|ZP_06625501.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
gi|257824159|gb|EEV51091.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|292641880|gb|EFF60046.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
Length = 237
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 79/147 (53%), Gaps = 8/147 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLH-PYPSIWIDLGSGGG 83
+++ +Y ++W++K+NL + + +D +++H DSL + F++ P D+GSG G
Sbjct: 22 MDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAFEVDFTQPLSLCDVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---EAPQMIT 140
FP I I ++ + +++S NK+ +FL + + ++ R + + PQ
Sbjct: 82 FPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDASLYHDRAETFGQNPQFRA 138
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
+ D+++ARA+A L+ L E P Q+
Sbjct: 139 SFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|163814997|ref|ZP_02206384.1| hypothetical protein COPEUT_01150 [Coprococcus eutactus ATCC 27759]
gi|158449680|gb|EDP26675.1| hypothetical protein COPEUT_01150 [Coprococcus eutactus ATCC 27759]
Length = 236
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 83/150 (55%), Gaps = 11/150 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWID 77
+S + L++ +Y + ++W+ +NL + + +D I+H DSL +++ LH S+ +D
Sbjct: 15 LSEKQLQQFSRYYDILVEWNSFMNLTAITDRDDVIIKHFADSLLLYKYKDLHDNLSV-LD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA- 135
+G+G GFPGI I ++ V L++S NK+ +FL V+++ + R ++
Sbjct: 74 VGTGAGFPGIPLKIAFPELK---VTLMDSLNKRLNFLNEVIKELELDNVETVHSRAEDGG 130
Query: 136 --PQMITTCDVISARALADLDTLLEYSFPW 163
P D++ +RA+A+L TL E+ P+
Sbjct: 131 KNPLYREKYDLVVSRAVANLATLSEWCLPF 160
>gi|209558836|ref|YP_002285308.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes NZ131]
gi|238058259|sp|B5XJV1|RSMG_STRPZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209540037|gb|ACI60613.1| Methyltransferase gidB [Streptococcus pyogenes NZ131]
Length = 237
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + Q L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFL 164
>gi|313885633|ref|ZP_07819383.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619363|gb|EFR30802.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
Length = 239
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 16/154 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWI 76
N+ +++ E +Y ++W++KINL + + ++ +++H DSL L I
Sbjct: 16 NLDSRQIQQFESYYQFLVEWNQKINLTAITEQKEVYLKHFYDSLAPLWLTDKIQADKALI 75
Query: 77 DLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVV------QKTAARGKVFA 129
D+G+G GFP SI L+ + GL V +++S NK+ FL +V Q A G+ A
Sbjct: 76 DIGAGAGFP----SIPLAIAQPGLRVTIVDSLNKRIKFLEVLVEALGLDQVQALHGR--A 129
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + + D+++ARA+A L+ L EY P+
Sbjct: 130 EDLGQDKRYRQNFDLVTARAVAQLNVLAEYCLPF 163
>gi|167751434|ref|ZP_02423561.1| hypothetical protein EUBSIR_02430 [Eubacterium siraeum DSM 15702]
gi|167655680|gb|EDR99809.1| hypothetical protein EUBSIR_02430 [Eubacterium siraeum DSM 15702]
Length = 232
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
+S++ +KL Y +++++ +NL + + E+ ++H DS+ F + S +ID+
Sbjct: 18 LSQDKADKLLKLYEFLVEYNQNVNLTAITDFEEVVVKHFIDSVLPFSMIDIKENSSFIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQ 137
G+G GFP I I ++G L+E+ NK+ FL + T KV R ++ A +
Sbjct: 78 GTGAGFPSIPLMIVRPDLKG---TLLEALNKRCVFLEKACELTEVDAKVIHGRAEDYAKE 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D +ARA+A + L EY P++
Sbjct: 135 KREAFDFATARAVAAMPVLCEYCIPYV 161
>gi|303254470|ref|ZP_07340575.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|303258921|ref|ZP_07344900.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|303264274|ref|ZP_07350194.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
gi|302598556|gb|EFL65597.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|302639864|gb|EFL70320.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|302646086|gb|EFL76313.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
Length = 237
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSDQQKEQFECYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|269837891|ref|YP_003320119.1| methyltransferase GidB [Sphaerobacter thermophilus DSM 20745]
gi|269787154|gb|ACZ39297.1| methyltransferase GidB [Sphaerobacter thermophilus DSM 20745]
Length = 243
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-------RVFQLHP-YPSIWI 76
L++ + L L W+++INL + + IR DSL R + +P P
Sbjct: 22 ALDRFARYRDLLLDWNRRINLTRVTEPTEVEIRLFADSLLLIPYLRRFREANPDNPPRLA 81
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT------AARGKVFAC 130
D+G+GGGFPG+ I + ++ + LIE+ KK +FL + A G+ A
Sbjct: 82 DVGAGGGFPGLPLKIAMPDLD---LTLIEATGKKVAFLDAAIAALDLAGARAVHGR--AE 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ P DV++ARA+A + TLLEY P L
Sbjct: 137 ELAHLPDYRGRFDVVTARAVARMPTLLEYCLPLL 170
>gi|168214840|ref|ZP_02640465.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
gi|170713738|gb|EDT25920.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
Length = 239
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
+K + L +W++KINL + + E+ +H D ++ F+ + ID+G+G GF
Sbjct: 24 QKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKTVIDVGTGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMIT 140
PG+ +I +E V L++S NK+ +FL VV K + + R ++ ++
Sbjct: 84 PGLPIAIMRGDVE---VTLLDSLNKRINFLNEVVNKLGLKNVETIHSRAEDGARKKELRE 140
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
+ D+ ++RA+A++ L E+ P++
Sbjct: 141 SFDIATSRAVANMCVLSEFCIPYV 164
>gi|88811303|ref|ZP_01126559.1| glucose-inhibited division protein B [Nitrococcus mobilis Nb-231]
gi|88791842|gb|EAR22953.1| glucose-inhibited division protein B [Nitrococcus mobilis Nb-231]
Length = 203
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSG 81
+ +E+ + L +W++ NL + D +RHV DSL V HPY +D+GSG
Sbjct: 10 DLVERHLRYIELLQRWNRTFNLTAIRAPLDMVVRHVLDSLTV---HPYVRGDRVLDVGSG 66
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PGI + L+S E +V L++S KK FLR VV + A E +
Sbjct: 67 AGLPGI--PLALASPEHSVV-LLDSNGKKIRFLRQVVFELALTNVTVVQARAERFRPALP 123
Query: 142 CDVISARALADLDTLLEYSFPWL 164
D + ARA ADL LL ++P L
Sbjct: 124 FDTVIARAFADLPALLRIAWPLL 146
>gi|77405787|ref|ZP_00782871.1| methyltransferase GidB [Streptococcus agalactiae H36B]
gi|77175574|gb|EAO78359.1| methyltransferase GidB [Streptococcus agalactiae H36B]
Length = 237
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + E+ +++H DS+ + Q + P +D+G+G G
Sbjct: 23 KQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDNSPLSILDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP I I I+ + +I+S NK+ +FL + K G F R ++ Q
Sbjct: 83 FPSIPMKILYPEID---ITIIDSLNKRINFLNILANKLELSGVHFFHGRAEDFGQDKVFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AKFDIVTARAVARMQVLAELTIPFL 164
>gi|323141445|ref|ZP_08076335.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium sp. YIT
12067]
gi|322414101|gb|EFY04930.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium sp. YIT
12067]
Length = 239
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 74/142 (52%), Gaps = 7/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE+ +Y L ++ +K +NL + + E+ ++H+ DSL ++ D+G+G GFP
Sbjct: 23 LEQFSRYYELLVETNKVMNLTAITEPEEVAVKHMVDSLLAYEAEMAGKTLADVGTGAGFP 82
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMITT 141
G+ I ++ V LI+S K+ FL+ V+++ +G + R ++A +
Sbjct: 83 GVPLKIYCPELK---VTLIDSLGKRLRFLQQVIEELGVKGIRCEHLRAEDAGRDKKHREK 139
Query: 142 CDVISARALADLDTLLEYSFPW 163
D ++ARA+A L L EY P
Sbjct: 140 YDYVTARAVARLSVLSEYCLPL 161
>gi|260887476|ref|ZP_05898739.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|330840114|ref|YP_004414694.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|260862763|gb|EEX77263.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|329747878|gb|AEC01235.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
Length = 238
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSI-WIDLGSGGG 83
+EK +Y L ++W+ K+NL + + + ++H+ DSL + + S+ ID+G+G G
Sbjct: 22 IEKFGIYYRLIIEWNAKMNLTAITEPREVAVKHIVDSLTALRGIEERDSLRLIDVGTGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FPGI I ++ + L++S K+ FL VV+ G + R +EA + +
Sbjct: 82 FPGIPLKIVRPDLK---LTLLDSLKKRVHFLETVVEALGLEGAECLHGRAEEAARQSALR 138
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+ ++RA+A L L EY P++
Sbjct: 139 ERFDIAASRAVARLPVLAEYLLPFV 163
>gi|168207745|ref|ZP_02633750.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
gi|170660931|gb|EDT13614.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
Length = 239
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
+K + L +W++KINL + + E+ +H D ++ F+ + ID+G+G GF
Sbjct: 24 QKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKTVIDVGTGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMIT 140
PG+ +I +E V L++S NK+ +FL VV K + + R ++ ++
Sbjct: 84 PGLPIAIMREDVE---VTLLDSLNKRINFLNEVVNKLGLKNVETIHSRAEDGARKKELRE 140
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ ++RA+A++ L E+ P++
Sbjct: 141 NFDIATSRAVANMCVLSEFCIPYV 164
>gi|166032901|ref|ZP_02235730.1| hypothetical protein DORFOR_02622 [Dorea formicigenerans ATCC
27755]
gi|166027258|gb|EDR46015.1| hypothetical protein DORFOR_02622 [Dorea formicigenerans ATCC
27755]
Length = 239
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIIT 89
FY + ++W+K +NL + ++ ++H DSL + +++ + ++ ID+G+G GFPGI
Sbjct: 30 FYEMLVEWNKVMNLTGITEYDEVVMKHFVDSLSIVKVNGFDNVTTIIDVGTGAGFPGIPL 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITT 141
I I+ + L++S NK+ FL V ++ R + F+ + Q
Sbjct: 90 KIVFPEIK---ITLLDSLNKRIKFLNAVIDELELENIETIHGRAEDFSKKEDYREQY--- 143
Query: 142 CDVISARALADLDTLLEYSFPWL 164
D+ +RA+A+L TL EY P++
Sbjct: 144 -DLCVSRAVANLATLSEYCLPYV 165
>gi|222152552|ref|YP_002561727.1| 16S rRNA methyltransferase GidB [Streptococcus uberis 0140J]
gi|254766906|sp|B9DTP3|RSMG_STRU0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222113363|emb|CAR40979.1| methyltransferase GidB [Streptococcus uberis 0140J]
Length = 237
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 12/146 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSIWIDLGSGG 82
E+ + ++ ++W+ KINL + + D +++H DS+ LH Y P +D+G+G
Sbjct: 23 EQFDIYFQTLVEWNDKINLTAITEKNDVYLKHFYDSIAPI-LHGYIKNEPIKLLDIGAGA 81
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT- 140
GFP I I ++ + +I+S NK+ +FL+ + + G F R ++ Q I
Sbjct: 82 GFPSIPMKIIYPQLD---ITIIDSLNKRITFLKQLSEVLHLEGVHFFHGRAEDFGQDINF 138
Query: 141 --TCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 139 RAQFDIVTARAVARMQILSELTIPFL 164
>gi|169343470|ref|ZP_02864470.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|182626391|ref|ZP_02954144.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
gi|169298422|gb|EDS80511.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|177908265|gb|EDT70818.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
Length = 239
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
+K + L +W++KINL + + E+ +H D ++ F+ + ID+G+G GF
Sbjct: 24 QKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKTVIDVGTGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMIT 140
PG+ +I +E V L++S NK+ +FL VV K + + R ++ ++
Sbjct: 84 PGLPIAIMREDVE---VTLLDSLNKRINFLNEVVNKLGLKNVETIHSRAEDGARKKELRE 140
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ ++RA+A++ L E+ P++
Sbjct: 141 NFDIATSRAVANMCVLSEFCIPYV 164
>gi|94993669|ref|YP_601767.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10750]
gi|166224621|sp|Q1J8D8|RSMG_STRPF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94547177|gb|ABF37223.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10750]
Length = 237
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPS 73
+ ++++ + E+ + ++ L ++W+ KINL + + + +++H DS+ + Q L P
Sbjct: 13 DGFSLASKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFL 164
>gi|313890867|ref|ZP_07824491.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
gi|313120765|gb|EFR43880.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
Length = 237
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSI 74
Y + ++ ++ + ++ + ++W++KINL + + D +++H DS+ L Y P
Sbjct: 15 YELKQKQKDQFDTYFKVLIEWNQKINLTAITEKNDVYLKHFYDSIAPI-LQGYIPNQPIQ 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL ++ Q+ G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKIIFPQLQ---VTIIDSLNKRITFLAHLTQELDLDGVTFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
+ Q + D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKGFRSKYDLVTARAVARMQILSELTIPFL 164
>gi|149182299|ref|ZP_01860778.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
gi|148849991|gb|EDL64162.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
Length = 238
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI-D 77
N++ + L + +Y ++W+ K+NL + + E+ +++H DS+ F L I + D
Sbjct: 16 NLTSKQLAQFAEYYETLVEWNNKMNLTAITDKEEVYLKHFYDSITAAFYLDFNREIRVCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I IE V++++S NK+ +FL ++ K G F A
Sbjct: 76 VGAGAGFPSIPLKICFPQIE---VSIVDSLNKRITFLNHLSDKLGLEGTHFYHDRAETFA 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
P+ D+++ARA+A + L E P +
Sbjct: 133 RNPEHREQYDLVTARAVARMSVLSELCLPLV 163
>gi|257896276|ref|ZP_05675929.1| glucose inhibited division protein [Enterococcus faecium Com12]
gi|257832841|gb|EEV59262.1| glucose inhibited division protein [Enterococcus faecium Com12]
Length = 237
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLH-PYPSIWID 77
++ +++ +Y ++W++K+NL + + +D +++H DSL + F++ P D
Sbjct: 16 ELTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAFEVDFTQPLSLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---E 134
+GSG GFP + I ++ + +++S NK+ +FL + + ++ R + +
Sbjct: 76 VGSGAGFPSMPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDASLYHDRAETFGQ 132
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
PQ + D+++ARA+A L+ L E P Q+
Sbjct: 133 NPQFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|326386155|ref|ZP_08207779.1| methyltransferase GidB [Novosphingobium nitrogenifigens DSM 19370]
gi|326209380|gb|EGD60173.1| methyltransferase GidB [Novosphingobium nitrogenifigens DSM 19370]
Length = 252
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 21/169 (12%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+L+ T V +E+L + + +++ NLV+ ++++ W RH+ DS ++ + S
Sbjct: 14 WLVETLGVDAAGMERLGRLVDMLREENERQNLVARASLDQVWQRHIVDSAQLLSVSRGTS 73
Query: 74 I------WIDLGSGGGFPG-IITSIQLSSIEGGLVNLIESKNKKASFL-RYVVQKTAARG 125
W+DLG+G GFPG +I ++Q V L++S+ + +L R R
Sbjct: 74 AGEGLGSWLDLGTGAGFPGLVIAALQPERP----VVLVDSRRLRTEWLARAASTLGLDRV 129
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLL----EYSFP---WLYQK 167
+V R+++ P + T VISARA A L+ LL +S P WL K
Sbjct: 130 EVVLSRVEDLP--VGTHAVISARAFAPLERLLPLAARFSTPETLWLLPK 176
>gi|160946573|ref|ZP_02093776.1| hypothetical protein PEPMIC_00531 [Parvimonas micra ATCC 33270]
gi|158446957|gb|EDP23952.1| hypothetical protein PEPMIC_00531 [Parvimonas micra ATCC 33270]
Length = 244
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLGSGG 82
LEK E + L L+W++KINL + + E +H D L + + L +D+G+G
Sbjct: 26 ALEKFEIYRKLILEWNEKINLTAITDEEAMNTKHFLDCLLLTKTGLFDDDKSILDVGTGA 85
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---M 138
GFP I + +++ V +++S NK+ FL V++ + K R +E +
Sbjct: 86 GFPAIPLKLYNENLK---VTMLDSLNKRIKFLNIVIEDLNLKNIKAIHGRAEEVGRKEGF 142
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ D++S+RA+A L LLE++ P+L
Sbjct: 143 RESFDIVSSRAVASLSLLLEFTIPFL 168
>gi|317050326|ref|YP_004111442.1| methyltransferase GidB [Desulfurispirillum indicum S5]
gi|316945410|gb|ADU64886.1| methyltransferase GidB [Desulfurispirillum indicum S5]
Length = 203
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 20 NVSRETLEKL-EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWID 77
++ RE L L E + ++W++ L + + + + RH DS+ V L P ++ ID
Sbjct: 10 DLGREELLPLFELYCQELVRWNRAKKLTAITERAEVYDRHFLDSVHGVDGLLPQGALVID 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G G GFPG+ + I + ++S +KK +F+R++ +K +G + F R +E
Sbjct: 70 IGCGAGFPGLPLKMLRPDIH---LIAVDSISKKIAFVRHMARKLGLQGVECFDRRAEELT 126
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q+ DV++ RA+AD L++ P+L Q
Sbjct: 127 QLHAKADVVTFRAVADSALLVKIGLPFLKQ 156
>gi|227550629|ref|ZP_03980678.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
gi|227180230|gb|EEI61202.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
Length = 242
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLH-PYPSIWID 77
++ +++ +Y ++W++K+NL + + +D +++H DSL + F++ P D
Sbjct: 21 ELTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAFEVDFTQPLSLCD 80
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---E 134
+GSG GFP + I ++ + +++S NK+ +FL + + ++ R + +
Sbjct: 81 VGSGAGFPSMPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDASLYHDRAETFGQ 137
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
PQ + D+++ARA+A L+ L E P Q+
Sbjct: 138 NPQFRASFDLVTARAVARLNVLAELCLPLAKQE 170
>gi|189485616|ref|YP_001956557.1| glucose-inhibited cell division protein GidB [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|170287575|dbj|BAG14096.1| glucose-inhibited cell division protein GidB [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 276
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH----------VEDSLRVFQLHPY 71
S+ET +K E +++ KW+KK NL+S + D RH + D L V++L Y
Sbjct: 27 SKETRKKFETYFYELNKWNKKFNLISFKNIRDLVYRHFCDSLYSAKAISDILTVYRLSIY 86
Query: 72 PS-------------------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
DLG+G G PGI I L I+ + LIES KK
Sbjct: 87 SKRKRKREGAGRKQKSAESAFKVADLGTGSGMPGIPVKIALPCIK---LTLIESITKKCR 143
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMIT---TCDVISARALADLDTLLEYSFPWL 164
FL + K ++ R +E Q + D I +RA++ L LE S P L
Sbjct: 144 FLNNINNKLGFNTEILNKRAEEIGQNTSYRQQYDFILSRAVSKLSPNLEISIPLL 198
>gi|169351490|ref|ZP_02868428.1| hypothetical protein CLOSPI_02270 [Clostridium spiroforme DSM 1552]
gi|169291712|gb|EDS73845.1| hypothetical protein CLOSPI_02270 [Clostridium spiroforme DSM 1552]
Length = 233
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLG 79
+S + +E+ + ++ L ++W++K+NL + + E +++H DS+ + F +D+G
Sbjct: 17 LSDKQIEQFDKYFKLLVEWNEKMNLTAITDEESVYLKHFYDSITIAFDFEFASQSIVDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE-APQ 137
+G GFP I I ++ V +++S K+ +FL ++ K + R +E A +
Sbjct: 77 AGAGFPSIPLKIIYPDLK---VTIVDSLTKRITFLNHLFGALELTNCKAISARAEEYAKE 133
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
CDV+ ARA+A L+ L E P +
Sbjct: 134 NREKCDVVMARAVARLNILDELCLPLV 160
>gi|172059047|ref|YP_001815507.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
gi|229558761|sp|B1YGA6|RSMG_EXIS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171991568|gb|ACB62490.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
Length = 238
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI--D 77
VS L++ +Y L ++W++K+NL + + E +++H DS+ + + D
Sbjct: 16 EVSDHQLQQFRKYYELLVEWNEKMNLTAITDEEGVYLKHFYDSITAAFYFDFTKVETVCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ FL + + G F A
Sbjct: 76 VGAGAGFPSLPIKIMFPHLK---VTIIDSLNKRIGFLNMLATELGLEGVAFHHGRAEEFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFP 162
+ Q DV++ARA+A + L EY P
Sbjct: 133 KNKQFREHFDVVTARAVARMSVLAEYCLP 161
>gi|317131000|ref|YP_004097282.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
gi|315475948|gb|ADU32551.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
Length = 237
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N++L LNT + L++ +Y L ++W++K+NL + + ED +++H DS+ V
Sbjct: 8 NALLERGIHLNT-----DQLKQFHDYYELLVEWNEKMNLTAITDKEDVYLKHFFDSVSVS 62
Query: 67 QLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
H + +D+G+G GFP I I ++ V +++S NK+ +FL + +K + +
Sbjct: 63 FYHDFKEQKSIVDVGAGAGFPSIPLKICYPHLK---VTIVDSLNKRITFLNALAEKLSLK 119
Query: 125 GKVF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F A + + T D ARA+A L L E P + Q
Sbjct: 120 EVSFYHDRAEDFGKKKEHRETYDTALARAVARLPVLAELCMPLVKQ 165
>gi|322376832|ref|ZP_08051325.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
gi|321282639|gb|EFX59646.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
Length = 237
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + ++ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A +
Sbjct: 77 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDLA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAHYDFVTARAVARMQVLSELTIPYL 164
>gi|256381070|ref|YP_003104730.1| methyltransferase GidB [Actinosynnema mirum DSM 43827]
gi|255925373|gb|ACU40884.1| methyltransferase GidB [Actinosynnema mirum DSM 43827]
Length = 223
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F + + + L+ V+ W RHV +S V +L P S +D+GSG G PGI +I
Sbjct: 23 FTAMLTEHGVERGLIGPREVDRLWERHVLNSAVVAELLPQGSKVVDVGSGAGLPGIPLAI 82
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISARA 149
+E + L+E ++ ++L VV + +V R +E P + + DV++ARA
Sbjct: 83 ARPDLE---LVLLEPMARRVAWLTEVVDALGLQVEVVRGRAEEGPVRKRLADRDVVTARA 139
Query: 150 LADLDTLLEYSFPWL 164
+A L+ L + P L
Sbjct: 140 VAPLERLAGWCLPLL 154
>gi|94989784|ref|YP_597884.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10270]
gi|166224620|sp|Q1JII3|RSMG_STRPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94543292|gb|ABF33340.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10270]
Length = 237
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWID 77
+S + E+ + ++ L ++W+ KINL + + + +++H DS+ + Q L P +D
Sbjct: 17 LSSKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIAPILQGFLANEPIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R ++
Sbjct: 77 IGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRAEDFG 133
Query: 137 Q---MITTCDVISARALADLDTLLEYSFPWL 164
Q DV++ARA+A + L E + P+L
Sbjct: 134 QDKAFRGQFDVVTARAVARMQVLSELTIPFL 164
>gi|168218048|ref|ZP_02643673.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
gi|182379950|gb|EDT77429.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
Length = 239
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
+K + L +W++KINL + + E+ +H D ++ F+ + ID+G+G GF
Sbjct: 24 QKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFIDCIKAFKADEFKKAKTVIDVGTGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMIT 140
PG+ +I +E V L++S NK+ +FL V+ K + + R ++ ++
Sbjct: 84 PGLPIAIMREDVE---VTLLDSLNKRINFLNEVINKLGLKNVETIHSRAEDGARKKELRE 140
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ ++RA+A++ L E+ P++
Sbjct: 141 NFDIATSRAVANMCVLSEFCIPYV 164
>gi|322390107|ref|ZP_08063642.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
gi|321143234|gb|EFX38677.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
Length = 237
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIW 75
+ V+ E+ E ++ L ++W++KINL + + ++ +++H DS+ + Q + P
Sbjct: 15 FPVTDRQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIAPILQGLIENQPIRL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+G GFP + I ++ V +I+S NK+ +FL + ++ G + R ++
Sbjct: 75 LDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAED 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWL 164
Q D+++ARA+A + L E + P+L
Sbjct: 132 FAQDKAFRAQFDIVTARAVARMQVLSELTIPYL 164
>gi|154495104|ref|ZP_02034109.1| hypothetical protein PARMER_04151 [Parabacteroides merdae ATCC
43184]
gi|154085654|gb|EDN84699.1| hypothetical protein PARMER_04151 [Parabacteroides merdae ATCC
43184]
Length = 223
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
++++ + L+ W+ KIN++S +E+ ++ HV SL + ++ + S +D+G+GGGF
Sbjct: 34 QQIDALFDLYSDWNSKINVISRKDIENLYLHHVLHSLGILKMLKFREGSTIMDIGTGGGF 93
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCD 143
PGI +I L ++ +L++S KK + V + + F CR +E Q+ D
Sbjct: 94 PGIPLAILLPEVQ---FHLVDSIGKKIKVGQAVAEAIGLKNVTFRHCRAEEEKQLF---D 147
Query: 144 VISARALADLDTLLEYS 160
+ +RA+ L L++ +
Sbjct: 148 FVVSRAVMPLADLVKIA 164
>gi|42561430|ref|NP_975881.1| glucose-inhibited division protein B [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|81618795|sp|Q6MS67|RSMG_MYCMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|42492928|emb|CAE77523.1| glucose-inhibited division protein B [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|301320699|gb|ADK69342.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 137
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+ +++E KL+ +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 13 NFTINQEIKNKLDLYYQILIQENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKIA 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G GFPGI+ I +I+ + LIES NKKA+FL+Y+VQK
Sbjct: 73 DIGTGAGFPGIVLKIFFPNIK---LTLIESNNKKANFLKYLVQK 113
>gi|291005730|ref|ZP_06563703.1| methyltransferase GidB [Saccharopolyspora erythraea NRRL 2338]
Length = 235
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L E F L + + L+ ++ W RH+ +S + +L P +D+GSG G
Sbjct: 21 DELTTAERFAELLREHGVRRGLIGPRELDRLWERHLLNSAVLAELLPPNCRVVDVGSGAG 80
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI SI +E + L+E ++ ++L+ V+ + +V R +E P + +
Sbjct: 81 LPGIPLSIARPDLE---LTLLEPMARRVAWLQEVITELGLNAEVMRGRAEEGPVRERLAD 137
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A + L ++ P L +
Sbjct: 138 QDVVTARAVAPMARLAKWCLPLLRPE 163
>gi|229826127|ref|ZP_04452196.1| hypothetical protein GCWU000182_01492 [Abiotrophia defectiva ATCC
49176]
gi|229789700|gb|EEP25814.1| hypothetical protein GCWU000182_01492 [Abiotrophia defectiva ATCC
49176]
Length = 239
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ E +KL FY + + +K +NL + + E+F I+H DSL + ++ P +D+
Sbjct: 18 ITSEQCDKLYRFYEMVTEKNKVMNLTAITDYEEFVIKHFVDSLMIAKVMDMKAPMTVLDI 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFPG+ I + + V L++S NK+ +FL V+++ + A +Q
Sbjct: 78 GTGAGFPGVPIKIVYPATK---VLLLDSLNKRLNFLNEVIEELGLKDITTIHSRAEELQA 134
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+ +RA++ L TL EY P++
Sbjct: 135 KGEYRENFDLCVSRAVSALPTLSEYCLPYV 164
>gi|225867913|ref|YP_002743861.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
gi|259495620|sp|C0MG47|RSMG_STRS7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225701189|emb|CAW98104.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
Length = 237
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSI 74
+ ++ E+ + ++ L + W++KINL + + + +++H DS+ L Y P
Sbjct: 15 FALTNHQKEQFDTYFKLLIDWNRKINLTAITEENEVYLKHFYDSVAPL-LQGYIPNEPLR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----AC 130
+D+G+G GFP I I ++ V +I+S NK+ FL+ + ++ G F A
Sbjct: 74 LLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIQFLQLLAKELGLEGVHFYHGRAE 130
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKQFRGQFDLVTARAVARMQILSELTIPFL 164
>gi|94987908|ref|YP_596009.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS9429]
gi|166224619|sp|Q1JND4|RSMG_STRPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94541416|gb|ABF31465.1| methyltransferase [Streptococcus pyogenes MGAS9429]
Length = 237
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 82/156 (52%), Gaps = 12/156 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYP 72
+ +++S + E+ + ++ L ++W+ KINL + + + + +H DS L+ F L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYPQHFYDSIAPILQAF-LANEP 71
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 72 IKLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGR 128
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q DV++ARA+A + L E + P+L
Sbjct: 129 AEDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFL 164
>gi|22537769|ref|NP_688620.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae 2603V/R]
gi|76799422|ref|ZP_00781572.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
gi|29336666|sp|Q8DY64|RSMG_STRA5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22534661|gb|AAN00493.1|AE014266_4 glucose-inhibited division protein B [Streptococcus agalactiae
2603V/R]
gi|76585231|gb|EAO61839.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
Length = 237
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + E+ +++H DS+ + Q + P +D+G+G G
Sbjct: 23 KQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDNSPLSILDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP I I I+ + +I+S NK+ +FL + + G F R ++ Q
Sbjct: 83 FPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDRVFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AKFDIVTARAVAKMQVLAELTIPFL 164
>gi|289168084|ref|YP_003446353.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
gi|288907651|emb|CBJ22488.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
Length = 237
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WIDLGSGGG 83
E+ E ++ L ++W++KINL + + ++ +++H DS+ + Q L P +I +D+G+G G
Sbjct: 23 EQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIPNETIKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMI 139
FP + I ++ V +I+S NK+ +FL+ + Q+ G F A +
Sbjct: 83 FPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELNLEGVHFYHGRAEDFAQDKNFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D ++ARA+A + L E + P+L
Sbjct: 140 AQYDFVTARAVARMQVLSELTIPYL 164
>gi|182416728|ref|ZP_02948127.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237669667|ref|ZP_04529645.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379385|gb|EDT76880.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237654901|gb|EEP52463.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 239
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + E+ + L +W++KINL + + E+ +H D ++ F+ + ID+
Sbjct: 18 LSEQQYERFMKYMRLLQEWNEKINLTAITEDEEVVKKHFIDCIKAFKRDEFKKAETLIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+G GFPG+ +I ++ V L++S NK+ +FL VVQ+ + R ++ +
Sbjct: 78 GTGAGFPGLPIAIMREDLK---VTLLDSLNKRINFLNTVVQELGLKNVTTIHSRAEDGAR 134
Query: 138 ---MITTCDVISARALADLDTLLEYSFPWL 164
+ D+ ++RA+A++ L E+ P++
Sbjct: 135 NKDLREQFDISTSRAVANMSVLSEFCLPYV 164
>gi|50913652|ref|YP_059624.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10394]
gi|73919635|sp|Q5XDS2|RSMG_STRP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50902726|gb|AAT86441.1| Methyltransferase [Streptococcus pyogenes MGAS10394]
Length = 237
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ + Q L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDAVTARAVARMQVLSELTIPFL 164
>gi|85861012|ref|YP_463214.1| methyltransferase [Syntrophus aciditrophicus SB]
gi|123517892|sp|Q2LY85|RSMG_SYNAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85724103|gb|ABC79046.1| methyltransferase [Syntrophus aciditrophicus SB]
Length = 241
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 39 WSKKINLVSSS-TVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSI 96
W+ +INL++S+ +V D I+H DSL + P+P ID+G+GGGFPGI I L+S+
Sbjct: 54 WNSRINLIASAESVTDIVIKHFLDSLTLIPCIPFPDGRLIDIGTGGGFPGIPLKIALNSL 113
Query: 97 EGGLVNLIESKNKKASFLR 115
+ V L+E+ KK SFL+
Sbjct: 114 K---VTLLEASRKKVSFLK 129
>gi|55820410|ref|YP_138852.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMG
18311]
gi|55822292|ref|YP_140733.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
CNRZ1066]
gi|81559821|sp|Q5M1E6|RSMG_STRT1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81560991|sp|Q5M5Y2|RSMG_STRT2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55736395|gb|AAV60037.1| glucose-inhibited division protein B [Streptococcus thermophilus
LMG 18311]
gi|55738277|gb|AAV61918.1| glucose-inhibited division protein B [Streptococcus thermophilus
CNRZ1066]
gi|312277715|gb|ADQ62372.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
thermophilus ND03]
Length = 237
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLH-PYPSI-W 75
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL V Q H SI
Sbjct: 15 FDLSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLAPVLQGHIKNQSIQL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
+D+G+G GFP + I +++ V +I+S NK+ +FL ++ + G F A
Sbjct: 75 LDIGAGAGFPSLPIKILCPNLD---VTIIDSLNKRITFLNFLSDELGLSGVHFYHGRAED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 132 FGQDKAFRAQFDIVTARAVARMQVLSELTIPFL 164
>gi|327398257|ref|YP_004339126.1| Ribosomal RNA small subunit methyltransferase G [Hippea maritima
DSM 10411]
gi|327180886|gb|AEA33067.1| Ribosomal RNA small subunit methyltransferase G [Hippea maritima
DSM 10411]
Length = 195
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH-VEDSLRVFQLH 69
R + ++ + EKL + +W+K I L+S E+ + H V SL F+
Sbjct: 7 RLEKVFKKVDIPQNGTEKLITYIETLQEWNKNIALISKR--EENIVNHLVAPSLLFFKFF 64
Query: 70 PYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
++ +D+GSG GFP ++ I S++ V +IE NKKA+FL Y+ K + +
Sbjct: 65 RDNNLSVVDIGSGAGFPAVVIKIYKPSLD---VIMIEPNNKKAAFLNYICAKLKLKCNII 121
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLE 158
RI++ I CDVI+ARAL ++ L+E
Sbjct: 122 NKRIEQINNPI-ECDVITARAL-NIKPLIE 149
>gi|323342285|ref|ZP_08082517.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463397|gb|EFY08591.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 238
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS E ++ + L + +K +NL E +++H DSL + L S D+GS
Sbjct: 17 VSEEMKQQFLTYKNLIQEVNKVLNLTGIDDDEGIFLKHFYDSLLISPLIKENSSIADIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA-PQM 138
G GFPGI+ +I + V IE K+ +FL VVQ+ + V R ++ ++
Sbjct: 77 GAGFPGIVLAIARPDV---TVTCIEPTTKRTNFLERVVQECGLKNTIVLNGRAEDVIGEL 133
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ DV +ARA+A LD L E P++
Sbjct: 134 RESFDVATARAVAYLDILSELCLPFV 159
>gi|311745733|ref|ZP_07719518.1| 16S rRNA methyltransferase GidB [Algoriphagus sp. PR1]
gi|126575176|gb|EAZ79526.1| 16S rRNA methyltransferase GidB [Algoriphagus sp. PR1]
Length = 214
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N++ + + K + L+ W+ KIN++S ++ F+I HV SL +V P I +
Sbjct: 14 NLTEDQIAKFDRLQELYEDWNSKINVISRKDMDQFYIHHVLHSLGISKVMNFQPGTKI-L 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-- 134
D+G+GGGFPGI +I +L++S KK + VV+ A + K+ Q+
Sbjct: 73 DIGTGGGFPGIPLAILFPDTH---FHLVDSIGKKIT----VVKDVAKQLKLANVEAQQTR 125
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q++ D + +RA+ T + +PW+ K
Sbjct: 126 AEQLVRKYDFVISRAV----TRMANFYPWVKNK 154
>gi|224369582|ref|YP_002603746.1| GidB [Desulfobacterium autotrophicum HRM2]
gi|223692299|gb|ACN15582.1| GidB [Desulfobacterium autotrophicum HRM2]
Length = 228
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
LKW++K N+ S + + +H DSL + P + +D+GSGGGFPG+ +
Sbjct: 49 LLKWNRKFNITSITDPREMATKHFIDSLAIAPHIPENARVLDMGSGGGFPGVPLKVVRPD 108
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAPQMITTCDVISA 147
+E V L+++ K+ SFL +V T AR ++ A + P DV+++
Sbjct: 109 LE---VVLVDASRKRVSFLNRLVSLTGLKSITAVHARAEILA----KDPAFAGRFDVVTS 161
Query: 148 RALADLDTLLEYSFPWL 164
RA LD + + P+L
Sbjct: 162 RAFTALDRFVVLAAPFL 178
>gi|83591333|ref|YP_431342.1| methyltransferase GidB [Moorella thermoacetica ATCC 39073]
gi|123523727|sp|Q2RFJ0|RSMG_MOOTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83574247|gb|ABC20799.1| 16S rRNA m(7)G-527 methyltransferase [Moorella thermoacetica ATCC
39073]
Length = 240
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D + +L A + E + +E + L L +++++NL + + E+ W +HV DSL
Sbjct: 3 DRDRLLAAFSKDTGITLKPEQIAMIEAYTGLLLDYNQRVNLTAITDREEIWRKHVLDSLL 62
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+F P ID+G+G G PG+I I +E + L+ES+NKK +FL+ V
Sbjct: 63 LFLALEIPPAAKVIDIGTGAGIPGLILKIYRPDLE---MALLESQNKKVAFLKKAVATLG 119
Query: 123 ARGKVFAC------RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+G C I + D+ +R LA ++TL EY P++
Sbjct: 120 LQG--IECLWGRAEDIGRQKNYRESFDLAVSRGLAGMNTLAEYCLPFV 165
>gi|312144697|ref|YP_003996143.1| methyltransferase GidB [Halanaerobium sp. 'sapolanicus']
gi|311905348|gb|ADQ15789.1| methyltransferase GidB [Halanaerobium sp. 'sapolanicus']
Length = 243
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDL 78
S++ LE+L +Y F +KK NL S + E+ +H DSL + L S W+D+
Sbjct: 24 SQQQLEQLWEYYCFFETENKKYNLSSITKAEEVIKKHFLDSLVILNHLDLTGKKS-WLDI 82
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQE 134
G+G GFPG++ + L G L++S KK +FL+ + K +G A + +
Sbjct: 83 GTGAGFPGLVLKLFLP---GDSFYLLDSSAKKINFLKQLSYKLDLQGIRATHGRAEDLAK 139
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
A + D +++RA+A L+ LLEY+ P+L
Sbjct: 140 ADGWRASFDHVTSRAVASLNILLEYTVPFL 169
>gi|187777374|ref|ZP_02993847.1| hypothetical protein CLOSPO_00930 [Clostridium sporogenes ATCC
15579]
gi|187774302|gb|EDU38104.1| hypothetical protein CLOSPO_00930 [Clostridium sporogenes ATCC
15579]
Length = 239
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W+KKINL + E+ +H D +++F+ P ID+G+G GFPGI I
Sbjct: 32 LIQEWNKKINLTAIVKDEEIIKKHFIDCIKIFKASPMAEAKSLIDIGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
IE + L++S K+ +FL V +Q R + +A IQ + D+
Sbjct: 92 KEDIE---ITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQRY----DI 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E+ P++
Sbjct: 145 AVSRAVANLAVLSEFCIPFV 164
>gi|225871173|ref|YP_002747120.1| methyltransferase GidB [Streptococcus equi subsp. equi 4047]
gi|254766903|sp|C0M821|RSMG_STRE4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225700577|emb|CAW95086.1| methyltransferase GidB [Streptococcus equi subsp. equi 4047]
Length = 237
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSI 74
+ ++ E+ + ++ L + W++KINL + + + +++H DS+ L Y P
Sbjct: 15 FALTNHQKEQFDTYFKLLVDWNRKINLTAITEENEVYLKHFYDSVAPL-LQGYIPNEPLR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----AC 130
+D+G+G GFP I I ++ V +I+S NK+ FL+ + ++ G F A
Sbjct: 74 LLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIHFLQLLAKELGLEGVHFYHGRAE 130
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKQFRGQFDLVTARAVARMQILSELTIPFL 164
>gi|25011716|ref|NP_736111.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae NEM316]
gi|77408471|ref|ZP_00785209.1| methyltransferase GidB [Streptococcus agalactiae COH1]
gi|77411914|ref|ZP_00788245.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77414723|ref|ZP_00790853.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|29336669|sp|Q8E3T0|RSMG_STRA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24413256|emb|CAD47335.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159230|gb|EAO70411.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|77162011|gb|EAO72991.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77172913|gb|EAO76044.1| methyltransferase GidB [Streptococcus agalactiae COH1]
Length = 237
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + E+ +++H DS+ + Q + P +D+G+G G
Sbjct: 23 KQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDNSPLSILDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP I I I+ + +I+S NK+ +FL + + G F R ++ Q
Sbjct: 83 FPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDKVFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AKFDIVTARAVARMQVLAELTIPFL 164
>gi|260588825|ref|ZP_05854738.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
gi|260540604|gb|EEX21173.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
Length = 240
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIIT 89
+Y L ++W+K +NL + E+ ++H DSL + + I ID+G+G GFPGI
Sbjct: 30 YYELLIEWNKVMNLTGITDFEEVLLKHFVDSLSIAKGLDMTKISTCIDVGTGAGFPGIPL 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI---TTCDVI 145
I ++ + L++S NK+ +FL V++K G + R ++A + D+
Sbjct: 90 KIAFPHLQ---ITLLDSLNKRLNFLNEVIEKLGLSGIQTVHGRAEDAARKAEHREKYDLS 146
Query: 146 SARALADLDTLLEYSFPWL 164
+RA++ L +L EY P++
Sbjct: 147 VSRAVSRLASLSEYCMPYV 165
>gi|195978770|ref|YP_002124014.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689834|sp|B4U4T4|RSMG_STREM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|195975475|gb|ACG63001.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 237
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSI 74
+ ++ E+ + ++ L + W++KINL + + + +++H DS+ L Y P
Sbjct: 15 FALTNHQKEQFDTYFKLLVDWNRKINLTAITEENEVYLKHFYDSVAPL-LQGYIPNEPLR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----AC 130
+D+G+G GFP I I ++ V +I+S NK+ FL+ + ++ G F A
Sbjct: 74 LLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIHFLQLLAKELGLEGVHFYHGRAE 130
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKQFRGQFDLVTARAVARMQILSELTIPFL 164
>gi|76787171|ref|YP_330246.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae A909]
gi|123601392|sp|Q3JZQ7|RSMG_STRA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76562228|gb|ABA44812.1| glucose-inhibited division protein B [Streptococcus agalactiae
A909]
Length = 237
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + E+ +++H DS+ + Q + P +D+G+G G
Sbjct: 23 KQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDNSPLSILDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP I I I+ + +I+S NK+ +FL + + G F R ++ Q
Sbjct: 83 FPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDRVFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AKFDIVTARAVARMQVLAELTIPFL 164
>gi|307704983|ref|ZP_07641870.1| methyltransferase GidB [Streptococcus mitis SK597]
gi|307621434|gb|EFO00484.1| methyltransferase GidB [Streptococcus mitis SK597]
Length = 237
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + ++ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNENIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|210614310|ref|ZP_03290158.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
gi|210150726|gb|EEA81735.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
Length = 237
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
++ E + + FY L ++W+K +NL + E+ +H DSL + + + ID+
Sbjct: 16 LNDEQKRQFDSFYELLVEWNKVMNLTGITEYEEVNEKHFVDSLSITKAIDMNCVDNLIDI 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFAC 130
G+G GFPGI I ++ V L++S NK+ FL V+++ R + FA
Sbjct: 76 GTGAGFPGIPLKIAFPHLK---VVLLDSLNKRIKFLNTVIEELELIDIETIHGRAEDFAK 132
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + Q D+ +RA+A+L TL EY P+++
Sbjct: 133 QGEYREQF----DLCVSRAVANLSTLSEYCMPYIH 163
>gi|312868207|ref|ZP_07728407.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
gi|311095952|gb|EFQ54196.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
Length = 237
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
E+ E ++ L ++W++KINL + + ++ +++H DS+ + Q + P +D+G+G G
Sbjct: 23 EQYERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIENQPIRLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL + ++ G + R ++ Q
Sbjct: 83 FPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDIVTARAVARMQVLSELTIPYL 164
>gi|119513128|ref|ZP_01632180.1| glucose-inhibited division protein B [Nodularia spumigena CCY9414]
gi|119462225|gb|EAW43210.1| glucose-inhibited division protein B [Nodularia spumigena CCY9414]
Length = 246
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI-----WIDLGSGGGF 84
Y L + ++++NL + +DFW +H+ DSLR Q PS+ ID+G+G GF
Sbjct: 31 LYELIVLGNQQLNLTRITDPQDFWEKHLWDSLRGIAPQGQFIPSLSENASIIDIGTGAGF 90
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFL-RYVVQKTAARGKVFACRIQE---APQMIT 140
PGI +I ++ + L++S KK +F+ + Q T + K R +E PQ
Sbjct: 91 PGIPVAI---TVPNCTITLLDSTRKKINFINETLTQLTLSNAKTLVGRAEEIGHHPQHRK 147
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T D+ RA+++ EY+ P L
Sbjct: 148 TYDIALIRAVSNAAVCAEYTLPLL 171
>gi|322387493|ref|ZP_08061103.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
gi|321142022|gb|EFX37517.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
Length = 245
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWI 76
N++ + + E ++ L ++W++KINL + + E+ +++H DS+ + Q + +
Sbjct: 24 NLTDQQKAQFERYFELLVEWNEKINLTAITEKEEVYLKHFYDSIAPILQGLIENQEIKLL 83
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V +I+S NK+ +FL+ + +K G F A
Sbjct: 84 DIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAEKLDLEGVHFYHGRAEDF 140
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 141 AQDKNFRAQFDIVTARAVARMQVLSELTIPYL 172
>gi|153956501|ref|YP_001397266.1| 16S rRNA methyltransferase GidB [Clostridium kluyveri DSM 555]
gi|219856804|ref|YP_002473926.1| hypothetical protein CKR_3461 [Clostridium kluyveri NBRC 12016]
gi|189039495|sp|A5N449|RSMG_CLOK5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766888|sp|B9DXR9|RSMG_CLOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146349359|gb|EDK35895.1| GidB [Clostridium kluyveri DSM 555]
gi|219570528|dbj|BAH08512.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 237
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
N ++E K + + W+ K+NL + +D +H DS+RVF+ P ID
Sbjct: 17 NFNQEKYNKFIKYKDILKLWNDKMNLTAIVDDKDIIKKHFIDSIRVFKFLPLKDAKSIID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKVFACR 131
+G+G GFPGI I++ E L+ L++S NK+ FL VV T G+ C
Sbjct: 77 VGTGAGFPGI--PIKIIKPEVKLI-LLDSLNKRIKFLNQVVLSIKLNDVTCIHGRAEDC- 132
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ DV+ +RA+A+L L E+ P++
Sbjct: 133 -ARKIEYRENNDVVVSRAVANLTVLSEFCIPYI 164
>gi|153815415|ref|ZP_01968083.1| hypothetical protein RUMTOR_01650 [Ruminococcus torques ATCC 27756]
gi|317500877|ref|ZP_07959089.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
gi|145847274|gb|EDK24192.1| hypothetical protein RUMTOR_01650 [Ruminococcus torques ATCC 27756]
gi|316897757|gb|EFV19816.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
Length = 239
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N++ E+ + +Y + ++W+ +NL + ++ ++H DSL R ++ ++ I
Sbjct: 18 NLTEHQKEQFDRYYEMLVEWNNVMNLTGITDYDEVNLKHFTDSLTLVRNIDMNKIDAV-I 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVF 128
D+G+G GFPG+ I I V L++S NK+ FL V+++ R + +
Sbjct: 77 DIGTGAGFPGLPIKIAFPHIH---VVLLDSLNKRIKFLNAVIEELDLADVETLHGRAEDY 133
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A R + Q D+ +RA+A+L TL EY P++
Sbjct: 134 AKRKEYREQF----DLCVSRAVANLSTLSEYCIPFV 165
>gi|313902792|ref|ZP_07836189.1| methyltransferase GidB [Thermaerobacter subterraneus DSM 13965]
gi|313466912|gb|EFR62429.1| methyltransferase GidB [Thermaerobacter subterraneus DSM 13965]
Length = 246
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPS--IWI 76
+S + L + + L + + + NL + + +RH DSL + + P+ + + +
Sbjct: 20 RLSGDALVAMWRHWQLVREATGRFNLTAVREDAEALVRHYVDSLVLLGIAGPWAAEGLLV 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--ACRIQE 134
DLGSG GFPGI + L GL L+ES+ KKA+FLR V G+V R +E
Sbjct: 80 DLGSGAGFPGIPLLVALGPGWRGL--LLESQGKKAAFLREAVTVLGLDGRVIVEPVRAEE 137
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWL 164
A + + D++ ARA+A L+ L EY P L
Sbjct: 138 AGRRDSWREQADLVVARAVAPLNVLAEYGLPLL 170
>gi|69247496|ref|ZP_00604366.1| Glucose inhibited division protein [Enterococcus faecium DO]
gi|257878638|ref|ZP_05658291.1| glucose inhibited division protein [Enterococcus faecium 1,230,933]
gi|257881304|ref|ZP_05660957.1| glucose inhibited division protein [Enterococcus faecium 1,231,502]
gi|257885579|ref|ZP_05665232.1| glucose inhibited division protein [Enterococcus faecium 1,231,501]
gi|257890521|ref|ZP_05670174.1| glucose inhibited division protein [Enterococcus faecium 1,231,410]
gi|257893097|ref|ZP_05672750.1| glucose inhibited division protein [Enterococcus faecium 1,231,408]
gi|258615278|ref|ZP_05713048.1| 16S rRNA methyltransferase GidB [Enterococcus faecium DO]
gi|289567292|ref|ZP_06447671.1| 16S rRNA methyltransferase GidB [Enterococcus faecium D344SRF]
gi|293563243|ref|ZP_06677695.1| methyltransferase GidB [Enterococcus faecium E1162]
gi|293569167|ref|ZP_06680473.1| methyltransferase GidB [Enterococcus faecium E1071]
gi|294616667|ref|ZP_06696438.1| methyltransferase GidB [Enterococcus faecium E1636]
gi|294619737|ref|ZP_06699142.1| methyltransferase GidB [Enterococcus faecium E1679]
gi|294623751|ref|ZP_06702579.1| methyltransferase GidB [Enterococcus faecium U0317]
gi|68194821|gb|EAN09296.1| Glucose inhibited division protein [Enterococcus faecium DO]
gi|257812866|gb|EEV41624.1| glucose inhibited division protein [Enterococcus faecium 1,230,933]
gi|257816962|gb|EEV44290.1| glucose inhibited division protein [Enterococcus faecium 1,231,502]
gi|257821435|gb|EEV48565.1| glucose inhibited division protein [Enterococcus faecium 1,231,501]
gi|257826881|gb|EEV53507.1| glucose inhibited division protein [Enterococcus faecium 1,231,410]
gi|257829476|gb|EEV56083.1| glucose inhibited division protein [Enterococcus faecium 1,231,408]
gi|289160911|gb|EFD08832.1| 16S rRNA methyltransferase GidB [Enterococcus faecium D344SRF]
gi|291588136|gb|EFF19978.1| methyltransferase GidB [Enterococcus faecium E1071]
gi|291590487|gb|EFF22225.1| methyltransferase GidB [Enterococcus faecium E1636]
gi|291594007|gb|EFF25476.1| methyltransferase GidB [Enterococcus faecium E1679]
gi|291596705|gb|EFF27928.1| methyltransferase GidB [Enterococcus faecium U0317]
gi|291604782|gb|EFF34264.1| methyltransferase GidB [Enterococcus faecium E1162]
Length = 237
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 8/141 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLH-PYPSIWIDLGSGGGFPGIIT 89
+Y ++W++K+NL + + +D +++H DSL + F++ P D+GSG GFP I
Sbjct: 28 YYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAFEVDFTQPLSLCDVGSGAGFPSIPL 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---EAPQMITTCDVIS 146
I ++ + +++S NK+ +FL + + ++ R + + P + D+++
Sbjct: 88 KIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDASLYHDRAETFGQNPHFRASFDLVT 144
Query: 147 ARALADLDTLLEYSFPWLYQK 167
ARA+A L+ L E P Q+
Sbjct: 145 ARAVARLNVLAELCLPLAKQE 165
>gi|293553539|ref|ZP_06674166.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E1039]
gi|291602294|gb|EFF32519.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E1039]
Length = 269
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLH-PYPSIWIDLGSGGG 83
+ + +Y ++W++K+NL + + +D +++H DSL + F++ P D+GSG G
Sbjct: 22 MNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAFEVDFTQPFSLCDVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---EAPQMIT 140
FP I I ++ + +++S NK+ +FL + + ++ R + + P
Sbjct: 82 FPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDASLYHDRAETFGQNPHFRA 138
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
+ D+++ARA+A L+ L E P Q+
Sbjct: 139 SFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|331089221|ref|ZP_08338123.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
gi|330405773|gb|EGG85302.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
Length = 239
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 19/156 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N++ E+ + +Y + ++W+ +NL + ++ ++H DSL R ++ ++ I
Sbjct: 18 NLTEHQKEQFDRYYEMLVEWNNVMNLTGITDYDEVNLKHFTDSLTLVRNIDMNKIDAV-I 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVF 128
D+G+G GFPG+ I I V L++S NK+ FL V+++ R + +
Sbjct: 77 DIGTGAGFPGLPIKIAFPHIH---VVLLDSLNKRIKFLNAVIEELDLADVETLHGRAEDY 133
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A R + Q D+ +RA+A+L TL EY P++
Sbjct: 134 AKRKEYREQF----DLCVSRAVANLSTLSEYCIPFV 165
>gi|326512668|dbj|BAJ99689.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 21/164 (12%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW- 75
+T ++S + ++ + + L W++++NL + + + RHV DSL V L P +
Sbjct: 44 STTSLSPQQQRQVSLYVDVLLDWNQRMNLTTVTDEAEVMTRHVVDSLAV--LPPLERAYT 101
Query: 76 -----------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSG G PG+I ++ S + L+ES K+ +FL + V+
Sbjct: 102 SRGGDISGISLVDVGSGAGLPGLILAVARPSWK---FTLLESMRKRCTFLEHAVEVMGLS 158
Query: 125 GKVFAC-RIQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
C R + A Q + + DV +ARA+A+L L EY P +
Sbjct: 159 NVDVVCDRAENAGQNHDLRESFDVAAARAVAELKILAEYCLPLV 202
>gi|307706750|ref|ZP_07643555.1| methyltransferase GidB [Streptococcus mitis SK321]
gi|307617835|gb|EFN96997.1| methyltransferase GidB [Streptococcus mitis SK321]
Length = 237
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ + Q L P +I +D
Sbjct: 17 LSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ F A +
Sbjct: 77 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDSVHFYHGRAEDLA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAHYDFVTARAVARMQVLSELTIPYL 164
>gi|270308089|ref|YP_003330147.1| methyltransferase [Dehalococcoides sp. VS]
gi|270153981|gb|ACZ61819.1| methyltransferase [Dehalococcoides sp. VS]
Length = 235
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 8/143 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGF 84
LE+ E +Y + ++ ++NL + + +D ++H DS+ + + I D+GSG GF
Sbjct: 20 LEQFETYYRELVDYNSRVNLTAITEYKDVQVKHFLDSVSLVLVGIKGDEKILDVGSGAGF 79
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMIT 140
PG+ I I+ G L+E+ KKA FL + K G ++ + R ++A P
Sbjct: 80 PGLPLKILFPDIQLG---LLEATQKKARFLSEITAKLGLTGVEIISQRAEDAAQNPLYRQ 136
Query: 141 TCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 137 KYTLVTSRAVADMATLAELTLPF 159
>gi|259048139|ref|ZP_05738540.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
gi|259035200|gb|EEW36455.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
Length = 237
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSI 74
++ +S E ++ + ++ L ++W++K+NL + + E +++H DSL + F
Sbjct: 13 IHGITLSDEQKKQFDQYFHLLVEWNEKMNLTAITDEEGVYLKHFYDSLALGFHHELTDQT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ +FL +V+ + + F R +
Sbjct: 73 LCDVGAGAGFPSIPLKIVFPDLK---VTIVDSLNKRITFLNTLVETLGLKDVQCFHDRAE 129
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
Q + DV++ARA+A L L E+ P +
Sbjct: 130 TFGQNKDFRASFDVVTARAVAKLSVLSEFCMPLV 163
>gi|160893420|ref|ZP_02074205.1| hypothetical protein CLOL250_00969 [Clostridium sp. L2-50]
gi|156864815|gb|EDO58246.1| hypothetical protein CLOL250_00969 [Clostridium sp. L2-50]
Length = 240
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+S LE+ + +Y L ++W+K +NL + ED I+H DSL + +L S+ I
Sbjct: 14 ELSDHQLEQFQKYYELLVEWNKVMNLTAIIEKEDVIIKHFADSLLLAKYKKLDESLSV-I 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPGI I ++ V L++S NK+ FL V++ + R ++
Sbjct: 73 DVGTGAGFPGIPLKIAFPGLK---VTLMDSLNKRVKFLNEVIRTLELDDIEAVHSRAEDG 129
Query: 136 PQMIT---TCDVISARALADLDTLLEYSFPWL 164
+ + D+ +RA+A+L +L E+ P++
Sbjct: 130 GRNVQYREKYDLAVSRAVANLSSLSEFCMPFV 161
>gi|331083512|ref|ZP_08332624.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404205|gb|EGG83753.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
Length = 240
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIIT 89
+Y L ++W+K +NL + E+ ++H DSL + + I ID+G+G GFPGI
Sbjct: 30 YYELLVEWNKVMNLTGITDFEEVLLKHFVDSLSIVKGMDMSKISTCIDVGTGAGFPGIPL 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI---TTCDVI 145
I ++ + L++S NK+ +FL V+++ G + R ++A + D+
Sbjct: 90 KIAFPHLQ---ITLLDSLNKRLNFLNEVIEQLGLTGIQTVHGRAEDAARKAEYREKYDLS 146
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+RA++ L +L EY P++ +
Sbjct: 147 VSRAVSRLASLSEYCMPYVKE 167
>gi|317055656|ref|YP_004104123.1| methyltransferase GidB [Ruminococcus albus 7]
gi|315447925|gb|ADU21489.1| methyltransferase GidB [Ruminococcus albus 7]
Length = 236
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
N +S E E+LE + + ++++ +NL + + E ++H DS+ F L P
Sbjct: 13 NGIALSAEQAERLEKYADMLVEYNNMVNLTAITDDEGIAVKHFLDSIYPFTLFDLPEGVS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+G+G GFP + I + L++S NK+ +FL+ + + R +E
Sbjct: 73 MIDVGTGAGFPSCPLKVYRGDIR---LTLLDSLNKRVNFLQSLSDTIGLDAECVHGRAEE 129
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+ +ARA+A+L L EY P++
Sbjct: 130 FGKKDEYRESFDIATARAVANLTDLCEYCLPFV 162
>gi|260558219|ref|ZP_05830415.1| glucose inhibited division protein [Enterococcus faecium C68]
gi|261206909|ref|ZP_05921598.1| glucose inhibited division protein [Enterococcus faecium TC 6]
gi|314940139|ref|ZP_07847319.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a04]
gi|314943030|ref|ZP_07849834.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133C]
gi|314948148|ref|ZP_07851544.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0082]
gi|314953438|ref|ZP_07856356.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133A]
gi|314993823|ref|ZP_07859159.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133B]
gi|314998152|ref|ZP_07863034.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a01]
gi|260075393|gb|EEW63699.1| glucose inhibited division protein [Enterococcus faecium C68]
gi|260078537|gb|EEW66239.1| glucose inhibited division protein [Enterococcus faecium TC 6]
gi|313587864|gb|EFR66709.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a01]
gi|313591714|gb|EFR70559.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133B]
gi|313594541|gb|EFR73386.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133A]
gi|313598230|gb|EFR77075.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133C]
gi|313640644|gb|EFS05224.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a04]
gi|313645402|gb|EFS09982.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0082]
Length = 242
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLH-PYPSIWID 77
++ + + +Y ++W++K+NL + + +D +++H DSL + F++ P D
Sbjct: 21 ELTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLAFEVDFTQPLSLCD 80
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---E 134
+GSG GFP I I ++ + +++S NK+ +FL + + ++ R + +
Sbjct: 81 VGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGIDASLYHDRAETFGQ 137
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
P + D+++ARA+A L+ L E P Q+
Sbjct: 138 NPHFRASFDLVTARAVARLNVLAELCLPLAKQE 170
>gi|323486762|ref|ZP_08092081.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323694904|ref|ZP_08109054.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
gi|323399901|gb|EGA92280.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323500994|gb|EGB16906.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
Length = 242
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWI 76
++ +E+ +Y L + W+ INL + + +++ +H DSL + + I
Sbjct: 20 LTERQIEQFYNYYELLIHWNSMINLTAITQLDEVVTKHFVDSLSLKKIIVDIGQKSQSLI 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFAC 130
D+G+G GFPGI I ++ + L++S NK+ FL VV+ TA G+
Sbjct: 80 DVGTGAGFPGIPLKIAFPELK---ITLLDSLNKRVKFLNEVVETLQLDNITAVHGRAEDY 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ T D+ +RA+A+L TL EY P++
Sbjct: 137 GRDNVSR--ETFDICVSRAVANLSTLAEYCMPFV 168
>gi|255994563|ref|ZP_05427698.1| 16S rRNA methyltransferase GidB [Eubacterium saphenum ATCC 49989]
gi|255993276|gb|EEU03365.1| 16S rRNA methyltransferase GidB [Eubacterium saphenum ATCC 49989]
Length = 239
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGFP 85
E L + LK ++KINL + E+ ++H+ DSL V + I DLG+GGGFP
Sbjct: 26 EILANYLLELLKINEKINLTAVRDPEEAAVKHIVDSLVVEKAFGIEDRRILDLGTGGGFP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA---PQMITT 141
G+ ++ E V L++SK KK + + VV F R +EA ++ +
Sbjct: 86 GVPLAVACGGRE---VVLLDSKKKKLNVIEAVVDNLGIDNVSFLPQRAEEASKEERLRES 142
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV ARA+A+L LLE + P + K
Sbjct: 143 FDVCVARAVAELRVLLEIAVPLVKLK 168
>gi|88807344|ref|ZP_01122856.1| putative glucose inhibited division protein B [Synechococcus sp. WH
7805]
gi|88788558|gb|EAR19713.1| putative glucose inhibited division protein B [Synechococcus sp. WH
7805]
Length = 254
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSIW 75
+V RE L L+ L W+ ++NL EDFWI V DSL + P
Sbjct: 24 SVQREQLITLQQ---LLRDWNSRVNLTRLIEGEDFWIAQVLDSLWPLKAELDTANKPRRC 80
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVFACRIQ 133
ID+G+GGGFPG+ +I L E V L++S +K + + + + A R V R++
Sbjct: 81 IDVGTGGGFPGLAVAIALPGAE---VTLVDSVGRKTAAVAAMARSLGMAERVSVRTERVE 137
Query: 134 EAPQMITTC----DVISARALADLDTLLEYSFPWLY 165
Q TC D+ ARA+A + EY P L+
Sbjct: 138 RTGQ-DPTCRGRFDLAMARAVASAPVVAEYLVPLLH 172
>gi|125974848|ref|YP_001038758.1| methyltransferase GidB [Clostridium thermocellum ATCC 27405]
gi|256003895|ref|ZP_05428882.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281418697|ref|ZP_06249716.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|189039498|sp|A3DHY6|RSMG_CLOTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125715073|gb|ABN53565.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium thermocellum ATCC
27405]
gi|255992233|gb|EEU02328.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281407781|gb|EFB38040.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|316941970|gb|ADU76004.1| methyltransferase GidB [Clostridium thermocellum DSM 1313]
Length = 242
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
N+ E ++K + + +W++K+NL + E+ ++H DS+ + + ++ ID+
Sbjct: 22 NLDDEQIDKFFAYKDVLKEWNQKMNLTAIEDDEEIILKHFIDSISICPIIKDKNLALIDV 81
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
G+G GFPGI I ++ V L++S K+ FL V+++ + R +E
Sbjct: 82 GTGAGFPGIPVKIVFPELK---VKLLDSLEKRTKFLNEVIERLDLKDISTVHARAEEKGV 138
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWL 164
P D+ ARA+A L LLEY P++
Sbjct: 139 DPDYREKYDISVARAVASLPVLLEYCLPFV 168
>gi|332518948|ref|ZP_08395415.1| methyltransferase GidB [Lacinutrix algicola 5H-3-7-4]
gi|332044796|gb|EGI80989.1| methyltransferase GidB [Lacinutrix algicola 5H-3-7-4]
Length = 209
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
N++ + ++K E L+ W+ KIN+VS +++ ++RHV SL + ++ + S +D
Sbjct: 10 NLTEDQIDKFEKLSHLYQDWNLKINVVSRKDIDELYMRHVLHSLAIAKVIEFKDGSDIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I +L++S KK + V Q K R++E
Sbjct: 70 VGTGGGFPGIPLAILFPECN---FHLVDSIAKKLKVVNEVAQGLGLENVKTTHTRVEEIK 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ T D I +RA+A + T + +
Sbjct: 127 E---TYDFIVSRAVAAMPTFVHW 146
>gi|332983461|ref|YP_004464902.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
gi|332701139|gb|AEE98080.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
Length = 240
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 23/153 (15%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGS 80
E +++ + + ++W++ INL S + I+H DSL + + P I ID+G+
Sbjct: 22 EAIDRFMAYKDMLIEWNEHINLTSITDDMGIVIKHFIDSLLCYSTGVIRPDARI-IDIGT 80
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACR- 131
G GFPG+ I S++ V L++S KK +FL V++ + R + +AC+
Sbjct: 81 GAGFPGLALKIAFPSLK---VCLMDSVQKKLNFLDNVIKALSLEDVELIWGRAEDYACKK 137
Query: 132 -IQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+EA DV++ARA+A L L EY P+
Sbjct: 138 GYREA------FDVVTARAVASLLVLAEYCLPF 164
>gi|255659829|ref|ZP_05405238.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
gi|260847904|gb|EEX67911.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
Length = 237
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---- 75
+S L + +Y L ++W++K+NL + + + ++H+ DSL + P+++
Sbjct: 16 TLSENQLAQFTRYYELLVEWNEKMNLTAITEEHEVAVKHMVDSLSAYD----PALFDGEI 71
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFPG+ I + + L++S NK+ +FL+ VV + R
Sbjct: 72 SIIDVGTGAGFPGLPLKIFCPQVH---LTLMDSLNKRVNFLQTVVDELGLEDVDCVHARA 128
Query: 133 QEAPQMI---TTCDVISARALADLDTLLEYSFPWL 164
+E +M D+ +RA+A L L EY P++
Sbjct: 129 EEGARMKKYREQYDLAVSRAVARLPILCEYCLPFV 163
>gi|116627232|ref|YP_819851.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMD-9]
gi|122268165|sp|Q03MB7|RSMG_STRTD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116100509|gb|ABJ65655.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus thermophilus
LMD-9]
Length = 237
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLH-PYPSI-W 75
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL V Q H SI
Sbjct: 15 FDLSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLAPVLQGHIKNQSIQL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
+D+G+G GFP + I +++ V +I+S N++ +FL ++ + G F A
Sbjct: 75 LDIGAGAGFPSLPIKILCPNLD---VTIIDSLNRRITFLNFLSDELGLSGVHFYHGRAED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 132 FGQDKAFRAQFDIVTARAVARMQVLSELTIPFL 164
>gi|254520704|ref|ZP_05132760.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
gi|226914453|gb|EEH99654.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
Length = 239
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
+S E+ + L +W++KINL + + E+ +H D ++ F+ + ID+
Sbjct: 18 LSEHQYEQFIKYMRLLQEWNEKINLTAITEDEEVIKKHFIDCIKAFKSDAIKNAKTIIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEA-- 135
G+G GFPG+ +I +++ + L++S NK+ +FL V+ + + R ++
Sbjct: 78 GTGAGFPGLPIAIMNPNVQ---ITLLDSLNKRINFLNTVINNIGLKNVITIHSRAEDGAR 134
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWL 164
P++ DV ++RA+A++ L E+ P++
Sbjct: 135 KPELREKFDVATSRAVANMAVLSEFCMPYI 164
>gi|319788431|ref|YP_004147906.1| methyltransferase GidB [Pseudoxanthomonas suwonensis 11-1]
gi|317466943|gb|ADV28675.1| methyltransferase GidB [Pseudoxanthomonas suwonensis 11-1]
Length = 212
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
+W++ NL + E+ RH+ DSL +HPY P DLG+G G PGI +I
Sbjct: 39 RWNRTYNLTAIRDPEEMVTRHLLDSL---AMHPYVRPGALADLGTGPGLPGIPLAIARPD 95
Query: 96 IEGGLVNLIESKNKKASFLRYVV-QKTAARGKVFACRIQEAPQMITTCDVISARALADLD 154
++ V L+ES KKA FLR V Q +V R + + I+ARAL L
Sbjct: 96 VQ---VTLVESNGKKARFLREAVRQLKLGNARVLESRAEAVAEPGAYAQ-ITARALDTLA 151
Query: 155 TLLEYS 160
+LE
Sbjct: 152 GILEVG 157
>gi|125623940|ref|YP_001032423.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
cremoris MG1363]
gi|166224595|sp|A2RK93|RSMG_LACLM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|124492748|emb|CAL97703.1| glucose-inhibited division protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070714|gb|ADJ60114.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 238
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWID 77
+S + +E+ E ++ L ++W++KINL + + + +++H DS+ + P +D
Sbjct: 17 LSDKQIEQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVAPILYGLITDQPVSILD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFP + I +E V +I+S NK+ +FL + ++ + R ++
Sbjct: 77 IGAGAGFPSLPMKIIFPELE---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFG 133
Query: 137 Q---MITTCDVISARALADLDTLLEYSFPWL 164
Q T D ++ARA+A L L E++ P+L
Sbjct: 134 QDSNYRATFDFVTARAVARLSVLSEFTIPFL 164
>gi|15674490|ref|NP_268664.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes M1 GAS]
gi|71910092|ref|YP_281642.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS5005]
gi|20177901|sp|Q9A1D7|RSMG_STRP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13621590|gb|AAK33385.1| putative glucose-inhibited division protein [Streptococcus pyogenes
M1 GAS]
gi|71852874|gb|AAZ50897.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS5005]
Length = 237
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPS 73
+ +++S + E+ + ++ ++W+ KINL + + + +++H DS+ + Q L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKSLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFL 164
>gi|306834178|ref|ZP_07467298.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
gi|304423751|gb|EFM26897.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
Length = 244
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + E +++H DS+ V Q + +D+G+G G
Sbjct: 30 KQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVLQGKITNQAICLLDIGAGAG 89
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMI 139
FP I I I+ V +I+S NK+ +FL + + G F A +
Sbjct: 90 FPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLEGVHFYHGRAEDFGQDKHFR 146
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A L L E + P+L
Sbjct: 147 ASYDIVTARAVARLQVLTELTIPFL 171
>gi|299135914|ref|ZP_07029098.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX8]
gi|298602038|gb|EFI58192.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX8]
Length = 220
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-----RVFQLHPYPSIWIDLGSGG 82
+L + L L+W+ K NL + E+ RH +SL +L P ++ +D GSG
Sbjct: 45 RLSQYLDLLLRWNAKTNLTAIREPEEIVRRHFGESLFAARHLASRLAPEAAL-LDFGSGA 103
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GFPG+ + L + V L ES+ KKASFLR V+ +V++ R++ P
Sbjct: 104 GFPGLPIQLLLPELR---VTLAESQGKKASFLREAVRTLGLATEVWSARVESMPAE-RRF 159
Query: 143 DVISARALADLDTLLEYSFP 162
D ++ RA+ + L + P
Sbjct: 160 DAVTLRAVDHMQEALAAARP 179
>gi|288906021|ref|YP_003431243.1| Methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|306832061|ref|ZP_07465215.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732747|emb|CBI14321.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|304425500|gb|EFM28618.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 237
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + E +++H DS+ V Q + +D+G+G G
Sbjct: 23 KQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVLQGKITNQAIRLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMI 139
FP I I I+ V +I+S NK+ +FL + + +G F A +
Sbjct: 83 FPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLKGVHFYHGRAEDFGQDKHFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A L L E + P+L
Sbjct: 140 ASYDIVTARAVARLQVLTELTIPFL 164
>gi|260437681|ref|ZP_05791497.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
gi|292809907|gb|EFF69112.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
Length = 237
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
++++ + KL +Y L ++ +K +NL + + +D I+H DSL + + + ID+
Sbjct: 16 LNQDKINKLINYYELLIEKNKVMNLTAITEYKDVVIKHFADSLSIIKAVNMSEVTNIIDI 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-AP 136
G+G GFPG++ I ++ + L++S NK+ +FL V+ + + R ++ A
Sbjct: 76 GTGAGFPGMVLKIVFPDVK---ITLLDSLNKRVNFLNEVITELQLKDINAIHGRAEDYAH 132
Query: 137 QMI--TTCDVISARALADLDTLLEYSFPWL 164
I D+ +RA+A+L TL EY P++
Sbjct: 133 NDIYREKYDLCVSRAVANLSTLSEYCIPYV 162
>gi|257067214|ref|YP_003153470.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
gi|256799094|gb|ACV29749.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
Length = 210
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
L+ + NL + + + +H +DSL V +D+G+G GFPGI I+
Sbjct: 12 LLEVNSHTNLTAITDPSEIETKHFKDSLTVLDYIKEGDRVLDIGAGAGFPGIPLRIE-KD 70
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE-APQMITTCDVISARALADL 153
I+ + LI+S NKK F+ V++K + + R ++ A + T DV+ +RA+A++
Sbjct: 71 ID---LTLIDSVNKKVKFMNEVIEKLGLTKARAIHTRAEDFAKEERETYDVVVSRAVANM 127
Query: 154 DTLLEYSFPWL 164
TL EY P L
Sbjct: 128 ATLSEYCLPML 138
>gi|320547408|ref|ZP_08041696.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
gi|320447953|gb|EFW88708.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
Length = 237
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIW 75
+++S ++ E ++ L ++W++KINL + + E +++H DS+ V Q +
Sbjct: 15 FDLSDTQKKQFERYFELLVEWNQKINLTAITDKEGVYLKHFYDSIAPVLQGKITNQEIRL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+G GFP I I I+ V +I+S NK+ +FL + ++ G + R ++
Sbjct: 75 LDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLAEELGLDGVHFYHGRAED 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWL 164
Q + D+++ARA+A L L E + P+L
Sbjct: 132 YGQDKVFRASYDIVTARAVARLQVLTELTIPFL 164
>gi|319745619|gb|EFV97920.1| glucose inhibited division protein B [Streptococcus agalactiae ATCC
13813]
Length = 237
Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + E +++H DS+ + Q + P +D+G+G G
Sbjct: 23 KQFETYFRLLVEWNEKINLTAITDKEGVYLKHFYDSIAPILQGYIDNSPLSILDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP I I I+ + +I+S NK+ +FL + + G F R ++ Q
Sbjct: 83 FPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDKVFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AKFDIVTARAVARMQVLAELTIPFL 164
>gi|307265445|ref|ZP_07547001.1| methyltransferase GidB [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919559|gb|EFN49777.1| methyltransferase GidB [Thermoanaerobacter wiegelii Rt8.B1]
Length = 240
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGG 83
+E + +Y L L+W++K+NL + + + I+H+ DSL V + ID+G+G G
Sbjct: 25 VEHFQKYYALLLEWNQKMNLTAITEESEVVIKHLLDSLSVVKSGKIKGEEKIIDVGTGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT-- 140
FP I I ++ L++S K+ +FL V+ K ++ R ++ + I
Sbjct: 85 FPSIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIGKDIKYR 141
Query: 141 -TCDVISARALADLDTLLEYSFPWL 164
D+ ARA+A L+ LLEY+ P++
Sbjct: 142 EQFDLSVARAVAPLNVLLEYTLPFV 166
>gi|326202764|ref|ZP_08192631.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
gi|325986841|gb|EGD47670.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
Length = 241
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
+S +E+ E + L +W+KKINL + + I+H DS+ + I ID+G
Sbjct: 22 ISDTQIEQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPHIGNEDIKIIDVG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQ 133
+G GFPGI I + L++S +K+ FL V+ K +A G+ A
Sbjct: 82 TGAGFPGIPLKIVNPK---NKITLLDSLDKRVKFLNEVINKVNITQISAIHGR--AEDFG 136
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
P D+ ARA+++L LLEY P++
Sbjct: 137 TNPVYREKYDIAVARAVSNLPVLLEYCLPFI 167
>gi|297733841|emb|CBI15088.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---------- 76
+++ + L+W++K+NL + + ++ RHV DSL + + P S +I
Sbjct: 62 QQISLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAM--IPPIQSSYIAHCDSSCNNI 119
Query: 77 ---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRI 132
D+GSG G PG+I +I S + + L+ES NK+ FL + V T + +V R
Sbjct: 120 SLVDVGSGPGLPGLILAIACPSWK---ITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRA 176
Query: 133 QEAPQMI---TTCDVISARALADLDTLLEYSFPWL 164
+ Q I DV ARA+A++ L EY P +
Sbjct: 177 ENLGQNIGFREVFDVAVARAVAEMRILAEYCLPLV 211
>gi|307703679|ref|ZP_07640620.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|307622514|gb|EFO01510.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 237
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 15 LLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHP 70
LL +N+ S + + E ++ L ++W++KINL + + E+ +++H DS+ + Q L
Sbjct: 9 LLAEHNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIS 68
Query: 71 YPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+I +D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F
Sbjct: 69 NETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLEGVHFY 125
Query: 129 ---ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + DV++ARA+A + L E + P+L
Sbjct: 126 HGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYL 164
>gi|307708827|ref|ZP_07645289.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
gi|307615193|gb|EFN94404.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
Length = 237
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + ++ E ++ L ++W++KINL + + ++ +++H DS+ + Q L P +I +D
Sbjct: 17 LSDQQKKQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIPNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|218263050|ref|ZP_03477295.1| hypothetical protein PRABACTJOHN_02976 [Parabacteroides johnsonii
DSM 18315]
gi|218222983|gb|EEC95633.1| hypothetical protein PRABACTJOHN_02976 [Parabacteroides johnsonii
DSM 18315]
Length = 223
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGFP 85
+++ + L+ W+ KIN++S +E+ ++ HV SL + ++ + S +D+G+GGGFP
Sbjct: 35 QIDALFDLYSDWNSKINVISRKDIENLYLHHVLHSLGILKMLKFKEGSTVMDIGTGGGFP 94
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCDV 144
GI +I L + +L++S KK + V + + F CR +E Q+ D
Sbjct: 95 GIPLAILLPEVR---FHLVDSIGKKIKVGQAVAEAIGLKNVTFRHCRAEEEKQLF---DF 148
Query: 145 ISARA---LADL 153
+ +RA LADL
Sbjct: 149 VVSRAVMPLADL 160
>gi|168183719|ref|ZP_02618383.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|237797098|ref|YP_002864650.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
gi|259495491|sp|C3KWJ3|RSMG_CLOB6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|182673204|gb|EDT85165.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|229261829|gb|ACQ52862.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
Length = 239
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W+KKINL + E+ +H D +++F+ P ID+G+G GFPGI I
Sbjct: 32 LIQEWNKKINLTAIVEDEEIIKKHFIDCIKIFKSSPIGEAKSLIDIGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
IE + L++S K+ +FL V +Q R + +A IQ + D+
Sbjct: 92 KEDIE---ITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKY----DI 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E+ P++
Sbjct: 145 AVSRAVANLAVLSEFCIPFV 164
>gi|302672306|ref|YP_003832266.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
gi|302396779|gb|ADL35684.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
Length = 247
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L ++NV S + LE+ + +Y L +KW++ +NL + + +D H DS+ Q +
Sbjct: 13 LKSFNVELSDKQLEQFDKYYELLIKWNEVMNLTAITDFDDVCKLHFVDSISAVQYFDFSD 72
Query: 74 ---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--ARGKVF 128
ID+G+G GFPGI I ++ + L +S NK+ FL V+ G +
Sbjct: 73 KEYSLIDIGTGAGFPGIPLKIVFPNLH---ITLFDSLNKRLKFLDEVIDTLGLNESGSIV 129
Query: 129 ACR--------IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D++ +RA+A++ TL EY P++
Sbjct: 130 TLHGRAEDYSSSKSKDSLRESFDLVVSRAVANMSTLCEYCLPYV 173
>gi|319946423|ref|ZP_08020660.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
gi|319747391|gb|EFV99647.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
Length = 237
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
E+ E ++ L ++W++KINL + + ++ +++H DS+ + Q + P +D+G+G G
Sbjct: 23 EQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIAPILQGLIENKPIRLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL + ++ G + R ++ Q
Sbjct: 83 FPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAEDFAQDKVFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPFL 164
>gi|293365141|ref|ZP_06611858.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|291316591|gb|EFE57027.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 245
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 15 LLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHP 70
LL +N+ S + + E ++ L ++W++KINL + + E+ +++H DS+ + Q L
Sbjct: 17 LLAEHNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIS 76
Query: 71 YPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+I +D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F
Sbjct: 77 NETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLEGVHFY 133
Query: 129 ---ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + DV++ARA+A + L E + P+L
Sbjct: 134 HGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYL 172
>gi|255283804|ref|ZP_05348359.1| 16S rRNA methyltransferase GidB [Bryantella formatexigens DSM
14469]
gi|255265687|gb|EET58892.1| 16S rRNA methyltransferase GidB [Bryantella formatexigens DSM
14469]
Length = 261
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--ID 77
++S++ L + E +Y L +KW+ +NL + + E+ +H DSL + + I +D
Sbjct: 41 DLSQKQLLQFEKYYELLIKWNSLMNLTAITEHEEVLKKHFLDSLSIVKTVDMTKIHTLMD 100
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACR 131
+G+G GFPGI I ++ V L++S K+ FL +V ++ +A G+
Sbjct: 101 VGTGAGFPGIPLKISYPHLK---VVLLDSLGKRVKFLNHVTEELGLEDISAIHGRAEDFA 157
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPW 163
QE + + D+ +RA+A+L +L EY P+
Sbjct: 158 RQEKYR--ESFDLCVSRAVANLSSLSEYCIPY 187
>gi|254977335|ref|ZP_05273807.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-66c26]
gi|255094666|ref|ZP_05324144.1| 16S rRNA methyltransferase GidB [Clostridium difficile CIP 107932]
gi|255316419|ref|ZP_05358002.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-76w55]
gi|255519079|ref|ZP_05386755.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-97b34]
gi|255652262|ref|ZP_05399164.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-37x79]
gi|306521977|ref|ZP_07408324.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-32g58]
Length = 239
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGG 82
LEK + + + ++W+KK+NL ++ +I+H DS+ + + SI ID+G+G
Sbjct: 23 LEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSISAVKNGYIKNGMSI-IDVGTGA 81
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQM 138
GFPGI I L S+E + L++S NK+ +FL V + F A +
Sbjct: 82 GFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNEDY 138
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DV +ARA+A L L+E+ P++
Sbjct: 139 REKYDVATARAVAGLPILMEFCVPFV 164
>gi|78486513|ref|YP_392438.1| methyltransferase GidB [Thiomicrospira crunogena XCL-2]
gi|123554883|sp|Q31DK9|RSMG_THICR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78364799|gb|ABB42764.1| Glucose inhibited division protein B [Thiomicrospira crunogena
XCL-2]
Length = 216
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 16/139 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
KL + L KW+K NL + V++ +I+H+ DSL V PY ID+G+GGG P
Sbjct: 31 KLLDYLALLQKWNKTYNLTAIRDVDEMFIKHILDSLSVA---PYIDSERLIDVGTGGGLP 87
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQEAPQMITT 141
GI +I + V+L++S +KK R++VQ A G +V R+ EA T
Sbjct: 88 GIPLAILFPERQ---VDLLDSNSKKT---RFLVQAKAELGLKNVEVVHHRV-EAYHPETL 140
Query: 142 CDVISARALADLDTLLEYS 160
D + +RA A LD +L ++
Sbjct: 141 YDGVVSRAFASLDDMLNWT 159
>gi|114778890|ref|ZP_01453687.1| hypothetical protein SPV1_12110 [Mariprofundus ferrooxydans PV-1]
gi|114550859|gb|EAU53425.1| hypothetical protein SPV1_12110 [Mariprofundus ferrooxydans PV-1]
Length = 186
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
+++ K +NL S ST ++F R + SL + P +D+GSG G PGI + S +
Sbjct: 14 MRFRKALNLTSISTHDEFVERFILPSLALLDWVPDSGRLLDIGSGMGVPGIPLLLARSGL 73
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
G LV E + K+A FLR++V+ +VF I P + + DV ARA+ D L
Sbjct: 74 HGLLV---ERRKKRAEFLRHIVRTLDLNAEVFDADINHLPSL--SADVCVARAVTDEREL 128
Query: 157 L 157
L
Sbjct: 129 L 129
>gi|255308712|ref|ZP_05352883.1| 16S rRNA methyltransferase GidB [Clostridium difficile ATCC 43255]
Length = 239
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGG 82
LEK + + + ++W+KK+NL ++ +I+H DS+ + + SI ID+G+G
Sbjct: 23 LEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSISAVKNGYIKNGMSI-IDVGTGA 81
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQM 138
GFPGI I L S+E + L++S NK+ +FL V + F A +
Sbjct: 82 GFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNEDY 138
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DV +ARA+A L L+E+ P++
Sbjct: 139 REKYDVATARAVAGLPILMEFCVPFV 164
>gi|260685216|ref|YP_003216501.1| 16S rRNA methyltransferase GidB [Clostridium difficile CD196]
gi|260688875|ref|YP_003220009.1| 16S rRNA methyltransferase GidB [Clostridium difficile R20291]
gi|260211379|emb|CBA67032.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile CD196]
gi|260214892|emb|CBE07696.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile R20291]
Length = 242
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGG 82
LEK + + + ++W+KK+NL ++ +I+H DS+ + + SI ID+G+G
Sbjct: 26 LEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSISAVKNGYIKNGMSI-IDVGTGA 84
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQM 138
GFPGI I L S+E + L++S NK+ +FL V + F A +
Sbjct: 85 GFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNEDY 141
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DV +ARA+A L L+E+ P++
Sbjct: 142 REKYDVATARAVAGLPILMEFCVPFV 167
>gi|86608642|ref|YP_477404.1| 16S rRNA methyltransferase GidB [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123502737|sp|Q2JMA3|RSMG_SYNJB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86557184|gb|ABD02141.1| methyltransferase GidB [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 260
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSIWIDLGSGGGFP 85
Y L + ++ NL + DFW +H+ DSLR +L P ID+G+G GFP
Sbjct: 41 YPLVMAGNRTQNLTRITDPIDFWEKHLWDSLRGLRLLGSWEAIQAQPWRGIDIGTGAGFP 100
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQ---EAPQMITT 141
GI I L L++S +K +F++ ++Q+ + + + A R + + PQ +
Sbjct: 101 GIPAQIALPQTR---FTLLDSTQRKIAFVQDILQRLSLTQARAVAQRAEIWGQDPQERGS 157
Query: 142 CDVISARALADLDTLLEYSFPWL 164
D+ ARALA + EY P L
Sbjct: 158 YDIALARALASAEICAEYCLPLL 180
>gi|302393072|ref|YP_003828892.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
gi|302205149|gb|ADL13827.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
Length = 240
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSS 95
+W++K+NL + E+ I+H DSL + IDLG+G GFPGI I
Sbjct: 35 EWNQKMNLTAIDDSEEIVIKHFLDSLSSVSVMDLAGDEKMIDLGTGAGFPGIPLKIFYPK 94
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCDVISARALA 151
++ + L++S KK +FL+ +V++ +G F A + + + DV+ ARA+A
Sbjct: 95 LD---LTLLDSTKKKITFLKNLVRELNLKGIEFIHGRAEDYGQKSKYRGSYDVVIARAVA 151
Query: 152 DLDTLLEYSFPWL 164
L+ L EY+ P+L
Sbjct: 152 PLNILSEYAIPFL 164
>gi|134301151|ref|YP_001114647.1| methyltransferase GidB [Desulfotomaculum reducens MI-1]
gi|189039383|sp|A4J9R9|RSMG_DESRM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134053851|gb|ABO51822.1| 16S rRNA m(7)G-527 methyltransferase [Desulfotomaculum reducens
MI-1]
Length = 240
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGFPGI 87
E +Y L ++W+K INL + ++ ++H DSL ++ P + +D+G+G GFPGI
Sbjct: 28 EKYYNLLIEWNKNINLTAIIEPKEVALKHFIDSLTCLKILEIPCQANVLDIGTGAGFPGI 87
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI-------T 140
I I V L++S NK+ +FL V++K G C I + +
Sbjct: 88 PIKIFRPDIN---VTLMDSLNKRVNFLNEVIKKL---GLTNICAIHDRAEDFGQKKEHRE 141
Query: 141 TCDVISARALADLDTLLEYSFP 162
D + +RA+A L L EY P
Sbjct: 142 KYDYVLSRAVAKLKVLSEYCLP 163
>gi|333030417|ref|ZP_08458478.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
coprosuis DSM 18011]
gi|332741014|gb|EGJ71496.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
coprosuis DSM 18011]
Length = 206
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N++ E ++ Y L++ W+ KIN++S +E+ + HV SL RV P + +
Sbjct: 10 NLTEEQKKQFAALYDLYIDWNSKINVISRKDIENLYPHHVLHSLGIARVINFKPGTHV-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEA 135
DLG+GGGFPGI +I + +L++S KK + V + F R QE
Sbjct: 69 DLGTGGGFPGIPLAILFPETK---FHLVDSIRKKVRVAQEVATAIGLKNVTFKHARAQEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q D + +RA+ L L++
Sbjct: 126 KQ---EFDFVVSRAVMPLQDLVD 145
>gi|317496585|ref|ZP_07954933.1| glucose inhibited division protein [Gemella moribillum M424]
gi|316913292|gb|EFV34790.1| glucose inhibited division protein [Gemella moribillum M424]
Length = 237
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGI 87
E ++ L ++W++KINL + + E+F+ +H DS+ + Y + D+GSG GFP I
Sbjct: 27 EKYFELVVEWNQKINLTAITEEEEFYTKHFYDSISLSFYRDYSKVSNICDVGSGAGFPSI 86
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ---MITTCD 143
I +E V +++S NK+ FL + ++ F R +E Q + +
Sbjct: 87 PLKILYPHLE---VTIVDSLNKRIKFLNLLQEELGLTNCNFIHARAEEVGQDKNFRESFE 143
Query: 144 VISARALADLDTLLEYSFPWL 164
+++ARA+A L+ L+E P +
Sbjct: 144 IVTARAVARLNVLVELCLPLV 164
>gi|228476624|ref|ZP_04061306.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
gi|228251819|gb|EEK10884.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
Length = 237
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSI--W 75
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL V Q H
Sbjct: 15 FDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQGHIKNQTIRL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL + + G F A
Sbjct: 75 LDIGAGAGFPSLPMKILCPDLD---VTIIDSLNKRINFLNLLADELELSGVHFYHGRAED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 132 FGQDKAFRAQFDIVTARAVARMQVLSELTIPFL 164
>gi|229824650|ref|ZP_04450719.1| hypothetical protein GCWU000282_01997 [Catonella morbi ATCC 51271]
gi|229786021|gb|EEP22135.1| hypothetical protein GCWU000282_01997 [Catonella morbi ATCC 51271]
Length = 240
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 78/153 (50%), Gaps = 14/153 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWID 77
++ + + + E ++ L ++W++K+NL + + E+ +++H D L L Y D
Sbjct: 17 LNDQQIAQFERYFQLLVEWNEKMNLTAITQREEVYLKHFYDCLMALWNMPLDNYALQLCD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC------R 131
+G+G GFP I I ++ V +++S K+ +F+ ++ ++ G +C
Sbjct: 77 VGAGAGFPSIPLKIAHPELQ---VTIVDSLQKRLTFIEHLAEELGLEG--VSCVHGRAED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + P D+++ARA+A L+ L EY P +
Sbjct: 132 VGQNPVYRGQFDLVTARAVASLNVLAEYCLPLV 164
>gi|147679250|ref|YP_001213465.1| S-adenosylmethionine-dependent methyltransferase [Pelotomaculum
thermopropionicum SI]
gi|189039870|sp|A5CY44|RSMG_PELTS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146275347|dbj|BAF61096.1| predicted S-adenosylmethionine-dependent methyltransferase
[Pelotomaculum thermopropionicum SI]
Length = 239
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
++ + + + E +Y L ++ +K +NL + + + ++H DSL + P + +D+
Sbjct: 19 ITEKQVRQFEEYYSLIIERNKSLNLTAITGEREVAVKHFLDSLTCLKAVPLEDGTSLMDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFAC 130
G+G GFPGI I S+ V L+ES KKA FLR + + AR A
Sbjct: 79 GTGAGFPGIPLKICRPSVR---VKLVESAEKKAVFLREAIGRLGLEMAEAIWAR----AE 131
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + P + ARA+A+L L EY P
Sbjct: 132 DVGKDPDHREKYGCVVARAVAELAVLAEYCLP 163
>gi|304405896|ref|ZP_07387554.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
gi|304345139|gb|EFM10975.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
Length = 240
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 83/159 (52%), Gaps = 27/159 (16%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL-- 78
++ E L++ E ++ + ++W++K+NL + E + +H DS+ + S ++D+
Sbjct: 19 LTAEQLDQFEAYFRILVEWNEKMNLTGITEREAVYEKHFYDSVAL-------SFYVDMKN 71
Query: 79 -------GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARG 125
GSG GFP + I ++ + +++S NK+ SFL++VV + + G
Sbjct: 72 VRHIADIGSGAGFPSLPIKICFPHLK---ITIVDSLNKRISFLQHVVNELGLSDVSCVHG 128
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ A I P+ D+++ARA+A L+ L E+ P++
Sbjct: 129 R--AEDIARLPEHRDHYDLVTARAVAKLNVLNEFCLPFV 165
>gi|158321888|ref|YP_001514395.1| methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
gi|166989742|sp|A8MKR7|RSMG_ALKOO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158142087|gb|ABW20399.1| methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
Length = 239
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQ 92
+ L+W++K+NL + +D I+H DSL Q ID+G+G GFPG+ I
Sbjct: 32 ILLEWNQKMNLTAIEEEKDVMIKHFLDSLSCIQSKYLKREGKMIDVGTGAGFPGVPLKIA 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCDVISAR 148
L IE + L++S K+ SFL V +T F A I ++ D +R
Sbjct: 92 LPGIE---LTLLDSLRKRISFLEEVCAETKLGQVDFVHGRAEDIGQSKDYREKYDYAVSR 148
Query: 149 ALADLDTLLEYSFPWL 164
A+A L+ L+EY P++
Sbjct: 149 AVAALNVLVEYCLPFV 164
>gi|304313411|ref|YP_003813009.1| Methyltransferase, glucose inhibited division protein B [gamma
proteobacterium HdN1]
gi|301799144|emb|CBL47387.1| Methyltransferase, glucose inhibited division protein B [gamma
proteobacterium HdN1]
Length = 226
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL F L KW+K NL S E+ +RH+ DSL + P + +D+GSGGG PGI
Sbjct: 43 KLLKFLELLHKWNKAYNLTSVRDPEEMVVRHLLDSLSILPWVKGPKV-LDIGSGGGLPGI 101
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
+I LS + L++S KK FL+ + + ++ R++ Q + D I+
Sbjct: 102 PLAICLSELS---FTLLDSNGKKTRFLQQAATELSLPNLQIVNARVENF-QPAQSFDQIT 157
Query: 147 ARALADLDTLLEYSFPWL 164
+RA + L ++ + P L
Sbjct: 158 SRAFSALTLFMQLATPKL 175
>gi|46579661|ref|YP_010469.1| methyltransferase GidB [Desulfovibrio vulgaris str. Hildenborough]
gi|120602856|ref|YP_967256.1| glucose inhibited division protein [Desulfovibrio vulgaris DP4]
gi|81566895|sp|Q72CN3|RSMG_DESVH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806442|sp|A1VEG3|RSMG_DESVV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46449076|gb|AAS95728.1| methyltransferase GidB [Desulfovibrio vulgaris str. Hildenborough]
gi|120563085|gb|ABM28829.1| 16S rRNA m(7)G-527 methyltransferase [Desulfovibrio vulgaris DP4]
gi|311233459|gb|ADP86313.1| glucose inhibited division protein [Desulfovibrio vulgaris RCH1]
Length = 218
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV------FQLHPYP 72
+ S LE + + L L W++ +NLV + T +D + V DSL + L P P
Sbjct: 21 FEPSPGMLEAIAGYLELLLHWNRSMNLVGTRTWQDTFHTLVVDSLHLAAFLDTLPLPPEP 80
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+W DLG+G G PGI ++ + G ++E++ K+A FLR + + G VF R
Sbjct: 81 EVW-DLGAGAGLPGIPLR---AAWQRGNYTMVEAREKRAMFLRMALARHPLPGTNVFQGR 136
Query: 132 IQEAPQMITTCDVISARALADLDTLLEY 159
+ D++ +RA LL++
Sbjct: 137 AEAFMPSRPPADLVVSRAFMPWRELLDF 164
>gi|325978989|ref|YP_004288705.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178917|emb|CBZ48961.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 244
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + E +++H DS+ V Q + +D+G+G G
Sbjct: 30 KQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVLQGKITNQAIRLLDIGAGAG 89
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMI 139
FP I I I+ V +I+S NK+ +FL + + G F A +
Sbjct: 90 FPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLEGVHFYHGRAEDFGQDKHFR 146
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A L L E + P+L
Sbjct: 147 ASYDIVTARAVARLQVLTELTIPFL 171
>gi|255527594|ref|ZP_05394458.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296186792|ref|ZP_06855193.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
gi|255508727|gb|EET85103.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296048506|gb|EFG87939.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
Length = 239
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLG 79
+ +T K + + W++KINL + E + +H D +++F+ P ID+G
Sbjct: 19 NEDTYNKFSQYKDMIKVWNEKINLTAIVDDEQIFKKHFIDCIKIFKFSPLKQAKNVIDIG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---A 135
+G GFPGI I++ E L+ L++S NK+ +FL VV K + R ++
Sbjct: 79 TGAGFPGI--PIKIMKQELNLI-LLDSLNKRINFLNEVVSKINLNNVETIHGRAEDFSRQ 135
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P+ DV +RA+A+L L E P++
Sbjct: 136 PKYREQVDVAVSRAVANLAVLSELCIPYV 164
>gi|227500995|ref|ZP_03931044.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
gi|227216768|gb|EEI82166.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
Length = 210
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
L+ + NL + + + I+H +DSL V +D+G+G GFPG+ I+
Sbjct: 12 LLEVNAHTNLTAITNPREIEIKHFKDSLTVLSYIKEKDKVLDIGAGAGFPGLPLRIE--- 68
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALADL 153
+ + LI+S NKK F+ V++K + + R ++ A + + DV+ +RA+A++
Sbjct: 69 -KDFDLTLIDSVNKKVVFMNEVIEKLGLKNTRAIHTRAEDYAREKRESFDVVVSRAVANM 127
Query: 154 DTLLEYSFPWL 164
TL EY+ P+L
Sbjct: 128 ATLSEYALPFL 138
>gi|160886034|ref|ZP_02067037.1| hypothetical protein BACOVA_04040 [Bacteroides ovatus ATCC 8483]
gi|237716320|ref|ZP_04546801.1| glucose-inhibited division protein B [Bacteroides sp. D1]
gi|237721001|ref|ZP_04551482.1| glucose-inhibited division protein B [Bacteroides sp. 2_2_4]
gi|262407923|ref|ZP_06084471.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_22]
gi|293373034|ref|ZP_06619403.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CMC 3f]
gi|294646731|ref|ZP_06724354.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CC 2a]
gi|294807740|ref|ZP_06766533.1| 16S rRNA methyltransferase GidB [Bacteroides xylanisolvens SD CC
1b]
gi|299145414|ref|ZP_07038482.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_23]
gi|156108847|gb|EDO10592.1| hypothetical protein BACOVA_04040 [Bacteroides ovatus ATCC 8483]
gi|229443967|gb|EEO49758.1| glucose-inhibited division protein B [Bacteroides sp. D1]
gi|229449836|gb|EEO55627.1| glucose-inhibited division protein B [Bacteroides sp. 2_2_4]
gi|262354731|gb|EEZ03823.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_22]
gi|292632102|gb|EFF50711.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CMC 3f]
gi|292637891|gb|EFF56286.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CC 2a]
gi|294445176|gb|EFG13850.1| 16S rRNA methyltransferase GidB [Bacteroides xylanisolvens SD CC
1b]
gi|298515905|gb|EFI39786.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_23]
Length = 206
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L+ W+ KIN++S +E+ + HV SL +V Q P SI +
Sbjct: 10 DLTEEQRKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKVIQFRPGTSI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I ++ +L++S KK V + F R A
Sbjct: 69 DLGTGGGFPGIPLAILFPEVK---FHLVDSIGKKVRVATEVANAIGLKNVTF--RHARAE 123
Query: 137 QMITTCDVISARALADLDTLLE 158
+ T D + +RA+ L L++
Sbjct: 124 EEKRTFDFVVSRAVMPLADLIK 145
>gi|322517440|ref|ZP_08070313.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
gi|322123922|gb|EFX95481.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
Length = 237
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSI--W 75
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL V Q H
Sbjct: 15 FDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQGHIKNQTIRL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL + + G F A
Sbjct: 75 LDIGAGAGFPSLPMKILCPELD---VTIIDSLNKRINFLNLLADELDLSGVHFYHGRAED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 132 FGQDKAFRAQFDIVTARAVARMQVLSELTIPFL 164
>gi|313683293|ref|YP_004061031.1| 16S rRNA m(7)g-527 methyltransferase [Sulfuricurvum kujiense DSM
16994]
gi|313156153|gb|ADR34831.1| 16S rRNA m(7)G-527 methyltransferase [Sulfuricurvum kujiense DSM
16994]
Length = 192
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 15 LLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
LL YNVS + EK+E + L KW+K NL + T++ + D++ P
Sbjct: 7 LLAQYNVSVNEDFFEKIEQYKTLLEKWNKIHNLTGAKTLQQID-AFIVDAVIPITFLPSV 65
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+D+G+G GFPG+I +I + L+E +K+ASFL++V V A R
Sbjct: 66 KKAMDIGTGAGFPGMILAIAMPQTH---FTLVEPLSKRASFLQFVKADLGLENVDVKALR 122
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPW 163
++ D+I++RA+ D + LL+ S P+
Sbjct: 123 AEQLKS--EPYDLITSRAVTDTEMLLKLSEPF 152
>gi|87198161|ref|YP_495418.1| methyltransferase GidB [Novosphingobium aromaticivorans DSM 12444]
gi|123491126|sp|Q2GC39|RSMG_NOVAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|87133842|gb|ABD24584.1| 16S rRNA m(7)G-527 methyltransferase [Novosphingobium
aromaticivorans DSM 12444]
Length = 230
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+L +V ++ +L + L L +++ NLV+ T+ W+RH+ DS ++ + S
Sbjct: 12 WLREVLHVDDASMSRLAHLVDLLLAENERQNLVARGTLPHVWVRHIVDSAQLLHVSRETS 71
Query: 74 ---IWIDLGSGGGFPG-IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVF 128
W+DLG+G GFPG +I +IQ V L++S+ + +L+ + +V
Sbjct: 72 GSGEWLDLGTGAGFPGLVIAAIQSDRP----VTLVDSRRLRTEWLQRAADALELSNVRVI 127
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R+++ ISARA A LD LL S
Sbjct: 128 LSRVEDLESGAYAA--ISARAFAPLDKLLAIS 157
>gi|297585586|ref|YP_003701366.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
gi|297144043|gb|ADI00801.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
Length = 237
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ E + + + +Y L + W+ ++NL + + ED +++H DS+ + + + +D
Sbjct: 16 ELTDEQMRQFDAYYHLLVDWNTRMNLTAITDKEDVYLKHFYDSITACEFVDFSKATSVVD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFP I I +E V +I+S NK+ +FL + + G + R +EA
Sbjct: 76 VGAGAGFPSIPIKIVFPHLE---VTIIDSLNKRITFLHALSDALSLSGVQAIHSRAEEAG 132
Query: 137 QMI---TTCDVISARALADLDTLLEYSFPWL 164
+M D+ +RA+A + L E P++
Sbjct: 133 RMSEYRDRFDLAISRAVARMPVLTELCMPFV 163
>gi|322374558|ref|ZP_08049072.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
gi|321280058|gb|EFX57097.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
Length = 237
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + + E ++ L ++W++KINL + + E+ +++H DS+ + Q L +I +D
Sbjct: 17 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLISNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ DV++ARA+A + L E + P+L
Sbjct: 134 QDKNFRAQFDVVTARAVARMQVLSELTIPYL 164
>gi|312862573|ref|ZP_07722815.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
gi|311101978|gb|EFQ60179.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
Length = 237
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSI--W 75
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL V Q H
Sbjct: 15 FDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQGHIKNQTIRL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL + + G F A
Sbjct: 75 LDIGAGAGFPSLPMKILCPELD---VTIIDSLNKRINFLNLLADELDLSGVHFYHGRAED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 132 FGQDKAFRAQFDIVTARAVARMQVLSELTIPFL 164
>gi|255102892|ref|ZP_05331869.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-63q42]
Length = 239
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGG 82
LEK + + + + W+KK+NL ++ +I+H DS+ + + SI ID+G+G
Sbjct: 23 LEKFKIYREILVDWNKKMNLTGIEDEKEVYIKHFLDSISAVKNGYIKNGMSI-IDVGTGA 81
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQM 138
GFPGI I L S+E + L++S NK+ +FL V + F A +
Sbjct: 82 GFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVLELDNITFIHGRAEDFGKNEDY 138
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DV +ARA+A L L+E+ P++
Sbjct: 139 REKYDVATARAVAGLPILMEFCVPFV 164
>gi|315612910|ref|ZP_07887821.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
gi|315315020|gb|EFU63061.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
Length = 245
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + + E ++ L ++W++KINL + + E+ +++H DS+ + Q L +I +D
Sbjct: 25 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLISNETIKLLD 84
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 85 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFA 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ DV++ARA+A + L E + P+L
Sbjct: 142 QDKNFRAQFDVVTARAVARMQVLSELTIPYL 172
>gi|88803564|ref|ZP_01119089.1| glucose-inhibited division protein B [Polaribacter irgensii 23-P]
gi|88780576|gb|EAR11756.1| glucose-inhibited division protein B [Polaribacter irgensii 23-P]
Length = 209
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
++S+ +E+ E L+ W+ KIN+VS +++ ++RHV SL + ++ + S +D
Sbjct: 10 DLSQTQIEQFEKLQGLYQDWNLKINVVSRKDIDELYLRHVLHSLAIAKVVQFKAGSKVLD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I + +L++S KK + VV+ + R++E
Sbjct: 70 VGTGGGFPGIPLAILFPETQ---FHLVDSIGKKIKVVDDVVEGLGLENVETTNGRVEE-- 124
Query: 137 QMITTCDVISARALADLDTLLEYS 160
+ T D I +RA+A ++T + ++
Sbjct: 125 -LKDTYDFIVSRAVAQMETFVRWT 147
>gi|75910084|ref|YP_324380.1| 16S rRNA methyltransferase GidB [Anabaena variabilis ATCC 29413]
gi|123608498|sp|Q3M6A1|RSMG_ANAVT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75703809|gb|ABA23485.1| 16S rRNA m(7)G-527 methyltransferase [Anabaena variabilis ATCC
29413]
Length = 245
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-------VFQLHPYPSIWIDLGS 80
+ + Y L L+ ++++NL + ++FW +H+ DSLR + P + ID+G+
Sbjct: 27 RFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISFLPVGASVIDIGT 86
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE---AP 136
G GFPG+ +I + + L++S KK +F+ ++++ K R +E P
Sbjct: 87 GAGFPGVPVAIIAPN---STMTLVDSTRKKIAFIESILKELGLTNAKTLVSRAEEIGQQP 143
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
Q DV RA+ EY+ P L
Sbjct: 144 QHREQYDVALIRAVGTASACAEYTLPLL 171
>gi|148240387|ref|YP_001225774.1| methyltransferase gidB [Synechococcus sp. WH 7803]
gi|166224626|sp|A5GNG2|RSMG_SYNPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147848926|emb|CAK24477.1| Methyltransferase gidB [Synechococcus sp. WH 7803]
Length = 254
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP------YPSIWIDLGS 80
E+L L W+ ++NL EDFW+ V DSL + L P P ID+G+
Sbjct: 28 EQLITLQELLRDWNTRVNLTRLVEGEDFWVTQVLDSL--WPLKPELDTADTPRRCIDVGT 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVFACRIQ---EA 135
GGGFPG+ +I L E + L++S ++K + + + + A R V R++ +
Sbjct: 86 GGGFPGLAVAIALPGAE---LTLVDSVSRKTAAVAAMARSLGMADRVSVRTERVERTGQD 142
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
P+ D+ ARA+A + EY P L+
Sbjct: 143 PRCRGQFDLALARAVASAPVVAEYLVPLLH 172
>gi|301061351|ref|ZP_07202132.1| 16S rRNA methyltransferase GidB [delta proteobacterium NaphS2]
gi|300444546|gb|EFK08530.1| 16S rRNA methyltransferase GidB [delta proteobacterium NaphS2]
Length = 229
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
W++++NL S+ + V DSL P+ + +D+GSGGGFP + I +++
Sbjct: 39 WNRRMNLTGLSSKKRILDELVADSLMPHPFLPHTGVCLDVGSGGGFPAVPLKICRPNLK- 97
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ---MITTCDVISARALADLDT 155
L+E +KK SFL++++++ + + P D+I++RA+A L
Sbjct: 98 --FFLLEPNSKKGSFLKHIIRRCGLKEIAVVRERIDTPSGSLPFKAVDIITSRAMAPLPK 155
Query: 156 LLEYSFPWL 164
L+ + P+L
Sbjct: 156 LINWCTPYL 164
>gi|289579528|ref|YP_003478155.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
gi|289529241|gb|ADD03593.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
Length = 240
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGG 82
+E +Y L L+W+KK+NL + + + I+H DSL V ++ I ID+G+G
Sbjct: 25 VEHFHKYYSLLLEWNKKMNLTAITEESEVVIKHFLDSLSVVKSGKIQGEEKI-IDVGTGA 83
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT- 140
GFP I I ++ L++S K+ +FL V+ K ++ R ++ + I
Sbjct: 84 GFPSIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLDINEIELIHGRAEDIGKDIKY 140
Query: 141 --TCDVISARALADLDTLLEYSFPWL 164
D+ ARA+A L+ LLEY+ P++
Sbjct: 141 REQFDLSVARAVAPLNILLEYTLPFV 166
>gi|17230674|ref|NP_487222.1| 16S rRNA methyltransferase GidB [Nostoc sp. PCC 7120]
gi|20177889|sp|Q8YSA7|RSMG_ANASP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17132277|dbj|BAB74881.1| glucose inhibited division protein B [Nostoc sp. PCC 7120]
Length = 245
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 16/149 (10%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------VFQLHPYPSIWIDLG 79
+ + Y L L+ ++++NL + ++FW +H+ DSLR + L S+ ID+G
Sbjct: 27 RFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISSLQLGASV-IDIG 85
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE---A 135
+G GFPG+ +I S+ + L++S KK +F+ ++ + A K R +E
Sbjct: 86 TGAGFPGVPVAIIASN---STITLVDSTRKKITFIDTILSELALTNAKTLVSRAEEIGQQ 142
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
PQ DV RA+ EY+ P L
Sbjct: 143 PQHREQYDVALIRAVGTASPCAEYTLPLL 171
>gi|295094322|emb|CBK83413.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus sp. ART55/1]
Length = 235
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWID 77
+S + +E+ +Y + ++W+K +NL + + ED I+H DSL + LH + ID
Sbjct: 15 LSDKQIEQFSKYYDILVEWNKVMNLTAITEKEDVIIKHFADSLLLSKYKDLHENIDV-ID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFPGI I + + L++S NK+ FL V+ + + R ++
Sbjct: 74 VGTGAGFPGIPLKIAFPELN---ITLMDSLNKRLKFLDEVIDELGLQDIHTVHSRAEDGG 130
Query: 137 Q---MITTCDVISARALADLDTLLEYSFPWL 164
+ D+ +RA+A+L TL E+ P++
Sbjct: 131 RDEMHREKYDLAVSRAVANLATLSEWCIPFV 161
>gi|171780281|ref|ZP_02921185.1| hypothetical protein STRINF_02069 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281629|gb|EDT47064.1| hypothetical protein STRINF_02069 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 237
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIW 75
++++ ++ E ++ L ++W++KINL + + E +++H DS+ V Q +
Sbjct: 15 FDLTDTQKKQFERYFELLVEWNQKINLTAITDKEGVYLKHFYDSIAPVLQGKITNQDVRL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+G GFP I I +I+ V +I+S NK+ +FL + + G + R ++
Sbjct: 75 LDIGAGAGFPSIPIKILCPAID---VTIIDSLNKRINFLNRLADELGLDGVHFYHGRAED 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWL 164
Q + D+++ARA+A L L E + P+L
Sbjct: 132 YGQDKAFRASYDIVTARAVARLQVLTELTIPFL 164
>gi|313904716|ref|ZP_07838090.1| methyltransferase GidB [Eubacterium cellulosolvens 6]
gi|313470509|gb|EFR65837.1| methyltransferase GidB [Eubacterium cellulosolvens 6]
Length = 240
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIIT 89
+Y + ++W+K +NL + + ++ +H DSL + + + ++ ID+G+G GFPG+
Sbjct: 31 YYEMLVEWNKVMNLTAITEYDEVISKHFVDSLTLARDINFDNVGNLIDVGTGAGFPGLPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMITTCDVI 145
+I ++ V L++S K+ FL V+ + F R +EA + D++
Sbjct: 91 AIAYPNVR---VTLVDSLMKRVKFLNEVIGALGLTNVEAFHSRAEEAGHNRKFRGQYDLV 147
Query: 146 SARALADLDTLLEYSFPW 163
+RA+A+L TLLEY P+
Sbjct: 148 VSRAVANLSTLLEYCTPF 165
>gi|257070286|ref|YP_003156541.1| glucose-inhibited division protein B [Brachybacterium faecium DSM
4810]
gi|256561104|gb|ACU86951.1| glucose-inhibited division protein B [Brachybacterium faecium DSM
4810]
Length = 221
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED-SLRVFQLHPYPSIWIDLGSGG 82
E LE E F L + L+ V+ W RH+ + +L V + P S D+GSG
Sbjct: 18 ERLELAERFVALLADQGPERGLIGPREVDRLWERHLLNCALMVDAIDPSASTLADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
G PG++ +I ++ V LIE+ ++ ++L V + +V R +E +
Sbjct: 78 GLPGVVIAIARPDLQ---VTLIETMQRRTTWLEEVDAELGLGIEVVRARAEEL-HGHRSF 133
Query: 143 DVISARALADLDTLLEYSFP 162
+V++ARA+A LD L ++ P
Sbjct: 134 EVVTARAVAALDKLARWTLP 153
>gi|153007341|ref|YP_001381666.1| methyltransferase GidB [Anaeromyxobacter sp. Fw109-5]
gi|166224344|sp|A7HIY6|RSMG_ANADF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152030914|gb|ABS28682.1| methyltransferase GidB [Anaeromyxobacter sp. Fw109-5]
Length = 215
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
V+ E L +LE F L W++K+NL + + + +H+ DSL + L +DLGS
Sbjct: 20 VAPEALPRLERFADRLLAWNRKVNLTTITDPAEVAEKHLVDSLLLLPLLDEVRTLLDLGS 79
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QM 138
G G PG+ + ++E V +S KK +F++ V + + FA R + P +
Sbjct: 80 GAGLPGVPLACARPALE---VTCCDSVAKKVAFVKAVAAELDLPVRAFAVRAEGDPEGEK 136
Query: 139 ITTCDVISARALAD 152
+ D + +RAL+D
Sbjct: 137 LPRADAVVSRALSD 150
>gi|326390370|ref|ZP_08211929.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
gi|325993647|gb|EGD52080.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
Length = 240
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGG 83
+E + +Y L L+W++K+NL + + + I+H+ DSL V + ID+G+G G
Sbjct: 25 VEHFQKYYALLLEWNQKMNLTAITEESEVVIKHLLDSLSVVKSGKIKGDEKIIDVGTGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT-- 140
FP I I ++ L+++ K+ +FL V+ K ++ R ++ + I
Sbjct: 85 FPSIPLKIVFPKLKA---TLLDASKKRITFLEEVINKLGINEIELIHGRAEDIGKDIKYR 141
Query: 141 -TCDVISARALADLDTLLEYSFPWL 164
D+ ARA+A L+ LLEY+ P++
Sbjct: 142 EQFDLSVARAVAPLNVLLEYTLPFV 166
>gi|125596647|gb|EAZ36427.1| hypothetical protein OsJ_20757 [Oryza sativa Japonica Group]
Length = 295
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------IDLGSGGGFPG 86
L W++++NL + + + RHV DSL V L P + +D+GSG G PG
Sbjct: 79 LLDWNQRMNLTAVTDEGEVMTRHVADSLAV--LPPLERAYRGDLGGMRLVDVGSGAGLPG 136
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC----RIQEAPQMITTC 142
+I ++ S + L+ES K+ FL + V+ C + ++P
Sbjct: 137 LILAVARPSWK---FTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAENVGQSPDFREAF 193
Query: 143 DVISARALADLDTLLEYSFPWL 164
DV ARA+A+L L EY P +
Sbjct: 194 DVAVARAVAELKVLAEYCLPLV 215
>gi|227498806|ref|ZP_03928946.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
gi|226904258|gb|EEH90176.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
Length = 239
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DL 78
+S E L + E + L+ ++ +NL + + E+ ++H+ DSL ++ + + I D+
Sbjct: 14 TLSDEALRRFEIYKDELLETNRFLNLTAITDPEEVAVKHMVDSLTIYNEKRFHNRTIADV 73
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEA-- 135
G+G GFPG+ I ++ + LI+S K+ +FL V + + + R +EA
Sbjct: 74 GTGAGFPGLPLKIYDPTMR---LTLIDSLAKRLAFLEKVAKDMGLGQIRCHHARAEEAGR 130
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWL 164
P++ DV+ ARA+A + L EY P +
Sbjct: 131 DPKLREKFDVVVARAVAPMPVLAEYCLPLV 160
>gi|326804298|ref|YP_004322116.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651693|gb|AEA01876.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 239
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHP--YPSIWIDLGSGG 82
+++ E +Y L + W++KINL + + ++ +++H DSL + F L +D+GSG
Sbjct: 22 MQQFESYYQLLVSWNEKINLTAITDRDEVYLKHFYDSLTLAFSLETDLTGKKLVDVGSGA 81
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---M 138
GFP I I ++ V++++S NK+ F+ V ++ G + R ++ Q
Sbjct: 82 GFPSIPLKIAFPQLQ---VSIVDSLNKRIKFIETVTEELGLAGVSAYHDRAEDFGQNKAF 138
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
D+ +ARA+A L L EY P +
Sbjct: 139 RGQFDLATARAVARLSVLSEYCLPLV 164
>gi|260170515|ref|ZP_05756927.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D2]
gi|315918859|ref|ZP_07915099.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D2]
gi|313692734|gb|EFS29569.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D2]
Length = 206
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L+ W+ KIN++S +E+ + HV SL ++ Q P SI +
Sbjct: 10 DLTEEQRKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKIIQFRPGTSI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I ++ +L++S KK V + F R A
Sbjct: 69 DLGTGGGFPGIPLAILFPEVK---FHLVDSIGKKVRVATEVANAIGLKNVTF--RHARAE 123
Query: 137 QMITTCDVISARALADLDTLLE 158
+ T D + +RA+ L L++
Sbjct: 124 EEKRTFDFVVSRAVMPLADLIK 145
>gi|302877166|ref|YP_003845799.1| methyltransferase GidB [Clostridium cellulovorans 743B]
gi|307687865|ref|ZP_07630311.1| 16S rRNA methyltransferase GidB [Clostridium cellulovorans 743B]
gi|302580023|gb|ADL54035.1| methyltransferase GidB [Clostridium cellulovorans 743B]
Length = 239
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W++KINL + + E+ +H DS+++F+ P + ID+G+G GFPG+ I
Sbjct: 32 LLKEWNEKINLTAITEDEEIIKKHFIDSIKIFRFSPLSKMNNIIDVGTGAGFPGLPIKIV 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAPQMITTCDV 144
I+ V L++S NK+ +FL V+ + R + F+ + + Q D
Sbjct: 92 NPDIK---VTLLDSLNKRVNFLNTVISELGINNIDAIHGRAEEFSRKEEHRGQF----DG 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E P++
Sbjct: 145 AVSRAVANLTVLSELCIPYV 164
>gi|300087974|ref|YP_003758496.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527707|gb|ADJ26175.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 239
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLGSGGGFP 85
K + ++ ++W+ NL S + E +H DS+ + L +D+GSG GFP
Sbjct: 26 KFQRYFEQLIEWNGYFNLTSITENEQVQTKHFLDSMSLIISGLEFEDKSLLDVGSGAGFP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQ 137
GI I S++ + L+E+ +KK FL +V V+ R +V A P+
Sbjct: 86 GIPLKILFPSLK---LTLLEASSKKCHFLEHVTNILELNEVKVCNERAEVQA----HQPE 138
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D+++ARALA LD L+E P+
Sbjct: 139 FRENFDLVAARALASLDVLVELCLPF 164
>gi|283780179|ref|YP_003370934.1| methyltransferase GidB [Pirellula staleyi DSM 6068]
gi|283438632|gb|ADB17074.1| methyltransferase GidB [Pirellula staleyi DSM 6068]
Length = 255
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N +R ++ + T++KL+ + L +W++KINL + E F R V D++ +
Sbjct: 42 NDTMRDALARHSIQLPDATIDKLDLYCKLLWEWNEKINLTRHTDYERFVSRDVVDTMHLA 101
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+L +D+GSGGG PGI +I ++ + L ++ KK + LR +V+K
Sbjct: 102 KLLRESEEVLDVGSGGGVPGITLAIVRPDLQ---MTLSDNTGKKVNVLRDMVEKLGLECA 158
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R ++ D ++ RA+ LD LL + P+
Sbjct: 159 ALNFRSEDLLDE-NRFDALTIRAVGPLDRLLTWFKPY 194
>gi|189039676|sp|Q3Z8E1|RSMG_DEHE1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 235
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSIWIDLGSGGG 83
LE+ E +Y + ++ ++NL + + ED ++H DS L + + + +D+GSG G
Sbjct: 20 LEQFETYYRELVDYNSRVNLTAITGYEDIQLKHFLDSASLALAGIKGDEKL-LDVGSGAG 78
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMI 139
FPG+ I ++ + L+E+ KKA FL + K G ++ + R ++A P
Sbjct: 79 FPGLPLKIIFPGMK---LGLLEATQKKARFLSEITAKLGLTGVEIISQRAEDAAQNPLYR 135
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 136 QKYTLVTSRAVADMATLAELTLPF 159
>gi|297545650|ref|YP_003677952.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843425|gb|ADH61941.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 240
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGG 83
+E +Y L L+W+KK+NL + + + I+H DSL V + ID+G+G G
Sbjct: 25 VEHFHKYYSLLLEWNKKMNLTAITEESEVVIKHFLDSLSVVKSGKIKGEEKIIDVGTGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT-- 140
FP I I ++ L++S K+ +FL V+ K ++ R ++ + I
Sbjct: 85 FPSIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLDINEIELIHGRAEDIGKDIKYR 141
Query: 141 -TCDVISARALADLDTLLEYSFPWL 164
D+ ARA+A L+ LLEY+ P++
Sbjct: 142 EQFDLSVARAVAPLNILLEYTLPFV 166
>gi|9107033|gb|AAF84737.1|AE004013_3 glucose inhibited division protein [Xylella fastidiosa 9a5c]
Length = 238
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 12 ANYLLNTYNVSRETLEKLEY-----------------FYFLFLKWSKKINLVSSSTVEDF 54
AN +N ++S E LEY + L ++W++ NL + +
Sbjct: 23 ANLPMNDSSLSPEVTADLEYGLDILELDRVYVVPLLAYLTLLIRWNRTYNLTAIRDPREM 82
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+RH+ DSL + Q + DLGSG G PGI +I S++ V L+ES KKA FL
Sbjct: 83 VVRHLLDSLAI-QRYVTVGRLADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFL 138
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
R VV++ + EA T + ++ARAL L+ ++
Sbjct: 139 REVVRQLGLSNVGVSEVRAEALDEALTYEHLTARALDTLNGIV 181
>gi|255691824|ref|ZP_05415499.1| 16S rRNA methyltransferase GidB [Bacteroides finegoldii DSM 17565]
gi|260622545|gb|EEX45416.1| 16S rRNA methyltransferase GidB [Bacteroides finegoldii DSM 17565]
Length = 206
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL +V Q P S+ +
Sbjct: 10 DLTEEQRKQFAALYDLYIDWNSKINVISRKDIENLYEHHVLHSLGIAKVIQFRPGTSV-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 69 DLGTGGGFPGIPLAILFPETQ---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
+M D + +RA+ L L++
Sbjct: 126 KRMF---DFVVSRAVMPLADLIK 145
>gi|57234428|ref|YP_181508.1| methyltransferase GidB [Dehalococcoides ethenogenes 195]
gi|57224876|gb|AAW39933.1| methyltransferase GidB [Dehalococcoides ethenogenes 195]
Length = 253
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSIWIDLGSGGG 83
LE+ E +Y + ++ ++NL + + ED ++H DS L + + + +D+GSG G
Sbjct: 38 LEQFETYYRELVDYNSRVNLTAITGYEDIQLKHFLDSASLALAGIKGDEKL-LDVGSGAG 96
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMI 139
FPG+ I ++ G L+E+ KKA FL + K G ++ + R ++A P
Sbjct: 97 FPGLPLKIIFPGMKLG---LLEATQKKARFLSEITAKLGLTGVEIISQRAEDAAQNPLYR 153
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 154 QKYTLVTSRAVADMATLAELTLPF 177
>gi|269926956|ref|YP_003323579.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
gi|269790616|gb|ACZ42757.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
Length = 251
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 17 NTYNVSRETLE-KLEYFYFL---FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--- 69
+ YN+ E E +LE F L +WS K N+ + + + +H+ DSL V H
Sbjct: 19 SAYNLGIEVEEDQLELFLALADLVNEWSYKYNITAIRSRREILTKHIIDSLSVAIGHWQI 78
Query: 70 ---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
P+ +D+GSG GFP + +I I V +E+ KKASF+ +
Sbjct: 79 NDGKVPANLLDVGSGAGFPSLPIAIAFPDIN---VTALEAIRKKASFIAAASESLGLNVT 135
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
V R + A P + +++ ARA+A + TLLEY P++
Sbjct: 136 VLNQRAEVAAHLPDLREAFELVVARAVAYMPTLLEYCLPFV 176
>gi|260063673|ref|YP_003196753.1| glucose-inhibited division protein B [Robiginitalea biformata
HTCC2501]
gi|88783118|gb|EAR14291.1| glucose-inhibited division protein B [Robiginitalea biformata
HTCC2501]
Length = 212
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWI-DLGSGGGFPGIITSIQ 92
L+ W++KIN+VS +++ ++RHV SL + ++H + P + D+G+GGGFPGI +I
Sbjct: 27 LYADWNRKINVVSRKDIDELYLRHVLHSLGIARVHSFLPGTEVLDVGTGGGFPGIPLAIL 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
++ L+++ KK + V++ + R A M + D + +RA+A
Sbjct: 87 FPQVQ---FTLVDAIGKKIRVVNDVIEGLGLENA--SARQVRAEAMKGSFDFVVSRAVAA 141
Query: 153 LDTLL 157
+ T +
Sbjct: 142 MPTFV 146
>gi|198274749|ref|ZP_03207281.1| hypothetical protein BACPLE_00908 [Bacteroides plebeius DSM 17135]
gi|198272196|gb|EDY96465.1| hypothetical protein BACPLE_00908 [Bacteroides plebeius DSM 17135]
Length = 208
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N+S ++ Y L+ W+ KIN++S + + + HV SL +V Q P ++ +
Sbjct: 10 NLSEVQQQQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVMQFRPETTV-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I LV+ I K K A+ + + + CR +E
Sbjct: 69 DLGTGGGFPGIPLAILFPETHFHLVDSIGKKVKVATEIANAIGLKNVTTR--HCRAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L LL+
Sbjct: 127 QLF---DFVVSRAVMPLTDLLK 145
>gi|210624044|ref|ZP_03294161.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
gi|210153251|gb|EEA84257.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
Length = 241
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGS 80
+TL++ + L +W++K+NL + +I+H DS+ + + SI ID+G+
Sbjct: 23 KTLDRFRMYRELLAEWNRKMNLTGIDDEKGTYIKHFLDSVSAVKGGYIKDGMSI-IDVGT 81
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAP 136
G GFPG+ + L + + V L++S NK+ +FL+ V + F A + P
Sbjct: 82 GAGFPGVPLKVCLENTK---VTLLDSLNKRINFLQEVCNQLELEDVEFIHGRAEDFGKNP 138
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
DV +ARA+A L L+E+ P++
Sbjct: 139 DYREQYDVATARAVAGLPILMEFCVPFI 166
>gi|168181108|ref|ZP_02615772.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
gi|182668128|gb|EDT80107.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
Length = 239
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W+KKINL + ++ +H D +++F+ P ID+G+G GFPGI I
Sbjct: 32 LIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSLIDIGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
IE + L++S K+ +FL V +Q R + +A IQ + D+
Sbjct: 92 KEDIE---ITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKY----DI 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E+ P++
Sbjct: 145 AVSRAVANLAVLSEFCIPFV 164
>gi|320353034|ref|YP_004194373.1| methyltransferase GidB [Desulfobulbus propionicus DSM 2032]
gi|320121536|gb|ADW17082.1| methyltransferase GidB [Desulfobulbus propionicus DSM 2032]
Length = 217
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR-HVEDSL 63
D+ +LR + E +E+L + +KWS+++NL++ T E+ + H DSL
Sbjct: 4 DNRQLLRTGSQRLGIPLGDEAIERLLIYLAQLMKWSRRVNLIARDTPEEQAVELHFLDSL 63
Query: 64 RVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ L P +D+G+G GFPG++ + L L+E + K+ SFLR++++
Sbjct: 64 TLAPLLQEPEAVHLLDVGTGAGFPGLVLACVLPEAR---FTLVEPRQKRVSFLRHLIR 118
>gi|148381578|ref|YP_001256119.1| methyltransferase GidB [Clostridium botulinum A str. ATCC 3502]
gi|153934180|ref|YP_001385955.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|153936099|ref|YP_001389362.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
gi|166224583|sp|A7FPL8|RSMG_CLOB1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224584|sp|A5I814|RSMG_CLOBH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148291062|emb|CAL85199.1| methyltransferase [Clostridium botulinum A str. ATCC 3502]
gi|152930224|gb|ABS35724.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|152932013|gb|ABS37512.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
Length = 239
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W+KKINL + ++ +H D +++F+ P ID+G+G GFPGI I
Sbjct: 32 LIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSLIDIGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
IE + L++S K+ +FL V +Q R + +A IQ + D+
Sbjct: 92 KEDIE---ITLLDSLQKRINFLNTVIGELQLKNIQCLHGRAEDYAQEIQHRQKY----DI 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E+ P++
Sbjct: 145 AVSRAVANLAVLSEFCIPFV 164
>gi|260550090|ref|ZP_05824304.1| ribosomal RNA small subunit methyltransferase G [Acinetobacter sp.
RUH2624]
gi|260406845|gb|EEX00324.1| ribosomal RNA small subunit methyltransferase G [Acinetobacter sp.
RUH2624]
Length = 210
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + + P P +D+G
Sbjct: 18 SLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLP-PGRLLDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI--QEAP 136
+GGG PG+I I L E V L++S KK FL+ + + V R+ Q+
Sbjct: 77 TGGGMPGMI--IALCQPERSCV-LLDSNGKKIRFLKQFIADLKLKNVVAVQTRVENQDTI 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI++RA A L +E + P+L++
Sbjct: 134 DELGQFDVITSRAFASLTDFVEAARPYLHE 163
>gi|226951093|ref|YP_002806184.1| methyltransferase GidB [Clostridium botulinum A2 str. Kyoto]
gi|254766887|sp|C1FP29|RSMG_CLOBJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226842347|gb|ACO85013.1| methyltransferase GidB [Clostridium botulinum A2 str. Kyoto]
Length = 239
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W+KKINL + ++ +H D +++F+ P ID+G+G GFPGI I
Sbjct: 32 LIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSLIDIGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
IE + L++S K+ +FL V +Q R + +A IQ + D+
Sbjct: 92 KEDIE---ITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKY----DI 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E+ P++
Sbjct: 145 AVSRAVANLAVLSEFCIPFV 164
>gi|153938497|ref|YP_001392997.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|170754945|ref|YP_001783276.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|166224585|sp|A7GJN7|RSMG_CLOBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806440|sp|B1IHR7|RSMG_CLOBK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152934393|gb|ABS39891.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|169120157|gb|ACA43993.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|295320972|gb|ADG01350.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
230613]
Length = 239
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W+KKINL + ++ +H D +++F+ P ID+G+G GFPGI I
Sbjct: 32 LIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSLIDIGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
IE + L++S K+ +FL V +Q R + +A IQ + D+
Sbjct: 92 KEDIE---ITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKY----DI 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E+ P++
Sbjct: 145 AVSRAVANLAVLSEFCIPFV 164
>gi|257866242|ref|ZP_05645895.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257873244|ref|ZP_05652897.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257875877|ref|ZP_05655530.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325567658|ref|ZP_08144325.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
gi|257800200|gb|EEV29228.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257807408|gb|EEV36230.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257810043|gb|EEV38863.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325159091|gb|EGC71237.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
Length = 238
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 17/158 (10%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYP-SI 74
N ++ E +EK ++ ++W++K+NL + + + +++H DS+ + F+ P S
Sbjct: 13 NGIVLTEEQMEKFAVYFERLVEWNQKMNLTAITEKSEVYLKHFYDSVSLAFETAFDPQSH 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGK 126
D+GSG GFP I I +E V +++S NK+ +FL+ +V R +
Sbjct: 73 LCDVGSGAGFPSIPLKIVFPELE---VTIVDSLNKRITFLQTLVTDLQLENVHLYHDRAE 129
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
F + PQ D ++ARA+A L+ L E P +
Sbjct: 130 TFG----QNPQFRGQFDYVTARAVARLNVLTELCVPLV 163
>gi|85375439|ref|YP_459501.1| glucose inhibited division protein B [Erythrobacter litoralis
HTCC2594]
gi|122543370|sp|Q2N6I7|RSMG_ERYLH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84788522|gb|ABC64704.1| glucose inhibited division protein B [Erythrobacter litoralis
HTCC2594]
Length = 207
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGSGGGF 84
+E++E +++ NLVS ++ + W RH+ DS ++ + +W+DLGSG GF
Sbjct: 21 MERIEALVAALRSENERQNLVSKGSLGEVWQRHIADSAQLLDHVSRETGLWLDLGSGAGF 80
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ--EAPQMITT 141
PG++ + V L+ES+ K+ +L +V+ V R++ EA +
Sbjct: 81 PGLVVAAMQPEKP---VLLVESRRKRVEWLTDMVKALKLENCDVAGMRLELLEARE---- 133
Query: 142 CDVISARALADLDTLLEYS 160
VISARA A L+ LL S
Sbjct: 134 AGVISARAFAPLEKLLRLS 152
>gi|15616622|ref|NP_244928.1| 16S rRNA methyltransferase GidB [Bacillus halodurans C-125]
gi|11132401|sp|Q9K5M8|RSMG_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|10176685|dbj|BAB07779.1| glucose-inhibited division protein [Bacillus halodurans C-125]
Length = 238
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--I 76
+++S+ L++ E++Y ++W++K+NL + + E +++H DSL + + +
Sbjct: 15 FSLSQAQLDQFEHYYHTLVEWNEKMNLTAITDKEGVYLKHFYDSLTAAFYVDFTKVATVV 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP I I + V +++S K+ FL ++ + +G F A
Sbjct: 75 DVGAGAGFPSIPLKIVFPELR---VTIVDSLKKRIGFLEHLSETLGLKGTAFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + D++ ARA+A L L E P
Sbjct: 132 AQKKEHREQYDLVLARAVARLPVLSELCLP 161
>gi|306825496|ref|ZP_07458836.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432434|gb|EFM35410.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 245
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWID 77
+S + + E ++ L ++W++KINL + + E+ +++H DS+ + Q + +D
Sbjct: 25 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIQNENIKLLD 84
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 85 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELNLDGVHFYHGRAEDFA 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 142 QDKNFRAQFDIVTARAVARMQVLSELTIPYL 172
>gi|167038667|ref|YP_001666245.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320117059|ref|YP_004187218.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|193806452|sp|B0K8H7|RSMG_THEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166857501|gb|ABY95909.1| methyltransferase GidB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930150|gb|ADV80835.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 240
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGG 82
+E + +Y L L+W++K+NL + + + I+H DSL V ++ I ID+G+G
Sbjct: 25 VEHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIKEEEKI-IDVGTGA 83
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI-- 139
GFP I I ++ L++S K+ +FL V+ K ++ R ++ + I
Sbjct: 84 GFPCIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIGKDIKY 140
Query: 140 -TTCDVISARALADLDTLLEYSFPWL 164
D+ ARA+A L+ LLEY+ P++
Sbjct: 141 REQFDLSMARAVAPLNILLEYTLPFV 166
>gi|229829505|ref|ZP_04455574.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
gi|229791936|gb|EEP28050.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
Length = 241
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWID 77
Y +S + +Y + ++W+K++NL + + ++ +H DSL + + +D
Sbjct: 17 YQLSEHQYQSFLTYYDMLIEWNKRMNLTTITEYQEVVSKHFLDSLSISNICSGLEGKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACR 131
LG+G GFPGI I ++ + L++S NK+ FL+ V+ + A G+ A
Sbjct: 77 LGTGAGFPGIPLKIVYPDLK---ITLMDSLNKRIRFLQEVIDRLEFKNIEAIHGR--AEE 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + D + +RA+A++ TL EY P++ +
Sbjct: 132 MSRQKKYRESYDHVVSRAVANISTLSEYCLPFVRE 166
>gi|298484213|ref|ZP_07002378.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D22]
gi|298269626|gb|EFI11222.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D22]
Length = 206
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL + Q P SI +
Sbjct: 10 DLTEEQRKQFAALYDLYIDWNSKINVISRKDIENLYEHHVLHSLGIAKTIQFRPGTSI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I + +L++S KK V + F R A
Sbjct: 69 DLGTGGGFPGIPLAILFPEV---TFHLVDSIGKKVRVATEVANAIGLKNVTF--RHARAE 123
Query: 137 QMITTCDVISARALADLDTLLE 158
+ T D + +RA+ L L++
Sbjct: 124 EEKRTFDFVVSRAVMPLADLIK 145
>gi|291278441|ref|YP_003495276.1| glucose inhibited division protein B [Deferribacter desulfuricans
SSM1]
gi|290753143|dbj|BAI79520.1| glucose inhibited division protein B [Deferribacter desulfuricans
SSM1]
Length = 204
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 10/142 (7%)
Query: 22 SRETL-EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLG 79
S ETL EKL+ FY L + KINL + ++F+I+H DSL +F+ + + +D+G
Sbjct: 13 SDETLIEKLDIFYDL--HKNAKINLTAIKYYDEFYIKHYLDSLYIFKTNKFSFDTLMDIG 70
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGGFPGI ++ + V L+ES +KK +FL+ + + ++ R + +
Sbjct: 71 SGGGFPGIPIALLYPEKK---VYLVESISKKINFLKEAIGVLKIKNVELINDRCENLKGI 127
Query: 139 ITTCDVISARALADLDTLLEYS 160
D+I+AR +A ++ +L+++
Sbjct: 128 --NIDMITARGVASVNKILKWT 147
>gi|167041017|ref|YP_001664002.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300913772|ref|ZP_07131089.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307725542|ref|YP_003905293.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
gi|193806453|sp|B0K5N2|RSMG_THEPX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166855257|gb|ABY93666.1| methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300890457|gb|EFK85602.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307582603|gb|ADN56002.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
Length = 240
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGG 82
+E + +Y L L+W++K+NL + + + I+H DSL V ++ I ID+G+G
Sbjct: 25 VEHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIKEEEKI-IDVGTGA 83
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT- 140
GFP I I ++ L++S K+ +FL V+ K ++ R ++ + I
Sbjct: 84 GFPCIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIGKDIKY 140
Query: 141 --TCDVISARALADLDTLLEYSFPWL 164
D+ ARA+A L+ LLEY+ P++
Sbjct: 141 REQFDLSVARAVAPLNILLEYTLPFV 166
>gi|315644288|ref|ZP_07897458.1| methyltransferase GidB [Paenibacillus vortex V453]
gi|315280663|gb|EFU43952.1| methyltransferase GidB [Paenibacillus vortex V453]
Length = 240
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
+ + L++ E +Y + ++W++K+NL + E + +H DS+ + I D
Sbjct: 18 TIDEKQLQQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSVTLAFYVDMSKIGSMAD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAP 136
+GSG GFPGI I I+ + +++S NK+ +FL++VV + ++ R +E
Sbjct: 78 IGSGAGFPGIPLKICFPHIK---LTIVDSLNKRITFLKFVVDTLGLSSVELIHGRAEEVA 134
Query: 137 QMI---TTCDVISARALADLDTLLEYSFPW 163
+ D+++ARA+A + L E+ P+
Sbjct: 135 RKQGYRDGFDLVTARAVARMAVLNEFCLPF 164
>gi|256751462|ref|ZP_05492340.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
gi|256749681|gb|EEU62707.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
Length = 240
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGG 82
+E + +Y L L+W++K+NL + + + I+H DSL V ++ I ID+G+G
Sbjct: 25 VEHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIKEEEKI-IDVGTGA 83
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT- 140
GFP I I ++ L++S K+ +FL V+ K ++ R ++ + I
Sbjct: 84 GFPCIPLKIVFPKLKA---TLLDSSKKRITFLEEVINKLGINEIELIHGRAEDIGKDIKY 140
Query: 141 --TCDVISARALADLDTLLEYSFPWL 164
D+ ARA+A L+ LLEY+ P++
Sbjct: 141 REQFDLSMARAVAPLNILLEYTLPFV 166
>gi|169334514|ref|ZP_02861707.1| hypothetical protein ANASTE_00917 [Anaerofustis stercorihominis DSM
17244]
gi|169259231|gb|EDS73197.1| hypothetical protein ANASTE_00917 [Anaerofustis stercorihominis DSM
17244]
Length = 236
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EKL F + L+ +KK NL + + ++F +H+ DS + ID+GSG G PG
Sbjct: 24 EKLLKFMEIVLRENKKFNLTAITDEKEFIEKHIIDSAIAVKYIKNEGKLIDIGSGAGMPG 83
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMITTC 142
II I ++ + L++S NK+ ++L +++ + R +E +
Sbjct: 84 IIIKILNDDMD---ILLLDSLNKRVNYLNETIKELELNNIEAIHARAEELSHDKDYRESF 140
Query: 143 DVISARALADLDTLLEYSFPWL 164
D ++ARA+A L+ L EY+ P++
Sbjct: 141 DYVTARAVAKLNVLTEYTTPFI 162
>gi|291529195|emb|CBK94781.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale M104/1]
Length = 237
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWID 77
++ LE+ E +Y + ++ +K +NL + + ++ +H DSL L+ +I ID
Sbjct: 19 LNNSQLEQFELYYDMLIEKNKVMNLTAITDFDEVIEKHFLDSLFLCHTLDLNAEKNI-ID 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACR 131
+G+G GFPGI I ++ + L++S NK+ FL V++ A G+ A
Sbjct: 78 VGTGAGFPGIPLKIAFPQLK---ITLLDSLNKRVGFLNEVIEALELKDIEAVHGR--AED 132
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+ +RA+A+L TL EY P++
Sbjct: 133 FARDKEHRAAYDICVSRAVANLSTLSEYCLPFV 165
>gi|238926046|ref|YP_002939564.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|238877723|gb|ACR77430.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|291526553|emb|CBK92140.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale DSM
17629]
Length = 237
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWID 77
++ LE+ E +Y + ++ +K +NL + + ++ +H DSL L+ +I ID
Sbjct: 19 LNNSQLEQFELYYDMLIEKNKVMNLTAITDFDEVIEKHFLDSLFLCHTLDLNAEKNI-ID 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFA 129
+G+G GFPGI I ++ + L++S NK+ FL V ++ R + FA
Sbjct: 78 VGTGAGFPGIPLKIAFPQLK---ITLLDSLNKRVGFLNEVIEALELKDIEAVHGRAEDFA 134
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R +E D+ +RA+A+L TL EY P++
Sbjct: 135 -RDKEHR---AAYDICVSRAVANLSTLSEYCLPFV 165
>gi|220930842|ref|YP_002507751.1| methyltransferase GidB [Clostridium cellulolyticum H10]
gi|220001170|gb|ACL77771.1| methyltransferase GidB [Clostridium cellulolyticum H10]
Length = 241
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGSGGGF 84
+++ E + L +W+KKINL + + I+H DS+ + ++ ID+G+G GF
Sbjct: 27 IKQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPYVKNENLKIIDIGTGAGF 86
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKVFACRIQEAPQM 138
PGI I V L++S +K+ FL V+ Q +A G+ A P
Sbjct: 87 PGIPLKIVNPQ---NKVTLLDSLDKRVKFLNEVINGINITQISAIHGR--AEDFGTNPVY 141
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
D+ ARA+A+L LLEY P++
Sbjct: 142 REKYDIAVARAVANLPVLLEYCLPFV 167
>gi|297572338|ref|YP_003698112.1| methyltransferase GidB [Arcanobacterium haemolyticum DSM 20595]
gi|296932685|gb|ADH93493.1| methyltransferase GidB [Arcanobacterium haemolyticum DSM 20595]
Length = 216
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S + P + +D+GSG GFPG++ +I + VNL
Sbjct: 44 GLIGPRERDKLWSRHILNSTAIVDFLPQNASLVDVGSGAGFPGLVAAIIRPDL---TVNL 100
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
++S ++ +L YVV + E + + DV +ARA+A L LL ++ P
Sbjct: 101 VDSLGRRTDWLSYVVDDLQLSNVTVHNKRAEEMVGVISADVATARAVAALKKLLPWTMP 159
>gi|238917973|ref|YP_002931490.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
gi|238873333|gb|ACR73043.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
Length = 240
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSI-WIDLGSG 81
E+ + +Y L ++W+ +NL + ++ ++H DSL V + H I ID+G+G
Sbjct: 23 EQFDMYYKLLVEWNSFMNLTGITDYDEVLLKHYVDSL-VLDIEKIGHGKKEISLIDVGTG 81
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ--- 137
GFPG+ I + V L++S NK+ FL V++ G + R ++ +
Sbjct: 82 AGFPGLPLKIAYPQLN---VVLLDSLNKRVKFLNQVIEDLGLTGIETVHSRAEDGGRNKD 138
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ DV +RA+A+L TL+EY+ P++
Sbjct: 139 LREHFDVSVSRAVANLATLVEYNLPFV 165
>gi|219849945|ref|YP_002464378.1| 16S rRNA methyltransferase GidB [Chloroflexus aggregans DSM 9485]
gi|254766886|sp|B8G6Y3|RSMG_CHLAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219544204|gb|ACL25942.1| methyltransferase GidB [Chloroflexus aggregans DSM 9485]
Length = 238
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
W+ + NL + RH+ DSL R +Q P+ ID+GSG GFP + I +
Sbjct: 38 WNDRFNLTAIRDRSAMIRRHLLDSLYLARDWQT--APANLIDIGSGAGFPALPLKIAYPT 95
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCD---VISARALA 151
+ V L+E+ KKA FLR+V++ +V RI+ + + + V++ARA+A
Sbjct: 96 LP---VTLVEATGKKAEFLRHVIECLELTDVRVLHERIETVGRNLAEREQYEVVTARAVA 152
Query: 152 DLDTLLEYSFPWL 164
+L L+EY+ P L
Sbjct: 153 ELRVLVEYALPLL 165
>gi|306829253|ref|ZP_07462443.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
gi|304428339|gb|EFM31429.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
Length = 245
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + + E ++ L ++W++KINL + + E+ +++H DS+ + Q L +I +D
Sbjct: 25 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLISNETIKLLD 84
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 85 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELNLDGVHFYHGRAEDFA 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 142 QDKNFRAQFDMVTARAVARMQVLSELTIPYL 172
>gi|15673325|ref|NP_267499.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
lactis Il1403]
gi|281491888|ref|YP_003353868.1| ribosomal rNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|13878504|sp|Q9CFX1|RSMG_LACLA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|12724325|gb|AAK05441.1|AE006366_10 glucose-inhibited division protein GidB [Lactococcus lactis subsp.
lactis Il1403]
gi|281375599|gb|ADA65105.1| Ribosomal RNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|326406879|gb|ADZ63950.1| glucose inhibited division protein B [Lactococcus lactis subsp.
lactis CV56]
Length = 238
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWID 77
+S + +++ E ++ L ++W++KINL + + + +++H DS+ + P +D
Sbjct: 17 LSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPILYGLITDQPVSILD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFP + I ++ V +I+S NK+ +FL + ++ + R ++
Sbjct: 77 IGAGAGFPSLPMKIIFPELK---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFG 133
Query: 137 QMIT---TCDVISARALADLDTLLEYSFPWL 164
Q T D ++ARA+A L L E++ P+L
Sbjct: 134 QDANYRGTFDFVTARAVARLSVLTEFTIPFL 164
>gi|86134318|ref|ZP_01052900.1| glucose inhibited division protein [Polaribacter sp. MED152]
gi|85821181|gb|EAQ42328.1| glucose inhibited division protein [Polaribacter sp. MED152]
Length = 209
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-P 72
Y + +E KL+ Y W+ KIN+VS +++ ++RHV SL + ++ P+ P
Sbjct: 7 YFTDLTETQKEQFSKLQDLY---KDWNLKINVVSRKDIDELYLRHVLHSLGIAKVMPFKP 63
Query: 73 SIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+GGGFPGI +I + +L++S KK + V +
Sbjct: 64 GAKVMDVGTGGGFPGIPLAILFPETQ---FHLVDSIGKKIKVVNEVAEGLGLENVTTTHG 120
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYS 160
R++E T D I +RA+A ++T + ++
Sbjct: 121 RVEEVED---TYDFIVSRAVAQMETFVRWT 147
>gi|300857409|ref|YP_003782393.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
gi|300437524|gb|ADK17291.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
Length = 237
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSI 96
W+ KINL + ED +H D +++F+ P I ID+G+G GFPGI I I
Sbjct: 36 WNNKINLTTIVEDEDIIKKHFIDCVKIFKFSPLRDISNVIDIGTGAGFPGIPMKIVNPQI 95
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAPQMITTCDVISAR 148
+ V L++S NK+ +FL V+ R + F+ I+ + D +R
Sbjct: 96 K---VVLLDSLNKRINFLNQVISDIELNDIKCIHGRAEDFSKDIEYREKF----DAAVSR 148
Query: 149 ALADLDTLLEYSFPWL 164
A+A+L L E+ P++
Sbjct: 149 AVANLTVLSEFCIPYI 164
>gi|227432682|ref|ZP_03914655.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227351564|gb|EEJ41817.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 239
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIWI 76
++ + + + E +Y L + ++ +NL + + +D +++H DSL V +L S I
Sbjct: 17 LTTQQVRQFERYYELLVATNEHVNLTAITEKKDVYLKHFYDSLTVAMYEQKLKSSESTLI 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR---I 132
D+G+G GFP + I ++ + ++++ K+ +FL+ VV G ++ R I
Sbjct: 77 DIGTGAGFPSLPLKIAFPDLK---ITMVDALKKRVNFLQEVVDTLDLTGVEIVHGRAEDI 133
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ P+ D +ARA+A L EY+ P++
Sbjct: 134 GQNPKYRENFDYATARAVARTSVLAEYTLPFV 165
>gi|296111116|ref|YP_003621497.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
gi|295832647|gb|ADG40528.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
Length = 239
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIW 75
++ + + + E ++ L + ++++NL + + +D +++H DSL V +L
Sbjct: 16 TLTDQQIRQFEQYFNLLVARNEQVNLTAITEKDDVYLKHFYDSLTVLFYEKKLKVPGKTL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVFA 129
ID+G+G GFP + I L ++ + +++S K+ +FL+ VV + G+ A
Sbjct: 76 IDIGTGAGFPSLPLKIVLPDLQ---ITMVDSLQKRVNFLQEVVTELGLSHVEIVHGR--A 130
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I + P+ D +ARA+A L EY+ P++
Sbjct: 131 EDIGQKPKYREQFDYATARAVARTSVLAEYTLPFV 165
>gi|15606707|ref|NP_214087.1| glucose inhibited division protein B [Aquifex aeolicus VF5]
gi|3913740|sp|O67522|RSMG_AQUAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2983927|gb|AAC07476.1| glucose inhibited division protein B [Aquifex aeolicus VF5]
Length = 196
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++R + + + E K + L+W+K NL S E+ RH DS+ V +
Sbjct: 1 MIRELFEKEGFTLDEEQERKFSIYLQELLRWNKVHNLTSIKKPEEIVRRHFIDSVSVVRC 60
Query: 69 HPYPSI------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + D+GSG GFPG+ I L I+ + LIES +KK SFL Y+ K
Sbjct: 61 FERIGLDLRGKHFADVGSGAGFPGVPLKIYLKDIK---LTLIESVSKKCSFLEYLKIKLN 117
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLE 158
+V R ++ + DV+ ARAL + + + E
Sbjct: 118 EDYRVLCTRAEKVEEKF---DVVLARALGEFEEVKE 150
>gi|77747572|ref|NP_299217.2| 16S rRNA methyltransferase GidB [Xylella fastidiosa 9a5c]
gi|23821641|sp|Q9PC50|RSMG_XYLFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + Q +
Sbjct: 15 EYGLDILELDRVYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAI-QRYVTV 73
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ +
Sbjct: 74 GRLADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVR 130
Query: 133 QEAPQMITTCDVISARALADLDTLL 157
EA T + ++ARAL L+ ++
Sbjct: 131 AEALDEALTYEHLTARALDTLNGIV 155
>gi|116617470|ref|YP_817841.1| cell division SAM-dependent methyltransferase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|122272329|sp|Q03ZA4|RSMG_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116096317|gb|ABJ61468.1| 16S rRNA m(7)G-527 methyltransferase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 239
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIWI 76
++ + + + E +Y L + ++ +NL + + +D +++H DSL V +L S I
Sbjct: 17 LTTQQVRQFERYYELLVATNEHVNLTAITEKKDVYLKHFYDSLTVAMYEQKLKSSESTLI 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR---I 132
D+G+G GFP + I ++ + ++++ K+ +FL+ VV G ++ R I
Sbjct: 77 DIGTGAGFPSLPLKIAFPDLK---ITMVDALKKRVNFLQEVVDTLDLTGVEIVHGRAEDI 133
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ P+ D +ARA+A L EY+ P++
Sbjct: 134 GQNPKYRENFDYATARAVARTSVLAEYTLPFV 165
>gi|319651093|ref|ZP_08005227.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
gi|317397263|gb|EFV77967.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
Length = 238
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S + L++ + +Y ++W++K+NL + + ED +++H DS+ F + P D
Sbjct: 17 LSPQQLQQYDTYYSTLVEWNEKMNLTAITEKEDVYLKHFYDSISAAFYFDFN-QPLKVCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I + + +++S NK+ FL ++ +K F A
Sbjct: 76 VGAGAGFPSIPIKIAFPGLH---ITIVDSLNKRIGFLEHLAKKLELDNVRFIHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFP 162
+ + + DV++ARA+A L L E P
Sbjct: 133 QNKEYRESFDVVTARAVARLSVLSELCLP 161
>gi|315650202|ref|ZP_07903277.1| glucose inhibited division protein B [Eubacterium saburreum DSM
3986]
gi|315487559|gb|EFU77867.1| glucose inhibited division protein B [Eubacterium saburreum DSM
3986]
Length = 241
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
Y D + L + +L+T +S E EKL FY + ++ +K +NL S + + + +H DS
Sbjct: 2 YNDMDKYLSESNILDTV-LSDEKKEKLYRFYKILIEKNKVMNLTSITDIRECTYKHFIDS 60
Query: 63 LRVFQL------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ + +L Y DLG+G GFPGI +I ++ ++LI+S NK+ F++
Sbjct: 61 IAIEKLVKDIGEREYS--VADLGTGAGFPGIPLAIAFPNLR---LDLIDSLNKRVKFIQE 115
Query: 117 VVQ----KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V + K A I + + D+ +RA+A+L +L EY P +
Sbjct: 116 VCEALELKNVTSIHSRAENIAKDKKYREKFDICVSRAVANLASLSEYCLPLV 167
>gi|304438031|ref|ZP_07397975.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368985|gb|EFM22666.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 240
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
++ E + + ++ + L W+ ++NL + + ED ++H+ DSL + + ID+
Sbjct: 19 LTAEQIGQFSVYHEMLLDWNTRMNLTALTAPEDVVVKHIIDSLMAYDAARFDGARTLIDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-------KVFACR 131
G+G G PGI ++ + V L++S NK+ FL V TAA G A
Sbjct: 79 GTGAGLPGIPLAVYAPHLT---VTLLDSLNKRVRFLTEV---TAAMGLQNVRCIHARAEE 132
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+ +RA+A L LLEY+ P++
Sbjct: 133 AARTAEHRAAYDIAVSRAVARLPVLLEYTLPFV 165
>gi|261410103|ref|YP_003246344.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
gi|261286566|gb|ACX68537.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
Length = 240
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+ + L + E +Y + ++W++K+NL + E + +H DS+ + I D+
Sbjct: 19 IDEKQLHQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSITLAFYVDMNKIGNLADI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
GSG GFPGI I ++ + +++S NK+ +FL++V G ++ R +E +
Sbjct: 79 GSGAGFPGIPLKICFPHLK---LTIVDSLNKRITFLKHVADTLGLSGIELIHGRAEEVAR 135
Query: 138 MI---TTCDVISARALADLDTLLEYSFPW 163
D+++ARA+A + L E+ P+
Sbjct: 136 KHGYRDGFDLVTARAVARMAVLNEFCLPF 164
>gi|291521112|emb|CBK79405.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus catus GD/7]
Length = 239
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGGGFPGII 88
+Y + ++ +K +NL + ++F +H DSL + +H S ID+G+G GFPGI
Sbjct: 29 YYEMVVEKNKVMNLTGITEFDEFIDKHYIDSLSIVNAVDIHQVQS-AIDVGTGAGFPGIP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAPQMIT 140
I ++ + L++S NK+ +FL VV+ R + F R + Q
Sbjct: 88 LKIAFPHLK---ITLLDSLNKRINFLNEVVETLGLENVETCHGRAEDFGHRKEYREQY-- 142
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ ++RA+A+L TL EY P++
Sbjct: 143 --DLCTSRAVANLSTLSEYCVPFV 164
>gi|73748586|ref|YP_307825.1| 16S rRNA methyltransferase GidB [Dehalococcoides sp. CBDB1]
gi|123619642|sp|Q3ZXE0|RSMG_DEHSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|73660302|emb|CAI82909.1| methyltransferase GidB [Dehalococcoides sp. CBDB1]
Length = 235
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWIDLGSGGGF 84
L + E +Y + ++ +INL + + +D I+H DS+ V +D+GSG GF
Sbjct: 20 LGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVLAGIKGDEKLLDVGSGAGF 79
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMIT 140
PG+ I +I+ G L+E+ KKA FL + K G ++ + R ++ P
Sbjct: 80 PGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLSGVEIISQRAEDTAQNPLYRQ 136
Query: 141 TCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 137 KYSLVTSRAVADMATLAELTLPF 159
>gi|309777476|ref|ZP_07672430.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
gi|308914716|gb|EFP60502.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
Length = 236
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----- 74
+ L++ E + + ++W++K+NL + + +++ + +H DS+ PS
Sbjct: 20 QLHERQLQQFEEYASMLIEWNQKMNLTAITDLDEIYEKHFLDSI-------LPSFDWKLQ 72
Query: 75 --WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-- 130
+ D+G+G GFPGI I +E + ++E+ K+ +FL + +K G AC
Sbjct: 73 GSFCDVGAGAGFPGIPLKIIYPDLE---LTIVETLGKRITFLNALCEKLKLDG--VACVH 127
Query: 131 -RIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ A + + D++SARA+A+L L E P + Q
Sbjct: 128 ARAEDYAKEHRESFDIVSARAVANLPLLSELCIPLVKQ 165
>gi|189039677|sp|A5FR82|RSMG_DEHSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 235
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWIDLGSGGGF 84
L + E +Y + ++ +INL + + +D I+H DS+ V +D+GSG GF
Sbjct: 20 LGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVLAGIKGDEKLLDVGSGAGF 79
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMIT 140
PG+ I +I+ G L+E+ KKA FL + K G ++ + R ++ P
Sbjct: 80 PGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLSGVEIISQRAEDTAQNPLYRQ 136
Query: 141 TCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 137 KYSLVTSRAVADMATLAELTLPF 159
>gi|256820758|ref|YP_003142037.1| methyltransferase GidB [Capnocytophaga ochracea DSM 7271]
gi|256582341|gb|ACU93476.1| methyltransferase GidB [Capnocytophaga ochracea DSM 7271]
Length = 205
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 11/135 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
L+ KW+ +IN++S ++DF+ RHV SL + + + ++ +D+G+GGGFPGI +I
Sbjct: 25 LYEKWNAQINVISRKDIDDFYERHVLHSLAIAKRIQFVDGTVLLDVGTGGGFPGIPLAIM 84
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
+ + L++S KK ++ VV K V A +I+ A ++ T D + +RA+
Sbjct: 85 FPNCQ---FTLVDSIGKKIKVVQEVV-KALRLTNVTAMQIR-AEELKDTYDFVVSRAVTQ 139
Query: 153 LDTLLEYSFPWLYQK 167
+ + PW+ K
Sbjct: 140 MKDFV----PWVKGK 150
>gi|167748065|ref|ZP_02420192.1| hypothetical protein ANACAC_02809 [Anaerostipes caccae DSM 14662]
gi|167652057|gb|EDR96186.1| hypothetical protein ANACAC_02809 [Anaerostipes caccae DSM 14662]
Length = 236
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIWI-DLGSGGG 83
L + E +Y L + +K +NL + + ED ++H DSL + + + S I D+G+G G
Sbjct: 20 LAQFEIYYELLTEKNKVMNLTAITEREDVILKHFVDSLALVKAECGFSSQKILDVGTGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKV--FACRIQEA 135
FPGI I ++ + L++S NK+ FL+ V+ TA G+ +A + +
Sbjct: 80 FPGIPLKIAFPGLK---IVLLDSLNKRVKFLQEVIDALELHDITAVHGRAEDYARQKEYR 136
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
Q D++ +RA+A+L TL EY P++
Sbjct: 137 EQF----DLVVSRAVANLSTLSEYCLPYV 161
>gi|242281174|ref|YP_002993303.1| methyltransferase GidB [Desulfovibrio salexigens DSM 2638]
gi|242124068|gb|ACS81764.1| methyltransferase GidB [Desulfovibrio salexigens DSM 2638]
Length = 228
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----HPYPS 73
+ + + L Y+ L +KW+K +NLV E + + DSL + P
Sbjct: 32 FKAATDQARVLAYYLTLLVKWNKSMNLVGPQGWEQVFHSLIIDSLHLADFLDSLELPSNP 91
Query: 74 IWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACR 131
+ +DLG+G G PG I L ++ + G L+ES+ K+ F+R ++ R VF R
Sbjct: 92 VTLDLGAGAGLPG----IPLRALWQAGDYRLVESREKRCIFMRTALRMMKLPRTDVFQGR 147
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ P D+I ++A LLE+ P L ++
Sbjct: 148 AEKIPSETLPADLILSKAFMPWKELLEFVKPMLAEQ 183
>gi|325922601|ref|ZP_08184352.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas gardneri ATCC
19865]
gi|325546896|gb|EGD17999.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas gardneri ATCC
19865]
Length = 212
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL +HPY DLG+G G PGI
Sbjct: 34 YLTLLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMHPYIASGTLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ A A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAESRAEALDEPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|317472410|ref|ZP_07931735.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
gi|316900130|gb|EFV22119.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
Length = 236
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIWI-DLGSGGG 83
L + E +Y L + +K +NL + + ED ++H DSL + + + S I D+G+G G
Sbjct: 20 LAQFEIYYELLTEKNKVMNLTAITEREDVILKHFVDSLALVKAECGFSSQKILDVGTGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKV--FACRIQEA 135
FPGI I ++ + L++S NK+ FL+ V+ TA G+ +A + +
Sbjct: 80 FPGIPLKIAFPGLK---IVLLDSLNKRVKFLQEVIDALELHDITAVHGRAEDYARQKEYR 136
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
Q D++ +RA+A+L TL EY P++
Sbjct: 137 EQF----DLVVSRAVANLSTLSEYCLPYV 161
>gi|313146687|ref|ZP_07808880.1| glucose-inhibited division protein B [Bacteroides fragilis 3_1_12]
gi|313135454|gb|EFR52814.1| glucose-inhibited division protein B [Bacteroides fragilis 3_1_12]
Length = 206
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL RV + P + +
Sbjct: 10 DLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRFRPGSKV-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 69 DLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q T D + +RA+ L L++
Sbjct: 126 KQ---TFDFVVSRAVMPLADLIK 145
>gi|289432612|ref|YP_003462485.1| methyltransferase GidB [Dehalococcoides sp. GT]
gi|288946332|gb|ADC74029.1| methyltransferase GidB [Dehalococcoides sp. GT]
Length = 256
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 14 YLLNTYNVSRETLE--KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHP 70
Y L+ +S +++ + E +Y + ++ +INL + + +D I+H DS+ V
Sbjct: 27 YGLSALGISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVLAGIK 86
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+D+GSG GFPG+ I +I+ G L+E+ KKA FL + K G ++ +
Sbjct: 87 GDEKLLDVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLSGVEIIS 143
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
R ++ P ++++RA+AD+ TL E + P+
Sbjct: 144 QRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPF 180
>gi|296131539|ref|YP_003638789.1| methyltransferase GidB [Cellulomonas flavigena DSM 20109]
gi|296023354|gb|ADG76590.1| methyltransferase GidB [Cellulomonas flavigena DSM 20109]
Length = 228
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+E F+ ++ + L+ V W RH+ +S V P + +D+GSG G PG++
Sbjct: 35 VETFHAYLVEEGELRGLIGPREVARLWERHMLNSAAVVPFLPDHGVIVDVGSGAGLPGVV 94
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
+ + + V L+E ++ ++L VV++T +V R QE + D ++A
Sbjct: 95 VAAMRPAAQ---VILVEPMERRVAWLEDVVERTRLTNVEVRRARAQELDGAV-EADAVTA 150
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++ P + +
Sbjct: 151 RAVASLDKLYRWTAPLVRE 169
>gi|331092104|ref|ZP_08340935.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402305|gb|EGG81876.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
Length = 237
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
E+ FY + ++W+ +NL + E+ +H DS+ + + + ID+G+G GF
Sbjct: 22 EQFHQFYEILVEWNSFMNLTGITEYEEVNEKHFVDSVSLIKAVDLSKVKTVIDVGTGAGF 81
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMIT 140
PGI I +E + L++S NK+ FL V+++ G + R ++ +
Sbjct: 82 PGIPLKIAFPHLE---IVLLDSLNKRVKFLNEVIEQLGLTGIRAIHGRAEDYAKQKEYRE 138
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A+L TL EY P++
Sbjct: 139 QFDLCVSRAVANLSTLSEYCIPYV 162
>gi|227873160|ref|ZP_03991451.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
gi|227840991|gb|EEJ51330.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
Length = 248
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---SIWI------DLGSGG 82
+Y + ++ +K +NL + + ED ++H D L + Q++ S WI D+G+G
Sbjct: 31 YYQILVEKNKVMNLTAITEEEDVIVKHFVDCLAICQMNVSRETFSEWIEGKSVMDVGTGA 90
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQM 138
GFPG++ I SI+ ++L +S K+ FL +V+ G F A + +
Sbjct: 91 GFPGLVLKIAFPSIQ---LSLSDSLQKRIRFLEELVESLGLEGVKFYHGRAEDLGHDKNL 147
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
D++ +RA+A+L TL EY P++
Sbjct: 148 REQYDLVVSRAVANLATLSEYDLPFV 173
>gi|320451554|ref|YP_004203650.1| 16S rRNA methyltransferase GidB [Thermus scotoductus SA-01]
gi|320151723|gb|ADW23101.1| 16S rRNA methyltransferase GidB [Thermus scotoductus SA-01]
Length = 246
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIIT 89
Y L ++ +++ NL + T E+ ++H DSL + L + W +DLG+G GFPG+
Sbjct: 36 LYDLLMEANRRTNLTALRTEEEVVVKHFLDSLTLLTLPLFQGPWRVLDLGTGAGFPGLPL 95
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCDVI 145
I +E V L+++ KK +F+ V+ +G A + P+ +
Sbjct: 96 KIVRPELE---VTLLDATKKKVAFVAQAVEALGLKGAYPLWGRAEELAHMPEHREAYHRV 152
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+A L L+E P++
Sbjct: 153 VARAVASLCVLVELGLPFV 171
>gi|147669346|ref|YP_001214164.1| methyltransferase GidB [Dehalococcoides sp. BAV1]
gi|146270294|gb|ABQ17286.1| 16S rRNA m(7)G-527 methyltransferase [Dehalococcoides sp. BAV1]
Length = 256
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 14 YLLNTYNVSRETLE--KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHP 70
Y L+ +S +++ + E +Y + ++ +INL + + +D I+H DS+ V
Sbjct: 27 YGLSALGISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVLAGIK 86
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+D+GSG GFPG+ I +I+ G L+E+ KKA FL + K G ++ +
Sbjct: 87 GDEKLLDVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLSGVEIIS 143
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
R ++ P ++++RA+AD+ TL E + P+
Sbjct: 144 QRAEDTAQNPLYRQKYSLVTSRAVADMATLAELTLPF 180
>gi|315223893|ref|ZP_07865740.1| glucose inhibited division protein B [Capnocytophaga ochracea
F0287]
gi|314946145|gb|EFS98147.1| glucose inhibited division protein B [Capnocytophaga ochracea
F0287]
Length = 205
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 11/135 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
L+ KW+ +IN++S ++DF+ RHV SL + + + ++ +D+G+GGGFPGI +I
Sbjct: 25 LYEKWNAQINVISRKDIDDFYERHVLHSLAIAKRIQFVDGTVLLDVGTGGGFPGIPLAIM 84
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
+ + L++S KK ++ VV K V A +I+ A ++ T D + +RA+
Sbjct: 85 FPNCQ---FTLVDSIGKKIKVVQEVV-KALRLTNVTAMQIR-AEELKDTYDFVVSRAVTQ 139
Query: 153 LDTLLEYSFPWLYQK 167
+ + PW+ K
Sbjct: 140 MKDFV----PWVKGK 150
>gi|325983681|ref|YP_004296083.1| methyltransferase GidB [Nitrosomonas sp. AL212]
gi|325533200|gb|ADZ27921.1| methyltransferase GidB [Nitrosomonas sp. AL212]
Length = 224
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 10 LRANYLLNTYNVSRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
LRA L E L K +E + L KW+K NL + V++ +HV DSL V
Sbjct: 11 LRA--LDKVVTAPEEQLAKNIERYLVLIEKWNKVHNLTAIRNVQEMLTQHVMDSLVVLPH 68
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
P + ID+G+G G PGI I L+ + V L+ES KK +FL+ V + + V
Sbjct: 69 IQGPQV-IDVGTGAGLPGI--PIALAKPDWH-VTLVESNQKKIAFLQQVKIELGLKNVDV 124
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A RI++ P D I +RA ++L + + W
Sbjct: 125 AAKRIEDLP-ADKKADTIISRAFSELGEFIALTRQW 159
>gi|319902422|ref|YP_004162150.1| 16S rRNA m(7)G-527 methyltransferase [Bacteroides helcogenes P
36-108]
gi|319417453|gb|ADV44564.1| 16S rRNA m(7)G-527 methyltransferase [Bacteroides helcogenes P
36-108]
Length = 207
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 11/142 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWID 77
++ E ++ Y L+L W+ KIN++S +++ + HV SL +V + P I +D
Sbjct: 11 LTEEQKKQYAALYDLYLDWNSKINVISRKDIDNLYEHHVLHSLGIAQVIRFKPGTRI-MD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I ++ +LI+S KK V + F R +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVQ---FHLIDSIGKKIRVAEEVAGSIGLKNTTFRHARAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q T D + +RA+ L L++
Sbjct: 127 Q---TFDFVVSRAVMPLSDLMK 145
>gi|255657631|ref|ZP_05403040.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-23m63]
gi|296452688|ref|ZP_06894379.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296880060|ref|ZP_06904029.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
gi|296258470|gb|EFH05374.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296428927|gb|EFH14805.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
Length = 239
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 19/150 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGG 82
LEK + + + + W+KK+NL ++ +I+H DS+ + + SI ID+G+G
Sbjct: 23 LEKFKIYREILIDWNKKMNLTGIEDEKEVYIKHFLDSISAVKNGYIKNGMSI-IDVGTGA 81
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFPGI I L +E + L++S NK+ +FL V ++ R + F +
Sbjct: 82 GFPGIPLKICLDRLE---LTLLDSLNKRINFLEEVSRVLELDNIKFIHGRAEDFG----K 134
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
DV +ARA+A L L+E+ P++
Sbjct: 135 NENYREKYDVATARAVAGLPILMEFCVPFV 164
>gi|78776584|ref|YP_392899.1| glucose-inhibited division protein B [Sulfurimonas denitrificans
DSM 1251]
gi|123550792|sp|Q30TL7|RSMG_SULDN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78497124|gb|ABB43664.1| Glucose inhibited division protein [Sulfurimonas denitrificans DSM
1251]
Length = 193
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 13/127 (10%)
Query: 38 KWSKKINLVSS---STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
KW+K NL + +T+++F + D++ P +D+G+G GFPG+I ++ L
Sbjct: 31 KWNKIHNLTGAKDENTIDEF----IYDAIYPITFLPKCKNLLDIGTGAGFPGLILAMGLP 86
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDVISARALADL 153
E V L+E K+ASFL+++ + KV R+Q+ P I +++++RA+ D
Sbjct: 87 ETE---VTLVEPLAKRASFLQFIKADLGLSNVKVVQKRVQDMPSEI--FEIVTSRAVIDT 141
Query: 154 DTLLEYS 160
+ LLE S
Sbjct: 142 NMLLELS 148
>gi|160882057|ref|YP_001561025.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
gi|189039497|sp|A9KLX7|RSMG_CLOPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160430723|gb|ABX44286.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
Length = 242
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWID 77
++++ LE+ E +Y L ++W+ +NL + + E+ +H DSL + + + + +D
Sbjct: 17 DLNKHQLEQFEIYYDLLIEWNSFMNLTAITEYEEVIQKHFLDSLSLIKSYQIKTGDTLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFPGI I + V L++S NK+ +FL V+ + + R +E
Sbjct: 77 MGTGAGFPGIPLKIAYPDLN---VLLMDSLNKRINFLNEVINRLELKNISAMHGRAEEQA 133
Query: 137 QMI---TTCDVISARALADLDTLLEYSFPWL 164
+ + D++ +RA+A +L E P++
Sbjct: 134 RKLDFREKFDIVVSRAVARTASLAELCLPYV 164
>gi|255008944|ref|ZP_05281070.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis 3_1_12]
Length = 224
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL RV + P + +
Sbjct: 28 DLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRFRPGSKV-M 86
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 87 DLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEE 143
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q T D + +RA+ L L++
Sbjct: 144 KQ---TFDFVVSRAVMPLADLIK 163
>gi|50085458|ref|YP_046968.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. ADP1]
gi|55976394|sp|Q6F9W7|RSMG_ACIAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49531434|emb|CAG69146.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ADP1]
Length = 212
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D+G
Sbjct: 18 DLSDEVLGLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPQGRL-LDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI--QEAP 136
+GGG PG+I I L E V L++S KK FL+ + + V R+ +E+
Sbjct: 77 TGGGMPGMI--IALCQPERNCV-LLDSNGKKIRFLKQFIADLKLKNVVAVQTRVENEESI 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q + DVI++RA A L ++ + P++Y+
Sbjct: 134 QELGKFDVITSRAFASLLDFVDAARPYMYE 163
>gi|270293003|ref|ZP_06199214.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
gi|270278982|gb|EFA24828.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
Length = 245
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + + E ++ L ++W++KINL + + E+ +++H DS+ + Q L +I +D
Sbjct: 25 LSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLISNETIKLLD 84
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 85 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFA 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E + P+L
Sbjct: 142 QDKNFRAHFDMVTARAVARMQILSELTIPYL 172
>gi|251800243|ref|YP_003014974.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
gi|247547869|gb|ACT04888.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
Length = 240
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S + LE+ + ++ L ++W++K+NL + + + +H DS+ + + SI D
Sbjct: 19 LSPKQLEQFDSYHRLLVEWNEKMNLTGITERDAVFEKHFYDSISLSFFVNMKEVGSI-AD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACR 131
+GSG GFP I I ++ V +++S NK+ FL ++VQ+ G+ A
Sbjct: 78 IGSGAGFPSIPLKICYPHLK---VVIVDSLNKRIQFLNHLVQELGLENVNCVHGR--AED 132
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPW 163
I P + D+++ARA+A L+ L E+ P+
Sbjct: 133 IARMPAYRDSFDLVTARAVARLNVLNEFCLPF 164
>gi|326692159|ref|ZP_08229164.1| 16S rRNA methyltransferase GidB [Leuconostoc argentinum KCTC 3773]
Length = 239
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIW 75
++ +++ E ++ + + + +NL + + +D +++H DSL V Q L
Sbjct: 16 QLTENQIQQFEQYFDMLVATNAHVNLTAITEKKDVYLKHFYDSLTVAQYEKDLQQTNGTL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
ID+G+G GFP + I +++ + ++++ K+ FL+ VV G A
Sbjct: 76 IDVGTGAGFPSLPLKIAFPNLQ---ITMVDALQKRVKFLQDVVTTLGITGVTIVHGRAED 132
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I + P+ D +ARA+A L EY+ P++
Sbjct: 133 IGQDPKYREQFDYATARAVARTSVLAEYTLPFV 165
>gi|307718007|ref|YP_003873539.1| methyltransferase [Spirochaeta thermophila DSM 6192]
gi|306531732|gb|ADN01266.1| putative methyltransferase [Spirochaeta thermophila DSM 6192]
Length = 214
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 24/170 (14%)
Query: 5 DSNSIL-RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D S+L R LL + L Y + L +W +I+LV+ + E + H+ DSL
Sbjct: 3 DPASLLDRGLALLGLSPTPSQRAALLSYLHLLA-EWGARIDLVADPSPEALAV-HLLDSL 60
Query: 64 RVFQLHPYP-------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
P P S DLGSG G PGI +I +E V L+E++ K+A FL +
Sbjct: 61 A-----PLPHLRALLSSPLADLGSGAGLPGIPLAIMNPHLE---VLLVEARGKRAVFLEH 112
Query: 117 VVQKT-AARGKVFACRIQEAPQMITTCDVISARALADL--DTLLEYSFPW 163
V+ AR V R+++ P + C V ARA L DTL Y P
Sbjct: 113 VLLSVDLARCTVLHARLEDLPLHV-PCAV--ARAFLPLSPDTLPLYLHPL 159
>gi|91218084|ref|ZP_01255034.1| glucose-inhibited division protein B [Psychroflexus torquis ATCC
700755]
gi|91183728|gb|EAS70121.1| glucose-inhibited division protein B [Psychroflexus torquis ATCC
700755]
Length = 211
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ L++ E ++ W++KIN+VS +++ +IRHV S+ + ++ P+ S +D
Sbjct: 10 DLDDNQLKQFEKISEVYKDWNQKINVVSRKDIDEIYIRHVLHSMGIAKIQPFLPGSKVLD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I E L++S KK + VV++ + K R++
Sbjct: 70 VGTGGGFPGIPLAILFPETE---FTLVDSIGKKIKVVEDVVEELGLQNVKAINDRVE--- 123
Query: 137 QMITTCDVISARALA 151
+ D I +RA+A
Sbjct: 124 NISGEFDFIVSRAVA 138
>gi|124010468|ref|ZP_01695107.1| methyltransferase GidB [Microscilla marina ATCC 23134]
gi|123983446|gb|EAY23934.1| methyltransferase GidB [Microscilla marina ATCC 23134]
Length = 211
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 13/137 (9%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L+ W++KIN+VS V+ + RHV SL +V Q P + +DLG+GGGFPG+ +I
Sbjct: 28 LYQDWNEKINVVSRKDVDMLYERHVLHSLGIAKVIQFKPGSKV-LDLGTGGGFPGVPLAI 86
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARA 149
E LV+ I K K VVQ+ A + + ++ ++ D I +RA
Sbjct: 87 MFPKTEFYLVDSIAKKIK-------VVQEVVAGLGLTNVKAEQVRVEKVDDDFDFIVSRA 139
Query: 150 LADLDTLLEYSFPWLYQ 166
+A L TL +S Y+
Sbjct: 140 VAPLKTLHNWSQDKFYK 156
>gi|154503058|ref|ZP_02040118.1| hypothetical protein RUMGNA_00880 [Ruminococcus gnavus ATCC 29149]
gi|153796299|gb|EDN78719.1| hypothetical protein RUMGNA_00880 [Ruminococcus gnavus ATCC 29149]
Length = 237
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
E+ +Y L ++W+K +NL + ++ +H DSL + + + ID+G+G GF
Sbjct: 22 EQFHQYYELLVEWNKVMNLTGITEYDEVNEKHFVDSLAIVKTVDMNQVNSVIDIGTGAGF 81
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAP 136
PG+ I ++ V L++S K+ +FL VV+K R + FA +
Sbjct: 82 PGLPLKIAFPHLK---VVLLDSLKKRINFLDAVVEKLGLEDVETLHGRAEDFAKQTAYRE 138
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
Q D+ +RA+A+L TL EY P++
Sbjct: 139 QF----DLCVSRAVANLSTLSEYCIPYI 162
>gi|82523806|emb|CAI78549.1| hypothetical protein [uncultured Chloroflexi bacterium]
Length = 262
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIWIDLGSGG 82
L+ L + ++W+ +INL + ++ +H DSL + P P +D+G+G
Sbjct: 46 LDALARYEQELIQWNARINLTAIRHPQEIRTKHFLDSLTCLLALRETP-PERLVDVGTGA 104
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ---EAPQM 138
GFPGI + ++ + L+ES KKA F R+VV+ + G +V R + ++P+
Sbjct: 105 GFPGIPLKVIYPKMQ---LTLVESVGKKAEFCRHVVRTLSLTGVEVIQGRAETLGQSPEH 161
Query: 139 ITTCDVISARALADLDTLLEYSFP 162
D ARA+A L L EY P
Sbjct: 162 REKFDWAVARAVAILPVLAEYLLP 185
>gi|270294064|ref|ZP_06200266.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D20]
gi|270275531|gb|EFA21391.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D20]
Length = 206
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E + Y L+L W+ KIN++S +E+ + HV SL +V + P I +
Sbjct: 10 DLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRFRPGTQI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I ++ +L++S KK + + F R A
Sbjct: 69 DLGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVRVASEIANSIGLKNVTF--RHARAE 123
Query: 137 QMITTCDVISARALADLDTLLE 158
+ D + +RA+ L LL+
Sbjct: 124 EEKGKFDFVVSRAVMPLTDLLK 145
>gi|257785162|ref|YP_003180379.1| methyltransferase GidB [Atopobium parvulum DSM 20469]
gi|257473669|gb|ACV51788.1| methyltransferase GidB [Atopobium parvulum DSM 20469]
Length = 252
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-H 69
N LL+ Y + L++ + L ++ ++++NL ++++D I H+ DSL ++
Sbjct: 17 NELLHNYGIDSTELQRKQLLGHIELLIEINERLNLTRITSIDDALILHILDSLLPLKVCD 76
Query: 70 PYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ S +ID+G+GGGFPG + L+ + L++S KK + ++ ++ + K
Sbjct: 77 EFISCNRNYIDIGTGGGFPG----LPLAIMSNNKTLLVDSIGKKVNAVQSMINEIGLEEK 132
Query: 127 VFA--CRIQEAPQMI-TTCDVISARALADLDTLLEYSFPWL 164
V A R +E P D ++ RA+A + LLEY+ P+L
Sbjct: 133 VKAEKLRAEEIPNTYKQKFDFVTFRAVAKTNILLEYAEPFL 173
>gi|331266663|ref|YP_004326293.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
gi|326683335|emb|CBZ00953.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
Length = 237
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WID 77
+S + + E ++ L ++W+++INL + + E+ +++H DS+ + Q L +I +D
Sbjct: 17 LSDQQKNQFERYFELLVEWNERINLTAITDKEEVYLKHFYDSIAPILQGLISNETIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F A
Sbjct: 77 IGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A + L E + P+L
Sbjct: 134 QDKKFRAQFDMVTARAVARMQILSELTIPYL 164
>gi|254000526|ref|YP_003052589.1| methyltransferase GidB [Methylovorus sp. SIP3-4]
gi|253987205|gb|ACT52062.1| methyltransferase GidB [Methylovorus sp. SIP3-4]
Length = 219
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 15/142 (10%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PS 73
++VS+ T +KL + L KW+K NL + ++ H+ DSL V P+ PS
Sbjct: 16 WDVSQATQQKLLDYLALLQKWNKVHNLTAVRDPDEMVTLHLLDSLSVL---PHVQALSPS 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRI 132
+D+GSG G PGII ++ + ++ V I++ KKASF+R + A +V A R+
Sbjct: 73 RLLDVGSGAGLPGIILALCMPDLK---VTTIDAVQKKASFMRQAKAELGIANLEVIAGRV 129
Query: 133 -QEAPQMITTCDVISARALADL 153
Q P D++ +RA +++
Sbjct: 130 EQHRPS--QAYDIVISRAFSEI 149
>gi|226315525|ref|YP_002775421.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
gi|254766884|sp|C0ZA63|RSMG_BREBN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226098475|dbj|BAH46917.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
Length = 238
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGF 84
E+ ++F+ L ++W++K+NL + + +H DS+ P+ + +D+G G GF
Sbjct: 23 EQFDHFFRLLVEWNEKMNLTGITEEGQVYNKHFYDSITPAFYFPFDQVQSVVDIGGGAGF 82
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQM 138
P I I ++ + +I+S NK+ SFL++V ++ G+ R QEA
Sbjct: 83 PSIPLKICFPHLK---MTIIDSLNKRMSFLQHVAKELGLENVNPVHGRA-EDRGQEA-MY 137
Query: 139 ITTCDVISARALADLDTLLEYSFPW 163
D++ ARA+A L+ L E+ P+
Sbjct: 138 REKFDLVVARAVARLNLLSEFCLPF 162
>gi|224823522|ref|ZP_03696631.1| methyltransferase GidB [Lutiella nitroferrum 2002]
gi|224603977|gb|EEG10151.1| methyltransferase GidB [Lutiella nitroferrum 2002]
Length = 208
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++++E + +LE + L KW++ NL + E H+ DSL + + +D+G
Sbjct: 17 DLTQEQIARLESYLALLAKWNQTYNLTAVREEERMVSYHLLDSLTLVPQLAGGTRLLDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVFACRIQEAPQM 138
SGGG PGI +I ++ V L++S +KK +FLR V++ +V R+ EA Q
Sbjct: 77 SGGGMPGIPAAIARPDLQ---VVLLDSNHKKTTFLRQAVIELKLDNVEVVTNRV-EAYQP 132
Query: 139 ITTCDVISARALADL 153
D I++RA A+L
Sbjct: 133 EQKFDRITSRAFAEL 147
>gi|325478845|gb|EGC81955.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 212
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
L+ + NL + + I+H +DSL + +D+G+G GFPGI I+
Sbjct: 14 LLEVNSHTNLTAIIDPSEIEIKHFKDSLTILDYIKEGDKVLDIGAGAGFPGIPLRIE-KE 72
Query: 96 IEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQE-APQMITTCDVISARALADL 153
I+ + LI+S NKK F+ V++K + R ++ A DV+ +RA+A++
Sbjct: 73 ID---LTLIDSVNKKVKFMNEVIEKLNLENARAIHVRAEDFAKDQREKYDVVVSRAVANM 129
Query: 154 DTLLEYSFPWL 164
TL EY P+L
Sbjct: 130 RTLSEYCLPFL 140
>gi|122879365|ref|YP_203195.6| 16S rRNA methyltransferase GidB [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188579176|ref|YP_001916105.1| 16S rRNA methyltransferase GidB [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|189040869|sp|Q5GU13|RSMG_XANOR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238689462|sp|B2SU21|RSMG_XANOP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188523628|gb|ACD61573.1| methyltransferase GidB [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 212
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + RH+ DSL + PY + DLG+G G PGI
Sbjct: 34 YLALLVRWNKTYNLTAVRDPRAMVTRHLLDSL---AMQPYIASGMLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ R A EA T D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPTAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|160889787|ref|ZP_02070790.1| hypothetical protein BACUNI_02218 [Bacteroides uniformis ATCC 8492]
gi|156860779|gb|EDO54210.1| hypothetical protein BACUNI_02218 [Bacteroides uniformis ATCC 8492]
Length = 206
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E + Y L+L W+ KIN++S +E+ + HV SL +V + P I +
Sbjct: 10 DLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRFRPGTQI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I ++ +L++S KK + + F R A
Sbjct: 69 DLGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVRVASEIANSIGLKNITF--RHARAE 123
Query: 137 QMITTCDVISARALADLDTLLE 158
+ D + +RA+ L LL+
Sbjct: 124 EEKGKFDFVVSRAVMPLTDLLK 145
>gi|32266985|ref|NP_861017.1| 16S rRNA methyltransferase GidB [Helicobacter hepaticus ATCC 51449]
gi|55976489|sp|Q7VG38|RSMG_HELHP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|32263037|gb|AAP78083.1| glucose inhibited division protein B [Helicobacter hepaticus ATCC
51449]
Length = 185
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
LKW+K NL +S++E + ++ DSL + + +D+GSGGGFP I + ++
Sbjct: 17 LLKWNKIHNLTGASSIESV-MENIFDSLYPLRFIDDFTSCMDIGSGGGFPAI--PLAIAK 73
Query: 96 IEGGLVNLIESKNKKASFLR-YVVQKTAARGKVFACRIQEAP-QMITTCDVISARALADL 153
+ + LIE +NK++ FL+ ++Q +V RIQ+ P + D+I++RAL D
Sbjct: 74 PQSHFI-LIEPRNKRSCFLQNIIIQLELNNVQVRPIRIQDVPIAEVNNLDLITSRALMDA 132
Query: 154 DTLLEYSFPWL 164
L+ S +L
Sbjct: 133 KELISLSRKFL 143
>gi|309379103|emb|CBX22234.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 207
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DVI++RA A+L
Sbjct: 124 SGRVEAVSDV--RADVITSRAFAEL 146
>gi|226326136|ref|ZP_03801654.1| hypothetical protein COPCOM_03955 [Coprococcus comes ATCC 27758]
gi|225205678|gb|EEG88032.1| hypothetical protein COPCOM_03955 [Coprococcus comes ATCC 27758]
Length = 238
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+++ + + +Y + ++W+K +NL + E+ +H DSL + + + ID+
Sbjct: 16 LTQTQFNQFDKYYEMLVEWNKVMNLTGITEYEEVNEKHFVDSLALVKALDISKVQTVIDI 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFAC 130
G+G GFPGI I ++ + L++S NK+ FL V+++ R + FA
Sbjct: 76 GTGAGFPGIPLKIAFPHLK---ITLLDSLNKRIRFLDSVIEELNLTDIHTIHGRAEDFAR 132
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ Q D+ +RA+A+L TL EY P++
Sbjct: 133 QADYREQF----DLCVSRAVANLSTLSEYCLPYV 162
>gi|225386362|ref|ZP_03756126.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
gi|225047544|gb|EEG57790.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
Length = 243
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WIDLGSG 81
LE+ +Y L ++ +K +NL + + +D +H DSL + +L + +D+G+G
Sbjct: 25 LEQFFRYYELLVERNKVMNLTAITEEQDVVTKHFTDSLSLVKLMGAEAFAGKTLMDVGTG 84
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKV--FACRIQ 133
GFPGI I + V L++S NK+ FL V ++ TA G+ F +Q
Sbjct: 85 AGFPGIPLKIAFPELN---VTLLDSLNKRVRFLMDVCEELGLKDITAVHGRAEDFGRNLQ 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
Q D+ +RA+A+L +L EY P++
Sbjct: 142 YREQF----DLCVSRAVANLASLSEYCMPFV 168
>gi|159027599|emb|CAO86971.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 225
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 32/171 (18%)
Query: 19 YNVSRETLE---------KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--- 66
+++ +ETLE + + Y L L+ +++ NL + E+FW +H+ DSL
Sbjct: 7 FDLWQETLEWQPDGARQARFQQLYELILEGNQRFNLTRITQPEEFWEKHLWDSLSGLAWL 66
Query: 67 -----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L P IDLG+G GFPG+ +I S V L++S KK +FL V+ K
Sbjct: 67 QKSQPDLLTKPLSVIDLGTGAGFPGLPIAIAYSHWS---VTLLDSTQKKINFLEEVIDKL 123
Query: 122 A--------ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R ++ ++ D++ RA+ ++D + Y+ P+L
Sbjct: 124 ELNNTKTRLGRAEIVGKNLKHN----CAYDIVCLRAVGNVDICVNYALPFL 170
>gi|170760430|ref|YP_001788983.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
gi|193806441|sp|B1KUB0|RSMG_CLOBM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169407419|gb|ACA55830.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
Length = 239
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W+KK+NL + E+ +H D +++F+ P ID+G+G GFPGI I
Sbjct: 32 LIQEWNKKVNLTAIVEDEEIIKKHFIDCIKIFKASPIGEAKSLIDIGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
I+ + L++S K+ +FL V +Q R + +A QEA DV
Sbjct: 92 REDIK---ITLLDSLQKRINFLNIVIGDLKLKDIQCLHGRAEDYA---QEAEHR-QKYDV 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E+ P++
Sbjct: 145 AVSRAVANLAVLSEFCIPFV 164
>gi|29346555|ref|NP_810058.1| 16S rRNA methyltransferase GidB [Bacteroides thetaiotaomicron
VPI-5482]
gi|253568083|ref|ZP_04845494.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
1_1_6]
gi|38257555|sp|Q8A8M2|RSMG_BACTN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29338451|gb|AAO76252.1| glucose-inhibited division protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842156|gb|EES70236.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
1_1_6]
Length = 206
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL +V Q P + +
Sbjct: 10 DLTEEQRKQFAALYDLYIDWNAKINVISRKDIENLYEHHVLHSLGIAKVIQFRPGTKV-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 69 DLGTGGGFPGIPLAILFPETK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L L++
Sbjct: 126 KQLF---DFVVSRAVMPLADLIK 145
>gi|319891295|ref|YP_004148170.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
gi|317160991|gb|ADV04534.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
Length = 239
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S ++ E +Y + ++W++KINL S + + +++H DS+ H + P D+
Sbjct: 17 LSEHQKQQFEKYYEMLVEWNEKINLTSITEKHEVYLKHFYDSITPSFYHDFNQPLNLCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I I V ++++ NK+ FL + + G F A +
Sbjct: 77 GAGAGFPSIPLKIIFPEIH---VTIVDALNKRIQFLNQLAEALELEGVRFVHDRAETFAK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
++ DV++ARA+A + L E P +
Sbjct: 134 NEDYRSSFDVVTARAVARMTVLSELCIPLV 163
>gi|71898518|ref|ZP_00680689.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|71731642|gb|EAO33702.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
Length = 254
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + Q +
Sbjct: 58 YGLDILELDRAYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAI-QRYVTVG 116
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ +
Sbjct: 117 RLADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVRA 173
Query: 134 EAPQMITTCDVISARALADLDTLL 157
EA + ++ARAL L+ ++
Sbjct: 174 EALDEALMYEHLTARALDTLNGIV 197
>gi|229000271|ref|ZP_04159840.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
gi|229007796|ref|ZP_04165382.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228753473|gb|EEM02925.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228759603|gb|EEM08580.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
Length = 239
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D
Sbjct: 16 NLSPRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYNDFSKPFSICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I ++ V +++S K+ +FL ++ QK F A
Sbjct: 76 VGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D++ ARA+A L L E P +
Sbjct: 133 KKEGVRESFDIVMARAVARLSVLSELCLPLV 163
>gi|152979952|ref|YP_001355328.1| 16S rRNA methyltransferase GidB [Janthinobacterium sp. Marseille]
gi|189045855|sp|A6T481|RSMG_JANMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151280029|gb|ABR88439.1| glucose inhibited division protein B [Janthinobacterium sp.
Marseille]
Length = 220
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ N+S + KL + L KW+ NL + +H+ DSL +D
Sbjct: 21 SLNLSEAQITKLIDYLALMAKWNSVYNLTAVRDPVQMVTQHLLDSLAAVSAFSNAKNVLD 80
Query: 78 LGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYV-VQKTAARGKVFACRIQ-- 133
+G+GGG PGI+ +I + + +++I++ +KK +FL V + + V+ R++
Sbjct: 81 VGAGGGLPGIVLAIWAAEAHPEMRISMIDTVHKKTAFLTQVKAELNLSNVSVYTARVEQW 140
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
+APQ DVI++RA ADL + +S
Sbjct: 141 QAPQKF---DVITSRAFADLSDFVNWS 164
>gi|118471658|ref|YP_891133.1| methyltransferase GidB [Mycobacterium smegmatis str. MC2 155]
gi|189045863|sp|A0R7J5|RSMG_MYCS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118172945|gb|ABK73841.1| methyltransferase GidB [Mycobacterium smegmatis str. MC2 155]
Length = 235
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LE E + + + L+ V+ W RH+ +S + +L D+GSG G
Sbjct: 19 DRLEAAELYARILAGAGVEWGLLGPREVDRVWERHILNSAALGELMEPGERVADIGSGAG 78
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-----TAARGKVFACRIQEAPQM 138
PGI ++ I V LIE +++ FLR V + T RG+ +E
Sbjct: 79 LPGIPLALARPDIH---VTLIEPLLRRSEFLRETVTELGLDVTVVRGR---AEDREVRDR 132
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ DV+++RA+A LD L +S P+L
Sbjct: 133 VGEMDVVTSRAVASLDKLTRWSVPFL 158
>gi|311070641|ref|YP_003975564.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
gi|310871158|gb|ADP34633.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
Length = 239
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ + + D
Sbjct: 16 SLSSRQLEQFELYYEMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFKQVNTICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ V++++S NK+ +FL + + F A
Sbjct: 76 VGAGAGFPSLPIKICFPHLQ---VSIVDSLNKRITFLEKLAEALQLENTSFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D+++ARA+A L L E P +
Sbjct: 133 QRQDLRESYDIVTARAVARLSVLSELCLPLV 163
>gi|256425869|ref|YP_003126522.1| methyltransferase GidB [Chitinophaga pinensis DSM 2588]
gi|256040777|gb|ACU64321.1| methyltransferase GidB [Chitinophaga pinensis DSM 2588]
Length = 207
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGG 83
L++L+ L+ +W++KIN++S ++ + +HV SL + + +P+ +DLG+GGG
Sbjct: 16 LQQLQALSGLYQEWNEKINVISRKDIDALYEKHVLHSLSIAAVADFPNGMQILDLGTGGG 75
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTC 142
FPGI +I ++ +L++S KK + V + + F R+++
Sbjct: 76 FPGIPLAIFFPEVQ---FHLVDSIGKKIKVVEGVSEALGLKNVTFKHSRVEDIKD--RKF 130
Query: 143 DVISARALADLDTLLEYSFPWL 164
D++ +RA+A L L +S P L
Sbjct: 131 DLVVSRAVAPLKDLWRWSKPVL 152
>gi|313667500|ref|YP_004047784.1| glucose inhibited division protein B [Neisseria lactamica ST-640]
gi|313004962|emb|CBN86390.1| glucose inhibited division protein B [Neisseria lactamica 020-06]
Length = 207
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DV+++RA A+L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAEL 146
>gi|229917463|ref|YP_002886109.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
gi|259495495|sp|C4L001|RSMG_EXISA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229468892|gb|ACQ70664.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
Length = 238
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIW 75
+ +S L + + ++ + ++W++K+NL + + E+ +++H DSL F ++
Sbjct: 15 FELSETQLSQFKRYFEMLVEWNEKMNLTAITDREEVYLKHFYDSLSAAFHFDFTKVETVC 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
D+G+G GFP + I + V +I+S NK+ +FL + G F A
Sbjct: 75 -DVGAGAGFPSLPLKILFPHLH---VTIIDSLNKRITFLNELALALGLEGVAFHHGRAEE 130
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + DV++ARA+A + L EY P
Sbjct: 131 FGKNKKFREQFDVVTARAVARMTVLAEYCLP 161
>gi|168334917|ref|ZP_02693037.1| methyltransferase GidB [Epulopiscium sp. 'N.t. morphotype B']
Length = 236
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGGFPGIITSI 91
L L+W++K+NL + + ++ +H DSL V L Y ++ +D+G+G GFPG++ I
Sbjct: 30 LLLEWNQKLNLTAITKEDEIITKHFLDSLSVNMAVDLLKYKNL-VDVGTGAGFPGLVLKI 88
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCDVISA 147
+ + L++S K+ +FL V++ + V A I + Q D+ S
Sbjct: 89 AYPHLN---IVLVDSLKKRLTFLDAVIEILKLKHVVTVHGRAEDIAKDVQYREKFDICSP 145
Query: 148 RALADLDTLLEYSFPWL 164
RA+++L TL EY+ P++
Sbjct: 146 RAVSNLATLSEYALPFV 162
>gi|329768827|ref|ZP_08260256.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
gi|328838220|gb|EGF87833.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
Length = 238
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIIT 89
+Y L ++W++KINL + + E+F+ +H DS+ + Y ++ D+GSG GFP I
Sbjct: 30 YYELVVEWNQKINLTAITEEEEFYSKHFYDSISLAFFKDYSNVDNICDVGSGAGFPSIPL 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ---MITTCDVI 145
I ++E V +++S NK+ FL + + F R +E Q +++
Sbjct: 90 KILYPNLE---VTIVDSLNKRIKFLNLLKDELELTNCNFIHARAEEIGQNRDYREKFEIV 146
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A L+ L E P +
Sbjct: 147 TARAVARLNVLSELCLPLV 165
>gi|312897436|ref|ZP_07756860.1| 16S rRNA methyltransferase GidB [Megasphaera micronuciformis F0359]
gi|310621497|gb|EFQ05033.1| 16S rRNA methyltransferase GidB [Megasphaera micronuciformis F0359]
Length = 237
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 13/167 (7%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
C + + R Y N++ + LEK + F L + +K +NL + + ++ ++H DSL
Sbjct: 4 CKGDELFRLAYP----NITDDELEKFKIFAGLLEEKNKVMNLTAITDADEVTVKHFIDSL 59
Query: 64 RVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + + +DLG+G GFPGI +I ++ + +S K+ +FL+ V
Sbjct: 60 SCYDERFFFTGAKVLDLGTGAGFPGIPLAIMHDDLK---ITFFDSLQKRLTFLKEVTTTL 116
Query: 122 AARGKVF--ACRIQEAPQMI--TTCDVISARALADLDTLLEYSFPWL 164
+ + F +EA + I D+++ RA+A L L+E++ P++
Sbjct: 117 SYKQAEFLHGRAEEEAHKDIYREAFDIVTTRAVARLPVLVEWALPYV 163
>gi|225575642|ref|ZP_03784252.1| hypothetical protein RUMHYD_03735 [Blautia hydrogenotrophica DSM
10507]
gi|225037152|gb|EEG47398.1| hypothetical protein RUMHYD_03735 [Blautia hydrogenotrophica DSM
10507]
Length = 239
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
E+ +Y L ++W+K +NL + E+ +H DSL V ++ I ID+G+G GF
Sbjct: 24 EQFVQYYELLIEWNKVMNLTGITEFEEVLQKHFVDSLSVKKVVDLTKISRVIDVGTGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAP 136
PGI I ++ + L++S K+ FL V+ + R + +A R +
Sbjct: 84 PGIPLKIVFPELK---ITLLDSLQKRIKFLNEVIGRLCLKDIEAIHGRAEEYARRKEYRE 140
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
Q D+ +RA+A+L +L EY P++
Sbjct: 141 QY----DLCVSRAVANLASLSEYCLPYV 164
>gi|325066327|ref|ZP_08125000.1| methyltransferase GidB [Actinomyces oris K20]
Length = 214
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWTRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ R A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDN--VTIRRARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWL 164
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLL 157
>gi|307709239|ref|ZP_07645697.1| methyltransferase GidB [Streptococcus mitis SK564]
gi|307619822|gb|EFN98940.1| methyltransferase GidB [Streptococcus mitis SK564]
Length = 237
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 15 LLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHP 70
LL +N+ S + ++ E ++ L ++W+ KINL + + E+ +++H DS+ + Q L
Sbjct: 9 LLAEHNLPLSDQQKKQFERYFELLVEWNGKINLTAITDKEEVYLKHFYDSIAPILQGLIS 68
Query: 71 YPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+I +D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F
Sbjct: 69 NETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFY 125
Query: 129 ---ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + D ++ARA+A + L E + P+L
Sbjct: 126 HGRAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYL 164
>gi|289422527|ref|ZP_06424370.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
gi|289157099|gb|EFD05721.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
Length = 240
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 21/151 (13%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---IWIDLGSGG 82
L++ E + + + +++ +NL + + +I+H DS+ +F+ H Y + ID+G+G
Sbjct: 25 LDRFETYREILVDFNQHMNLTGITDQREVYIKHFLDSVAIFK-HGYLTGDLSVIDVGTGA 83
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF---------ACRIQ 133
GFPG+ I IE + L++S NK+ +FL+ V RG F A I
Sbjct: 84 GFPGLPFKIANPDIE---LTLLDSLNKRINFLKEV-----GRGIGFDDIDYVHGRAEEIG 135
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+ +ARA+A+L LLE P++
Sbjct: 136 QNKDYRQKFDIATARAVANLPVLLELCVPFV 166
>gi|261400115|ref|ZP_05986240.1| 16S rRNA methyltransferase GidB [Neisseria lactamica ATCC 23970]
gi|269210347|gb|EEZ76802.1| 16S rRNA methyltransferase GidB [Neisseria lactamica ATCC 23970]
Length = 207
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAELADFVSWTVHLL 157
>gi|218779527|ref|YP_002430845.1| methyltransferase GidB [Desulfatibacillum alkenivorans AK-01]
gi|218760911|gb|ACL03377.1| methyltransferase GidB [Desulfatibacillum alkenivorans AK-01]
Length = 223
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
LEK F L + + ++NL S D ++H DSL P + D+GSG GF
Sbjct: 30 ALEKCAAFARLLAQANNRVNLSSIRDPRDMAVKHFADSLAPIPYIPEGAKVADIGSGAGF 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ----EAPQMI 139
PG++ +I ++ + IE+ KKA+F R+ + + K++ R + E + +
Sbjct: 90 PGLVLAIFRPDLQ---LTSIETIRKKANFQRHAALELGLSNVKIYNIRAENWKTEGDKGL 146
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D + RAL+DL +L ++ P L K
Sbjct: 147 -LFDAVVCRALSDLSAILSWARPMLAPK 173
>gi|28198767|ref|NP_779081.1| glucose-inhibited division protein B [Xylella fastidiosa Temecula1]
gi|182681460|ref|YP_001829620.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa M23]
gi|32129539|sp|Q87D24|RSMG_XYLFT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691037|sp|B2I4Q1|RSMG_XYLF2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28056858|gb|AAO28730.1| glucose inhibited division protein [Xylella fastidiosa Temecula1]
gi|182631570|gb|ACB92346.1| methyltransferase GidB [Xylella fastidiosa M23]
gi|307579911|gb|ADN63880.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 212
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + Q +
Sbjct: 15 EYGLDILELDRAYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAI-QRYVTV 73
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ +
Sbjct: 74 GRLADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVR 130
Query: 133 QEAPQMITTCDVISARALADLDTLL 157
EA + ++ARAL L+ ++
Sbjct: 131 AEALDEALMYEHLTARALDTLNGIV 155
>gi|238926482|ref|ZP_04658242.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
gi|238885676|gb|EEQ49314.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
Length = 240
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDL 78
++ E + + + + L W+ ++NL + + ED ++H+ DSL + L ID+
Sbjct: 19 LTAEQVGQFSVYNEMLLDWNTRMNLTALTAPEDVAVKHIIDSLTAYDAALFDGARTLIDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PGI ++ + V L++S NK+ +R++++ TAA G I +
Sbjct: 79 GTGAGLPGIPLAVYAPHLT---VTLLDSLNKR---VRFLMEVTAAMGLPNVRCIHARAEE 132
Query: 139 ITTC-------DVISARALADLDTLLEYSFPWL 164
D+ +RA+A L LLEY+ P++
Sbjct: 133 AARTAEHRAAYDIAVSRAVARLPVLLEYALPFV 165
>gi|329767566|ref|ZP_08259087.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
gi|328839193|gb|EGF88777.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
Length = 237
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 26 LEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSG 81
L+K +Y +Y L ++W++KINL + + ++F+ +H DS+ + Y +I D+GSG
Sbjct: 21 LQKEQYSKYYDLVVEWNQKINLTAITEEDEFYTKHFFDSISLAFYKDYSNIESICDVGSG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQ--- 137
GFP I I +++ V +++S NK+ FL V + F R +E Q
Sbjct: 81 AGFPSIPLKILYPNLK---VTIVDSLNKRIKFLNLVKDELGLSDCNFVHARAEEFGQNKD 137
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ ++++ARA+A L+ L E P +
Sbjct: 138 YRESFEIVTARAVARLNVLAELCLPLV 164
>gi|194476666|ref|YP_002048845.1| putative glucose inhibited division protein B [Paulinella
chromatophora]
gi|171191673|gb|ACB42635.1| putative glucose inhibited division protein B [Paulinella
chromatophora]
Length = 245
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWIDLGSGG 82
+++L+ L +W+ ++NL EDFWI V DSL Q +P P ID+G+G
Sbjct: 27 IDQLKLLQILLSEWNHRVNLTRLVEGEDFWITQVFDSLWPLQRLLNNPRPIRCIDVGTGC 86
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FAC-RIQEAPQMIT 140
GFPG+ +I L + L++S +K ++ +V+ ++ F RI+ Q +
Sbjct: 87 GFPGLALAIALPEAS---LTLVDSVGRKIEAVKAIVESLGLSDRISFRIERIERTGQDL- 142
Query: 141 TC----DVISARALADLDTLLEYSFPWLYQ 166
C D+ ARA+ + EY P L +
Sbjct: 143 NCRNQFDMAIARAVGTPTVVAEYLLPLLAE 172
>gi|170016607|ref|YP_001727526.1| methyltransferase GidB [Leuconostoc citreum KM20]
gi|193806446|sp|B1MX30|RSMG_LEUCK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169803464|gb|ACA82082.1| Methyltransferase GidB [Leuconostoc citreum KM20]
Length = 239
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIW 75
++ + +E+ + ++ L ++ +K+ NL + + +D +++H DSL V L S
Sbjct: 16 TLTEQQIEQFQRYFELLVEANKQFNLTAITDEKDVYLKHFYDSLTVAIYVKALQHQSSTL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G GFP + I ++ + ++++ K+ FL+ VV + + R ++
Sbjct: 76 IDVGTGAGFPSLPLKIAFPQLK---ITMVDALQKRVRFLQDVVDTLDLKNVSIVHGRAED 132
Query: 135 APQMIT---TCDVISARALADLDTLLEYSFPWL 164
Q + D +ARALA L EY+ P++
Sbjct: 133 IGQNVAYREQFDFATARALARTSVLAEYTLPFV 165
>gi|262372458|ref|ZP_06065737.1| 16S rRNA methyltransferase GidB [Acinetobacter junii SH205]
gi|262312483|gb|EEY93568.1| 16S rRNA methyltransferase GidB [Acinetobacter junii SH205]
Length = 210
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N+S E L L + + W+K NL + ++ ++H+ DSL + P + +D+G
Sbjct: 18 NLSEEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILNDLPKGRL-LDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+GGG PG+I I L E V L++S KK FL+ + + + R++ +
Sbjct: 77 TGGGMPGMI--IALCQPERDCV-LLDSNGKKIRFLKQFIADLNLKNVIAVQTRVENEDSI 133
Query: 139 --ITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DVI++RA A L ++ + P++++K
Sbjct: 134 NELGQFDVITSRAFASLTDFVDAAQPYMHEK 164
>gi|326793314|ref|YP_004311135.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
gi|326544078|gb|ADZ85937.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
Length = 238
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N++ L + + L +W++K+NL + + + +H D + + ++ ++ I
Sbjct: 15 NLTETQLNQFMMYKSLLQEWNEKMNLTAITEDREVMTKHFLDCMTIQKAIDMNTQKTV-I 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPG++ I +E + L+++ K+ +FL V+ + +G K R ++
Sbjct: 74 DIGTGAGFPGLVIKIAFPHLE---LTLVDALKKRLTFLEEVINQLGLKGIKCIHSRAEDL 130
Query: 136 PQMIT---TCDVISARALADLDTLLEYSFPWL 164
+ D+ ++RA+A+L L EY+ P++
Sbjct: 131 GKNKAYREGFDICASRAVANLAVLSEYTLPFV 162
>gi|170724366|ref|YP_001752054.1| 16S rRNA methyltransferase GidB [Pseudomonas putida W619]
gi|193806450|sp|B1JFV1|RSMG_PSEPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169762369|gb|ACA75685.1| methyltransferase GidB [Pseudomonas putida W619]
Length = 216
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
+S E E+L + L +KW+K NL + ++ RH+ DSL V +HP W+D+G
Sbjct: 24 LSAEQHERLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMGFIHPDRDSWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
SGGG PGI +I V ++++ KK FL V
Sbjct: 84 SGGGMPGIPLAILHPQKR---VTVLDANGKKTRFLTQV 118
>gi|162446949|ref|YP_001620081.1| glucose inhibited division protein B [Acholeplasma laidlawii PG-8A]
gi|189039369|sp|A9NEC5|RSMG_ACHLI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161985056|gb|ABX80705.1| glucose inhibited division protein B [Acholeplasma laidlawii PG-8A]
Length = 230
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 15 LLNTY-------NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+LNTY ++ + + + +Y L + ++K NL ++ +D I+H DS+ + +
Sbjct: 1 MLNTYITNILGIKLTEQQNGQFDAYYNLLVAYNKHTNLTRITSRDDADIKHFLDSVLISK 60
Query: 68 LHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L + D+G+G GFP I I +I+ V ++ES+ K+ FL+ + Q
Sbjct: 61 LVDLNKVVTLCDMGAGAGFPSIPLLIVFPNIQ---VTIVESQIKRVQFLQELKQALGLEF 117
Query: 126 KVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWL 164
+ R + + + D+++ARAL +L +LE+ P L
Sbjct: 118 NIVHDRAENFSSKNYQQFDIVTARALGELRLILEFGVPML 157
>gi|326772849|ref|ZP_08232133.1| 16S rRNA methyltransferase GidB [Actinomyces viscosus C505]
gi|326637481|gb|EGE38383.1| 16S rRNA methyltransferase GidB [Actinomyces viscosus C505]
Length = 216
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 30 EHFAQMLAEEGELRGLVGPRELPRLWTRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ R A ++ DV++ARA
Sbjct: 90 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDN--VTIRRARAEEVKDRYDVVTARA 144
Query: 150 LADLDTLLEYSFPWL 164
+A+L L+ + P L
Sbjct: 145 VANLSKLVRLTAPLL 159
>gi|325697023|gb|EGD38910.1| glucose inhibited division protein B [Streptococcus sanguinis
SK160]
Length = 237
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + +K + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEKLGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
T D+++ARA+A + L E + P+L
Sbjct: 140 TQFDLVTARAVARMQVLSELTIPYL 164
>gi|29336750|sp|Q8GHA0|RSMG_HELBI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|27462195|gb|AAO15371.1| GidB [Helicobacter bizzozeronii]
Length = 179
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRH-VEDSLRVFQ-LHPYPSIWIDLGSGGGFP 85
KL+ F L L+W NL + +D I H ++DSL+V + P+ S +D+GSG GFP
Sbjct: 4 KLDLFTHLLLEWGSVHNLSGAKNHQD--IEHNIQDSLQVLDFIAPFKS-CLDIGSGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDV 144
I S+ S+ L+E KK +FL +V + ++ RI+ D+
Sbjct: 61 AIPLSLACSNAR---FILLEPNAKKVAFLHHVKLALNLNNLEIQRMRIEHVSPQSVLVDL 117
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
I++RAL + L+ S P+L ++
Sbjct: 118 ITSRALMNAQNLIALSAPFLREQ 140
>gi|254491148|ref|ZP_05104329.1| methyltransferase GidB [Methylophaga thiooxidans DMS010]
gi|224463661|gb|EEF79929.1| methyltransferase GidB [Methylophaga thiooxydans DMS010]
Length = 211
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S RH+ DSL V PS+ +D+G+GGG PG
Sbjct: 27 QQLLRYVALMHKWNKVYNLTSVRDPAQMMSRHIIDSLSVLPYLNAPSL-LDVGTGGGLPG 85
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDVI 145
I +I + V L++S +KK FL+ V + + V R+++ ++ +I
Sbjct: 86 IPAAI---AYPDSAVTLLDSNSKKTRFLQQVKAELGLSNVTVVHGRVEQVS--LSKFAII 140
Query: 146 SARALADLDTLLEYS 160
+ARA A +D ++E +
Sbjct: 141 TARAFASIDDIIELA 155
>gi|241889363|ref|ZP_04776664.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
gi|241863906|gb|EER68287.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
Length = 237
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 19/151 (12%)
Query: 26 LEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSG 81
L+K +Y +Y L ++W++KINL + + ++F+ +H DS+ + Y +I D+GSG
Sbjct: 21 LQKDQYSKYYDLVVEWNQKINLTAITEEDEFYTKHFFDSISLAFYKDYSNIESICDVGSG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQ 133
GFP I I +++ V +++S NK+ FL V + AR + F
Sbjct: 81 AGFPSIPLKILYPNLK---VTIVDSLNKRIKFLNLVKDELGLTDCNFVHARAEEFG---- 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + ++++ARA+A L+ L E P +
Sbjct: 134 QNKEYRESFEIVTARAVARLNILAELCLPLV 164
>gi|50365477|ref|YP_053902.1| glucose-inhibited methyltransferase [Mesoplasma florum L1]
gi|55976393|sp|Q6F0F5|RSMG_MESFL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50364033|gb|AAT76018.1| glucose-inhibited methyltransferase [Mesoplasma florum L1]
Length = 237
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGS 80
S E +KL +Y + ++ + K NL + ED + +H DSL + + ID+G+
Sbjct: 20 SEEIKDKLNEYYKILVEENLKYNLTRITNEEDVYEKHFLDSLLFTKETKIDNQKIIDIGT 79
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
G GFPGI+ I + + LI+S NKK +FL V++K + + R +E ++
Sbjct: 80 GPGFPGIVLKIFFPETD---ITLIDSNNKKINFLNIVIKKLNLKQIEAKHARAEELARIE 136
Query: 140 TTC-DVISARALADLDTLLEYSFPWL 164
D+ +RA+A LD +LE + +L
Sbjct: 137 NEKYDIAISRAVAYLDVILELAVRFL 162
>gi|59802110|ref|YP_208822.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA
1090]
gi|194099969|ref|YP_002003108.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae NCCP11945]
gi|239997976|ref|ZP_04717900.1| glucose-inhibited division protein B [Neisseria gonorrhoeae 35/02]
gi|240015045|ref|ZP_04721958.1| glucose-inhibited division protein B [Neisseria gonorrhoeae DGI18]
gi|240017494|ref|ZP_04724034.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA6140]
gi|240081635|ref|ZP_04726178.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA19]
gi|240113916|ref|ZP_04728406.1| glucose-inhibited division protein B [Neisseria gonorrhoeae MS11]
gi|240116648|ref|ZP_04730710.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID18]
gi|240118871|ref|ZP_04732933.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID1]
gi|240122114|ref|ZP_04735076.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
PID24-1]
gi|240124408|ref|ZP_04737364.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID332]
gi|240124720|ref|ZP_04737606.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
SK-92-679]
gi|240129085|ref|ZP_04741746.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
SK-93-1035]
gi|254494669|ref|ZP_05107840.1| methyltransferase gidB [Neisseria gonorrhoeae 1291]
gi|260439592|ref|ZP_05793408.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae DGI2]
gi|268593826|ref|ZP_06127993.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae 35/02]
gi|268597731|ref|ZP_06131898.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae FA19]
gi|268599978|ref|ZP_06134145.1| methyltransferase gidB [Neisseria gonorrhoeae MS11]
gi|268602316|ref|ZP_06136483.1| methyltransferase gidB [Neisseria gonorrhoeae PID18]
gi|268604578|ref|ZP_06138745.1| methyltransferase gidB [Neisseria gonorrhoeae PID1]
gi|268683035|ref|ZP_06149897.1| methyltransferase gidB [Neisseria gonorrhoeae PID332]
gi|268683297|ref|ZP_06150159.1| methyltransferase gidB [Neisseria gonorrhoeae SK-92-679]
gi|268687464|ref|ZP_06154326.1| methyltransferase gidB [Neisseria gonorrhoeae SK-93-1035]
gi|291042830|ref|ZP_06568571.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae DGI2]
gi|293398150|ref|ZP_06642355.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae F62]
gi|75432367|sp|Q5F5X7|RSMG_NEIG1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238693231|sp|B4RR25|RSMG_NEIG2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|59719005|gb|AAW90410.1| putative glucose inhibited division protein B [Neisseria
gonorrhoeae FA 1090]
gi|193935259|gb|ACF31083.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
NCCP11945]
gi|226513709|gb|EEH63054.1| methyltransferase gidB [Neisseria gonorrhoeae 1291]
gi|268547215|gb|EEZ42633.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae 35/02]
gi|268551519|gb|EEZ46538.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae FA19]
gi|268584109|gb|EEZ48785.1| methyltransferase gidB [Neisseria gonorrhoeae MS11]
gi|268586447|gb|EEZ51123.1| methyltransferase gidB [Neisseria gonorrhoeae PID18]
gi|268588709|gb|EEZ53385.1| methyltransferase gidB [Neisseria gonorrhoeae PID1]
gi|268623319|gb|EEZ55719.1| methyltransferase gidB [Neisseria gonorrhoeae PID332]
gi|268623581|gb|EEZ55981.1| methyltransferase gidB [Neisseria gonorrhoeae SK-92-679]
gi|268627748|gb|EEZ60148.1| methyltransferase gidB [Neisseria gonorrhoeae SK-93-1035]
gi|291013264|gb|EFE05230.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae DGI2]
gi|291611413|gb|EFF40483.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae F62]
gi|317165420|gb|ADV08961.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 207
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGPDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FLR ++ +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLRQAAIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DV+++RA A+L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAEL 146
>gi|310659879|ref|YP_003937600.1| glucose-inhibited cell-division methyltransferase [Clostridium
sticklandii DSM 519]
gi|308826657|emb|CBH22695.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Clostridium
sticklandii]
Length = 240
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---IDLGSGGGFPGIITSIQ 92
L+++K +NL + E+ + +H DSL + ++ ID+G+G GFP I I
Sbjct: 33 LLEYNKVMNLTAIEDPEEIYTKHFLDSLSCLLVDELKTVGLKAIDVGTGAGFPSIPIKIM 92
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEA---PQMITTCDVISAR 148
I+ + +++S NK+ +FL+ V + + R ++A P+ D++ +R
Sbjct: 93 RPDIK---MTMLDSLNKRINFLKEVGARVGLDNAEYLHSRAEDAGSNPKYREQYDIVLSR 149
Query: 149 ALADLDTLLEYSFPWL 164
A+A L LLEY P+L
Sbjct: 150 AVASLPVLLEYCSPFL 165
>gi|34496117|ref|NP_900332.1| 16S rRNA methyltransferase GidB [Chromobacterium violaceum ATCC
12472]
gi|55976481|sp|Q7P0A5|RSMG_CHRVO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34101971|gb|AAQ58338.1| glucose inhibited division protein B [Chromobacterium violaceum
ATCC 12472]
Length = 209
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++ +E L+ + L +KW++ NL + E H+ DSL + + +D+G
Sbjct: 18 ELTEPQVELLQRYLALLVKWNQTYNLTAIRQEERMVSYHLLDSLSLVPHLAGGTRMLDVG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGG PGI T+I ++ V L++S +KK +FLR VV + +V R+ EA Q
Sbjct: 78 SGGGMPGIPTAIARPDLQ---VALLDSNHKKTTFLRQVVLELGLPNVQVVTDRV-EAYQP 133
Query: 139 ITTCDVISARALADL 153
D I++RA ++L
Sbjct: 134 EQKFDRITSRAFSEL 148
>gi|313901364|ref|ZP_07834850.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
gi|312953852|gb|EFR35534.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
Length = 236
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSIWIDLG 79
+ L + E + + ++W++KINL + + ++ + +H DS L F + S + D+G
Sbjct: 21 LQEHQLRQFEEYASMLIEWNQKINLTAITDPDEIYEKHFLDSILPSFDMSIQGS-FCDVG 79
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQ 137
+G GFPGI I +E + ++E+ K+ +FL + K +G E A
Sbjct: 80 AGAGFPGIPLKIIYPELE---LTIVETLGKRITFLNALCDKLQLKGVTCVHERAEVYAKD 136
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D++SARA+A+L L E P + ++
Sbjct: 137 HRESFDIVSARAVANLPLLSELCIPLVKKQ 166
>gi|86132587|ref|ZP_01051180.1| glucose inhibited division protein [Dokdonia donghaensis MED134]
gi|85816829|gb|EAQ38014.1| glucose inhibited division protein [Dokdonia donghaensis MED134]
Length = 209
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ +E+ L+ W+ KIN+VS +++ ++RHV SL +V +P SI +
Sbjct: 10 DLTDTQIEQFSKLKDLYQDWNLKINVVSRKDIDEIYLRHVLHSLGIAKVQTFNPGASI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+GGGFPG+ +I + +L++S KK + VV+ K R++
Sbjct: 69 DVGTGGGFPGVPLAILHPEVN---FHLVDSIGKKIKVVNEVVEGLGITNVKTTNDRVENV 125
Query: 136 PQMITTCDVISARALADLDTLLEY 159
P D I +RA+A ++T + +
Sbjct: 126 PGQ---YDFIVSRAVAQMETFVRW 146
>gi|153854264|ref|ZP_01995563.1| hypothetical protein DORLON_01557 [Dorea longicatena DSM 13814]
gi|149753039|gb|EDM62970.1| hypothetical protein DORLON_01557 [Dorea longicatena DSM 13814]
Length = 237
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
++ E E+ + ++ L +W+K +NL + E+ +H DSL + ++ + ID+
Sbjct: 16 ITDEQKEQFDIYHKLLEEWNKVMNLTGITEYEEVVEKHYVDSLSIVKVMNMNHVDTVIDV 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+G GFPG+ I ++ V L++S NK+ FL V+++ R ++ +
Sbjct: 76 GTGAGFPGLPLKIAFPHLK---VTLLDSLNKRIKFLNTVIEELGLEDIHTIHGRAEDYAK 132
Query: 138 MIT---TCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A+L TL EY P++
Sbjct: 133 DAAYREKYDLCVSRAVANLATLSEYCLPYV 162
>gi|78213571|ref|YP_382350.1| methyltransferase GidB [Synechococcus sp. CC9605]
gi|123577673|sp|Q3AHY7|RSMG_SYNSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78198030|gb|ABB35795.1| methyltransferase GidB [Synechococcus sp. CC9605]
Length = 243
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSI 74
+ S+ ++LE L W++++NL +DFWI V DSL Q P
Sbjct: 16 WQPSQAQRDQLEELQGLLQSWNERVNLTRLVNGDDFWIGQVFDSLWPLAGELQSANEPQH 75
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
WID+G+GGGFPG+ +I L + V L++S +K +
Sbjct: 76 WIDVGTGGGFPGLAIAIALPQAQ---VTLLDSVGRKTA 110
>gi|329116883|ref|ZP_08245600.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
gi|326907288|gb|EGE54202.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
Length = 237
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+S+ I +Y + + ETL ++W++KINL + + +++ +++H DS+
Sbjct: 11 ESHQIFLTDYQKDQFKTYLETL----------IEWNQKINLTAITDLDEVYLKHFYDSIA 60
Query: 65 -VFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ Q H P +D+G+G GFP I I ++ V +I+S NK+ +FL + K
Sbjct: 61 PILQGHITNQPIKLLDIGAGAGFPSIPMKIICPELD---VTIIDSLNKRINFLNLLADKL 117
Query: 122 AARGKVF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
F A + D+++ARA+A + L E + P+L
Sbjct: 118 NLTNVHFYHGRAEDFGQDKNFRGQFDIVTARAVARMQVLSELTIPFL 164
>gi|152977681|ref|YP_001377198.1| glucose-inhibited division protein B [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|189039481|sp|A7GVP5|RSMG_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152026433|gb|ABS24203.1| methyltransferase GidB [Bacillus cytotoxicus NVH 391-98]
Length = 239
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D
Sbjct: 16 SLSPRQLEQFEMYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSNPLSICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I ++ V +++S K+ +FL ++ QK F A
Sbjct: 76 VGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D++ ARA+A L L E P +
Sbjct: 133 KKEHVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|58428773|gb|AAW77810.1| glucose inhibited division protein B [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 276
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + RH+ DSL + PY + DLG+G G PGI
Sbjct: 98 YLALLVRWNKTYNLTAVRDPRAMVTRHLLDSL---AMQPYIASGMLADLGTGPGLPGIPL 154
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ R A EA T D ++ARA
Sbjct: 155 AITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPTAYDHLTARA 211
Query: 150 LADLDTL 156
LDTL
Sbjct: 212 ---LDTL 215
>gi|260893977|ref|YP_003240074.1| methyltransferase GidB [Ammonifex degensii KC4]
gi|260866118|gb|ACX53224.1| methyltransferase GidB [Ammonifex degensii KC4]
Length = 241
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFP 85
EK+ + L W ++ +L + E+ I H DSL P P ID+GSG GFP
Sbjct: 28 EKMGRHFALLSLWGRRSSLTAIRGAEEAAILHYLDSLAPLAHLPPPEGPCIDVGSGAGFP 87
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDV 144
G+ ++ L +E L+E+ KK FLR V+++ + + R +E ++ +
Sbjct: 88 GVPLALALPEVE---FVLLEATRKKVEFLRRVIEEISLPNCRAVWGRAEEYGKIAGYRES 144
Query: 145 ---ISARALADLDTLLEYSFPWL 164
+ ARA+A L L EY+ P++
Sbjct: 145 FAWVVARAVAPLRELAEYTLPFV 167
>gi|307243462|ref|ZP_07525618.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
gi|306493186|gb|EFM65183.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
Length = 242
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---IDLGSGG 82
+++ E + + +++++ +NL + + +I+H DS+ +F+ + Y ID+G+G
Sbjct: 27 VDRFEKYRQILVEYNQHMNLTGITEQREVYIKHFLDSVAIFK-NGYIGDGLSVIDVGTGA 85
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQM 138
GFPG+ I +I + L++S NK+ +FL+ V Q+ G + A + P
Sbjct: 86 GFPGLPFKICNPNIR---LTLLDSLNKRINFLKAVGQELGLDGIDYVHGRAEDMAHKPDH 142
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
D+ +ARA+A L LLE P++
Sbjct: 143 REKYDIATARAVASLPVLLELCVPYV 168
>gi|268610512|ref|ZP_06144239.1| 16S rRNA methyltransferase GidB [Ruminococcus flavefaciens FD-1]
Length = 234
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVFQLHPYPSIWI 76
+++ E K + + +++++ +NL + + + +H DS L+ ++ P S+ I
Sbjct: 18 DLTEEMYRKYDIYAECLVEYNRNVNLTAITDPVEILYKHFIDSVLMLKYAEIKPDSSV-I 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR---IQ 133
D+G+G GFP + I S++ + L++S NK+ SFL+ + +K R I
Sbjct: 77 DVGTGAGFPSVPAKIYDDSLK---ITLLDSLNKRISFLQQLCEKLQIDAAFIHGRAEDIA 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ P+ D+ ARA+A++ L EY P++
Sbjct: 134 KLPEYREKFDISCARAVANMSLLSEYCLPFV 164
>gi|320532821|ref|ZP_08033598.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134972|gb|EFW27143.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 171
str. F0337]
Length = 214
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWSRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ R A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDN--VTVRRARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWL 164
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLL 157
>gi|213962694|ref|ZP_03390955.1| 16S rRNA methyltransferase GidB [Capnocytophaga sputigena Capno]
gi|213954689|gb|EEB66010.1| 16S rRNA methyltransferase GidB [Capnocytophaga sputigena Capno]
Length = 205
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 13/136 (9%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L+ KW+ +IN++S ++DF+ RHV SL + Q I +D+G+GGGFPGI +I
Sbjct: 25 LYEKWNAQINVISRKDIDDFYERHVLHSLAIAKCIQFRDGTQI-LDVGTGGGFPGIPLAI 83
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
+ + L++S KK ++ VV K V A +I+ A ++ T D + +RA+
Sbjct: 84 MFPNCQ---FTLVDSIGKKIKVVQEVV-KALKLTNVTAMQIR-AEELKDTYDFVVSRAVT 138
Query: 152 DLDTLLEYSFPWLYQK 167
+ + PW+ K
Sbjct: 139 QMKDFV----PWVKGK 150
>gi|317478821|ref|ZP_07937972.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 4_1_36]
gi|316904997|gb|EFV26800.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 4_1_36]
Length = 206
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E + Y L+L W+ KIN++S +E+ + HV SL +V + P I +
Sbjct: 10 DLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRFRPGTQI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I + +L++S KK + + F R A
Sbjct: 69 DLGTGGGFPGIPLAILFPEV---YFHLVDSIGKKVRVASEIANSIGLKNVTF--RHARAE 123
Query: 137 QMITTCDVISARALADLDTLLE 158
+ D + +RA+ L LL+
Sbjct: 124 EEKGKFDFVVSRAVMPLTDLLK 145
>gi|15676117|ref|NP_273248.1| glucose-inhibited division protein B [Neisseria meningitidis MC58]
gi|20177905|sp|Q9K1G3|RSMG_NEIMB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|7225410|gb|AAF40647.1| glucose inhibited division protein B [Neisseria meningitidis MC58]
gi|325145386|gb|EGC67663.1| methyltransferase GidB [Neisseria meningitidis M01-240013]
gi|325199402|gb|ADY94857.1| methyltransferase GidB [Neisseria meningitidis H44/76]
gi|325205282|gb|ADZ00735.1| methyltransferase GidB [Neisseria meningitidis M04-240196]
Length = 207
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAELADFVSWTVHLL 157
>gi|225848373|ref|YP_002728536.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643342|gb|ACN98392.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 205
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
N+ +S++ +EK E + ++ LKW+K NL S E+ ++H DSL + +L I +
Sbjct: 12 NSIELSKDKIEKFEIYLYMLLKWNKAYNLTSIRKKEEIIVKHFLDSLTLVKLFEAKGIDL 71
Query: 77 ------DLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
D G+G GFPG+ I I+ + LIES KK FL + ++ + V
Sbjct: 72 SGKKVADFGTGAGFPGVPLKIYYQDKID---LYLIESITKKCIFLEMLSKELKLKYTVLC 128
Query: 130 CRIQEAPQMITTCDVISARA 149
R ++ + D++ +RA
Sbjct: 129 KRAEDIQE---KFDIVVSRA 145
>gi|325295305|ref|YP_004281819.1| ribosomal RNA small subunit methyltransferase G [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065753|gb|ADY73760.1| Ribosomal RNA small subunit methyltransferase G [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 208
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVF 66
LR LN ++ + +K E + L KW K+IN+ S + ++ +H DS L+ F
Sbjct: 6 LRELCELNEIDLFEKEYKKFERYRELLKKWGKRINITSILSDKEIEEKHFFDSLLGLKAF 65
Query: 67 QLHPYP---SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+L+ + + D+GSGGGFPG+ +I +I+ +LIES++K+ FL V ++
Sbjct: 66 KLYGFDYHNKLLGDVGSGGGFPGVPLAI---TIQNSTFDLIESRHKRCVFLEQVKRELEL 122
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALAD 152
KV R++ + D++ RA+ D
Sbjct: 123 PNVKVLCTRVESIDR---NYDMLLMRAVED 149
>gi|302388590|ref|YP_003824412.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
gi|302199218|gb|ADL06789.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
Length = 243
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 27/168 (16%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYF-LFLKWSKKINLVSSSTVEDFWIRHVEDSLR-- 64
SI NY +N + Y YF L ++W+K +NL + + +++ +H DSL
Sbjct: 17 SIELKNYQINQF-----------YDYFQLLIEWNKFMNLTAITEMDEVITKHFVDSLSLV 65
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-- 120
V ++ ID+G+G GFPGI I ++ + L++S NK+ +FL + +
Sbjct: 66 KAVKEMRTKNYRIIDVGTGAGFPGIPLKIAFPDLK---ITLMDSLNKRINFLNEAINRLE 122
Query: 121 ----TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A G+ A + P D+ +RA+A+L TL EY P++
Sbjct: 123 LKEIEAIHGR--AEDLGRDPLHREQYDLCLSRAVANLSTLSEYCMPFV 168
>gi|118444066|ref|YP_876981.1| 16S rRNA methyltransferase GidB [Clostridium novyi NT]
gi|189039496|sp|A0PX79|RSMG_CLONN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118134522|gb|ABK61566.1| glucose-inhibited division protein B [Clostridium novyi NT]
Length = 243
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQ 92
L W+ K+NL + + E+ +H DS+++FQ + ID+G+GGGFPGI I
Sbjct: 36 LLKDWNGKVNLTAITEDEEIIKKHFIDSMKIFQFEYLRKANKIIDIGTGGGFPGIPMKIM 95
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAPQMITTCDV 144
+ + L++S K+ + L ++ K R + FA + P+ D
Sbjct: 96 RPDAD---IVLLDSLKKRINVLDDILNKIGINDVETIHGRAEEFA----KNPKYREKFDA 148
Query: 145 ISARALADLDTLLEYSFPWL 164
+ +RA+A+L +L E+ P++
Sbjct: 149 VVSRAVANLASLSEFCLPYV 168
>gi|316985715|gb|EFV64661.1| methyltransferase GidB [Neisseria meningitidis H44/76]
Length = 266
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 66 LRAGIAAMGLDISETAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 125
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 126 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 182
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ + DV+++RA A+L + ++ L
Sbjct: 183 SGRVEAVSDV--RADVVTSRAFAELADFVSWTVHLL 216
>gi|168187285|ref|ZP_02621920.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
gi|169294773|gb|EDS76906.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
Length = 243
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQ 92
L W++K+NL + + E+ +H DS+++FQ + ID+G+GGGFPGI I
Sbjct: 36 LLKDWNEKVNLTAITEDEEIIKKHFIDSMKIFQFEYLRKANKIIDIGTGGGFPGIPIKIM 95
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
+ + L++S K+ + L + V+ R + FA + P+ D
Sbjct: 96 RPDVN---MVLLDSLKKRINVLDDILTNIGINDVESIHGRAEEFA----KNPKYREKFDA 148
Query: 145 ISARALADLDTLLEYSFPWL 164
+ +RA+A+L +L E+ P++
Sbjct: 149 VVSRAVANLASLSEFCLPYV 168
>gi|113477232|ref|YP_723293.1| 16S rRNA methyltransferase GidB [Trichodesmium erythraeum IMS101]
gi|123056302|sp|Q10Y54|RSMG_TRIEI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110168280|gb|ABG52820.1| methyltransferase GidB [Trichodesmium erythraeum IMS101]
Length = 255
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-W------I 76
E ++ + Y L + +KK+NL + E+FW +H+ DSLR + I W I
Sbjct: 27 EQKQQFQKLYELIILGNKKLNLTRITKPEEFWEKHLWDSLRGIKFILENKIHWSEEKKVI 86
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEA 135
D+G+G GFPG++ +I L V L++S KK SF+ ++ + + R+++
Sbjct: 87 DIGTGAGFPGLLVAIILPQYA---VTLLDSTRKKISFIENILTDLNIKNALTITNRVEQI 143
Query: 136 PQMIT---TCDVISARALADLDTLLEYSFPWL 164
++ T D+ RA+A EY+ P L
Sbjct: 144 GRLFKYRETYDIGLLRAVASTVVCAEYALPLL 175
>gi|254805766|ref|YP_003083987.1| glucose inhibited division protein B [Neisseria meningitidis
alpha14]
gi|254669308|emb|CBA08305.1| glucose inhibited division protein B [Neisseria meningitidis
alpha14]
gi|325129108|gb|EGC51957.1| methyltransferase GidB [Neisseria meningitidis N1568]
gi|325133104|gb|EGC55776.1| methyltransferase GidB [Neisseria meningitidis M6190]
gi|325137023|gb|EGC59619.1| methyltransferase GidB [Neisseria meningitidis M0579]
gi|325139082|gb|EGC61628.1| methyltransferase GidB [Neisseria meningitidis ES14902]
gi|325141204|gb|EGC63704.1| methyltransferase GidB [Neisseria meningitidis CU385]
gi|325197477|gb|ADY92933.1| methyltransferase GidB [Neisseria meningitidis G2136]
gi|325203311|gb|ADY98764.1| methyltransferase GidB [Neisseria meningitidis M01-240355]
Length = 207
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAELADFVSWTVHLL 157
>gi|293608265|ref|ZP_06690568.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828838|gb|EFF87200.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122003|gb|ADY81526.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter calcoaceticus PHEA-2]
Length = 210
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D+G
Sbjct: 18 SLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPTGRL-LDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI--QEAP 136
+GGG PG+I I L E V L++S KK FL+ + + V R+ Q+
Sbjct: 77 TGGGMPGMI--IALCQPERSCV-LLDSNGKKIRFLKQFIADLKLKNVVAVQTRVENQDTI 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI++RA A L ++ + P+L+Q
Sbjct: 134 DELGQFDVITSRAFASLTDFVDAAQPYLHQ 163
>gi|257460988|ref|ZP_05626088.1| 16S rRNA methyltransferase GidB [Campylobacter gracilis RM3268]
gi|257441651|gb|EEV16794.1| 16S rRNA methyltransferase GidB [Campylobacter gracilis RM3268]
Length = 192
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+K N V S T D V DSL P YP I D+GSG GFPGI ++ + E
Sbjct: 21 QKFNRVHSLTNYDDLDAVVCDSLSGVNFIPRYPRIACDIGSGAGFPGIFLALAMPLCE-- 78
Query: 100 LVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLE 158
+L E KKA+FL Y V K+ A R+Q+ ++ D+IS+RAL +L+E
Sbjct: 79 -WHLFEPNQKKAAFLTYAKVSLALTNVKIHAERVQDGAKL--RADLISSRALMSAQSLIE 135
>gi|269216518|ref|ZP_06160372.1| 16S rRNA methyltransferase GidB [Slackia exigua ATCC 700122]
gi|269130047|gb|EEZ61129.1| 16S rRNA methyltransferase GidB [Slackia exigua ATCC 700122]
Length = 249
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 10 LRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L A+ + +TY + + E + +E + +K ++K+NL ++ I H+EDSL
Sbjct: 18 LLADTMRSTYGIVIAPEKEKMVEDYLASVIKMNEKLNLTRIVHEQEARILHLEDSLTALP 77
Query: 68 L--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P + DLG+GGGFPGI + ++S L L++S +KK + ++ +V A
Sbjct: 78 LVEDALPGRYADLGTGGGFPGI--PLAIASERPTL--LVDSVSKKIAAVKAMVSDLAWDS 133
Query: 126 KV--FACRIQE-APQMITTCDVISARALADLDTLLEYSFPWL 164
+ +A RI++ A + VI+ARA+ L +L+E + P L
Sbjct: 134 DIAYYAGRIEDLAREERNGFAVITARAVTKLVSLIELASPLL 175
>gi|301163121|emb|CBW22670.1| putative glucose-inhibited cell division protein [Bacteroides
fragilis 638R]
Length = 206
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL RV + S+ +
Sbjct: 10 DLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRFRAGSSV-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 69 DLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q T D + +RA+ L L++
Sbjct: 126 KQ---TFDFVVSRAVMPLADLIK 145
>gi|121634065|ref|YP_974310.1| glucose-inhibited division protein B [Neisseria meningitidis FAM18]
gi|166224599|sp|A1KRM2|RSMG_NEIMF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120865771|emb|CAM09500.1| glucose inhibited division protein B [Neisseria meningitidis FAM18]
Length = 207
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DV+++RA A+L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAEL 146
>gi|260424977|ref|ZP_05733847.2| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
gi|260403779|gb|EEW97326.1| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
Length = 244
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSG 81
+ + K+ + + + S+K+NL E+ ++++ DSL V++ +P +DLG+G
Sbjct: 24 DAVRKMAEYNAMVIAMSRKMNLTGIKDAEESLVKNIYDSLTVYEEKYFPKNGRMLDLGTG 83
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---Q 137
GFPGI +I ++ V L++S KK F+ K + K+ R +E +
Sbjct: 84 AGFPGIPLAILRPDMQ---VVLVDSVLKKLVFIENAAAKLGIKNIKILHIRAEEGGRRRK 140
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
T D+++ARA+ L + E+ P++ +
Sbjct: 141 TRETFDMVTARAVKMLPVIAEWGIPFVKE 169
>gi|237735332|ref|ZP_04565813.1| ribosomal RNA small subunit methyltransferase G [Mollicutes
bacterium D7]
gi|229381077|gb|EEO31168.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
D7]
Length = 233
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLG 79
++ + + + + ++ + ++W++K+NL + + E +++H DSL + F +D+G
Sbjct: 17 LTPQQVNQFKQYFKILVEWNEKMNLTAITDEEGVYLKHFYDSLTIAFDFDFTDQSIVDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQE-APQ 137
+G GFP + I ++ + +++S K+ +FL ++ ++ + + + R ++ A
Sbjct: 77 AGAGFPSVPLKIVYPELK---ITIVDSLTKRITFLNHLFKELNLSNCQAISARAEDYAKD 133
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
CD++ ARA+A L+ L E P +
Sbjct: 134 HRQKCDIVMARAVARLNILDELCLPLV 160
>gi|229153641|ref|ZP_04281817.1| Methyltransferase GidB [Bacillus cereus m1550]
gi|228629827|gb|EEK86480.1| Methyltransferase GidB [Bacillus cereus m1550]
Length = 239
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + + PS D+
Sbjct: 17 LSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPSSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ V +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARA+A L L E P +
Sbjct: 134 KEGVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|289666141|ref|ZP_06487722.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670765|ref|ZP_06491840.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 212
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 34 YLALLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIASGTLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ R A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|322421973|ref|YP_004201196.1| methyltransferase GidB [Geobacter sp. M18]
gi|320128360|gb|ADW15920.1| methyltransferase GidB [Geobacter sp. M18]
Length = 217
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 11 RANYLLNT------YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
RA LLN ++ L L+ F KW++KINL + + E ++H+ DSL
Sbjct: 4 RAKDLLNKGAGELGIELTPAQLNALDLFAEELKKWNRKINLTAITDDEGIAVKHLVDSLS 63
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ++ +D+GSGGGFPGI + +E + +++ KK SF + V+
Sbjct: 64 LLKVVRGGGRLLDIGSGGGFPGIPVKLVQPDLE---IVSVDAVVKKISFQKQAVRLLNLV 120
Query: 125 G-KVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWL 164
G R + A + D + +RA +D+ + +E + P L
Sbjct: 121 GFNAMHVRAETLAADYAASFDWVVSRAFSDIPSFVEMALPVL 162
>gi|169796154|ref|YP_001713947.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AYE]
gi|184157917|ref|YP_001846256.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ACICU]
gi|213157111|ref|YP_002319156.1| methyltransferase GidB [Acinetobacter baumannii AB0057]
gi|215483608|ref|YP_002325829.1| methyltransferase GidB [Acinetobacter baumannii AB307-0294]
gi|239502206|ref|ZP_04661516.1| glucose-inhibited division protein B [Acinetobacter baumannii
AB900]
gi|260555204|ref|ZP_05827425.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
19606]
gi|301345171|ref|ZP_07225912.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB056]
gi|301511291|ref|ZP_07236528.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB058]
gi|301595774|ref|ZP_07240782.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB059]
gi|332872754|ref|ZP_08440720.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6014059]
gi|193806477|sp|B0VCZ6|RSMG_ACIBY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806487|sp|A3M4Y3|RSMG_ACIBT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725347|sp|B7H3N1|RSMG_ACIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725348|sp|B7I508|RSMG_ACIB5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691004|sp|B2HZC3|RSMG_ACIBC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169149081|emb|CAM86958.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter baumannii AYE]
gi|183209511|gb|ACC56909.1| predicted S-adenosylmethionine-dependent methyltransferase
[Acinetobacter baumannii ACICU]
gi|193077185|gb|ABO11977.2| glucose-inhibited division protein B [Acinetobacter baumannii ATCC
17978]
gi|213056271|gb|ACJ41173.1| methyltransferase GidB [Acinetobacter baumannii AB0057]
gi|213988342|gb|ACJ58641.1| methyltransferase GidB [Acinetobacter baumannii AB307-0294]
gi|260411746|gb|EEX05043.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
19606]
gi|322508236|gb|ADX03690.1| Glucose-inhibited division protein B [Acinetobacter baumannii
1656-2]
gi|323517862|gb|ADX92243.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii
TCDC-AB0715]
gi|332739051|gb|EGJ69912.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6014059]
Length = 210
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D+G
Sbjct: 18 SLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRL-LDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI--QEAP 136
+GGG PG+I I L E V L++S KK FL+ + + + R+ Q+
Sbjct: 77 TGGGMPGMI--IALCQPERSCV-LLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQDTI 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DVI++RA A L +E + P+L+++
Sbjct: 134 DELGQFDVITSRAFASLTDFVEAARPYLHEQ 164
>gi|167754940|ref|ZP_02427067.1| hypothetical protein CLORAM_00444 [Clostridium ramosum DSM 1402]
gi|167704990|gb|EDS19569.1| hypothetical protein CLORAM_00444 [Clostridium ramosum DSM 1402]
Length = 233
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLG 79
++ + + + + ++ + ++W++K+NL + + E +++H DSL + F +D+G
Sbjct: 17 LTPQQVNQFKQYFKILVEWNEKMNLTAITDEEGVYLKHFYDSLTIAFDFDFTDQNIVDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQE-APQ 137
+G GFP + I ++ + +++S K+ +FL ++ ++ + + + R ++ A
Sbjct: 77 AGAGFPSVPLKIVYPELK---ITIVDSLTKRITFLNHLFKELNLSNCQAISARAEDYAKD 133
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
CD++ ARA+A L+ L E P +
Sbjct: 134 HRQKCDIVMARAVARLNILDELCLPLV 160
>gi|218767117|ref|YP_002341629.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis Z2491]
gi|20177904|sp|Q9JX38|RSMG_NEIMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121051125|emb|CAM07396.1| glucose inhibited division protein B homolog [Neisseria
meningitidis Z2491]
Length = 207
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DV+++RA A+L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAEL 146
>gi|332851808|ref|ZP_08433733.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013150]
gi|332865812|ref|ZP_08436596.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013113]
gi|332729815|gb|EGJ61150.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013150]
gi|332735024|gb|EGJ66109.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013113]
Length = 210
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D+G
Sbjct: 18 SLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRL-LDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI--QEAP 136
+GGG PG+I I L E V L++S KK FL+ + + + R+ Q+
Sbjct: 77 TGGGMPGMI--IALCQPERSCV-LLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQDTI 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DVI++RA A L +E + P+L+++
Sbjct: 134 DELGQFDVITSRAFASLTDFVEAARPYLHEQ 164
>gi|265763391|ref|ZP_06091959.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_16]
gi|263255999|gb|EEZ27345.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_16]
Length = 225
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL RV + S+ +
Sbjct: 29 DLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRFRAGSSV-M 87
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 88 DLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEE 144
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q T D + +RA+ L L++
Sbjct: 145 KQ---TFDFVVSRAVMPLADLIK 164
>gi|312866384|ref|ZP_07726602.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
gi|311098078|gb|EFQ56304.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
Length = 237
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-W 75
+ +S + + E ++ L + W++KINL + + ++ +++H DS+ V Q L +I
Sbjct: 15 FELSDKQKQDFESYFRLLVDWNQKINLTAITDKDEVYLKHFYDSVAPVLQGLISNNTIKL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACR 131
+D+G+G GFP + I +E V +I+S K+ +FL V ++ G F A
Sbjct: 75 LDIGAGAGFPSLPMKILCPQLE---VTIIDSLKKRINFLEQVAKELGMTGVHFYHGRAED 131
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A + L E + P+L
Sbjct: 132 LGQDKAFRANYDLVTARAVARMQVLSELTIPFL 164
>gi|167766872|ref|ZP_02438925.1| hypothetical protein CLOSS21_01389 [Clostridium sp. SS2/1]
gi|317499287|ref|ZP_07957560.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
gi|167711420|gb|EDS21999.1| hypothetical protein CLOSS21_01389 [Clostridium sp. SS2/1]
gi|291558411|emb|CBL37211.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SSC/2]
gi|316893456|gb|EFV15665.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
Length = 236
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWID 77
+S LE+ E +Y + ++ +K +NL + + + +H DSL + + + +D
Sbjct: 14 KLSDHQLEQFETYYEMLVEKNKVMNLTAITEKNEVIDKHFADSLALIKSGVSLTGQKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKV--FA 129
+G+G GFPGI I +E + L++S NK+ FL V++ TA G+ FA
Sbjct: 74 IGTGAGFPGIPLKIAFPELE---IVLLDSLNKRIKFLNEVIEALGLEKITAIHGRAEDFA 130
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + Q D + +RA+A+L L EY P++ +
Sbjct: 131 KQKEYREQF----DYVVSRAVANLTVLSEYCLPYVKE 163
>gi|325135116|gb|EGC57743.1| methyltransferase GidB [Neisseria meningitidis M13399]
Length = 207
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISEMAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAELADFVSWTVHLL 157
>gi|166710246|ref|ZP_02241453.1| glucose-inhibited division protein B [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 212
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + RH+ DSL + PY + DLG+G G PGI
Sbjct: 34 YLALLVRWNKTYNLTAVRDPRAMVTRHLLDSL---AMQPYIASGMLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ R A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDAPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|322807965|emb|CBZ05540.1| 16s rRNAmethyltransferase GidA [Clostridium botulinum H04402 065]
Length = 239
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L +W+KKINL + ++ +H D +++F+ P ID+G+G GFPGI I
Sbjct: 32 LIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKSSPIGEAKSLIDIGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
IE + L++S K+ +FL V +Q R + +A IQ + +
Sbjct: 92 KEDIE---ITLLDSLQKRINFLNIVIGELQLKNIQCLHGRAEDYAQEIQHRQKY----GI 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+A+L L E+ P++
Sbjct: 145 AVSRAVANLAVLSEFCIPFV 164
>gi|319639611|ref|ZP_07994358.1| ribosomal RNA small subunit methyltransferase G [Neisseria mucosa
C102]
gi|317399182|gb|EFV79856.1| ribosomal RNA small subunit methyltransferase G [Neisseria mucosa
C102]
Length = 209
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL + L KW+K NL + H+ DSL + + +D+GSGGG PGI
Sbjct: 25 KLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLSYIEHAQTMLDVGSGGGQPGI 84
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
T+I ++ + L+++ KK +FL+ V + + +V + R++ A T DVI+
Sbjct: 85 PTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVISGRVEAAADCRT--DVIT 139
Query: 147 ARALADL 153
+RA A+L
Sbjct: 140 SRAFAEL 146
>gi|260436464|ref|ZP_05790434.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8109]
gi|260414338|gb|EEX07634.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8109]
Length = 243
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSI 74
+ SR ++L L W++++NL +DFWI V DSL Q P
Sbjct: 16 WQPSRAQRDQLVELQGLLHSWNERVNLTRLVNGDDFWIGQVFDSLWPLAGELQSADEPQN 75
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVFACRI 132
WID+G+GGGFPG+ +I L + V L++S +K + + + A R +V RI
Sbjct: 76 WIDVGTGGGFPGLAIAIALPQAQ---VTLLDSVGRKTAAVEAMASSLGLADRVRVRTERI 132
Query: 133 Q 133
+
Sbjct: 133 E 133
>gi|33241078|ref|NP_876020.1| phosphoribulokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|55976488|sp|Q7VA38|RSMG_PROMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33238607|gb|AAQ00673.1| Phosphoribulokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 253
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSI 74
+ S + LE+ +L +W++KINL DFWI + DSL Q
Sbjct: 20 WEPSPQQLEQFNQLQYLLREWNQKINLTRLIEGNDFWISQILDSLWPIQDELKFQDKQIN 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--ARGKVFACRI 132
ID+G+G G PG+ +I L LI+S +K S ++ +V++ +R V RI
Sbjct: 80 IIDVGTGCGLPGLAVAIALPR---SSTTLIDSIYRKTSAVKEIVKELGLLSRVNVLTERI 136
Query: 133 QEAPQMI---TTCDVISARALADLDTLLEYSFPWL 164
+ Q T D+ ARA+A L EY P+L
Sbjct: 137 ELTGQKKLHRHTFDLAIARAVAKAPVLAEYLIPFL 171
>gi|298377550|ref|ZP_06987502.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_19]
gi|301311210|ref|ZP_07217138.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 20_3]
gi|298265569|gb|EFI07230.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_19]
gi|300830784|gb|EFK61426.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 20_3]
Length = 230
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 8 SILRANY-LLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
SIL + + +L +Y +++ E+ Y L+ W+ KIN++S +E+ + HV SL
Sbjct: 19 SILNSQFSILTSYFPDLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLG 78
Query: 65 V---FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + P S+ +DLG+GGGFPGI +I +L++S KK + V +
Sbjct: 79 ITDMLRFKPGSSV-MDLGTGGGFPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAI 134
Query: 122 AARGKVF-ACRIQEAPQMITTCDVISARALADLDTLLE 158
F CR +E Q+ D + +RA+ L L++
Sbjct: 135 GLENVSFRHCRGEEEKQLF---DFVVSRAVMPLADLVK 169
>gi|197120415|ref|YP_002140842.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter bemidjiensis
Bem]
gi|197089775|gb|ACH41046.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter bemidjiensis
Bem]
Length = 217
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE L F KW++KINL + + ED ++H+ DSL + + P +D+GSGGGFP
Sbjct: 25 LESLNLFAEELKKWNRKINLTAITGDEDIALKHLVDSLSLLKAVRCPGRLLDIGSGGGFP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCD 143
I I +E +V+ +++ KK SF + V+ G R + A + + D
Sbjct: 85 CIPVKIVQPDLE--MVS-VDAVVKKISFQKQAVRLLNLTGFTALHVRAETLAQEYGASFD 141
Query: 144 VISARALADLDTLLEYSFPWL 164
+ +RA +D+ + + + P L
Sbjct: 142 WVVSRAFSDIPSFVAMALPVL 162
>gi|283768650|ref|ZP_06341562.1| 16S rRNA methyltransferase GidB [Bulleidia extructa W1219]
gi|283105042|gb|EFC06414.1| 16S rRNA methyltransferase GidB [Bulleidia extructa W1219]
Length = 229
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+E + + L +W++++NL + + ++ +H D + W D+GSG GFP
Sbjct: 19 IESFQRYASLLQEWNERMNLTAITEEKEIIEKHFLDCILPLHHSVIQGHWADVGSGAGFP 78
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMI-TTCD 143
G++ I +E + LIE K+ FLR+V+ + + KV R ++ ++ D
Sbjct: 79 GLVWKIMKPELE---MTLIEPTGKRCQFLRHVINELQLEKIKVVNERAEDYAKLHREEFD 135
Query: 144 VISARALADLDTLLEYSFPWL 164
++ARA+++L L E P +
Sbjct: 136 GVTARAVSNLPLLSELCIPLI 156
>gi|117929363|ref|YP_873914.1| methyltransferase GidB [Acidothermus cellulolyticus 11B]
gi|166224340|sp|A0LWW8|RSMG_ACIC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117649826|gb|ABK53928.1| 16S rRNA m(7)G-527 methyltransferase [Acidothermus cellulolyticus
11B]
Length = 222
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + V+ W RH+ + + L P ID+GSG G PGI+ ++ +E V L
Sbjct: 38 GLIGPAEVDRLWERHIANCAALAPLIPVDQRVIDVGSGAGLPGIVLALARPDLE---VLL 94
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLE 158
IE+ +++ +FLR VV R A + T V++ARA+A L L++
Sbjct: 95 IEAMSRRTAFLREVVADLGLRD--VTVENSRAENVACTAPVVTARAVAPLPRLVK 147
>gi|319790633|ref|YP_004152266.1| methyltransferase GidB [Thermovibrio ammonificans HB-1]
gi|317115135|gb|ADU97625.1| methyltransferase GidB [Thermovibrio ammonificans HB-1]
Length = 208
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI--RHVEDSLRVFQ 67
LR LN + E +KLE F L KW ++INL +S ++D I +H+ DSL +
Sbjct: 4 LRELCTLNGIELKEEHYQKLELFKELLKKWGRRINL--TSLLDDTQIEEKHLFDSLLGLK 61
Query: 68 LHPYPSIWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
I + D+GSGGGFPG+ ++ L + + L+E + K+ FL V ++
Sbjct: 62 AFKEAGINVENASICDVGSGGGFPGVPLAVALENAD---FTLVEPRKKRCVFLEEVKRRL 118
Query: 122 AARGKVFAC-RIQEAPQMITTCDVISARALAD 152
+ AC RI++ ++++ RA+ D
Sbjct: 119 NLKNVKVACSRIEDVSGPF---NLLTMRAVED 147
>gi|317484736|ref|ZP_07943636.1| 16S rRNA methyltransferase GidB [Bilophila wadsworthia 3_1_6]
gi|316923988|gb|EFV45174.1| 16S rRNA methyltransferase GidB [Bilophila wadsworthia 3_1_6]
Length = 224
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-------FQLHPY 71
+ ++ ETL L + L ++W++ +NLV + T ED + V DSL + +
Sbjct: 20 FELTEETLPPLAGYLGLLIQWNRVMNLVGTRTAEDTFFTLVVDSLHLGRFLREDVEYSAA 79
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
P W DLGSG G PG+ +++ EG ++E++ K+A FL V+ K G VF
Sbjct: 80 PCCW-DLGSGAGLPGL--PLRMIWQEGDYW-MVEAREKRALFLSTVLAKYPLPGTHVFRG 135
Query: 131 RIQE--APQMITTCDVISARALADLDTLLE 158
R + A T D+I +RA +LE
Sbjct: 136 RAEAFMAGPPARTADLIVSRAFMPWPGVLE 165
>gi|227511970|ref|ZP_03942019.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
gi|227084778|gb|EEI20090.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
Length = 244
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-- 64
N++L N V+ + L + + ++ L ++ ++ +NL + + + +++H DS+
Sbjct: 8 NALLEQNI-----QVTDDQLGQFDAYFKLLVRTNEHVNLTTITEKSEVYLKHFYDSITPA 62
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-- 120
V Q+ P D+G+G GFP I I ++ + +++S NK+ +FL +VQ+
Sbjct: 63 FFVSQIREQPVSLCDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRINFLTELVQQLN 119
Query: 121 ------TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
AR + F + + Q + D+++ARA+A L L E P +
Sbjct: 120 LKDVTLAHARAEEFGNKKSVSRQ---SFDIVTARAVARLGVLSELCLPLV 166
>gi|71275823|ref|ZP_00652107.1| Glucose inhibited division protein [Xylella fastidiosa Dixon]
gi|71902298|ref|ZP_00684288.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|170730196|ref|YP_001775629.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa M12]
gi|71163401|gb|EAO13119.1| Glucose inhibited division protein [Xylella fastidiosa Dixon]
gi|71727951|gb|EAO30174.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|167964989|gb|ACA11999.1| glucose inhibited division protein [Xylella fastidiosa M12]
Length = 238
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + Q +
Sbjct: 42 YGLDILELDRAYVVPLLAYLALLIRWNRTYNLTAIRDPREMVVRHLLDSLAI-QRYVTVG 100
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
DLGSG G PGI +I ++ V L+ES KKA FLR VV++ +
Sbjct: 101 RLADLGSGPGLPGIPLAISCPPLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEVRA 157
Query: 134 EAPQMITTCDVISARALADLDTLL 157
EA + ++ARAL L+ ++
Sbjct: 158 EALDEALMYEHLTARALDTLNGIV 181
>gi|300791160|ref|YP_003771451.1| glucose inhibited division protein B [Amycolatopsis mediterranei
U32]
gi|299800674|gb|ADJ51049.1| glucose inhibited division protein B [Amycolatopsis mediterranei
U32]
Length = 227
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +++ + L + + L+ VE W RHV +S + + P + +D+GSG G
Sbjct: 20 ERVDQAAGYVELLERHGIERGLIGPREVERLWERHVLNSAVIGEQMPPGARVVDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PG+ +I ++ + L+E ++ +L V +K + R +E P + +
Sbjct: 80 LPGVPLAIARPDLD---IVLLEPMARRVDWLAEVAEKLELPIAIIRGRAEEPPVREQLGG 136
Query: 142 CDVISARALADLDTLLEYSFP 162
D+++ARA+A L L ++ P
Sbjct: 137 ADIVTARAVAPLARLADWCLP 157
>gi|260584386|ref|ZP_05852133.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
gi|260157904|gb|EEW92973.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
Length = 237
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFP 85
++ ++ L ++W++K+NL + + E +++H DSL + F D+G+G GFP
Sbjct: 24 KQFHQYFQLLVEWNEKMNLTAITDEEGVYLKHFYDSLALGFHHELSNQTLCDVGAGAGFP 83
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITT 141
I I ++ V +++S NK+ +FL +V+ + F R + Q +
Sbjct: 84 SIPLKIVFPDLK---VTIVDSLNKRITFLNTLVETLGLTDVQCFHDRAETFGQNKNFRAS 140
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A L L E+ P + ++
Sbjct: 141 YDVVTARAVAKLSVLSEFCMPLVKKQ 166
>gi|325265451|ref|ZP_08132174.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
gi|324029309|gb|EGB90601.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
Length = 237
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
++ + +Y L +W+K +NL + ++ +H DSL + + +I ID+G+G GF
Sbjct: 22 QQFQRYYELLTEWNKVMNLTGITDYDEVNEKHFVDSLSIVKAVDIENIKTVIDIGTGAGF 81
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAP 136
PG+ I + V L++S NK+ FL V+++ R + +A +
Sbjct: 82 PGLPLKIVYPQLH---VVLLDSLNKRVKFLNTVIEELKLDDIETLHGRAEDYARQTNYRE 138
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
Q D+ +RA+A+L TL EY P++
Sbjct: 139 QF----DLCVSRAVANLSTLSEYCLPYI 162
>gi|227524955|ref|ZP_03955004.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
gi|227087867|gb|EEI23179.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
Length = 244
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 23/170 (13%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-- 64
N++L N V+ + L + + ++ L ++ ++ +NL + + + +++H DS+
Sbjct: 8 NALLEQNI-----QVTDDQLGQFDAYFKLLVRTNEHVNLTTITEKSEVYLKHFYDSITPA 62
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-- 120
V Q+ P D+G+G GFP I I ++ + +++S NK+ +FL +VQ+
Sbjct: 63 FFVSQIREQPVSLCDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRINFLTELVQQLN 119
Query: 121 ------TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
AR + F + + Q + D+++ARA+A L L E P +
Sbjct: 120 LKDVTLVHARAEEFGNKKSVSRQ---SFDIVTARAVARLGVLSELCLPLV 166
>gi|298208053|ref|YP_003716232.1| glucose-inhibited division protein [Croceibacter atlanticus
HTCC2559]
gi|83850694|gb|EAP88562.1| glucose-inhibited division protein [Croceibacter atlanticus
HTCC2559]
Length = 209
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGG 83
LE+ L+ W++KIN+VS +++ + RHV SL + ++ + + +D+G+GGG
Sbjct: 16 LEQFSKIGDLYKDWNQKINVVSRKDIDEIYSRHVLHSLGIAKVMSFKDGAKVMDVGTGGG 75
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
FPGI +I ++ +L++S KK + VV+ K R++E + T
Sbjct: 76 FPGIPLAILFPEVQ---FHLVDSIGKKIKVVDEVVEGLGLTNVKTSHSRVEE---INDTY 129
Query: 143 DVISARALADLDTL 156
D I +RA+A ++T
Sbjct: 130 DFIVSRAVAHMETF 143
>gi|329944748|ref|ZP_08292827.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 170
str. F0386]
gi|328529884|gb|EGF56774.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 170
str. F0386]
Length = 214
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPG++
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWSRHIVNSAAVVPFLPARGSVADVGSGAGFPGVVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ R A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDN--VTIRRARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWL 164
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLL 157
>gi|148266436|ref|YP_001233142.1| methyltransferase GidB [Geobacter uraniireducens Rf4]
gi|189039394|sp|A5G9V1|RSMG_GEOUR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146399936|gb|ABQ28569.1| 16S rRNA m(7)G-527 methyltransferase [Geobacter uraniireducens Rf4]
Length = 219
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KWSKKINL + T E+ ++H DSL + ++ +D+GSGGGFP I I L +
Sbjct: 37 KWSKKINLTAIKTDEEIALKHFVDSLTLAKVVKNKGRLLDIGSGGGFPAIPLKIVLHDLH 96
Query: 98 GGLVNLIESKNKKASFLRYVV--------QKTAARGKVFACRIQEAPQMITTCDVISARA 149
V +++ KK F R+V + RG+ A A Q D I +RA
Sbjct: 97 ---VMSVDAVEKKVIFQRHVARLLHLHDFEAVHVRGEELAK--SHAGQF----DWIVSRA 147
Query: 150 LADLDTLLEYSFPWL 164
+D+ T + P L
Sbjct: 148 FSDIPTFAAMTLPLL 162
>gi|229176158|ref|ZP_04303650.1| Methyltransferase GidB [Bacillus cereus MM3]
gi|228607317|gb|EEK64647.1| Methyltransferase GidB [Bacillus cereus MM3]
Length = 239
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSEPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-----IQ 133
G+G GFP I I ++ V +++S K+ +FL ++ QK G V C
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLEL-GDVAFCHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D++ ARA+A L L E P +
Sbjct: 133 KKEGVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|60681565|ref|YP_211709.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis NCTC 9343]
gi|81315369|sp|Q5LDN0|RSMG_BACFN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|60492999|emb|CAH07778.1| putative glucose-inhibited cell division protein [Bacteroides
fragilis NCTC 9343]
Length = 206
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL R+ + S+ +
Sbjct: 10 DLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARIIRFRAGSSV-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 69 DLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q T D + +RA+ L L++
Sbjct: 126 KQ---TFDFVVSRAVMPLADLIK 145
>gi|149279363|ref|ZP_01885494.1| glucose-inhibited division protein B [Pedobacter sp. BAL39]
gi|149229889|gb|EDM35277.1| glucose-inhibited division protein B [Pedobacter sp. BAL39]
Length = 210
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 17/153 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWI 76
+++ + LE+ Y L+ W+ +IN++S +++ +IRHV SL + + P ++ +
Sbjct: 14 DLTAQQLEQFGQLYELYSFWNAQINVISRKDIDELYIRHVLHSLGIAKFCSFKPGETV-L 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQE 134
D+G+GGGFPGI +I + LV+ I K ++ V + A G V A ++
Sbjct: 73 DVGTGGGFPGIPLAILFPETQFHLVDSIGKK------IKVVTEVAAGLGLNNVKASHLR- 125
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q++ D + +RA+ L +PW+ K
Sbjct: 126 AEQVMEKYDFVVSRAVTRLIDF----YPWVKGK 154
>gi|291165907|gb|EFE27954.1| 16S rRNA methyltransferase GidB [Filifactor alocis ATCC 35896]
Length = 237
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N+IL+ L ++ + + L+ +K +NL + + + + +H DSL
Sbjct: 3 NTILKDGLALWNQQITEQQEFDFHIYMQHLLEKNKVMNLTNITEENEIYTKHFLDSLSCL 62
Query: 67 QLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ----- 119
++P P S ID+G+G GFP + I ++ + L++S NK+ +FL+ V +
Sbjct: 63 SVYPIPKNSTVIDIGTGAGFPSVPIKIMRRDLK---MTLLDSLNKRINFLKEVGEVLHFE 119
Query: 120 -KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
T G+ A + + + D +RA+A L LLEY+ P+L
Sbjct: 120 DMTYLHGR--AEDLAQKAEYRQMYDFAVSRAVASLPVLLEYTIPFL 163
>gi|212695075|ref|ZP_03303203.1| hypothetical protein BACDOR_04613 [Bacteroides dorei DSM 17855]
gi|237710519|ref|ZP_04541000.1| glucose-inhibited division protein B [Bacteroides sp. 9_1_42FAA]
gi|237727016|ref|ZP_04557497.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D4]
gi|265750295|ref|ZP_06086358.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_33FAA]
gi|212662391|gb|EEB22965.1| hypothetical protein BACDOR_04613 [Bacteroides dorei DSM 17855]
gi|229433872|gb|EEO43949.1| ribosomal RNA small subunit methyltransferase G [Bacteroides dorei
5_1_36/D4]
gi|229455241|gb|EEO60962.1| glucose-inhibited division protein B [Bacteroides sp. 9_1_42FAA]
gi|263237191|gb|EEZ22641.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_33FAA]
Length = 208
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N+S + + Y L+ W+ KIN++S + + + HV SL +V P I +
Sbjct: 10 NLSEQQKTQFAALYDLYTDWNSKINVISRKDIANLYEHHVLHSLGIAKVINFTPDTQI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I ++ +L++S KK V + F CR +E
Sbjct: 69 DLGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVKVATEVANAIGLKNVTFRHCRAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
+ D + +RA+ L L++
Sbjct: 126 KRKF---DFVVSRAVMPLGDLIK 145
>gi|167759569|ref|ZP_02431696.1| hypothetical protein CLOSCI_01926 [Clostridium scindens ATCC 35704]
gi|167662796|gb|EDS06926.1| hypothetical protein CLOSCI_01926 [Clostridium scindens ATCC 35704]
Length = 237
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIIT 89
FY L ++W+K +NL + + +H DSL + ++ ++ ID+G+G GFPGI
Sbjct: 27 FYQLLVEWNKVMNLTGITEYGEVVEKHFVDSLSLVEVLDLENVNHVIDVGTGAGFPGIPL 86
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI---TTCDVI 145
I + + L++S NK+ FL V+++ + R ++ + D+
Sbjct: 87 KIAFPHLR---ITLLDSLNKRIKFLDTVIKELGLKDIHTIHGRAEDYARQAEYREKYDLC 143
Query: 146 SARALADLDTLLEYSFPWL 164
+RA+A+L TL EY P++
Sbjct: 144 VSRAVANLATLSEYCLPYI 162
>gi|329925034|ref|ZP_08279978.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
gi|328940153|gb|EGG36485.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
Length = 240
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+ + L + E +Y + ++W++K+NL + E + +H DS+ + I D+
Sbjct: 19 IDEKQLHQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSITLAFYVDMNKIGNLADI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ 137
GSG GFPGI I ++ + +++S NK+ +FL++V + ++ R +E +
Sbjct: 79 GSGAGFPGIPLKICFPHLK---LTIVDSLNKRITFLKHVADTLGLSEVELIHGRAEEVAR 135
Query: 138 MI---TTCDVISARALADLDTLLEYSFPW 163
D+++ARA+A + L E+ P+
Sbjct: 136 KHGYRDGFDLVTARAVARMAVLNEFCLPF 164
>gi|225011500|ref|ZP_03701938.1| methyltransferase GidB [Flavobacteria bacterium MS024-2A]
gi|225004003|gb|EEG41975.1| methyltransferase GidB [Flavobacteria bacterium MS024-2A]
Length = 215
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N+S + L + + L+ W+ KINL+S ++ F+ RHV SL +V + P + +
Sbjct: 20 NISEQQLNQFKLLAPLYEDWNTKINLISRKDMDSFFERHVLHSLGIAKVMEFLPQAKV-L 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAARGKVFACRIQEA 135
D+G+GGGFPGI +I L++ I K K + V++ K + + A E
Sbjct: 79 DVGTGGGFPGIPLAILFPETHFFLIDSIGKKIKVVQEVSNVLKLKNVSSAHIRAEDFSE- 137
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
D + +RA+ ++T + PW+
Sbjct: 138 -----KIDFVVSRAVTKMETFV----PWV 157
>gi|159904136|ref|YP_001551480.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9211]
gi|159889312|gb|ABX09526.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9211]
Length = 236
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 22/150 (14%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSIW--IDLGSGGGFPGIITSIQ 92
++W++K+NL DFWI HV DSL ++L+ + S ID+G+G GFPG+ +I
Sbjct: 21 IEWNEKVNLTRLLKGSDFWISHVLDSLWPLRYELNHFESSRKIIDVGTGCGFPGLAIAIA 80
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP---QMIT---TCDVIS 146
L E + LI+S ++K + ++ + Q T G+ + R + A Q I+ D+
Sbjct: 81 LPRSE---ITLIDSISRKTTAVKAISQ-TLGLGERVSVRTERAEVIGQSISFRGNYDLAV 136
Query: 147 ARALADLDTLLEYSFP--------WLYQKK 168
ARA+A + EY P WLY+ +
Sbjct: 137 ARAVATSPVVAEYLIPLLNAQGEAWLYKGR 166
>gi|114568074|ref|YP_755228.1| methyltransferase GidB [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317085|sp|Q0ATU7|RSMG_SYNWW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114339009|gb|ABI69857.1| methyltransferase GidB [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 214
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPGIITS 90
F + ++ + + NLVS ++ +H+EDS + S +D+GSG GFPG++ +
Sbjct: 8 FKEMLIEENSRHNLVSRKSLPVELEKHIEDSRSLLNFMDLKGSRVVDIGSGAGFPGLVLA 67
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA--PQMITTCDVISA 147
I EG + L+ES KK FL+ V+ + + +V RI+E ++ + D S
Sbjct: 68 IYCP--EGEFL-LLESDLKKTEFLQAVINRCGLKNCQVLRKRIEEVGRSELRNSFDFCSC 124
Query: 148 RALADLDTLLEY 159
RALA ++ +LEY
Sbjct: 125 RALAMMNIVLEY 136
>gi|228994201|ref|ZP_04154101.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
gi|228765653|gb|EEM14307.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
Length = 239
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + + P D
Sbjct: 16 NLSPRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYNDFSKPFSICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I ++ V +++S K+ +FL ++ QK F A
Sbjct: 76 VGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D++ ARA+A L L E P +
Sbjct: 133 KKEGVRESFDIVMARAVARLSVLSELCLPLV 163
>gi|312888273|ref|ZP_07747849.1| 16S rRNA m(7)G-527 methyltransferase [Mucilaginibacter paludis DSM
18603]
gi|311299107|gb|EFQ76200.1| 16S rRNA m(7)G-527 methyltransferase [Mucilaginibacter paludis DSM
18603]
Length = 208
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWI-DLGSGGGFPGIITSIQ 92
L++ W+ +IN++S ++ + RHV SL + ++ P+ P + D+G+GGGFPGI +I
Sbjct: 27 LYIHWNNQINVISRKDIDLLFERHVLHSLGIAKVMPFLPGEQVLDVGTGGGFPGIPLAIM 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQEAPQMITTCDVISAR 148
E LV+ I K ++ V + AA G K R +E P D + +R
Sbjct: 87 FPETEFHLVDSIGKK------IKVVTEVAAALGLQNVKASHNRAEEIP---GKFDFVVSR 137
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+ L +PW+ K
Sbjct: 138 AVTQLKDF----YPWVKDK 152
>gi|325679062|ref|ZP_08158656.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
gi|324109186|gb|EGC03408.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
Length = 233
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SI 74
N ++ E +L+ + + + ++ +NL + + E +H DS+ F L P +
Sbjct: 10 NGIALTAEQTGRLDKYAEMLCERNEHVNLTAITDPEGIAEKHFFDSIYPFTLFELPQGAS 69
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+G+G GFP + I + L++S NK+ +FL+ + + K R +E
Sbjct: 70 LIDVGTGAGFPSCPLKVFRDDIS---LTLLDSLNKRVNFLQGISDALSLDAKCVHGRAEE 126
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWL 164
P D+ +ARA+A+L L EY P++
Sbjct: 127 FGKKPDYREQFDIATARAVANLRDLCEYCLPFV 159
>gi|83596028|gb|ABC25386.1| methyltransferase [uncultured marine bacterium Ant39E11]
Length = 218
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+++E +E+L+ L+ +W+ +IN++S +E W RH+ SL + P ++ +D
Sbjct: 17 LTKEAIEQLQRLPNLYKEWNSRINVISRKDMELLWERHIFHSLTLGLAADFQPDMNV-LD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
LG+GGGFPGI +I S++ L +S KK ++ V + A + RI+
Sbjct: 76 LGTGGGFPGIPLAIAFPSVQ---WTLNDSMAKKIRVVQAVSEAMAIPNISAYHGRIE--- 129
Query: 137 QMITTCDVISARALADLDTLLEYS 160
++ D + RA+A LL ++
Sbjct: 130 KLKGPWDAVVTRAVAPASQLLTWT 153
>gi|53713316|ref|YP_099308.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis YCH46]
gi|253565295|ref|ZP_04842750.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_2_5]
gi|81608504|sp|Q64UQ5|RSMG_BACFR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52216181|dbj|BAD48774.1| glucose-inhibited division protein [Bacteroides fragilis YCH46]
gi|251945574|gb|EES85981.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_2_5]
Length = 224
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL R+ + S+ +
Sbjct: 28 DLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARIIRFRAGSSV-M 86
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 87 DLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEE 143
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q T D + +RA+ L L++
Sbjct: 144 KQ---TFDFVVSRAVMPLADLIK 163
>gi|304388996|ref|ZP_07371043.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis ATCC 13091]
gi|304337130|gb|EFM03317.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis ATCC 13091]
Length = 207
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRLDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAELADFVSWTVHLL 157
>gi|49484905|ref|YP_042129.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA252]
gi|221141511|ref|ZP_03566004.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|257424192|ref|ZP_05600621.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257426869|ref|ZP_05603271.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257432152|ref|ZP_05608515.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257435113|ref|ZP_05611164.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|282907043|ref|ZP_06314891.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282910022|ref|ZP_06317830.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282912910|ref|ZP_06320702.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282922538|ref|ZP_06330228.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|283959480|ref|ZP_06376921.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293497963|ref|ZP_06665817.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511553|ref|ZP_06670247.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|293550162|ref|ZP_06672834.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|295429293|ref|ZP_06821915.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589205|ref|ZP_06947846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|304379944|ref|ZP_07362673.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|55976401|sp|Q6GD94|RSMG_STAAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49243034|emb|CAG41768.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257273210|gb|EEV05312.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257276500|gb|EEV07951.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257283031|gb|EEV13163.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257285709|gb|EEV15825.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|269942296|emb|CBI50711.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus TW20]
gi|282314759|gb|EFB45145.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|282323010|gb|EFB53329.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282326088|gb|EFB56393.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329942|gb|EFB59463.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|283789072|gb|EFC27899.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919209|gb|EFD96285.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|291096894|gb|EFE27152.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465511|gb|EFF08043.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|295127052|gb|EFG56696.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577716|gb|EFH96429.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|302752587|gb|ADL66764.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304341524|gb|EFM07434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315195222|gb|EFU25610.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS00]
gi|329315430|gb|AEB89843.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus T0131]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL Y+ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNYLASELQLQDVSFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV++ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVTARAVARLSVLSELCLPLV 162
>gi|332308609|ref|YP_004436460.1| methyltransferase GidB [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175938|gb|AEE25192.1| methyltransferase GidB [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 215
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VS E + KL F L KW+K NL S E I+H+ DS+ V H S +
Sbjct: 18 LTDLQVSEEQISKLVGFVQLIHKWNKAYNLTSVRDPESMLIKHIMDSI-VVAPHLQQSHY 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
ID+G+G G PGI +I L L++S K+ F++ V
Sbjct: 77 IDVGTGPGLPGIPLAIMLPQTH---FTLLDSLGKRVRFMKQV 115
>gi|291532560|emb|CBL05673.1| 16S rRNA methyltransferase GidB [Megamonas hypermegale ART12/1]
Length = 143
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIIT 89
+Y L ++W++KINL + + + I+H+ DSL +Q + ID+G+G GFPG+
Sbjct: 29 YYELLVEWNEKINLTAITEPREVAIKHIVDSLSCYQKELFTGQVSLIDVGTGAGFPGLPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
I ++ + L++S NK+ FL+ VV + + +V R +EA +
Sbjct: 89 KIFCPELK---LTLLDSLNKRVKFLQLVVDELGLKDVEVIHARSEEAAR 134
>gi|56554498|pdb|1XDZ|A Chain A, Crystal Structure Of Gram_positive Bacillus Subtilis
Glucose Inhibited Division Protein B (Gidb), Structural
Genomics, Mcsg
Length = 240
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ + + D
Sbjct: 17 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFNQVNTICD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I + V +++S NK+ +FL + + F A
Sbjct: 77 VGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFG 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D+++ARA+A L L E P +
Sbjct: 134 QRKDVRESYDIVTARAVARLSVLSELCLPLV 164
>gi|325917484|ref|ZP_08179690.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas vesicatoria ATCC
35937]
gi|325536278|gb|EGD08068.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas vesicatoria ATCC
35937]
Length = 212
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 34 YLALLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIASGTLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ A A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLALDNARVAESRAEALDEPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|16081152|ref|NP_391980.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312083|ref|ZP_03593930.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316408|ref|ZP_03598213.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321321|ref|ZP_03602615.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325604|ref|ZP_03606898.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. SMY]
gi|121190|sp|P25813|RSMG_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|40027|emb|CAA44405.1| unnamed protein product [Bacillus subtilis]
gi|467384|dbj|BAA05230.1| unknown [Bacillus subtilis]
gi|2636647|emb|CAB16137.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. subtilis str. 168]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ + + D
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFNQVNTICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I + V +++S NK+ +FL + + F A
Sbjct: 76 VGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D+++ARA+A L L E P +
Sbjct: 133 QRKDVRESYDIVTARAVARLSVLSELCLPLV 163
>gi|116512182|ref|YP_809398.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
cremoris SK11]
gi|123125536|sp|Q02YJ6|RSMG_LACLS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116107836|gb|ABJ72976.1| 16S rRNA m(7)G-527 methyltransferase [Lactococcus lactis subsp.
cremoris SK11]
Length = 238
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWID 77
+S + +++ E ++ L ++W++KINL + + + +++H DS+ + P +D
Sbjct: 17 LSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVAPILYGLITDQPVSILD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFP + I +E V +I+S NK+ +FL + ++ + R ++
Sbjct: 77 IGAGAGFPSLPMKIIFPELE---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAEDFG 133
Query: 137 Q---MITTCDVISARALADLDTLLEYSFPWL 164
Q T D ++ARA+A L L E++ +L
Sbjct: 134 QDSNYRATFDFVTARAVARLSVLSEFTISFL 164
>gi|269217842|ref|ZP_06161696.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212777|gb|EEZ79117.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 848
str. F0332]
Length = 224
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 4 CDSNSIL-RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D N +L A + ++T ++L + + + + L+ ++ W RH+ +S
Sbjct: 5 VDDNGVLAEAPPSGGASHFGQDTWQQLVDYAGMLEREGELRGLLGPRELKRLWTRHLLNS 64
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + P+ + +D+GSG GFPG++ +I + + L++S ++A +L VV+ +
Sbjct: 65 MAILDFIPFEAKVVDVGSGAGFPGVVAAIVRKDLR---LVLVDSMERRARWLNDVVKDLS 121
Query: 123 ARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+V R ++ + D ++ARA+A L LL ++ P L
Sbjct: 122 LPNVEVVHARSEDLVGKV-DADTVTARAVAALRKLLPWTMPLL 163
>gi|229035140|ref|ZP_04189086.1| Methyltransferase GidB [Bacillus cereus AH1271]
gi|228728206|gb|EEL79236.1| Methyltransferase GidB [Bacillus cereus AH1271]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ V +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARA+A L L E P +
Sbjct: 134 KEGVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|308388408|gb|ADO30728.1| glucose inhibited division protein B [Neisseria meningitidis
alpha710]
gi|325131047|gb|EGC53772.1| methyltransferase GidB [Neisseria meningitidis OX99.30304]
gi|325202975|gb|ADY98429.1| methyltransferase GidB [Neisseria meningitidis M01-240149]
gi|325207227|gb|ADZ02679.1| methyltransferase GidB [Neisseria meningitidis NZ-05/33]
Length = 207
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAELADFVSWTVHLL 157
>gi|217968662|ref|YP_002353896.1| 16S rRNA methyltransferase GidB [Thauera sp. MZ1T]
gi|217505989|gb|ACK53000.1| methyltransferase GidB [Thauera sp. MZ1T]
Length = 240
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ +ET+++L F L LKW+K NL + + ++ H+ DSL V + D+GS
Sbjct: 46 LPQETIDRLLAFGELLLKWNKVYNLTAIRSPQELITHHLLDSLAVLPQLEAVNRLADIGS 105
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
GGG PG++ +I + +V+ IE+ KKASF
Sbjct: 106 GGGLPGVVLAIVRPGL---VVSSIETVGKKASF 135
>gi|163754285|ref|ZP_02161408.1| glucose-inhibited division protein B [Kordia algicida OT-1]
gi|161326499|gb|EDP97825.1| glucose-inhibited division protein B [Kordia algicida OT-1]
Length = 209
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ E LE+ L+ +W+ +IN++S +++ ++RHV L + ++ P+ S +D
Sbjct: 10 ELTTEQLEQFGQLEALYKEWNAQINVISRKDIDELYLRHVLHGLAIAKVQPFVAGSRILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+G+GGGFPGI +I ++ LV+ I K K
Sbjct: 70 VGTGGGFPGIPLAILFPEVQFVLVDAIGKKIK 101
>gi|296330030|ref|ZP_06872514.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676754|ref|YP_003868426.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153069|gb|EFG93934.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414998|gb|ADM40117.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+S LE+ E +Y + ++W++KINL S + ++ +++H DS+ + + D+
Sbjct: 17 LSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFNQVNTICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP + I + V +++S NK+ +FL + + F A +
Sbjct: 77 GAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQ 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A L L E P +
Sbjct: 134 RKDVRESYDIVTARAVARLSVLSELCLPLV 163
>gi|295132808|ref|YP_003583484.1| glucose-inhibited division protein B [Zunongwangia profunda SM-A87]
gi|294980823|gb|ADF51288.1| glucose-inhibited division protein B [Zunongwangia profunda SM-A87]
Length = 209
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWI-D 77
+S E + E L+ W+ KIN+VS +++ ++RHV SL + ++ + P I D
Sbjct: 10 GLSPEQITHFERLEDLYKDWNLKINVVSRKDIDELYLRHVLHSLGIAKVQKFNPGAHILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I + +L++S KK + VV+ + K R++
Sbjct: 70 VGTGGGFPGIPMAILFPEVS---FHLVDSIGKKMKVVEEVVEGLGLQNVKTTNDRVE--- 123
Query: 137 QMITTCDVISARALADLDTLLEYS 160
+ D I +RA+A + T + ++
Sbjct: 124 NIDGHYDFIISRAVAAMPTFVRWT 147
>gi|261391726|emb|CAX49175.1| methyltransferase GidB (glucose-inhibited division protein B)
[Neisseria meningitidis 8013]
Length = 207
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ + DV+++RA A+L + ++ L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAELADFVSWTVHLL 157
>gi|194016524|ref|ZP_03055138.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
gi|194011997|gb|EDW21565.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGG 82
LE+ E ++ + ++W++K+NL S + E+ +++H DS+ H +I D+G+G
Sbjct: 22 LEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISASFFIDFHKVTTIC-DIGAGA 80
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-----VQKTA---ARGKVFACRIQE 134
GFP I I + V +++S K+ +FL + +Q T R + F R ++
Sbjct: 81 GFPSIPLKICFPHLH---VTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAETFGQRKEK 137
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D+++ARA+A L L E P + ++
Sbjct: 138 R----ESYDLVTARAVARLSVLSELCLPLVKKE 166
>gi|291561654|emb|CBL40453.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SS3/4]
Length = 248
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----- 74
+S++ E+ +Y + ++ +K +NL + + + D +H DSL + P +
Sbjct: 19 ELSKQQKEQFFKYYEMLIEKNKVMNLTAITELSDVIKKHFVDSLLLVLAAPELGLKLDTS 78
Query: 75 ----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAAR 124
ID+G+G GFPGI I ++ + L++S NK+ FL V++ A
Sbjct: 79 AKYRCIDVGTGAGFPGIPLKIAFPGLK---ITLLDSLNKRVGFLNEVIETLGLTDINAVH 135
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
G+ A P+ D+ +RA+A++ TL EY P++
Sbjct: 136 GR--AEDYGRDPKYREQYDLCVSRAVANMSTLSEYCIPFV 173
>gi|229164433|ref|ZP_04292361.1| Methyltransferase GidB [Bacillus cereus R309803]
gi|228619038|gb|EEK75936.1| Methyltransferase GidB [Bacillus cereus R309803]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ V +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARA+A L L E P +
Sbjct: 134 KEGVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|261856910|ref|YP_003264193.1| methyltransferase GidB [Halothiobacillus neapolitanus c2]
gi|261837379|gb|ACX97146.1| methyltransferase GidB [Halothiobacillus neapolitanus c2]
Length = 217
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+++ + +++ + L KW++ NL + +ED +RHV D+L V +D+G
Sbjct: 24 DIALRSAQRISAYIHLLAKWNRTYNLTAVRNLEDMRVRHVLDALAVRPWIRSAGHLVDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
SG G PGI+ ++ S+ V LI+S K F V++ A V R++E P
Sbjct: 84 SGPGIPGILLALADESLA---VTLIDSNLKMTRFAEAAVRELAIENVTVLRSRVEEVP 138
>gi|118594207|ref|ZP_01551554.1| methyltransferase GidB [Methylophilales bacterium HTCC2181]
gi|118439985|gb|EAV46612.1| methyltransferase GidB [Methylophilales bacterium HTCC2181]
Length = 206
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S + KL + + LKW+K NL + + I H+ DSL V QL + +D+GSG
Sbjct: 20 SNNIVHKLLIYKDILLKWNKSFNLTAMRDEKTIIINHLLDSLSVVQLIKENEV-LDVGSG 78
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
G PGI+ ++ + + LI+ KKA F++ V + + V R+++
Sbjct: 79 AGLPGIVLALHDPKKQ---ITLIDKVGKKAIFMKQVCLELEIKNVDVIHGRVEDMDHT-K 134
Query: 141 TCDVISARALADLDTLLEYS 160
D I ARA +++ L++ +
Sbjct: 135 KFDAIVARAFSEMQMLVDLT 154
>gi|254884549|ref|ZP_05257259.1| glucose-inhibited division protein B [Bacteroides sp. 4_3_47FAA]
gi|319640759|ref|ZP_07995472.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_1_40A]
gi|254837342|gb|EET17651.1| glucose-inhibited division protein B [Bacteroides sp. 4_3_47FAA]
gi|317387571|gb|EFV68437.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_1_40A]
Length = 209
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N+S + + Y L+ W+ KIN++S + + + HV SL +V P I +
Sbjct: 10 NLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINFTPDTQI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I ++ +L++S KK + + F CR +E
Sbjct: 69 DLGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVKVATEIANAIGLKNVTFRHCRAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
+ D + +RA+ L L++
Sbjct: 126 KRKF---DFVVSRAVMPLGDLIK 145
>gi|28209871|ref|NP_780815.1| 16S rRNA methyltransferase GidB [Clostridium tetani E88]
gi|38257542|sp|Q899S0|RSMG_CLOTE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28202306|gb|AAO34752.1| glucose inhibited division protein B [Clostridium tetani E88]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
+ +W+KKINL + + ED +H D +++++ + + +D+G+G GFPGI I
Sbjct: 32 MIQEWNKKINLTAITEDEDIIKKHFIDCIKIYKFDKFKKLNKIMDVGTGAGFPGIPIKIL 91
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
E V L++S NK+ FL V ++ R + +A + + Q D
Sbjct: 92 EEEKE---VILLDSLNKRIKFLDEVSKELKLENIKNLHGRAEDYAQKEEFREQF----DG 144
Query: 145 ISARALADLDTLLEYSFPWL 164
+ +RA+A++ L E+ P++
Sbjct: 145 VVSRAVANISVLSEFCLPYI 164
>gi|254672749|emb|CBA06758.1| glucose inhibited division protein B [Neisseria meningitidis
alpha275]
Length = 207
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DV+++RA A+L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAEL 146
>gi|84625949|ref|YP_453321.1| glucose-inhibited division protein B [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|123520479|sp|Q2NXD0|RSMG_XANOM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84369889|dbj|BAE71047.1| methyltransferase gidB [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 212
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + RH+ DSL + PY + DLG+G G PGI
Sbjct: 34 YLALLVRWNKTYNLTAVRDPRAMVTRHLLDSL---AMQPYIASGMLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KK F+R ++ R A EA T D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKVRFMREALRHLELRNARVAESRAEALDEPTAYDHLTARA 147
Query: 150 LADL 153
L L
Sbjct: 148 LDKL 151
>gi|312794737|ref|YP_004027660.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181877|gb|ADQ42047.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 238
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
+ +L YNV + K + + L L+ +K NL + E+F I+H+ DSL + +
Sbjct: 5 DRVLEYYNVKNTLVVKQLFLKYMNLVLEKNKLFNLTAIEDEEEFVIKHIADSLSLLKFLE 64
Query: 71 YPS-----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S + ID+GSG G PG+ I + SI V L +S KK +F+ + G
Sbjct: 65 EESSIQNPVAIDIGSGFGAPGLFVKIAMPSIN---VWLNDSNKKKCNFMIEAKESLGISG 121
Query: 126 KVFACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWL 164
C E D + ARA+ L+ L EY+ P L
Sbjct: 122 VNIVCERAEVLGRKEDFREKFDFVFARAVDKLNVLCEYALPLL 164
>gi|169830195|ref|YP_001700353.1| methyltransferase gidB [Lysinibacillus sphaericus C3-41]
gi|238688171|sp|B1HPM1|RSMG_LYSSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168994683|gb|ACA42223.1| Methyltransferase gidB [Lysinibacillus sphaericus C3-41]
Length = 238
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI--DL 78
+S + + + + ++ L ++W++K+NL + + +E +++H DS+ + + D+
Sbjct: 17 LSEKQITQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSISASFYFDFSKVITVCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQ 137
G+G GFP I I + V +++S NK+ +FL ++ + F R +E Q
Sbjct: 77 GAGAGFPSIPIKICFPHLH---VTIVDSLNKRITFLNHLSDELQLENMNFVHARAEEFGQ 133
Query: 138 MIT---TCDVISARALADLDTLLEYSFPWLYQ 166
I DV++ARA+A L L E P Q
Sbjct: 134 NIKYREQYDVVTARAVARLSVLSELCVPLAKQ 165
>gi|224539434|ref|ZP_03679973.1| hypothetical protein BACCELL_04339 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518939|gb|EEF88044.1| hypothetical protein BACCELL_04339 [Bacteroides cellulosilyticus
DSM 14838]
Length = 206
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGII 88
Y L+ W+ KIN++S +E+ + HV SL +V + P I +DLG+GGGFPGI
Sbjct: 22 LYDLYTDWNAKINVISRKDIENLYEHHVLHSLGIAKVIRFTPGTRI-MDLGTGGGFPGIP 80
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCDVISA 147
+I ++ +L++S KK V + F R +E Q+ D + +
Sbjct: 81 LAILFPEVK---FHLVDSIGKKVRVATEVANSIGLKNVTFRHARAEEEKQLF---DFVVS 134
Query: 148 RALADLDTLLE 158
RA+ L LL+
Sbjct: 135 RAVMPLADLLK 145
>gi|161870873|ref|YP_001600047.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis 053442]
gi|189045868|sp|A9M3R8|RSMG_NEIM0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161596426|gb|ABX74086.1| glucose inhibited division protein B [Neisseria meningitidis
053442]
Length = 207
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++ ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAAMGLDILETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DVI++RA A+L
Sbjct: 124 SGRVEAVSDV--RADVITSRAFAEL 146
>gi|157694473|ref|YP_001488935.1| 16S rRNA methyltransferase GidB [Bacillus pumilus SAFR-032]
gi|166989743|sp|A8FJF8|RSMG_BACP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157683231|gb|ABV64375.1| glucose-inhibited division protein B [Bacillus pumilus SAFR-032]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGG 82
LE+ E ++ + ++W++K+NL S + E+ +++H DS+ H +I D+G+G
Sbjct: 22 LEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISASFFIDFHKVTTIC-DIGAGA 80
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-----VQKTA---ARGKVFACRIQE 134
GFP I I + V +++S K+ +FL + +Q T R + F R ++
Sbjct: 81 GFPSIPLKICFPHLH---VTIVDSLQKRITFLNELAKGLNLQDTTFYHDRAETFGQRKEK 137
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D+++ARA+A L L E P + ++
Sbjct: 138 R----ESYDLVTARAVARLSVLSELCLPLVKKE 166
>gi|160914902|ref|ZP_02077116.1| hypothetical protein EUBDOL_00910 [Eubacterium dolichum DSM 3991]
gi|158433442|gb|EDP11731.1| hypothetical protein EUBDOL_00910 [Eubacterium dolichum DSM 3991]
Length = 236
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSIWIDLGSGGGFP 85
++ + + + ++W+KK+NL + + +++ + +H DS L F + S + D+G+G GFP
Sbjct: 27 QQFDEYAQMLVEWNKKMNLTAITEIDEIYEKHFLDSLLPSFDMEINGS-FCDVGAGAGFP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQE-APQMITTCD 143
I I ++ V ++E+ K+ +FL + +K + V R ++ A + + D
Sbjct: 86 SIPLKIVYPQLK---VTIVETLGKRITFLNALCEKLGLKDVVLVHARAEDYAKEHRESFD 142
Query: 144 VISARALADLDTLLEYSFPWL 164
++SARA+A+L L E P +
Sbjct: 143 IVSARAVANLPMLSELCIPLV 163
>gi|302825464|ref|XP_002994346.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
gi|300137758|gb|EFJ04589.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
Length = 272
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIW----IDLGSGGGFPGII 88
L W++++NL S + ++ RH+ DSL V + H S +D+GSG G PGII
Sbjct: 52 LLDWNQRMNLTSVTDRKEVMERHIRDSLSLLPVIEKHCSLSDGSLKVVDIGSGAGLPGII 111
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI---TTCDV 144
I S + + LIES KK FL V + + V R +E + + T DV
Sbjct: 112 FGIARPSWK---ITLIESIQKKCDFLEDAVLAVSLQNVSVVRARAEEKGRDVEFRETFDV 168
Query: 145 ISARALADLDTLLEYSFPWL 164
ARA+A++ L E P++
Sbjct: 169 AVARAVAEMRVLAELCLPFV 188
>gi|319411324|emb|CBY91735.1| methyltransferase GidB (glucose-inhibited division protein B)
[Neisseria meningitidis WUE 2594]
gi|325143203|gb|EGC65543.1| methyltransferase GidB [Neisseria meningitidis 961-5945]
Length = 207
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LRA ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 7 LRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMVVHHLLDSLTLLPHI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 67 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 123
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DV+++RA A+L
Sbjct: 124 SGRVEAVSDV--RADVVTSRAFAEL 146
>gi|150005537|ref|YP_001300281.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus ATCC 8482]
gi|294778738|ref|ZP_06744157.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus PC510]
gi|166224575|sp|A6L4P5|RSMG_BACV8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149933961|gb|ABR40659.1| glucose-inhibited division protein [Bacteroides vulgatus ATCC 8482]
gi|294447394|gb|EFG15975.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus PC510]
Length = 209
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N+S + + Y L+ W+ KIN++S + + + HV SL +V P I +
Sbjct: 10 NLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINFTPDTQI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I ++ +L++S KK + + F CR +E
Sbjct: 69 DLGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVKVATEIANAIGLKNVTFRHCRAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
+ D + +RA+ L L++
Sbjct: 126 KRKF---DFVVSRAVMPLGDLIK 145
>gi|52145290|ref|YP_086747.1| glucose-inhibited division protein B [Bacillus cereus E33L]
gi|81685204|sp|Q630C0|RSMG_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51978759|gb|AAU20309.1| glucose-inhibited division protein B [Bacillus cereus E33L]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 21/157 (13%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D
Sbjct: 16 TLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFA 129
+G+G GFP I I ++ V +++S K+ +FL ++ QK R + F
Sbjct: 76 VGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFG 132
Query: 130 CR--IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ ++EA D++ ARA+A L L E P +
Sbjct: 133 KKEGVREA------YDIVMARAVARLSVLSELCLPLV 163
>gi|24380281|ref|NP_722236.1| 16S rRNA methyltransferase GidB [Streptococcus mutans UA159]
gi|20177893|sp|Q93D95|RSMG_STRMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|15625438|gb|AAL04086.1|AF397166_11 GidB [Streptococcus mutans]
gi|24378293|gb|AAN59542.1|AE015017_8 putative glucose-inhibited division protein [Streptococcus mutans
UA159]
Length = 237
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 18/156 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---IWI 76
N+S + E+ + ++ L ++W+ KINL + + ++ +++H DS+ P+ +
Sbjct: 16 NLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIAPLLSGYIPNESLKLL 75
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVF 128
D+G+G GFP + I ++ V +I+S NK+ FL + V R +VF
Sbjct: 76 DIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEVF 132
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A L L E + P+L
Sbjct: 133 G----QDKNFRAHFDLVTARAVARLQVLSELTIPFL 164
>gi|30265500|ref|NP_847877.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42784678|ref|NP_981925.1| 16S rRNA methyltransferase GidB [Bacillus cereus ATCC 10987]
gi|47531068|ref|YP_022417.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. 'Ames
Ancestor']
gi|47568681|ref|ZP_00239378.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49188319|ref|YP_031572.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Sterne]
gi|49480474|ref|YP_039472.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65317463|ref|ZP_00390422.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Bacillus anthracis
str. A2012]
gi|118480509|ref|YP_897660.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis str. Al
Hakam]
gi|165873015|ref|ZP_02217636.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167635020|ref|ZP_02393337.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|167641727|ref|ZP_02399970.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|170689463|ref|ZP_02880653.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|170707495|ref|ZP_02897948.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|177655291|ref|ZP_02936845.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190569287|ref|ZP_03022181.1| 16S rRNA methyltransferase GidB [Bacillus anthracis Tsiankovskii-I]
gi|196036141|ref|ZP_03103541.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196045489|ref|ZP_03112720.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206975810|ref|ZP_03236721.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218906674|ref|YP_002454508.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|222098959|ref|YP_002533017.1| 16S rRNA methyltransferase gidb [Bacillus cereus Q1]
gi|225867463|ref|YP_002752841.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227818251|ref|YP_002818260.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228918094|ref|ZP_04081622.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228930488|ref|ZP_04093488.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936762|ref|ZP_04099553.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949204|ref|ZP_04111472.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229094593|ref|ZP_04225660.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|229124985|ref|ZP_04254159.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|229142231|ref|ZP_04270755.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|229187711|ref|ZP_04314847.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|229199694|ref|ZP_04326337.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|229600306|ref|YP_002869691.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|254687077|ref|ZP_05150935.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
CNEVA-9066]
gi|254724140|ref|ZP_05185925.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A1055]
gi|254735157|ref|ZP_05192867.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Western
North America USA6153]
gi|254742134|ref|ZP_05199821.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Kruger B]
gi|254755956|ref|ZP_05207988.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Vollum]
gi|254761364|ref|ZP_05213386.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Australia
94]
gi|300118816|ref|ZP_07056536.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|301056956|ref|YP_003795167.1| glucose-inhibited division protein B [Bacillus anthracis CI]
gi|38257413|sp|Q81JH4|RSMG_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976409|sp|Q6HAF4|RSMG_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976456|sp|Q72WU5|RSMG_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224574|sp|A0RLR0|RSMG_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725349|sp|B7JIK9|RSMG_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766877|sp|C3P3F3|RSMG_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766878|sp|C3LGT9|RSMG_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766879|sp|C1ER75|RSMG_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766880|sp|B9IT40|RSMG_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|30260178|gb|AAP29363.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42740610|gb|AAS44533.1| glucose-inhibited division protein B [Bacillus cereus ATCC 10987]
gi|47506216|gb|AAT34892.1| glucose-inhibited division protein B [Bacillus anthracis str. 'Ames
Ancestor']
gi|47554669|gb|EAL13023.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49182246|gb|AAT57622.1| glucose-inhibited division protein B [Bacillus anthracis str.
Sterne]
gi|49332030|gb|AAT62676.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|118419734|gb|ABK88153.1| 16S rRNA m(7)G-527 methyltransferase [Bacillus thuringiensis str.
Al Hakam]
gi|164711227|gb|EDR16783.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167510281|gb|EDR85684.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|167529494|gb|EDR92244.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|170127491|gb|EDS96365.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|170666565|gb|EDT17338.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|172080218|gb|EDT65310.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190559594|gb|EDV13585.1| 16S rRNA methyltransferase GidB [Bacillus anthracis Tsiankovskii-I]
gi|195991308|gb|EDX55276.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196023696|gb|EDX62372.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206745904|gb|EDZ57300.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218540166|gb|ACK92564.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|221243018|gb|ACM15728.1| glucose-inhibited division protein B [Bacillus cereus Q1]
gi|225789230|gb|ACO29447.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227006072|gb|ACP15815.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228583789|gb|EEK41964.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|228595779|gb|EEK53463.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|228641249|gb|EEK97556.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|228658486|gb|EEL14152.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|228688840|gb|EEL42671.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|228810487|gb|EEM56840.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228822971|gb|EEM68812.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829207|gb|EEM74844.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841574|gb|EEM86690.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229264714|gb|ACQ46351.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|298723784|gb|EFI64506.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|300379125|gb|ADK08029.1| glucose-inhibited division protein B [Bacillus cereus biovar
anthracis str. CI]
gi|324329433|gb|ADY24693.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 239
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 21/156 (13%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFAC 130
G+G GFP I I ++ V +++S K+ +FL ++ QK R + F
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 131 R--IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ ++EA D++ ARA+A L L E P +
Sbjct: 134 KEGVREA------YDIVMARAVARLSVLSELCLPLV 163
>gi|320527144|ref|ZP_08028331.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
gi|320132472|gb|EFW25015.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
Length = 232
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S +++LE + L ++W++K+NL + + + +H DS+ D+G
Sbjct: 16 SLSETQVKQLEQYAQLLVEWNEKMNLTAITEHGEILEKHFYDSILPLGKGKIFGKIADVG 75
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G GFPG++ I ++ V+LIE K+ +FL+ V+ + V+ R +E Q+
Sbjct: 76 TGAGFPGLVWKIVKPELD---VSLIEPTGKRCTFLQEVMNQLHLENIHVYNTRAEE--QV 130
Query: 139 IT---TCDVISARALADLDTLLEYSFPWL 164
T DV++ARA+A+L L E P +
Sbjct: 131 KTDREQYDVVTARAVANLRVLSELCIPLV 159
>gi|325275322|ref|ZP_08141275.1| 16S rRNA methyltransferase GidB [Pseudomonas sp. TJI-51]
gi|324099570|gb|EGB97463.1| 16S rRNA methyltransferase GidB [Pseudomonas sp. TJI-51]
Length = 216
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
+S E EKL + L +KW+K NL + ++ RH+ DSL V +H W+D+G
Sbjct: 24 LSAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMAFIHSARDNWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGG PGI +I V ++++ KK FL V + V R+ EA Q
Sbjct: 84 SGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTVIHSRV-EAFQP 139
Query: 139 ITTCDVISARALADLDTLLEYS 160
D I +RA + ++ ++
Sbjct: 140 AQPFDGIISRAFSSMENFTNWT 161
>gi|321313661|ref|YP_004205948.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
gi|320019935|gb|ADV94921.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
Length = 239
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ + + D
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFNQVNTICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I + V +++S NK+ +FL + + F A
Sbjct: 76 VGAGAGFPSLPIKICFPHLN---VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D+++ARA+A L L E P +
Sbjct: 133 QRKDVRESYDIVTARAVARLSVLSELCLPLV 163
>gi|296395441|ref|YP_003660325.1| methyltransferase GidB [Segniliparus rotundus DSM 44985]
gi|296182588|gb|ADG99494.1| methyltransferase GidB [Segniliparus rotundus DSM 44985]
Length = 228
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ E W RH+ +S V +L P + DLGSG G PGI +I S + + L
Sbjct: 36 GLIGPREAERLWERHILNSAAVAELIPAGAHAADLGSGAGLPGIPIAIARSDVR---LTL 92
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQ--EAPQMITTCDVISARALADLDTLLEYSF 161
+E ++ ++ ++ T+ V R + EA + + V+ +RA+A LDTL +S
Sbjct: 93 VEPLARRVDPVQQFLRGTSLDVGVLRARAESAEAREHLAPIPVVLSRAVAALDTLARWSS 152
Query: 162 PWL 164
P L
Sbjct: 153 PLL 155
>gi|226491241|ref|NP_001144818.1| hypothetical protein LOC100277897 [Zea mays]
gi|195647450|gb|ACG43193.1| hypothetical protein [Zea mays]
Length = 285
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----------------IDLG 79
L+W++++NL + + + RHV DSL + L P ++ ID+G
Sbjct: 68 LLEWNQRMNLTAXTDEAEVMARHVADSLAM--LPPLERVYRGRSTSAGGAIDGVRLIDVG 125
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC----RIQEA 135
SG G PG+I ++ S + L+ES + +FL + V+ C ++ ++
Sbjct: 126 SGAGLPGLILAVARPSWK---FTLLESMRXRCTFLEHAVEXMNLSNVDVVCDRAEKVGQS 182
Query: 136 PQMITTCDVISARALADLDTLLEYSFP 162
+ D+++ARA+ +L L EY P
Sbjct: 183 XDFRESYDIVAARAVXELKVLAEYCIP 209
>gi|289551829|ref|YP_003472733.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
gi|289181360|gb|ADC88605.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
Length = 240
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
+ + +Y L ++W++K+NL S + D +++H DS+ H + P D+G+G GFP
Sbjct: 25 QFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDSITPSFYHDFNQPLTVCDVGAGAGFP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFACRIQEAPQ 137
I I +++ V +++S NK+ FL ++ + R + F +
Sbjct: 85 SIPLKIVYPALK---VTIVDSLNKRIQFLNHLASELELQDVSFIHDRAETFGKGVYRE-- 139
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A L L E P +
Sbjct: 140 ---SYDIVTARAVARLTVLSELCLPLV 163
>gi|261380617|ref|ZP_05985190.1| 16S rRNA methyltransferase GidB [Neisseria subflava NJ9703]
gi|284796595|gb|EFC51942.1| 16S rRNA methyltransferase GidB [Neisseria subflava NJ9703]
Length = 209
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL + L KW+K NL + H+ DSL + + +D+GSGGG PGI
Sbjct: 25 KLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYIEHAQTMLDVGSGGGQPGI 84
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
T+I ++ + L+++ KK +FL+ V + + +V + R++ A DVI+
Sbjct: 85 PTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVISGRVEAAAD--CRADVIT 139
Query: 147 ARALADL 153
+RA A+L
Sbjct: 140 SRAFAEL 146
>gi|307128691|ref|YP_003880721.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
CARI]
gi|306483153|gb|ADM90023.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
CARI]
Length = 208
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSI 96
++ KIN++S ++++ F+ H SL ++++ + SI +D+G+GGGFPGI +I +
Sbjct: 33 FNLKINIISKNSLKLFYESHFLHSLSIYKIFYFFNKSIILDVGTGGGFPGIPLAIMFNKT 92
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQMITTCDVISARALADLDT 155
+ LI+S KK + +++ K + C RI+ + C+ + RA+
Sbjct: 93 K---FILIDSIKKKIKLINFIINKLHLKNVYIQCTRIENFNK---KCNFLLGRAVTKFTN 146
Query: 156 LLE 158
L+
Sbjct: 147 FLK 149
>gi|258544325|ref|ZP_05704559.1| glucose-inhibited division protein B [Cardiobacterium hominis ATCC
15826]
gi|258520405|gb|EEV89264.1| glucose-inhibited division protein B [Cardiobacterium hominis ATCC
15826]
Length = 209
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 16 LNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ + + ++ ++ +L L KW++ NL + VE+ RHV D L V +
Sbjct: 14 LDALPFAVDAAQRAQFARYLDLLNKWNQVHNLTAVRDVEEQVSRHVLDCLAVLPYIEDAA 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRI 132
D+GSG G P ++ +I S + V +ES KKA+F+R V+ A A +V A R+
Sbjct: 74 TLADIGSGAGLPALMLAIMRSQLA---VTALESNGKKAAFIREAVRVLALANVQVVAQRV 130
Query: 133 ---QEAPQMITTCDVISARALADLD 154
Q PQ VI +RALA D
Sbjct: 131 EDWQAPPQA-----VIISRALAAAD 150
>gi|217962974|ref|YP_002341552.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
gi|226725352|sp|B7HZG8|RSMG_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217066626|gb|ACJ80876.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
Length = 239
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 21/156 (13%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFAC 130
G+G GFP I I ++ V +++S K+ +FL ++ QK R + F
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 131 R--IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ ++EA D++ ARA+A L L E P +
Sbjct: 134 KEGVREA------YDIVMARAVARLSVLSELCLPLV 163
>gi|134096564|ref|YP_001101639.1| 16S rRNA methyltransferase GidB [Herminiimonas arsenicoxydans]
gi|189045854|sp|A4GAI1|RSMG_HERAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|133740467|emb|CAL63518.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Herminiimonas arsenicoxydans]
Length = 218
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +S + KL + L +KW+ NL + +H+ DSL +D
Sbjct: 21 SLTLSEAQITKLIDYLALMVKWNSVYNLTAVRDPLQMVTQHLLDSLAAVSAFAGAKNVLD 80
Query: 78 LGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE- 134
+G+GGG PGI+ +I + E + V+LI++ +KK +FL V + A V R+++
Sbjct: 81 VGAGGGLPGIVLAIWAAEAEPEMRVSLIDTVHKKTAFLTQVKAELGLANVSVHTARVEQW 140
Query: 135 -APQMITTCDVISARALADLDTLLEYS 160
AP DVI++RA A+L+ + +S
Sbjct: 141 NAPHKF---DVITSRAFAELNDFVNWS 164
>gi|306834794|ref|ZP_07467858.1| 16S rRNA methyltransferase GidB [Corynebacterium accolens ATCC
49726]
gi|304569322|gb|EFM44823.1| 16S rRNA methyltransferase GidB [Corynebacterium accolens ATCC
49726]
Length = 202
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
EY L S + + V W RH+ + + Q+ P + ID+GSG G PGI
Sbjct: 19 EYHDSLATDGSTR-GFIGPREVPRLWERHILNCAVIEQVIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCD 143
+I + + LIE K+ ++L V +K T RG+ I++A + D
Sbjct: 78 AIARPDLH---ITLIEPLLKRYNYLNEVTEKLGLENVTVRRGRAEEGPIKKA---VAGAD 131
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
V+++RA+A L L ++S P + +
Sbjct: 132 VVTSRAVAPLGKLAKWSLPLVRK 154
>gi|315660000|ref|ZP_07912858.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
gi|315494901|gb|EFU83238.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
Length = 240
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
+ + +Y L ++W++K+NL S + D +++H DS+ H + P D+G+G GFP
Sbjct: 25 QFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDSITPSFYHDFNQPLTVCDVGAGAGFP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFACRIQEAPQ 137
I I +++ V +++S NK+ FL ++ + R + F +
Sbjct: 85 SIPLKIVYPALK---VTIVDSLNKRIQFLNHLASELELQDVSFIHDRAETFGKGVYRE-- 139
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A L L E P +
Sbjct: 140 ---SYDIVTARAVARLTVLSELCLPLV 163
>gi|315185861|gb|EFU19626.1| methyltransferase GidB [Spirochaeta thermophila DSM 6578]
Length = 214
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 20/152 (13%)
Query: 5 DSNSIL-RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D S+L R LL + L Y + L +W +I+LV+ + E + H+ DSL
Sbjct: 3 DPASLLDRGLALLGLSPTPSQRAALLSYLHLLA-EWGSRIDLVADPSPEALVV-HLLDSL 60
Query: 64 RVFQLHPYP-------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
P P S DLGSG G PGI +I +E V L+E++ K+A FL +
Sbjct: 61 A-----PLPHLRAFLSSPLADLGSGAGLPGIPLAIMNPHLE---VLLVEAREKRAVFLEH 112
Query: 117 VVQKT-AARGKVFACRIQEAPQMITTCDVISA 147
V+ AR V R+++ P + C V A
Sbjct: 113 VLLSVDLARCTVLHARLEDLPLHV-PCAVARA 143
>gi|222530699|ref|YP_002574581.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
gi|254766875|sp|B9MQF1|RSMG_ANATD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222457546|gb|ACM61808.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
Length = 238
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGGFPGIIT 89
L L+ +K NL + E+F I+H+ DSL + + + + ID+GSG G PG+
Sbjct: 29 LVLEKNKLFNLTAIENEEEFVIKHIADSLSLLKFIEQENSNQNPVAIDIGSGFGAPGLFV 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCDVI 145
I + S+ V L +S KK F+ + G C E + D +
Sbjct: 89 KIAMPSVN---VFLNDSNKKKCKFMNEAKESLGISGVNVVCERAEVLGRKEEFREKFDFV 145
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+ L+ L EY+ P L
Sbjct: 146 FARAVDRLNVLCEYAIPLL 164
>gi|33863763|ref|NP_895323.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9313]
gi|55976487|sp|Q7V5Q2|RSMG_PROMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33635346|emb|CAE21671.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9313]
Length = 247
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSI 74
++ S E LE++ L +W+ ++NL D+WI V DSL Q P
Sbjct: 20 WHPSSEQLEQMIALQALLRQWNARVNLTRLVEGGDYWIMQVFDSLWPLQSELQNAQQPRR 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+GSGGGFPG++ +I ++ G + L++S +K + L+ + K +V R +
Sbjct: 80 CIDIGSGGGFPGLVLAI---ALPGARITLVDSVGRKTAALKAMAAKLGLTSRV-TVRSER 135
Query: 135 A------PQMITTCDVISARALADLDTLLEYSFPWL 164
A P D+ ARA++ + EY P L
Sbjct: 136 AEFTGQDPCCRGLFDLAMARAVSTAPVVAEYLVPLL 171
>gi|253702730|ref|YP_003023919.1| methyltransferase GidB [Geobacter sp. M21]
gi|259495496|sp|C6DYR8|RSMG_GEOSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|251777580|gb|ACT20161.1| methyltransferase GidB [Geobacter sp. M21]
Length = 217
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE L F KW++KINL + + E+ ++H+ DSL + + P +D+GSGGGFP
Sbjct: 25 LESLNLFAEELKKWNRKINLTAITGDEEIALKHLVDSLSLLKAVRGPGRLLDIGSGGGFP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCD 143
I I +E +V+ +++ KK SF + V+ G R + A + + D
Sbjct: 85 CIPVKIVQPDLE--MVS-VDAVVKKISFQKQAVRLLNLTGFTALHVRAETLAQEYAASFD 141
Query: 144 VISARALADLDTLLEYSFPWL 164
+ +RA +D+ + + + P L
Sbjct: 142 WVVSRAFSDIPSFVAMALPVL 162
>gi|241759058|ref|ZP_04757169.1| 16S rRNA methyltransferase GidB [Neisseria flavescens SK114]
gi|241320660|gb|EER56913.1| 16S rRNA methyltransferase GidB [Neisseria flavescens SK114]
Length = 209
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL + L KW+K NL + H+ DSL + + +D+GSGGG PGI
Sbjct: 25 KLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYIKHAQTMLDVGSGGGQPGI 84
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
T+I ++ + L+++ KK +FL+ V + + +V + R++ A DVI+
Sbjct: 85 PTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVISGRVEAAAD--CRADVIT 139
Query: 147 ARALADL 153
+RA A+L
Sbjct: 140 SRAFAEL 146
>gi|212640675|ref|YP_002317195.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus WK1]
gi|212562155|gb|ACJ35210.1| Methyltransferase GidB [Anoxybacillus flavithermus WK1]
Length = 238
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S + L + E +Y L ++W++++NL + + E +++H DS+ + + P D
Sbjct: 17 SLSPQQLTQFETYYQLLVEWNERMNLTAITDKEGVYLKHFFDSITPAFYYDFSQPLSICD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-- 135
+G+G GFP I I + V++++S K+ +FL ++ + G F E
Sbjct: 77 VGAGAGFPSIPLKICFPHLH---VSIVDSLQKRITFLNHLAAQLGLEGVAFYHDRAETFG 133
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWL 164
+ + DV+ ARA+A L L E P +
Sbjct: 134 QKSVRESFDVVMARAVARLSVLSELCLPLV 163
>gi|120407002|ref|YP_956831.1| 16S rRNA methyltransferase GidB [Mycobacterium vanbaalenii PYR-1]
gi|189045867|sp|A1TI25|RSMG_MYCVP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119959820|gb|ABM16825.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium vanbaalenii
PYR-1]
Length = 227
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
LEK + + + L+ VE W RH+ + V +L D+GSG G
Sbjct: 20 ALEKAHLYARILAGAGVERGLLGPREVERLWDRHILNCAVVGELLQPGERVADIGSGAGL 79
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTC 142
PGI ++ + V LIE +++ FLR +++ V R ++ + + T
Sbjct: 80 PGIPLALARPDVH---VILIEPLLRRSEFLRETIEEIGIDCDVVRGRAEDRSVREEVGTT 136
Query: 143 DVISARALADLDTLLEYSFPWL 164
DV+ +RA+A LD L ++S P L
Sbjct: 137 DVVVSRAVASLDKLTKWSSPLL 158
>gi|255080220|ref|XP_002503690.1| predicted protein [Micromonas sp. RCC299]
gi|226518957|gb|ACO64948.1| predicted protein [Micromonas sp. RCC299]
Length = 320
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---- 68
+ +L++Y + ++++ F L+ +K +NL + TV++ RHV DSL +
Sbjct: 78 DAILDSY-LDDAQMDQVRTFATTLLEKNKVMNLTGALTVDEVLGRHVADSLALIPAIERA 136
Query: 69 --------HPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+P I + D+GSG GFPG+ +I + E V L+++ K+ SFL
Sbjct: 137 LDAGASSRNPGAKIRVMDVGSGAGFPGMALAIARPTWE---VTLLDTLQKRTSFLADAAA 193
Query: 120 KTAARG-KVFACRIQEAPQMIT----TCDVISARALADLDTLLEYSFPWL 164
+ A + R ++A ++ DV++ARA+A+L L E P +
Sbjct: 194 ECGADNVRTLWSRAEDAGKVGNEHREAYDVVTARAVAELRVLAELCVPLV 243
>gi|37520277|ref|NP_923654.1| 16S rRNA methyltransferase GidB [Gloeobacter violaceus PCC 7421]
gi|55976480|sp|Q7NMQ7|RSMG_GLOVI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|35211270|dbj|BAC88649.1| glucose inhibited division protein B [Gloeobacter violaceus PCC
7421]
Length = 251
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIWIDLGSGGGFPG 86
E Y L L + ++NL + E+FW +H+ DSLR FQ PS+ ID+G+G GFPG
Sbjct: 23 ERLYALVLAGNTRLNLTRITGREEFWEKHLFDSLRGLAAFQDQKEPSL-IDIGTGAGFPG 81
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAPQM 138
+ +I V L++S KK +F+ +Q R + A R +
Sbjct: 82 LPIAIAHPDW---YVVLVDSVRKKIAFVLSTIQALGLTNAQALTGRAEDLAHRREHR--- 135
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ D+ RA+A + EY+ P++
Sbjct: 136 -ESYDLAVLRAVAQANVCAEYALPFV 160
>gi|56422027|ref|YP_149345.1| 16S rRNA methyltransferase GidB [Geobacillus kaustophilus HTA426]
gi|81557669|sp|Q5KU59|RSMG_GEOKA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56381869|dbj|BAD77777.1| glucose-inhibited division protein [Geobacillus kaustophilus
HTA426]
Length = 238
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S L + E +Y L ++W++K+NL + + +++H DS+ + + P D+
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVSPAFYYDFSAPLALCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFAC 130
GSG GFP + I + V++++S K+ FL +++ + R + FA
Sbjct: 77 GSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLITELGLADVALYHERAETFA- 132
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
M + DV++ARA+A + L+E P +
Sbjct: 133 ---RQKGMRESFDVVTARAVARMPVLVELCLPLV 163
>gi|262370371|ref|ZP_06063697.1| methyltransferase GidB [Acinetobacter johnsonii SH046]
gi|262314713|gb|EEY95754.1| methyltransferase GidB [Acinetobacter johnsonii SH046]
Length = 210
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D+G
Sbjct: 18 DLSEEALNLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPKGRL-LDIG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+GGG PG+I I L E V L++S KK FL+ + + R++ +
Sbjct: 77 TGGGMPGMI--IALCQPERQCV-LLDSNGKKIRFLKQFIADLKLTNVIAVQTRVENEDSI 133
Query: 139 --ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI++RA A L + S P+++Q
Sbjct: 134 HDLGQFDVITSRAFASLTDFINASKPYMHQ 163
>gi|297531685|ref|YP_003672960.1| methyltransferase GidB [Geobacillus sp. C56-T3]
gi|297254937|gb|ADI28383.1| methyltransferase GidB [Geobacillus sp. C56-T3]
Length = 238
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S L + E +Y L ++W++K+NL + + +++H DS+ + + P D+
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVSPAFYYDFSAPLALCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFAC 130
GSG GFP + I + V++++S K+ FL +++ + R + FA
Sbjct: 77 GSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLITELGLADVALYHERAETFA- 132
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
M + DV++ARA+A + L+E P +
Sbjct: 133 ---RQKGMRESFDVVTARAVARMPVLVELCLPLV 163
>gi|298490143|ref|YP_003720320.1| methyltransferase GidB ['Nostoc azollae' 0708]
gi|298232061|gb|ADI63197.1| methyltransferase GidB ['Nostoc azollae' 0708]
Length = 251
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPY---PSIWIDLGSGGGFP 85
Y L L+ ++++NL + E+FW +H+ DSL+ Q P+ + ID+G+G GFP
Sbjct: 38 YKLILEGNRQLNLTRITEPEEFWEKHLWDSLKGIAPKQQFIPFLNQNASVIDIGTGAGFP 97
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQ---MITT 141
G+ SI S + V L++S KK +F+ V+ + K R++E Q
Sbjct: 98 GVPISIIFLSCQ---VTLLDSTRKKINFIDTVLSNLSLTNAKTLVGRVEEIGQENKHREN 154
Query: 142 CDVISARALADLDTLLEYSFP 162
D+ RA+ EYS P
Sbjct: 155 YDLAVIRAVGSASACAEYSLP 175
>gi|297792303|ref|XP_002864036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309871|gb|EFH40295.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRV-------FQLHP---YPSI-WIDLGSGGGFPGIITSI 91
+NL ++ ++ RH+EDSL + + LH + I +D+GSG G PG++ +I
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPLKACYNLHSNDLFDHINLVDVGSGAGLPGLVLAI 60
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVFACRIQEAPQMITTCDVI 145
V L+ES NK+ FL +VV T RG+ +C DV
Sbjct: 61 ACPDWR---VTLLESINKRCIFLEHVVNVTGLTNVKIVRGRAESC--GHDVMYREKFDVA 115
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+A++ L+EY P +
Sbjct: 116 IARAVAEMRVLVEYCLPLV 134
>gi|71909713|ref|YP_287300.1| glucose-inhibited division protein B [Dechloromonas aromatica RCB]
gi|123626244|sp|Q478A1|RSMG_DECAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71849334|gb|AAZ48830.1| 16S rRNA m(7)G-527 methyltransferase [Dechloromonas aromatica RCB]
Length = 205
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++ E +KL F L LKW+K NL + H+ DSL + H +D+G
Sbjct: 16 DLPDEAQQKLLAFRDLLLKWNKTYNLTALRDPAQAISHHLLDSLAILP-HVGSGNLLDVG 74
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGG PGI +I + V+++++ KK +FL+ V + A R V R++E M
Sbjct: 75 SGGGLPGIPLAIARPELS---VSMVDTVQKKTTFLQQAVIELALRNVTVHHARVEE---M 128
Query: 139 ITTCDVISARALADL 153
IS+RA A++
Sbjct: 129 QGQYAQISSRAFAEI 143
>gi|256833761|ref|YP_003162488.1| methyltransferase GidB [Jonesia denitrificans DSM 20603]
gi|256687292|gb|ACV10185.1| methyltransferase GidB [Jonesia denitrificans DSM 20603]
Length = 210
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
+ E++E F +K L+ ++ W RH+ +S V P S DLGSG G
Sbjct: 17 SFERIEKFATNLAHEGEKRGLIGPRELDRLWDRHILNSAAVVPFIPEGSSVADLGSGAGL 76
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCD 143
PG++ + V L+E ++ +L +V+ +V R +E T D
Sbjct: 77 PGLVIACMRPEAH---VRLVEPMERRCVWLEEMVETLDLDNVEVLRGRAEEF-HGAFTVD 132
Query: 144 VISARALADLDTLLEYSFPWL 164
V++ARA+A LD L ++ P L
Sbjct: 133 VVTARAVAALDKLSRWALPLL 153
>gi|262375378|ref|ZP_06068611.1| 16S rRNA methyltransferase GidB [Acinetobacter lwoffii SH145]
gi|262309632|gb|EEY90762.1| 16S rRNA methyltransferase GidB [Acinetobacter lwoffii SH145]
Length = 210
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S E L L + + W+K NL + ++ ++H+ DSL + + P + +D+G+
Sbjct: 19 LSDEALNLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPVGRL-LDIGT 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM- 138
GGG PG+I I L E V L++S KK FL+ + + + R++ +
Sbjct: 78 GGGMPGMI--IALCQPERECV-LLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENEDSIN 134
Query: 139 -ITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DVI++RA A L ++ S P+++++
Sbjct: 135 ELGQFDVITSRAFASLTDFVDASKPYMHEQ 164
>gi|311741704|ref|ZP_07715526.1| 16S rRNA methyltransferase GidB [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303225|gb|EFQ79306.1| 16S rRNA methyltransferase GidB [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 202
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ V W RH+ + V Q P + ID+GSG G PGI +I ++ + L
Sbjct: 32 GFIGPREVPRLWDRHIINCAVVKQAIPEGATVIDVGSGAGLPGIPLAIARPDLQ---ITL 88
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYS 160
IE K+ ++L VV++ V R +E P + + DV+++RA+A L L ++S
Sbjct: 89 IEPLLKRYNYLNEVVEELGLDNVTVLRGRAEEGPIKKAVAGADVVTSRAVAPLGKLAKWS 148
Query: 161 FPWLYQ 166
P + +
Sbjct: 149 LPLVRK 154
>gi|256840502|ref|ZP_05546010.1| 16S rRNA methyltransferase GidB [Parabacteroides sp. D13]
gi|256737774|gb|EEU51100.1| 16S rRNA methyltransferase GidB [Parabacteroides sp. D13]
Length = 230
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGG 83
E+ Y L+ W+ KIN++S +E+ + HV SL + + P S+ +DLG+GGG
Sbjct: 41 EQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSV-MDLGTGGG 99
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTC 142
FPGI +I +L++S KK + V + F CR +E Q+
Sbjct: 100 FPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAIGLENVSFRHCRGEEEKQLF--- 153
Query: 143 DVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 154 DFVVSRAVMPLADLVK 169
>gi|167036427|ref|YP_001671658.1| 16S rRNA methyltransferase GidB [Pseudomonas putida GB-1]
gi|189040710|sp|B0KRB8|RSMG_PSEPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166862915|gb|ABZ01323.1| methyltransferase GidB [Pseudomonas putida GB-1]
Length = 216
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
+S E EKL + L +KW+K NL + ++ RH+ DSL V +H W+D+G
Sbjct: 24 LSAEHHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIHNERDNWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGG PGI +I V ++++ KK FL V + V R+ EA Q
Sbjct: 84 SGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTVIHSRV-EAFQP 139
Query: 139 ITTCDVISARALADLDTLLEYS 160
D I +RA + ++ ++
Sbjct: 140 AQPFDGIISRAFSSMENFTNWT 161
>gi|255324012|ref|ZP_05365137.1| 16S rRNA methyltransferase GidB [Corynebacterium tuberculostearicum
SK141]
gi|255298869|gb|EET78161.1| 16S rRNA methyltransferase GidB [Corynebacterium tuberculostearicum
SK141]
Length = 202
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ V W RH+ + V Q P + ID+GSG G PGI +I ++ + L
Sbjct: 32 GFIGPREVPRLWERHIINCAVVKQAIPEGATVIDVGSGAGLPGIPLAIARPDLQ---ITL 88
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYS 160
IE K+ ++L VV++ V R +E P + + DV+++RA+A L L ++S
Sbjct: 89 IEPLLKRYNYLNEVVEELGLDNVTVLRGRAEEGPIKKAVAGADVVTSRAVAPLGKLAKWS 148
Query: 161 FPWLYQ 166
P + +
Sbjct: 149 LPLVRK 154
>gi|124022160|ref|YP_001016467.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9303]
gi|189040708|sp|A2C6U2|RSMG_PROM3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123962446|gb|ABM77202.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9303]
Length = 247
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSI 74
++ S E LE++ L +W+ ++NL D+WI V DSL Q P
Sbjct: 20 WHPSSEQLEQMIALQALLRQWNARVNLTRLVEGGDYWILQVFDSLWPLQSELQNAQQPRR 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL-----------RYVVQKTAA 123
ID+GSGGGFPG++ +I ++ G + L++S +K + L R V+ A
Sbjct: 80 CIDIGSGGGFPGLVLAI---ALPGASITLVDSVGRKTAALKAMAAKLGLTSRVTVRSERA 136
Query: 124 R--GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
G+ CR D+ ARA++ + EY P L
Sbjct: 137 ELTGQDHCCR--------GLFDLAMARAVSTAPVVAEYLVPLL 171
>gi|150007125|ref|YP_001301868.1| 16S rRNA methyltransferase GidB [Parabacteroides distasonis ATCC
8503]
gi|189045872|sp|A6L982|RSMG_PARD8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149935549|gb|ABR42246.1| glucose-inhibited division protein [Parabacteroides distasonis ATCC
8503]
Length = 230
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGG 83
E+ Y L+ W+ KIN++S +E+ + HV SL + + P S+ +DLG+GGG
Sbjct: 41 EQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSV-MDLGTGGG 99
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTC 142
FPGI +I +L++S KK + V + F CR +E Q+
Sbjct: 100 FPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAIGLENVSFRHCRGEEEKQLF--- 153
Query: 143 DVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 154 DFVVSRAVMPLADLVK 169
>gi|227509064|ref|ZP_03939113.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191451|gb|EEI71518.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 245
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHP 70
L V+ + L + + ++ L + ++ +NL + + + +++H DS+ V Q+
Sbjct: 11 LAQNIQVTDDQLGQFDAYFKLLVATNEHVNLTTITEKSEVYLKHFYDSITPAFFVSQIRE 70
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
P D+G+G GFP I I ++ + +++S NK+ FL +VQ+
Sbjct: 71 QPVSICDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRIHFLTELVQQLHLKDVTLVH 127
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
AR + F + + Q + D+++ARA+A L L E P +
Sbjct: 128 ARAEEFGNKKSASRQ---SFDIVTARAVARLSVLSELCLPLV 166
>gi|255015260|ref|ZP_05287386.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_7]
Length = 220
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGG 83
E+ Y L+ W+ KIN++S +E+ + HV SL + + P S+ +DLG+GGG
Sbjct: 31 EQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSV-MDLGTGGG 89
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTC 142
FPGI +I +L++S KK + V + F CR +E Q+
Sbjct: 90 FPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAIGLENVSFRHCRGEEEKQLF--- 143
Query: 143 DVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 144 DFVVSRAVMPLADLVK 159
>gi|189501888|ref|YP_001957605.1| 16S rRNA methyltransferase GidB [Candidatus Amoebophilus asiaticus
5a2]
gi|189497329|gb|ACE05876.1| hypothetical protein Aasi_0466 [Candidatus Amoebophilus asiaticus
5a2]
Length = 216
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+C S I+ ++ N++ + ++ ++ +W+ +NL+S + + ++RHV +
Sbjct: 7 FCPSVEIIFEHF----DNLTSQQKDQFRQLGTIYQEWNACLNLISRKDLPNLYLRHVLHA 62
Query: 63 L---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L ++ Q P I +D+G+GGGFPG+ +I + +L++S NKK ++ +VQ
Sbjct: 63 LSIAKLVQFKPATKI-LDVGTGGGFPGVPLAILFPQVH---FHLVDSINKKVHAVQAIVQ 118
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
A + A + + I RA+ +L+T
Sbjct: 119 ALALDN--VTIQTARAENLTNQYEFILGRAVTNLETF 153
>gi|327402673|ref|YP_004343511.1| 16S rRNA m(7)G-527 methyltransferase [Fluviicola taffensis DSM
16823]
gi|327318181|gb|AEA42673.1| 16S rRNA m(7)G-527 methyltransferase [Fluviicola taffensis DSM
16823]
Length = 217
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
Y + L Y V ++ E+LE Y W+ +IN++S DF+ HV S
Sbjct: 5 YIKMSVELIEKYFPKLTAVQKKQFERLEELYLF---WNAQINVISRKDTADFYEHHVLHS 61
Query: 63 L---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L ++ + P S+ +D+G+GGGFPGI +I ++ +L++S KK + + Q
Sbjct: 62 LGIAKIMEFAPGSSV-LDIGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKIKVVNEIAQ 117
Query: 120 KTAARGKVFACRIQ-EAPQMITTCDVISARALADLDTLLEYSFPW 163
+ C A + D I +RA+ + L PW
Sbjct: 118 ALDLKN---VCGTHARAEDIKEQFDFIVSRAVTAMPAFL----PW 155
>gi|229087969|ref|ZP_04220076.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
gi|228695338|gb|EEL48216.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
Length = 239
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSPRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ + +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---ITIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARA+A L L E P +
Sbjct: 134 KDGVRESFDIVMARAVARLSVLSELCLPLV 163
>gi|154688205|ref|YP_001423366.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens FZB42]
gi|166224573|sp|A7ZAV9|RSMG_BACA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154354056|gb|ABS76135.1| GidB [Bacillus amyloliquefaciens FZB42]
Length = 239
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S LE+ E +Y + ++W++K+NL S + +D +++H DS+ + + D
Sbjct: 16 SLSDRQLEQFELYYRMLVEWNEKMNLTSITEKKDVYLKHFYDSITAAFYIDFEKVTTLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-----VQKTA---ARGKVFA 129
+G+G GFP + I + V +++S NK+ +FL + ++ T+ R + F
Sbjct: 76 VGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLETLSDALQLEHTSFVHDRAETFG 132
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R + + D+++ARA+A L L E P
Sbjct: 133 QR----KDVRESFDLVTARAVARLSVLSELCLP 161
>gi|319953777|ref|YP_004165044.1| 16S rRNA m(7)g-527 methyltransferase [Cellulophaga algicola DSM
14237]
gi|319422437|gb|ADV49546.1| 16S rRNA m(7)G-527 methyltransferase [Cellulophaga algicola DSM
14237]
Length = 211
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
L+ W+ KIN+VS +++ ++RHV SL + ++H + S ID+G+GGGFPG+ +I
Sbjct: 27 LYKDWNMKINVVSRKDIDELYLRHVLHSLAIAKVHQFLPGSSVIDVGTGGGFPGVPLAIL 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVISARALA 151
LV+ I K ++ V A G I + + + D I +RA+A
Sbjct: 87 FPETHFTLVDAIGKK------IKVVDGVVAGLGLKNVTTINDRVETVKGKFDFIVSRAVA 140
Query: 152 DLDTLLEYS 160
+ T + ++
Sbjct: 141 AMPTFVHWT 149
>gi|90568008|gb|ABD94074.1| At5g50110 [Arabidopsis thaliana]
Length = 208
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRV-------FQLHP---YPSI-WIDLGSGGGFPGIITSI 91
+NL ++ ++ RH+EDSL + + LH + I ID+GSG G PG++ +I
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDLFDHINLIDVGSGAGLPGLVLAI 60
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVFACRIQEAPQMITTCDVI 145
V L+ES NK+ FL +VV T RG+ +C DV
Sbjct: 61 ACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESC--GHDVMYREKFDVA 115
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+A++ L EY P +
Sbjct: 116 IARAVAEMRVLAEYCLPLV 134
>gi|70727673|ref|YP_254589.1| 16S rRNA methyltransferase GidB [Staphylococcus haemolyticus
JCSC1435]
gi|82592865|sp|Q4L2Z4|RSMG_STAHJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68448399|dbj|BAE05983.1| glucose inhibited division protein B [Staphylococcus haemolyticus
JCSC1435]
Length = 240
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + E+ + +Y L ++W++K+NL S + + +++H DS+ + + P D+
Sbjct: 18 LSDKQKEQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDSITPSFYYDFNQPLTICDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFAC 130
G+G GFP I + ++ V +++S NK+ FL ++ + R + F
Sbjct: 78 GAGAGFPSIPLKVVYPELK---VTIVDSLNKRIQFLNHLAAELGLTQVSFVHDRAETFGK 134
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ T DV++ARA+A L L E P +
Sbjct: 135 GVNRE-----TYDVVTARAVARLTVLSELCLPLV 163
>gi|331268196|ref|YP_004394688.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
gi|329124746|gb|AEB74691.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
Length = 243
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQ 92
L W+ K+NL + + E+ +H DS+++FQ + ID+G+GGGFPGI I
Sbjct: 36 LLKDWNSKVNLTAITEDEEIIKKHFIDSMKIFQFEYLKKANKIIDIGTGGGFPGIPMKII 95
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
++ + L++S K+ + L + V+ R + F+ ++ Q D
Sbjct: 96 RPEVQ---MVLLDSLKKRINVLDDILCKIDIDDVETIHGRAEEFSRNVRYREQF----DA 148
Query: 145 ISARALADLDTLLEYSFPWL 164
+ +RA+A+L +L E+ P++
Sbjct: 149 VVSRAVANLASLSEFCLPYV 168
>gi|322379936|ref|ZP_08054213.1| glucose-inhibited division protein B [Helicobacter suis HS5]
gi|321147634|gb|EFX42257.1| glucose-inhibited division protein B [Helicobacter suis HS5]
Length = 179
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ F L L+W+ NL + ++ED H+ DS++V + +D+GSG GFP +
Sbjct: 5 LQRFATLLLEWNCIHNLSGAKSLEDIE-AHINDSIQVLDFIKHFDTCLDIGSGAGFPALP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVIS 146
S+ L+E KK++FL +V A ++ RIQ P I D+I+
Sbjct: 64 LSVFCPHAR---FILVEPNIKKSAFLYHVKNTLALDNLQIKRARIQTLNPLEIEKMDLIT 120
Query: 147 ARALADLDTLLEYSFPWL 164
+RAL LL P+L
Sbjct: 121 SRALMPTQDLLALGMPFL 138
>gi|189466163|ref|ZP_03014948.1| hypothetical protein BACINT_02533 [Bacteroides intestinalis DSM
17393]
gi|189434427|gb|EDV03412.1| hypothetical protein BACINT_02533 [Bacteroides intestinalis DSM
17393]
Length = 206
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWI-DLGSGGGFPGIIT 89
Y L+ W+ KIN++S +E+ + HV SL + ++ + P I DLG+GGGFPGI
Sbjct: 22 LYDLYTDWNAKINVISRKDIENLYEHHVLHSLGIAKVTRFVPGTHIMDLGTGGGFPGIPL 81
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCDVISAR 148
+I ++ +L++S KK V + F R +E Q+ D + +R
Sbjct: 82 AILFPEVK---FHLVDSIGKKVRVATEVANSIGLKNVTFRHARAEEEKQLF---DFVVSR 135
Query: 149 ALADLDTLLE 158
A+ L LL+
Sbjct: 136 AVMPLADLLK 145
>gi|269791772|ref|YP_003316676.1| methyltransferase GidB [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099407|gb|ACZ18394.1| methyltransferase GidB [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 229
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L ++++ +E L + L + K+ L ++ ED W +H+ D + L P +
Sbjct: 5 LAMSFHLVKENEGNLRRYGALLASGNSKVRLTGTAGEEDLWEQHIVDCGALVSLLPRGAR 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA---ARGKVFACR 131
ID+G+GGG PG++ ++ S + V L++S KK + + + + R +V R
Sbjct: 65 VIDVGTGGGLPGMVWALCRSDVG---VTLLDSVGKKCAAVEEMARMMGLEPHRVQVVCSR 121
Query: 132 IQEAPQMITTC-DVISARALADLDTLLEYSFP 162
+E ++ DV ARAL++ L E P
Sbjct: 122 SEEFARLNREVYDVACARALSEAPVLAELLSP 153
>gi|22299247|ref|NP_682494.1| glucose inhibited division protein B [Thermosynechococcus elongatus
BP-1]
gi|29336654|sp|Q8DI86|RSMG_THEEB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22295429|dbj|BAC09256.1| glucose inhibited division protein B [Thermosynechococcus elongatus
BP-1]
Length = 228
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPY-PSIW 75
+ + + E+ + FY L ++ +NL + V DFW +H+ DSLR + L P ++W
Sbjct: 22 WQPTPQQQEQFQRFYGALLAANQGMNLTRITAVPDFWEKHLWDSLRGILPWLQPTGETLW 81
Query: 76 -------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
ID+GSGGGFPG+ +I V L+E+ KK FL
Sbjct: 82 GAKIQQVIDIGSGGGFPGVPVAIARPDWS---VTLLEATQKKVKFL 124
>gi|312623582|ref|YP_004025195.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
gi|312204049|gb|ADQ47376.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
Length = 238
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGGFPGIIT 89
L L+ +K NL + E+F I+H+ DSL + + + + ID+GSG G PG+
Sbjct: 29 LVLEKNKHFNLTAIENEEEFVIKHIADSLSLLKFIEQENSNQNPVAIDIGSGFGAPGLFV 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCDVI 145
I + ++ V L +S KK F+ + G C E + D +
Sbjct: 89 KIAMPNMN---VFLNDSNKKKCKFMNEAKESLGISGVNVVCERAEVLGRKEEFREKFDFV 145
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+ L+ L EY+ P L
Sbjct: 146 FARAVDRLNVLCEYALPLL 164
>gi|262381122|ref|ZP_06074260.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_33B]
gi|262296299|gb|EEY84229.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_33B]
Length = 223
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGG 83
E+ Y L+ W+ KIN++S +E+ + HV SL + + P S+ +DLG+GGG
Sbjct: 34 EQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSV-MDLGTGGG 92
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTC 142
FPGI +I +L++S KK + V + F CR +E Q+
Sbjct: 93 FPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAIGLENISFRHCRGEEEKQLF--- 146
Query: 143 DVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 147 DFVVSRAVMPLADLVK 162
>gi|138897065|ref|YP_001127518.1| 16S rRNA methyltransferase GidB [Geobacillus thermodenitrificans
NG80-2]
gi|196249886|ref|ZP_03148582.1| methyltransferase GidB [Geobacillus sp. G11MC16]
gi|166224591|sp|A4ITW9|RSMG_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134268578|gb|ABO68773.1| Glucose inhibited division protein B [Geobacillus
thermodenitrificans NG80-2]
gi|196210762|gb|EDY05525.1| methyltransferase GidB [Geobacillus sp. G11MC16]
Length = 238
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S + L + E +Y L ++W++K+NL + + +++H DS+ + + P D
Sbjct: 16 SLSSQALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVSPAFYYDFSEPFSLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFA 129
+G+G GFP I I + V++++S K+ FL+++V + R + FA
Sbjct: 76 VGAGAGFPSIPLKICFPHLR---VSIVDSLQKRIRFLQHLVGELGLKDIALYHDRAETFA 132
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
M + DV++ARA+A + L E P
Sbjct: 133 ----RQKGMRESFDVVTARAVARMPVLAELCLP 161
>gi|225076865|ref|ZP_03720064.1| hypothetical protein NEIFLAOT_01916 [Neisseria flavescens
NRL30031/H210]
gi|224951810|gb|EEG33019.1| hypothetical protein NEIFLAOT_01916 [Neisseria flavescens
NRL30031/H210]
Length = 209
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL + L KW+K NL + H+ DSL + + +D+GSGGG PGI
Sbjct: 25 KLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYIEHAQTMLDVGSGGGQPGI 84
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
T+I ++ + L+++ KK +FL+ V + + +V + R++ A DVI+
Sbjct: 85 PTAICRPDLD---ITLLDANTKKTAFLQQAVIELDLKNVRVISGRVEAAAD--CRADVIT 139
Query: 147 ARALADL 153
+RA A+L
Sbjct: 140 SRAFAEL 146
>gi|225028846|ref|ZP_03718038.1| hypothetical protein EUBHAL_03133 [Eubacterium hallii DSM 3353]
gi|224953842|gb|EEG35051.1| hypothetical protein EUBHAL_03133 [Eubacterium hallii DSM 3353]
Length = 238
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D L+A +++ + L + E FY + ++ +K +NL + + ++ +H DSL
Sbjct: 2 DFKEKLKARAEKEGISLTPKQLGQFELFYKMLIETNKSMNLTAITDEDEVIEKHFIDSLS 61
Query: 65 VFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ I ID+G+G GFPGI I I+ L++S NK+ FL+ V +
Sbjct: 62 CRRVVDMSQIRTCIDVGTGAGFPGIPLKIVYPEID---FVLVDSLNKRVKFLKDVKEALG 118
Query: 123 ARG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
G + R ++ + + D+ +RA+A+L L EY P++
Sbjct: 119 LEGLEALHGRAEDLARDKSLRAAFDLCVSRAVANLSVLSEYCVPFV 164
>gi|224438515|ref|ZP_03659435.1| glucose-inhibited division protein B [Helicobacter cinaedi CCUG
18818]
Length = 198
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E ++ + F L+W+K NL +S +E + ++ DSL + +D+GSGGG
Sbjct: 18 ECFKQFQTFGKELLEWNKIHNLTGASCMESV-LENIFDSLYPLKFIDEFESCMDIGSGGG 76
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAP-QMITT 141
FP + +I + LIE + K+ASFL+ + VQ KV + RI+E P +
Sbjct: 77 FPALPLAIAKPQSQ---FFLIEPRAKRASFLQNISVQLGLKNVKVHSMRIEEVPISEVNN 133
Query: 142 CDVISARALADLDTLLEYSFPWL 164
+I++RAL D L+ S +L
Sbjct: 134 IALITSRALMDARNLIALSRKFL 156
>gi|288573694|ref|ZP_06392051.1| methyltransferase GidB [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569435|gb|EFC90992.1| methyltransferase GidB [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 238
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 28 KLEYFYFLFLKWS-KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
KL + + +WS K+ L + W HV DSL +L P+ +D+G+GGG PG
Sbjct: 25 KLRTYSEILARWSSDKVRLTGPKDEDTIWKDHVRDSLYALELLPHSGRLVDVGTGGGLPG 84
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDV 144
+ +I +E + L++S++KK L +V + ++ Q A + D+
Sbjct: 85 LAWAICRPDLE---ITLLDSQSKKTGALESIVSELEVENVSVIWGRSEQLALEEREIYDL 141
Query: 145 ISARALADLDTLLEYSFP 162
+AR +++ + EY P
Sbjct: 142 AAARGVSEAGIVAEYLSP 159
>gi|313144942|ref|ZP_07807135.1| methyltransferase gidB [Helicobacter cinaedi CCUG 18818]
gi|313129973|gb|EFR47590.1| methyltransferase gidB [Helicobacter cinaedi CCUG 18818]
Length = 185
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E ++ + F L+W+K NL +S +E + ++ DSL + +D+GSGGG
Sbjct: 5 ECFKQFQTFGKELLEWNKIHNLTGASCMESV-LENIFDSLYPLKFIDEFESCMDIGSGGG 63
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAP-QMITT 141
FP + +I + LIE + K+ASFL+ + VQ KV + RI+E P +
Sbjct: 64 FPALPLAIAKPQSQ---FFLIEPRAKRASFLQNISVQLGLKNVKVHSMRIEEVPISEVNN 120
Query: 142 CDVISARALADLDTLLEYSFPWL 164
+I++RAL D L+ S +L
Sbjct: 121 IALITSRALMDARNLIALSRKFL 143
>gi|157151065|ref|YP_001449807.1| 16S rRNA methyltransferase GidB [Streptococcus gordonii str.
Challis substr. CH1]
gi|189040724|sp|A8AVJ7|RSMG_STRGC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157075859|gb|ABV10542.1| methyltransferase GidB [Streptococcus gordonii str. Challis substr.
CH1]
Length = 237
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQDHKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|167762775|ref|ZP_02434902.1| hypothetical protein BACSTE_01133 [Bacteroides stercoris ATCC
43183]
gi|167699115|gb|EDS15694.1| hypothetical protein BACSTE_01133 [Bacteroides stercoris ATCC
43183]
Length = 206
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E + Y L+ W+ KIN++S +E+ + HV SL +V + P + +
Sbjct: 10 DLTEEQKRQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRFKPGTKV-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
DLG+GGGFPGI +I ++ LV+ I K +R + + G K R A
Sbjct: 69 DLGTGGGFPGIPLAILFPEVQFHLVDSIGKK------VRVATEIAGSIGLKNVTTRHARA 122
Query: 136 PQMITTCDVISARALADLDTLLE 158
+ D + +RA+ L LL+
Sbjct: 123 EEEKQLFDFVVSRAVMPLTDLLK 145
>gi|218130857|ref|ZP_03459661.1| hypothetical protein BACEGG_02452 [Bacteroides eggerthii DSM 20697]
gi|317476051|ref|ZP_07935303.1| 16S rRNA methyltransferase GidB [Bacteroides eggerthii 1_2_48FAA]
gi|217987201|gb|EEC53532.1| hypothetical protein BACEGG_02452 [Bacteroides eggerthii DSM 20697]
gi|316907689|gb|EFV29391.1| 16S rRNA methyltransferase GidB [Bacteroides eggerthii 1_2_48FAA]
Length = 206
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWI 76
+++ E ++ Y L+ W+ KIN++S +E+ + HV SL + Q+ P I +
Sbjct: 10 DLTEEQKKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAQIIRFKPGTKI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV--QKTAARGKVFACRIQE 134
DLG+GGGFPGI +I ++ LV+ I K + A+ + + + R R +E
Sbjct: 69 DLGTGGGFPGIPLAILFPEVQFHLVDSIGKKVRVATEIANSIGLKNVTTR----HARAEE 124
Query: 135 APQMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L LL+
Sbjct: 125 EKQLF---DFVVSRAVMPLADLLK 145
>gi|189462108|ref|ZP_03010893.1| hypothetical protein BACCOP_02788 [Bacteroides coprocola DSM 17136]
gi|189431189|gb|EDV00174.1| hypothetical protein BACCOP_02788 [Bacteroides coprocola DSM 17136]
Length = 208
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGG 83
E+ Y L+ W+ KIN++S + + + HV SL + Q P I +DLG+GGG
Sbjct: 17 EQFGALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKFIQFKPGTRI-MDLGTGGG 75
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FPGI +I LV+ I K + A+ + + + CR +E QM D
Sbjct: 76 FPGIPLAILFPDSTFHLVDSIGKKVRVATEIANAIGLKNVTTR--HCRAEEEKQMF---D 130
Query: 144 VISARALADLDTLLE 158
+ +RA+ L LL+
Sbjct: 131 FVVSRAVMPLTDLLK 145
>gi|126651988|ref|ZP_01724180.1| glucose-inhibited division protein B [Bacillus sp. B14905]
gi|126591257|gb|EAZ85366.1| glucose-inhibited division protein B [Bacillus sp. B14905]
Length = 238
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI--DL 78
+S + + + + ++ L ++W++K+NL + + +E +++H DS+ + + D+
Sbjct: 17 LSEKQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSISASFYFDFSKVITVCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQ 137
G+G GFP I I + V +++S NK+ +FL ++ + F R +E Q
Sbjct: 77 GAGAGFPSIPIKICFPHLH---VTIVDSLNKRITFLNHLSDELQLENMNFVHARAEEFGQ 133
Query: 138 MIT---TCDVISARALADLDTLLEYSFPWLYQ 166
+ DV++ARA+A L L E P Q
Sbjct: 134 NLKYREQYDVVTARAVARLSVLSELCVPLAKQ 165
>gi|109900603|ref|YP_663858.1| methyltransferase GidB [Pseudoalteromonas atlantica T6c]
gi|123063992|sp|Q15MT4|RSMG_PSEA6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109702884|gb|ABG42804.1| 16S rRNA m(7)G-527 methyltransferase [Pseudoalteromonas atlantica
T6c]
Length = 212
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
V+++ + +L F + KW+K NL S VE ++H+ DS+ V Q H S +ID+G+
Sbjct: 23 VTKDQISQLVGFVQMIDKWNKTYNLTSVRDVESMLLKHIMDSIVVAQ-HLSQSHYIDVGT 81
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
G G PGI +I L L++S K+ F++ V
Sbjct: 82 GPGLPGIPLAIMLPETH---FTLLDSLGKRVRFMKQV 115
>gi|82752288|ref|YP_418029.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus RF122]
gi|123549494|sp|Q2YZC0|RSMG_STAAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82657819|emb|CAI82274.1| glucose inhibited division protein B [Staphylococcus aureus RF122]
Length = 239
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKQQFQTYYCLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
SI D+G+G GFP I I ++ V +++S NK+ FL ++ + + F
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSF-- 123
Query: 131 RIQEAPQMI------TTCDVISARALADLDTLLEYSFPWL 164
I + + + DV++ARA+A L L E P +
Sbjct: 124 -IHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLV 162
>gi|169825319|ref|YP_001692930.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302380961|ref|ZP_07269422.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
gi|193806443|sp|B0S3V0|RSMG_FINM2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167832124|dbj|BAG09040.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302311182|gb|EFK93202.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
Length = 230
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 16 LNTYNVSRET--LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
LN Y++ + ++ L + L L+ +K +NL + + E F ++H DSL V L +
Sbjct: 7 LNDYDIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEE 66
Query: 74 --IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARG 125
ID+G+G GFP I I + ++ L++S K+ FL+ V+ + A
Sbjct: 67 NKTIIDVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLKDVIDELHLTDIKAVHE 123
Query: 126 KVFAC-RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ C R E + C +RA++ LDTL E+ P++
Sbjct: 124 RAEECTRTAEYREQYDYC---ISRAVSKLDTLAEFCLPFV 160
>gi|222056911|ref|YP_002539273.1| methyltransferase GidB [Geobacter sp. FRC-32]
gi|221566200|gb|ACM22172.1| methyltransferase GidB [Geobacter sp. FRC-32]
Length = 210
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+S + +EKL + KW++KINL + + ED I+H DSL + + ++ +D+G
Sbjct: 12 QLSFDQVEKLALYAKELKKWNRKINLTAIKSDEDIVIKHFVDSLVLAKFVKADAMLVDIG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFP I I + ++ V +++ KK F R V + G E Q
Sbjct: 72 SGAGFPCIPLKIIMPALR---VTSVDAVEKKIIFQRNVARLIGLAGFEAVHGRAEQLQPD 128
Query: 140 TTCDVISARALADLDT 155
D + +RA +D+ T
Sbjct: 129 NKADAVVSRAFSDILT 144
>gi|323465552|gb|ADX77705.1| 16S rRNA methyltransferase GidB [Staphylococcus pseudintermedius
ED99]
Length = 239
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+S ++ E +Y + ++W++KINL S + + +++H DS+ H + D+
Sbjct: 17 LSEHQKQQFEKYYEMLVEWNEKINLTSITEKHEVYLKHFYDSITPSFYHDFNQSLNLCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I I V ++++ NK+ FL + + G F A +
Sbjct: 77 GAGAGFPSIPLKIIFPEIH---VTIVDALNKRIQFLNQLAEALELEGVRFVHDRAETFAK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ DV++ARA+A + L E P +
Sbjct: 134 NEDYRASFDVVTARAVARMTVLSELCIPLV 163
>gi|212703470|ref|ZP_03311598.1| hypothetical protein DESPIG_01514 [Desulfovibrio piger ATCC 29098]
gi|212673084|gb|EEB33567.1| hypothetical protein DESPIG_01514 [Desulfovibrio piger ATCC 29098]
Length = 222
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV------FQLHPYPS 73
V L L + L +W+K +NLV + D R V DS + L P
Sbjct: 25 TVPEAALPGLAEYLQLLCRWNKAMNLVGAHHWRDAMQRLVADSFHLATFLDGLPLPEDPL 84
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
W DLGSG G P I + + + G L+E++ K+A FL V+ + G VF R+
Sbjct: 85 CW-DLGSGAGLPAIPLRM---AWQRGTCWLVEAREKRALFLSTVLARVPLPGTHVFRGRV 140
Query: 133 QE-APQMITTCDVISARALADLDTLLEYSFP 162
+ P+ D I++RA LLE P
Sbjct: 141 EHFFPKQARKADCITSRAFMPWPQLLELVAP 171
>gi|304318131|ref|YP_003853276.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779633|gb|ADL70192.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 240
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSIWIDLGSGGG 83
+E+ +Y L L+W++K+NL + + D ++H DSL ++ + ID+G+G G
Sbjct: 25 VEQFIKYYDLLLEWNQKMNLTAITEERDVVVKHFLDSLTAKICKKINGNERIIDVGAGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FP I I S++ + +++S K+ FL +VQ+ ++ R ++ + +
Sbjct: 85 FPSIPLKILYPSLK---LTIVDSLKKRTVFLNELVQQLHLNDVEIIHGRAEDLGKDNSLR 141
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+ +RA+A L+ LLEY P++
Sbjct: 142 EKFDISLSRAVAQLNILLEYCIPFV 166
>gi|242372607|ref|ZP_04818181.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
gi|242349662|gb|EES41263.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
Length = 239
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---- 75
+S+ E+ + +Y L ++W++K+NL S + D +++H DS+ PS +
Sbjct: 16 ELSQTQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFYDSIT-------PSFYYDFD 68
Query: 76 -----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
D+G+G GFP I I ++ V +++S NK+ FL ++ + + F
Sbjct: 69 GDKSICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAELGLQDVSFVH 125
Query: 131 RIQEA---PQMITTCDVISARALADLDTLLEYSFP 162
E+ + D+++ARA+A L L E P
Sbjct: 126 DRAESYGKGDYRESYDIVTARAVARLTVLSELCLP 160
>gi|15925700|ref|NP_373234.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50]
gi|15928295|ref|NP_375828.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus N315]
gi|148269141|ref|YP_001248084.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH9]
gi|150395223|ref|YP_001317898.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH1]
gi|156981025|ref|YP_001443284.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu3]
gi|253316836|ref|ZP_04840049.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007481|ref|ZP_05146082.2| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793534|ref|ZP_05642513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|258411160|ref|ZP_05681439.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|258420936|ref|ZP_05683870.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|258438575|ref|ZP_05689798.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|258443969|ref|ZP_05692307.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|258446215|ref|ZP_05694375.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|258449126|ref|ZP_05697232.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|258454396|ref|ZP_05702364.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|269204347|ref|YP_003283616.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282894275|ref|ZP_06302505.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|282927746|ref|ZP_06335360.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|295406860|ref|ZP_06816664.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|296275691|ref|ZP_06858198.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MR1]
gi|297245895|ref|ZP_06929757.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|54037194|sp|P64240|RSMG_STAAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54041310|sp|P64239|RSMG_STAAM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224617|sp|A7X7A5|RSMG_STAA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040721|sp|A6U593|RSMG_STAA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040722|sp|A5IWD5|RSMG_STAA9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13702667|dbj|BAB43807.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus N315]
gi|14248485|dbj|BAB58872.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu50]
gi|147742210|gb|ABQ50508.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH9]
gi|149947675|gb|ABR53611.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH1]
gi|156723160|dbj|BAF79577.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu3]
gi|257787506|gb|EEV25846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|257840045|gb|EEV64510.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|257843126|gb|EEV67541.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|257848134|gb|EEV72126.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|257850853|gb|EEV74797.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|257855041|gb|EEV77984.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|257857559|gb|EEV80454.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|257863490|gb|EEV86250.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|262076637|gb|ACY12610.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282590506|gb|EFB95584.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|282763320|gb|EFC03450.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|285818373|gb|ADC38860.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus 04-02981]
gi|294968325|gb|EFG44350.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|297177260|gb|EFH36513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|312831048|emb|CBX35890.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129539|gb|EFT85531.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725897|gb|EGG62376.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21172]
Length = 239
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV++ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVTARAVARLSVLSELCLPLI 162
>gi|297618520|ref|YP_003703679.1| methyltransferase GidB [Syntrophothermus lipocalidus DSM 12680]
gi|297146357|gb|ADI03114.1| methyltransferase GidB [Syntrophothermus lipocalidus DSM 12680]
Length = 216
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 24/152 (15%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLGSGGGFPG 86
KL F L + +K++NLVS + +H ED L + + D+GSGGG PG
Sbjct: 6 KLRRFQELLERENKRVNLVSKQMSREELEKHFEDCLEFARYWDATGKLVADIGSGGGLPG 65
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY------------VVQKTAARGKVFACRIQE 134
++ +I S G LIE+ +KK++FL + ++ A G+ R
Sbjct: 66 MVLAIVFSE---GKFCLIEADSKKSAFLTMAGRELNLPNVSVITERVEAIGRDDGFR--- 119
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D + RA+A L+ L+EY P L +
Sbjct: 120 -----AMFDFVLVRAVARLNVLVEYGLPLLKR 146
>gi|281358437|ref|ZP_06244918.1| methyltransferase GidB [Victivallis vadensis ATCC BAA-548]
gi|281315060|gb|EFA99092.1| methyltransferase GidB [Victivallis vadensis ATCC BAA-548]
Length = 221
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 15/133 (11%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWI---DLGSGGGF 84
++ Y L ++ +K +NL E+F I+HV DSL + + P + S ++ D+G G GF
Sbjct: 24 VDKLYELVIETNKTMNLTRIVEPEEFRIKHVADSLAIAREFPEFASEYLKVADIGCGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR------GKVFACRIQEAPQM 138
P ++ ++ +++ V I+S KKA+F+ + Q R G+ +C + +
Sbjct: 84 PSLVLAMAFPNLK---VTPIDSTGKKAAFVDHTAQALGLRNVNVVNGR--SCELNRRSRF 138
Query: 139 ITTCDVISARALA 151
DV++ARA+A
Sbjct: 139 KHQFDVVTARAVA 151
>gi|330718085|ref|ZP_08312685.1| 16S rRNA methyltransferase GidB [Leuconostoc fallax KCTC 3537]
Length = 239
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWIDLGSG 81
+++ +Y L ++ ++ +NL + + + +++H DSL V Q L ID+G+G
Sbjct: 22 VKQFHQYYELLVETNEHVNLTAITEQHEVYLKHFFDSLTVAQYVTSLQTTNQTLIDVGTG 81
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEA 135
GFP + I + V L+++ K+ FL+ VV+ T G+ A I +
Sbjct: 82 AGFPALPLKIAFPQLR---VTLVDALQKRVRFLKTVVEALGLDHVTIVHGR--AEDIGQE 136
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
+ D +ARA+A L EY+ P++
Sbjct: 137 QRFREQFDYATARAVARTSVLAEYTLPFV 165
>gi|300173934|ref|YP_003773100.1| methyltransferase GidB [Leuconostoc gasicomitatum LMG 18811]
gi|299888313|emb|CBL92281.1| Methyltransferase gidB [Leuconostoc gasicomitatum LMG 18811]
Length = 239
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIWI 76
+++ +++ E ++ + + ++ +NL + + D +++H DSL V L I
Sbjct: 17 LTKHQIQQFEDYFDMLIATNEHVNLTAITEKNDVYLKHFYDSLTVSFYEQDLQTAEKTLI 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFP + I ++ + +++S K+ +FL+ VV G ++ R ++
Sbjct: 77 DIGTGAGFPSLPLKIVFPQLK---ITMVDSLQKRINFLQEVVTTLDLSGVEIIHGRAEDI 133
Query: 136 PQMI---TTCDVISARALADLDTLLEYSFPWL 164
Q + D +ARA+A L EY+ P++
Sbjct: 134 GQNLRYREAFDYATARAVARTSVLAEYTLPFV 165
>gi|166368103|ref|YP_001660376.1| glucose inhibited division protein B [Microcystis aeruginosa
NIES-843]
gi|189045859|sp|B0JYE6|RSMG_MICAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166090476|dbj|BAG05184.1| glucose inhibited division protein B [Microcystis aeruginosa
NIES-843]
Length = 225
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 32/171 (18%)
Query: 19 YNVSRETLE---------KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQ 67
+++ +ETLE + + Y L L+ +++ NL + E+FW +H+ DSL +
Sbjct: 7 FDLWQETLEWQPDGAQQARFQQLYDLILEGNQRFNLTRITQPEEFWEKHLWDSLSGLAWL 66
Query: 68 LHPYPSIW------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P + IDLG+G GFPG+ +I V L++S KK +FL V+ K
Sbjct: 67 QKSQPDLLTKSLSVIDLGTGAGFPGVPIAIAYPHWS---VTLLDSTQKKINFLEEVIDKL 123
Query: 122 A--------ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R ++ ++ D++ RA+ ++D + Y+ P+L
Sbjct: 124 ELNNTKTRLGRAEIVGKNLKHN----CAYDIVCLRAVGNVDICVNYALPFL 170
>gi|149371606|ref|ZP_01891022.1| glucose-inhibited division protein B [unidentified eubacterium
SCB49]
gi|149355233|gb|EDM43793.1| glucose-inhibited division protein B [unidentified eubacterium
SCB49]
Length = 232
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L NY + + + KLE Y W+ KIN+VS +++ ++RHV SL + ++
Sbjct: 26 LIKNYFPDLSDTQKNQFIKLEELY---KDWNLKINVVSRKDIDEIYLRHVLHSLGIAKVM 82
Query: 70 PY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ S +D+G+GGGFPG+ +I + LV+ I K K VV++ A +
Sbjct: 83 SFLPGSTVMDVGTGGGFPGVPLAILFPETQFHLVDSIGKKIK-------VVEEVVAGLGL 135
Query: 128 FACRI--QEAPQMITTCDVISARALADLDTLLEY 159
++ A + D I +RA+A ++T + +
Sbjct: 136 TNVKVTNDRAENIDEQYDFIVSRAVAQMETFVRW 169
>gi|329900650|ref|ZP_08272542.1| Ribosomal RNA small subunit methyltransferase G [Oxalobacteraceae
bacterium IMCC9480]
gi|327549426|gb|EGF33990.1| Ribosomal RNA small subunit methyltransferase G [Oxalobacteraceae
bacterium IMCC9480]
Length = 221
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
TLE+L + L KW+ NL + + +H+ D+L + + +D+G+GGG
Sbjct: 29 TLERLIDYVALLAKWNTVYNLTAIRDPQQMVTQHLLDTLAILPAFLHVKHVLDVGAGGGL 88
Query: 85 PGIITSIQLSSIEGGL-VNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTC 142
PG++ +I L ++++++ +KK +FL V V+ V R+ EA ++
Sbjct: 89 PGMVLAIWAQQANPALRISMVDTVHKKTAFLTQVKVELGLTNVTVHTGRV-EALKVTQLF 147
Query: 143 DVISARALADLDTLLEYS 160
DVI++RA A+L + +S
Sbjct: 148 DVITSRAFAELLDFVNWS 165
>gi|282912270|ref|ZP_06320066.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282323966|gb|EFB54282.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|312436863|gb|ADQ75934.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH60]
Length = 239
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL Y+ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNYLASELQLQDVSFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV+ ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVIARAVARLSVLSELCLPLV 162
>gi|327438169|dbj|BAK14534.1| predicted S-adenosylmethionine-dependent methyltransferase
[Solibacillus silvestris StLB046]
Length = 238
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S + + + ++ L ++W++K+NL + + +E +++H DS+ F ++ D
Sbjct: 17 LSEHQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFYDSISASFYFDFTKVTTVC-D 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAP 136
+G+G GFP I I ++ + +++S NK+ +FL ++ + F R +E
Sbjct: 76 VGAGAGFPSIPIKICFPHLQ---ITIVDSLNKRITFLNHLTNELNLDHMTFVHARAEEFG 132
Query: 137 QMIT---TCDVISARALADLDTLLEYSFP 162
Q DV++ARA+A L L E P
Sbjct: 133 QNAAYREKFDVVTARAVARLSVLSELCIP 161
>gi|307823024|ref|ZP_07653254.1| methyltransferase GidB [Methylobacter tundripaludum SV96]
gi|307735799|gb|EFO06646.1| methyltransferase GidB [Methylobacter tundripaludum SV96]
Length = 211
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
NV+ E +++L F L KW+K NL + E+ H+ DSL + H ID+G
Sbjct: 18 NVTDEKIDQLLSFIKLIEKWNKAYNLTAIRDREEMARLHILDSLAIVP-HIEGKRVIDIG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQ 137
+G G PGI +I L I+ L++S KK F++ VV + + +V R++ P+
Sbjct: 77 TGAGLPGIPLAICLPEID---FTLLDSNAKKTRFVQQVVLELKLKNVEVLHSRVENYHPE 133
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
T D + RA A L +++ + L +
Sbjct: 134 --KTYDAVLTRAFAGLSDIVKLTAHLLSK 160
>gi|300769525|ref|ZP_07079411.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300492940|gb|EFK28122.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 244
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWI 76
++ + L + ++ L + +K+ NL + + + +++H DSL V L P
Sbjct: 17 LTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQPLTIC 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-- 133
D+G+G GFP I I ++ V +++S NK+ +FL +VQ+ A G + F R +
Sbjct: 77 DVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQLALTGVQTFHDRAETF 133
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A L L E P +
Sbjct: 134 AGKKSAHRESYDIVTARAVARLSVLSELCLPLV 166
>gi|228474165|ref|ZP_04058902.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|314935196|ref|ZP_07842549.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
gi|228271860|gb|EEK13197.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|313656531|gb|EFS20270.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
Length = 240
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+Y L ++W++K+NL S + + +++H DS+ + + P D+G+G GFP I
Sbjct: 29 YYRLLVEWNEKMNLTSITDEHEVYLKHFYDSITAGFYYDFNQPLTLCDVGAGAGFPSIPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITT 141
I ++ V +++S NK+ FL ++ V R + F + T
Sbjct: 89 KIVFPELK---VTIVDSLNKRIQFLNHLAVELGLTQVSFVHDRAETFGKGVNRE-----T 140
Query: 142 CDVISARALADLDTLLEYSFPWL 164
DV++ARA+A L L E P +
Sbjct: 141 YDVVTARAVARLTVLSELCLPLV 163
>gi|193806479|sp|A9IJ46|RSMG_BORPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 255
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D N LR V +KL + +W++ NL + E ++H+ DSL
Sbjct: 37 ADPNGRLRQACDSLGLRVEAAQADKLLAYLAQMQRWNRTYNLTAIRDPEQMLVQHLFDSL 96
Query: 64 -------RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RV +++ D+GSGGG PG++ +I + + G V+ +E KK +F+R
Sbjct: 97 SVVDPLSRVVGADTAATVY-DIGSGGGLPGVVLAIMRPTWQIGCVDAVE---KKMAFVRQ 152
Query: 117 VVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
+ A + R++E P CDV+ +RA A L+
Sbjct: 153 MSGVLALPNLRALHARVEELPP--AGCDVVISRAFASLN 189
>gi|299541772|ref|ZP_07052095.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
gi|298725510|gb|EFI66151.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
Length = 238
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---------DLGSGG 82
++ L ++W++K+NL + + +E +++H DS+ PS + D+G+G
Sbjct: 28 YFELLVEWNEKMNLTAITDLEGVYLKHFFDSIS-------PSFYFDFSKVITVCDVGAGA 80
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMI-- 139
GFP I I ++ V +++S NK+ +FL ++ + F R +E Q +
Sbjct: 81 GFPSIPIKICFPHLQ---VTIVDSLNKRITFLNHLSDELQLENMHFVHARAEEFGQNLKY 137
Query: 140 -TTCDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A L L E P Q+
Sbjct: 138 REQFDVVTARAVARLSVLAELCVPLAKQE 166
>gi|57865944|ref|YP_187605.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis RP62A]
gi|293367586|ref|ZP_06614239.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|71152076|sp|Q5HS34|RSMG_STAEQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|57636602|gb|AAW53390.1| glucose-inhibited division protein B [Staphylococcus epidermidis
RP62A]
gi|291318299|gb|EFE58692.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736094|gb|EGG72367.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU045]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------ID 77
E+ + +Y L ++W+KK+NL S + D +++H DS+ PS + D
Sbjct: 23 EQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIA-------PSFYYDFNGQLSLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA---CRIQE 134
+G+G GFP I I ++ V +++S NK+ FL ++ + F I
Sbjct: 76 IGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAEIYG 132
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A L L E P +
Sbjct: 133 KGVYRESYDIVTARAVARLTVLSELCLPLV 162
>gi|253733843|ref|ZP_04868008.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
gi|253728146|gb|EES96875.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIQLTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDISFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV++ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVTARAVARLSVLSELCLPLV 162
>gi|242243260|ref|ZP_04797705.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
gi|242233209|gb|EES35521.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------ID 77
E+ + +Y L ++W+KK+NL S + D +++H DS+ PS + D
Sbjct: 23 EQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA-------PSFYYDFNGQLSLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAP 136
+G+G GFP I I ++ V +++S NK+ FL ++ + F R +
Sbjct: 76 IGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYG 132
Query: 137 QMI--TTCDVISARALADLDTLLEYSFP 162
+ + + D+++ARA+A L L E P
Sbjct: 133 KGVYRESYDIVTARAVARLTVLSELCLP 160
>gi|170077371|ref|YP_001734009.1| 16S rRNA methyltransferase GidB [Synechococcus sp. PCC 7002]
gi|169885040|gb|ACA98753.1| glucose inhibited division protein B [Synechococcus sp. PCC 7002]
Length = 249
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PYPSIWIDLGSGG 82
L Y ++++NL ++ EDFW +H+ DS +L P ID+G+GG
Sbjct: 31 LAALYHGICDGNQRLNLTRITSPEDFWEKHLWDSYAALKLDVLAERLTQPQKVIDVGTGG 90
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---EAPQMI 139
GFPGI +I + + L+++ KK +FL + Q A R + + P+
Sbjct: 91 GFPGIPLAIAFPEWQ---ITLLDATRKKINFLVELSQTLQLNTLGIADRAETLGQDPKYR 147
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+ D+ + RA+ +EY P L
Sbjct: 148 ESYDIATIRAVGKASLCVEYLLPLL 172
>gi|329724143|gb|EGG60661.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU144]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------ID 77
E+ + +Y L ++W+KK+NL S + D +++H DS+ PS + D
Sbjct: 23 EQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA-------PSFYYDFNGQLSLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAP 136
+G+G GFP I I ++ V +++S NK+ FL ++ + F R +
Sbjct: 76 IGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYG 132
Query: 137 QMI--TTCDVISARALADLDTLLEYSFP 162
+ + + D+++ARA+A L L E P
Sbjct: 133 KGVYRESYDIVTARAVARLTVLSELCLP 160
>gi|196041983|ref|ZP_03109270.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
gi|196027238|gb|EDX65858.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 21/156 (13%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + + D+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKSFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFAC 130
G+G GFP I I ++ V +++S K+ +FL ++ QK R + F
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 131 R--IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ ++EA D++ ARA+A L L E P +
Sbjct: 134 KEGVREA------YDIVMARAVARLSVLSELCLPLV 163
>gi|152993652|ref|YP_001359373.1| 16S rRNA methyltransferase GidB [Sulfurovum sp. NBC37-1]
gi|189040726|sp|A6QC07|RSMG_SULNB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151425513|dbj|BAF73016.1| glucose inhibited division protein B [Sulfurovum sp. NBC37-1]
Length = 193
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KLE F L +W++ NL + +V + ++ DSL P +D+G+G GFPG+
Sbjct: 18 KLEGFAVLLHEWNQVHNLTGARSVVAIY-DNIVDSLYPLTFIRIPKTLLDVGTGAGFPGL 76
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV-----VQKTAARGKVFACRIQEAPQMITTC 142
+ +I L E V L E K+ SFL+Y ++ K + EA MI++
Sbjct: 77 VLAIALPETE---VVLAEPLKKRVSFLKYAAIDLGLKNVTVEAKRVENVVYEAFDMISSR 133
Query: 143 DVISARALADL-----DTLLEYSF 161
V + + L DL D EY F
Sbjct: 134 AVTNTKLLLDLTSRISDEHTEYLF 157
>gi|34541002|ref|NP_905481.1| 16S rRNA methyltransferase GidB [Porphyromonas gingivalis W83]
gi|55976476|sp|Q7MV10|RSMG_PORGI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34397317|gb|AAQ66380.1| glucose-inhibited division protein B [Porphyromonas gingivalis W83]
Length = 221
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
++S E+ E L+ W+ IN++S +++ ++ HV SL R+ P S+ +
Sbjct: 24 HLSERQREQFEQMGGLYTHWNALINVISRKDIDNLYLHHVLHSLGIARMLNFKPGTSV-L 82
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I + LV+ I K K AS + + R CR A
Sbjct: 83 DLGTGGGFPGIPLAILFPQVSFLLVDSIGKKVKVASAVAEALGLDNVR--TMHCR---AE 137
Query: 137 QMITTCDVISARALADLDTL 156
+ D I +RA+ L L
Sbjct: 138 SIGEKFDFIVSRAVMKLSEL 157
>gi|319399919|gb|EFV88165.1| methyltransferase GidB [Staphylococcus epidermidis FRI909]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------ID 77
E+ + +Y L ++W+KK+NL S + D +++H DS+ PS + D
Sbjct: 23 EQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIA-------PSFYYDFNGQLSLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAP 136
+G+G GFP I I ++ V +++S NK+ FL ++ + F R +
Sbjct: 76 IGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYG 132
Query: 137 QMI--TTCDVISARALADLDTLLEYSFP 162
+ + + D+++ARA+A L L E P
Sbjct: 133 KGVYRESYDIVTARAVARLTVLSELCLP 160
>gi|27469333|ref|NP_765970.1| glucose-inhibited division protein B [Staphylococcus epidermidis
ATCC 12228]
gi|251811359|ref|ZP_04825832.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|282874716|ref|ZP_06283595.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|29336633|sp|Q8CMN7|RSMG_STAES RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27316883|gb|AAO06058.1|AE016752_91 glucose inhibited division protein B [Staphylococcus epidermidis
ATCC 12228]
gi|251805108|gb|EES57765.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296432|gb|EFA88947.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|329735756|gb|EGG72037.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU028]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------ID 77
E+ + +Y L ++W+KK+NL S + D +++H DS+ PS + D
Sbjct: 23 EQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIA-------PSFYYDFNGQLSLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAP 136
+G+G GFP I I ++ V +++S NK+ FL ++ + F R +
Sbjct: 76 IGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVSFVHDRAETYG 132
Query: 137 QMI--TTCDVISARALADLDTLLEYSFP 162
+ + + D+++ARA+A L L E P
Sbjct: 133 KGVYRESYDIVTARAVARLTVLSELCLP 160
>gi|257792844|ref|YP_003183450.1| methyltransferase GidB [Eggerthella lenta DSM 2243]
gi|257476741|gb|ACV57061.1| methyltransferase GidB [Eggerthella lenta DSM 2243]
Length = 213
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-RVFQLHPYP-SIWIDLGS 80
RE L L+ L ++ +K N+ ST ++ + HV+DSL + +L P +D+GS
Sbjct: 2 REDL--LKRHLELVIEANKTTNITRISTWDEGMLLHVQDSLVGLPELREAPEGRMVDIGS 59
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQM 138
G G+PGI +I+ G L +S KK + L +VQ V+ RI++ A +
Sbjct: 60 GAGYPGIPLAIE----SGRSTLLADSVGKKTAILASMVQTLGLDNVDVYTGRIEDLAREE 115
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ARALA L L+E++ P L +
Sbjct: 116 PASFAAVTARALAQLSILMEFASPLLQE 143
>gi|87125379|ref|ZP_01081225.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9917]
gi|86167148|gb|EAQ68409.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9917]
Length = 250
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 28 KLEYFYFL---FLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWIDLGS 80
+LE F L W++++NL DFW+ V DSL Q P ID+G+
Sbjct: 26 QLEQFVTLQEELRSWNQRVNLTRLVEGADFWVAQVLDSLWPLLNELQAPQTPLRCIDVGT 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVFACRIQ---EA 135
GGGFPG+ +I ++ G + L++S +K + + + A R +V RI+ +
Sbjct: 86 GGGFPGLAVAI---ALPGARLTLVDSVGRKTAAVMAMADSLGLADRVQVRTERIERTGQD 142
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
P D ARA+A + EY P L QK
Sbjct: 143 PACRGRFDRAMARAVASAPVVAEYLVP-LLQK 173
>gi|295106386|emb|CBL03929.1| 16S rRNA m(7)G-527 methyltransferase [Gordonibacter pamelaeae
7-10-1-b]
Length = 217
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYP-SIWIDLGSGGGF 84
E ++ + L+ ++K NL S++++ H+EDSL + L+ P ++ DLGSGGGF
Sbjct: 5 ELIDLYLEKILEANEKTNLTRISSLDEARKLHIEDSLAGLEELNKAPEGLYGDLGSGGGF 64
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVFACRIQE-APQMITT 141
PG+ +++ G L++S KK + + V+ + A + + RI++ A +
Sbjct: 65 PGVPLALE----SGRKTVLVDSVQKKMAIVGSVLSELGIAEQVSTYGGRIEDLAHERPCA 120
Query: 142 CDVISARALADLDTLLEYSFPWL 164
++ARAL+ L L+E + P L
Sbjct: 121 FTALTARALSKLSVLMELASPLL 143
>gi|291486739|dbj|BAI87814.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
natto BEST195]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ + + D
Sbjct: 16 SLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFNQVNTICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I + V +++S NK+ +FL + + + A
Sbjct: 76 VGAGAGFPSLPIKICFPHLN---VTIVDSLNKRITFLEKLSEALQLENTTYCHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D+++ARA+A L L E P +
Sbjct: 133 QRKDVRESYDIVTARAVARLSVLSELCLPLV 163
>gi|319938660|ref|ZP_08013024.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
gi|319811710|gb|EFW07976.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
Length = 237
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED-SLRVFQ-LHPYPSI-WIDLGSGGG 83
++ E+++ L ++W++KINL + + ++ +++H D S + Q L +I +D+G+G G
Sbjct: 23 QQFEHYFELLVEWNEKINLTAITDKKEVYLKHFYDSSAPILQGLIENKNIKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMI 139
FP + I +++ V +I+S NK+ FL ++ + F A +
Sbjct: 83 FPSLPMKILYPALD---VTIIDSLNKRILFLNHLADELGLENVHFYHGRAEDFAQDKDFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDIVTARAVARMQVLAELTIPFL 164
>gi|21284357|ref|NP_647445.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MW2]
gi|49487487|ref|YP_044708.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651104|ref|YP_187522.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus COL]
gi|87161954|ref|YP_495278.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196665|ref|YP_501496.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151222822|ref|YP_001333644.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161510919|ref|YP_001576578.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253730395|ref|ZP_04864560.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|258451371|ref|ZP_05699402.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|262049465|ref|ZP_06022337.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|262051896|ref|ZP_06024111.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|282920715|ref|ZP_06328434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|284023033|ref|ZP_06377431.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 132]
gi|294849824|ref|ZP_06790564.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|297209456|ref|ZP_06925854.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911480|ref|ZP_07128929.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|23821578|sp|Q8NUF9|RSMG_STAAW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976399|sp|Q6G5W6|RSMG_STAAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71152075|sp|Q5HCI5|RSMG_STAAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122538498|sp|Q2FUQ4|RSMG_STAA8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123484189|sp|Q2FDF0|RSMG_STAA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|172049079|sp|A6QKK0|RSMG_STAAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040723|sp|A8YYR9|RSMG_STAAT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21205801|dbj|BAB96493.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus MW2]
gi|49245930|emb|CAG44411.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285290|gb|AAW37384.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus COL]
gi|87127928|gb|ABD22442.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87204223|gb|ABD32033.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150375622|dbj|BAF68882.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160369728|gb|ABX30699.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253725875|gb|EES94604.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|257860901|gb|EEV83718.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|259160223|gb|EEW45252.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|259162462|gb|EEW47032.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|282594123|gb|EFB99111.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|294823372|gb|EFG39801.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|296885917|gb|EFH24852.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887659|gb|EFK82855.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|315197914|gb|EFU28247.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141413|gb|EFW33256.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144396|gb|EFW36161.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329731847|gb|EGG68207.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21189]
gi|329732581|gb|EGG68931.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21193]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIQLTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV++ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVTARAVARLSVLSELCLPLV 162
>gi|205371921|ref|ZP_03224741.1| glucose-inhibited division protein B [Bacillus coahuilensis m4-4]
Length = 224
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--ID 77
++S LE+ E ++ + ++W++K+NL + + E+ +++H DS+ + + D
Sbjct: 16 SLSPRQLEQFEQYFSILVEWNEKMNLTAITDREEVYLKHFFDSISAAFYYDFSKDLHICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I I+ V++++S NK+ FL ++ + F A
Sbjct: 76 VGAGAGFPSIPLKICFPHIK---VSIVDSLNKRIQFLNFLGNELGLEHVYFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFP 162
+ DV++ARA+A L L E P
Sbjct: 133 QNSDHREKYDVVTARAVARLSVLSELCLP 161
>gi|317489237|ref|ZP_07947754.1| glucose inhibited division protein [Eggerthella sp. 1_3_56FAA]
gi|325832342|ref|ZP_08165341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Eggerthella sp.
HGA1]
gi|316911638|gb|EFV33230.1| glucose inhibited division protein [Eggerthella sp. 1_3_56FAA]
gi|325486178|gb|EGC88632.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Eggerthella sp.
HGA1]
Length = 213
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-RVFQLHPYP-SIWIDLGS 80
RE L L+ L ++ +K N+ ST ++ + HV+DSL + +L P +D+GS
Sbjct: 2 REDL--LKRHLELVIEANKTTNITRISTWDEGMLLHVQDSLVGLPELREAPEGRMVDIGS 59
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQM 138
G G+PGI +I+ G L +S KK + L +VQ V+ RI++ A +
Sbjct: 60 GAGYPGIPLAIE----SGRSTLLADSVGKKTTILASMVQTLGLDNVDVYTGRIEDLAREE 115
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ARALA L L+E++ P L +
Sbjct: 116 PASFAAVTARALAQLSILMEFASPLLQE 143
>gi|283471924|emb|CAQ51135.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ST398]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV++ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVTARAVARLSVLSELCLPLV 162
>gi|282902627|ref|ZP_06310520.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|282918064|ref|ZP_06325814.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282921286|ref|ZP_06329004.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|283767786|ref|ZP_06340701.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
gi|282315701|gb|EFB46085.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|282318349|gb|EFB48709.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282597086|gb|EFC02045.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|283461665|gb|EFC08749.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV++ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVTARAVARLSVLSELCLPLV 162
>gi|163782943|ref|ZP_02177938.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
gi|159881623|gb|EDP75132.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
Length = 202
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYP 72
+ +S+E EK + +W++ NL S E+ RH DSL + + +
Sbjct: 14 FELSQEDAEKFGLYLEELKRWNRVHNLTSVKKDEEIVRRHFIDSLSLVRCFVELGVRWQG 73
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
++ D+GSG GFPG+ I L IE + LIES +KK SFL Y+ + V R
Sbjct: 74 KVFADVGSGAGFPGVPLKIYLKDIE---LFLIESVSKKCSFLEYLKLRLNMDWTVICER- 129
Query: 133 QEAPQMITTCDVISARALADLDTL 156
A ++ + D++ +RA+ + + +
Sbjct: 130 --AERVDRSFDIVVSRAMGEFEEI 151
>gi|328958782|ref|YP_004376168.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
gi|328675106|gb|AEB31152.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
Length = 238
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
V+ + +E+ + + L +W+ KINL + + E+ +++H DS+ D
Sbjct: 17 VTEKQMEQFDQYLKLLQEWNGKINLTAITQKEEVYLKHFYDSITAGLYVDFTKGVQSLCD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I +E V +++S NK+ FL + Q G F A
Sbjct: 77 VGAGAGFPSIPLKIIFPQLE---VTIVDSLNKRIQFLTLLAQTLELDGVHFYHDRAETFG 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ Q + D ++ARA+A + L E P +
Sbjct: 134 QNKQFRESFDFVTARAVARMSVLSELCLPLV 164
>gi|325297809|ref|YP_004257726.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
salanitronis DSM 18170]
gi|324317362|gb|ADY35253.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
salanitronis DSM 18170]
Length = 210
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLH 69
NY + + +E L + L+ W+ KIN++S + + + H+ SL +V
Sbjct: 9 NYFPDLTDTQKEQFAAL---WDLYTYWNSKINVISRKDIGNLYEHHILHSLGIAKVIHFR 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +DLG+GGGFPGI +I + LV+ I K K A+ + ++ +
Sbjct: 66 PGTEV-MDLGTGGGFPGIPLAILFPEVSFHLVDSIGKKVKVATEVANAIELKNVTAR--H 122
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLE 158
CR +E +M D + +RA+ L L++
Sbjct: 123 CRAEEEKRMF---DFVVSRAVMPLPDLIK 148
>gi|258423242|ref|ZP_05686134.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|257846571|gb|EEV70593.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|302334324|gb|ADL24517.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus JKD6159]
gi|323439703|gb|EGA97421.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O11]
gi|323443276|gb|EGB00893.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O46]
Length = 239
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV++ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVTARAVARLSVLSELCLPLV 162
>gi|303234724|ref|ZP_07321352.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
gi|302494207|gb|EFL53985.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
Length = 230
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 16 LNTYNVSRET--LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
LN Y++ + ++ L + L L+ +K +NL + + E F ++H DSL V L +
Sbjct: 7 LNDYDIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEE 66
Query: 74 --IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARG 125
ID+G+G GFP I I + ++ L++S K+ FL+ V+ + A
Sbjct: 67 NKTIIDVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLKDVIDELHLTEIKAVHE 123
Query: 126 KVFAC-RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ C R E + C +RA++ LDTL E+ P++
Sbjct: 124 RAEECTRTAEYRERYDYC---ISRAVSKLDTLAEFCLPFV 160
>gi|256618560|ref|ZP_05475406.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|257087803|ref|ZP_05582164.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300861419|ref|ZP_07107503.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
gi|256598087|gb|EEU17263.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|256995833|gb|EEU83135.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300848880|gb|EFK76633.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
Length = 238
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D+
Sbjct: 17 LTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ---E 134
G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R + +
Sbjct: 77 GAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQ 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A L+ L E P +
Sbjct: 134 KAEFRGAFDYVTARAVARLNVLSELCLPLV 163
>gi|261420900|ref|YP_003254582.1| 16S rRNA methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|319768571|ref|YP_004134072.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
gi|261377357|gb|ACX80100.1| methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|317113437|gb|ADU95929.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
Length = 238
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 17/154 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S L + E +Y L ++W++K+NL + + +++H DS+ + + P D+
Sbjct: 17 LSSRALAQFERYYELLVEWNEKMNLTAITDKLGVYVKHFFDSVSPAFYYDFSAPLALCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFAC 130
GSG GFP + I + V++++S K+ FL +++ + R + FA
Sbjct: 77 GSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLITELGLADVALYHERAETFA- 132
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
M + DV++ARA+A + L+E P +
Sbjct: 133 ---RQKGMRESFDVVTARAVARMPVLVELCLPLV 163
>gi|315579758|gb|EFU91949.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0630]
Length = 275
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 78 ELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 137
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 138 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 194
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D ++ARA+A L+ L E P + ++
Sbjct: 195 QKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 228
>gi|315026604|gb|EFT38536.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2137]
Length = 291
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 69 ELTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 128
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 129 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 185
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 186 QKAEFRGAFDYVTARAVARLNVLSELCLPLV 216
>gi|254417639|ref|ZP_05031373.1| methyltransferase GidB [Microcoleus chthonoplastes PCC 7420]
gi|196175557|gb|EDX70587.1| methyltransferase GidB [Microcoleus chthonoplastes PCC 7420]
Length = 224
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWIDLGSGG 82
++ + Y L ++++NL + ++FW +H+ DSLR + P ID+G+G
Sbjct: 23 QQFQRLYAGILAGNRQLNLTRITQPDEFWEKHLWDSLRGVASLLSGEEKPLNIIDIGTGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQM 138
GFPG+ +I L S V L++S KK +FL ++ + A A ++ + Q
Sbjct: 83 GFPGLPVAIALPSSS---VTLLDSTRKKITFLDSLIPQLAIPNATTVLGRAEKVGQQRQH 139
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
D+ RA+ +Y+ P++
Sbjct: 140 HQRYDIALVRAVGSASACADYALPFV 165
>gi|332361813|gb|EGJ39617.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1056]
Length = 237
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|325690245|gb|EGD32249.1| glucose inhibited division protein B [Streptococcus sanguinis
SK115]
Length = 237
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIENQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|148243045|ref|YP_001228202.1| 16S rRNA methyltransferase GidB [Synechococcus sp. RCC307]
gi|166989556|sp|A5GVE0|RSMG_SYNR3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147851355|emb|CAK28849.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Synechococcus sp. RCC307]
Length = 237
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----P 72
T+ S + L++ L +W+ K+NL ED+WI + DSL + L P+ P
Sbjct: 11 TWQPSSDQLQQFNRLQELLREWNGKVNLTRLVEGEDYWISQIFDSL--WPLQPWLSKGEP 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
ID+G+GGGFPG+ +I L + LV+ + K
Sbjct: 69 LKVIDVGTGGGFPGLAIAIALPQAQLTLVDSVGRK 103
>gi|116071160|ref|ZP_01468429.1| Glucose inhibited division protein [Synechococcus sp. BL107]
gi|116066565|gb|EAU72322.1| Glucose inhibited division protein [Synechococcus sp. BL107]
Length = 243
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PY-PSI 74
+ S E +++L L +W+ K+NL +D+WI V DSL P+ P
Sbjct: 16 WQPSTEQVDQLAMLQVLLREWNAKVNLTRLVEGDDYWINQVFDSLWPLAAELNKPHQPRT 75
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+D+G+GGGFPG+ +I L G + L++S +K + + + K
Sbjct: 76 CMDVGTGGGFPGLAIAIALP---GAHMTLLDSVGRKTAAVEAMASK 118
>gi|26986748|ref|NP_742173.1| 16S rRNA methyltransferase GidB [Pseudomonas putida KT2440]
gi|148550505|ref|YP_001270607.1| 16S rRNA methyltransferase GidB [Pseudomonas putida F1]
gi|60392324|sp|P0A124|RSMG_PSEPK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|60392325|sp|P0A125|RSMG_PSEPU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|166224604|sp|A5WBB3|RSMG_PSEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24981338|gb|AAN65637.1|AE016190_3 glucose-inhibited division protein B [Pseudomonas putida KT2440]
gi|581464|emb|CAA44420.1| unnamed protein product [Pseudomonas putida]
gi|148514563|gb|ABQ81423.1| methyltransferase GidB [Pseudomonas putida F1]
Length = 216
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
++ E EKL + L +KW+K NL + ++ RH+ DSL V +H W+D+G
Sbjct: 24 LTAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIHNDRDNWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGG PGI +I V ++++ KK FL V + V R+ EA Q
Sbjct: 84 SGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTVIHSRV-EAFQP 139
Query: 139 ITTCDVISARALADLDTLLEYS 160
D I +RA + ++ ++
Sbjct: 140 AQPFDGIISRAFSSMENFTNWT 161
>gi|314934965|ref|ZP_07842324.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
gi|313652895|gb|EFS16658.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
Length = 239
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---- 75
+S E+ + +Y L ++W++K+NL S + D +++H DS+ PS +
Sbjct: 16 ELSETQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFYDSIT-------PSFYYDFD 68
Query: 76 -----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
D+G+G GFP I I ++ V +++S NK+ FL ++ + + F
Sbjct: 69 GELSICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAELGLQDVSFVH 125
Query: 131 RIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
E+ + D+++ARA+A L L E P +
Sbjct: 126 DRAESYGKGAYRESYDIVTARAVARLTVLSELCLPLV 162
>gi|56965872|ref|YP_177606.1| 16S rRNA methyltransferase GidB [Bacillus clausii KSM-K16]
gi|81600611|sp|Q5WAG5|RSMG_BACSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56912118|dbj|BAD66646.1| glucose inhibited division protein B [Bacillus clausii KSM-K16]
Length = 237
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGFP 85
E+ + ++ L ++W++K+NL + + +D +++H DS+ +P+ I D+G+G GFP
Sbjct: 23 EQFKRYFELLVEWNEKMNLTAITEKKDVYLKHFYDSITPSFYYPFTDQKIVDIGAGAGFP 82
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITT 141
+ I ++ +++I+S NK+ FL ++ + G F A ++
Sbjct: 83 SLPLKILYPDLQ---ISIIDSLNKRIGFLTHLANELELTGVSFYHDRAELAGKSKHHREI 139
Query: 142 CDVISARALADLDTLLEYSFPWL 164
DV ARA+A + L E P++
Sbjct: 140 YDVAIARAVARMSVLSELCLPFV 162
>gi|325104561|ref|YP_004274215.1| 16S rRNA m(7)G-527 methyltransferase [Pedobacter saltans DSM 12145]
gi|324973409|gb|ADY52393.1| 16S rRNA m(7)G-527 methyltransferase [Pedobacter saltans DSM 12145]
Length = 210
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 22/152 (14%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDL 78
+E ++KL YFL W+ +IN++S ++ + RH+ SL +V + P S+ +D+
Sbjct: 17 QKEQIDKLFDLYFL---WNSQINVISRKDIDLLYERHILHSLAIAKVCEFKPGQSV-LDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG---KVFACRIQEA 135
G+GGGFPGI +I + LV+ I K K S A+G K A
Sbjct: 73 GTGGGFPGIPLAILFPETKFHLVDSIGKKIKVVS--------EVAKGIGLKNLKATHSRA 124
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q+ D + +RA+ L +PW+ K
Sbjct: 125 EQIDEKFDFVVSRAVTQLKDF----YPWIRDK 152
>gi|229495898|ref|ZP_04389624.1| 16S rRNA methyltransferase GidB [Porphyromonas endodontalis ATCC
35406]
gi|229317211|gb|EEN83118.1| 16S rRNA methyltransferase GidB [Porphyromonas endodontalis ATCC
35406]
Length = 213
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
V+ + E+ + L+ W+ KIN++S +++ ++ HV SL V ++ + S ID+
Sbjct: 17 VNEQQREQFAALWELYTDWNSKINVISRKDIDNLYMHHVLHSLGVTKMLHFTAGSHVIDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+GGGFPGI +I ++ L++S KK + V + RI+E
Sbjct: 77 GTGGGFPGIPLAILFPEVQ---FTLVDSIGKKVRVAQSVADSLGLQNVTTHHIRIEE--- 130
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ CD + RA L L++ +
Sbjct: 131 LREKCDFVVTRATMLLGELVKLT 153
>gi|328952572|ref|YP_004369906.1| Ribosomal RNA small subunit methyltransferase G [Desulfobacca
acetoxidans DSM 11109]
gi|328452896|gb|AEB08725.1| Ribosomal RNA small subunit methyltransferase G [Desulfobacca
acetoxidans DSM 11109]
Length = 226
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ S ET+ + + L+W+ ++NL T D ++H DSL V+ + D+G
Sbjct: 26 STSPETIRQFLVYCDELLRWNARVNLTGLKTASDVVVKHFLDSLAVWPWVRDLTSLADIG 85
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+G GFPG+ + L + + L+E KK++FLRY+
Sbjct: 86 TGAGFPGLALKLALPHLH---LTLLEPTGKKSTFLRYLT 121
>gi|313496412|gb|ADR57778.1| RsmG [Pseudomonas putida BIRD-1]
Length = 216
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
++ E EKL + L +KW+K NL + ++ RH+ DSL V +H W+D+G
Sbjct: 24 LTAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIHNGRDNWLDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG PGI +I V ++++ KK FL V + + EA Q
Sbjct: 84 SGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELRLDNLMVIHSRVEAFQPA 140
Query: 140 TTCDVISARALADLDTLLEYS 160
D I +RA + ++ ++
Sbjct: 141 QPFDGIISRAFSSMENFTNWT 161
>gi|149194230|ref|ZP_01871327.1| Glucose inhibited division protein [Caminibacter mediatlanticus
TB-2]
gi|149135405|gb|EDM23884.1| Glucose inhibited division protein [Caminibacter mediatlanticus
TB-2]
Length = 176
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ K E F LKW+K L + + ED + +EDSL + ID+G+G GFP
Sbjct: 1 MNKFEIFTNELLKWNKTHKLTNYN--EDEIKKQIEDSLYPLEKIKDSKTAIDIGTGAGFP 58
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
G+I +I + + + LV E K+ SFL Y+ + +V R+++A + D+
Sbjct: 59 GLILAIAMPNTKWYLV---EPLKKRYSFLNYIKTILNLKNVEVIPNRVEKA--NLPKVDL 113
Query: 145 ISARALADLDTLLEYSFPWL 164
I++RA+ + +L+ P+L
Sbjct: 114 ITSRAVMKTNDILKIIKPFL 133
>gi|227502236|ref|ZP_03932285.1| glucose-inhibited division protein [Corynebacterium accolens ATCC
49725]
gi|227077060|gb|EEI15023.1| glucose-inhibited division protein [Corynebacterium accolens ATCC
49725]
Length = 202
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
EY L S + + V W RH+ + + Q+ P + ID+GSG G PGI
Sbjct: 19 EYHDSLATDGSTR-GFIGPREVPRLWERHILNCAVIEQVIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVIS 146
+I + + LIE K+ ++L V + V R +E P + + DV++
Sbjct: 78 AIARPDLH---ITLIEPLLKRYNYLNEVTENLGLDNVTVLRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|262282118|ref|ZP_06059887.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
gi|262262572|gb|EEY81269.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
Length = 237
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|325278905|ref|YP_004251447.1| Ribosomal RNA small subunit methyltransferase G [Odoribacter
splanchnicus DSM 20712]
gi|324310714|gb|ADY31267.1| Ribosomal RNA small subunit methyltransferase G [Odoribacter
splanchnicus DSM 20712]
Length = 209
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLH 69
+Y RE +LE Y +W++KIN++S +++FW+ HV SL ++ +
Sbjct: 9 DYFPELTEEQRERFARLEGLY---REWNEKINVISRKDMDEFWVHHVLHSLAIAKIIRFA 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
P + +D+G+GGGFPGI +I + L++ I K K +R
Sbjct: 66 PGTRV-MDVGTGGGFPGIPLAILFPEVNFYLIDSIGKKIKVVEGIR 110
>gi|330752161|emb|CBL87121.1| glucose-inhibited division protein B [uncultured Flavobacteria
bacterium]
Length = 207
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDL 78
++ + ++K+ L+ W+ +IN++S S ++ W H+ SL + L P +DL
Sbjct: 17 LTADAVDKINSLPSLYGFWNNQINVISRSDQDEIWKHHIIHSLVLGNLIPISKGLRVLDL 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I IE L++S KK + +V++ R + + A +
Sbjct: 77 GTGGGFPGIPLAIAFPEIE---FILVDSIGKKIKVVNAIVKEL--RLENVSAIHSRAESL 131
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ D+I RA+A ++ L+ + KK
Sbjct: 132 DDSFDIIITRAVASIEKLVSLTKNLFTDKK 161
>gi|300866835|ref|ZP_07111513.1| Ribosomal RNA small subunit methyltransferase G [Oscillatoria sp.
PCC 6506]
gi|300335185|emb|CBN56673.1| Ribosomal RNA small subunit methyltransferase G [Oscillatoria sp.
PCC 6506]
Length = 236
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR------------- 64
++ + E + + Y L + +K +NL + +FW +H+ DSLR
Sbjct: 19 SWQPNDEQQRQFQQLYELIIDGNKHLNLTRITEPLEFWEKHLWDSLRGIAPLLSPNNLGA 78
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L P + ID+G+G GFPG+ +I L + V L++ KK SFL +V +
Sbjct: 79 IDELPLKPMQKV-IDIGTGAGFPGLPIAIALPNFT---VTLLDGTRKKISFLETLVPELG 134
Query: 123 ARGKV----FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ V + I PQ D+ RA+A +YS P L
Sbjct: 135 IKNAVPLIGRSEEIAHQPQHRQFYDLAFLRAVASASICAKYSLPLL 180
>gi|33151284|ref|NP_872637.1| glucose-inhibited division protein B [Haemophilus ducreyi 35000HP]
gi|55976490|sp|Q7VPP8|RSMG_HAEDU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33147504|gb|AAP95026.1| glucose inhibited division protein B [Haemophilus ducreyi 35000HP]
Length = 203
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E+L F L KW+K NL S E+ ++H+ DSL V +H +ID+G+G G PG
Sbjct: 22 EQLIGFVHLLHKWNKAYNLTSVRDPEEMLVKHIMDSL-VVSVHLQGQSFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVI 145
I +I ++ + V L++S K+ +F++ V+++ A R+++ D +
Sbjct: 81 IPLAI--ANPDKQFV-LLDSLGKRITFIKQVLRELAITNVTPVLSRVEQY--TARQFDGV 135
Query: 146 SARALADLDTLLE--YSFP 162
+RA A LD +L Y+ P
Sbjct: 136 LSRAFASLDDMLNWCYALP 154
>gi|295090266|emb|CBK76373.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium cf.
saccharolyticum K10]
Length = 242
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWI 76
++ + +E+ +Y L +W++ +NL + + + + +H DSL V L
Sbjct: 20 LTEKQMEQFFRYYELLNEWNQVMNLTAITEMSEVVTKHFVDSLALKRAVDGLETEAFSVA 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFAC 130
D+G+G GFPGI I + V L++S NK+ FL V+ + TA G+
Sbjct: 80 DVGTGAGFPGIPLKIAFPGLR---VTLLDSLNKRVKFLNTVISELGLEGITAVHGRAEDF 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ T D+ +RA+A+L TL EY P +
Sbjct: 137 GRNRVSR--ETFDICVSRAVANLSTLSEYCMPLV 168
>gi|223043474|ref|ZP_03613520.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
gi|222443263|gb|EEE49362.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
Length = 239
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 22/167 (13%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L N + +S E+ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LSKNLSEHGIELSETQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFFDSIT----- 60
Query: 70 PYPSIW---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
PS + D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 61 --PSFYYDFDGELCICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAE 115
Query: 121 TAARGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
+ F E+ + D+++ARA+A L L E P +
Sbjct: 116 LGLQDVSFVHDRAESYGKGAYRESYDIVTARAVARLTVLSELCLPLV 162
>gi|110004186|emb|CAK98524.1| putative glucose inhibited division methyltransferase protein b
[Spiroplasma citri]
Length = 232
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVFQLHPYP 72
L ++ E ++L+ +Y ++ ++ +NL + E+ +++H DS L+ F
Sbjct: 9 LPALQITPEQEKQLQVYYQYLIEQNQIMNLTTIIKEEEVYLKHFLDSGLLLKEFSFSKEM 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
++ D+GSG GFPG++ I +I+ + +IES K+ FL+ +V K +G ++ R
Sbjct: 69 TVS-DVGSGAGFPGLVLKILCPTIK---LTIIESLEKRCLFLQRLVLKLQLKGVEIIHAR 124
Query: 132 IQEAP-QMITTCDVISARALADLDTLLE 158
+E + D++ +RA+A+L LLE
Sbjct: 125 AEEYSWAHSESFDIVVSRAVANLGMLLE 152
>gi|324995236|gb|EGC27148.1| glucose inhibited division protein B [Streptococcus sanguinis
SK678]
Length = 237
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQDLKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AKFDLVTARAVARMQVLSELTIPYL 164
>gi|323352787|ref|ZP_08087757.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
gi|322121823|gb|EFX93569.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
Length = 237
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELSLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|308181815|ref|YP_003925943.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|308047306|gb|ADN99849.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 244
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWI 76
++ + L + ++ L + +K+ NL + + + +++H DSL V L P
Sbjct: 17 LTAKQLGQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQPLTIC 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-- 133
D+G+G GFP I I ++ V +++S NK+ +FL +VQ+ G K F R +
Sbjct: 77 DVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQLGLTGVKTFHDRAETF 133
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A L L E P +
Sbjct: 134 AGKKSAHRESYDIVTARAVARLSVLSELCLPLV 166
>gi|312876171|ref|ZP_07736158.1| methyltransferase GidB [Caldicellulosiruptor lactoaceticus 6A]
gi|311796986|gb|EFR13328.1| methyltransferase GidB [Caldicellulosiruptor lactoaceticus 6A]
Length = 239
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGGFPGIIT 89
L L+ +K NL + E+F I+H+ DSL + + S + ID+GSG G PG+
Sbjct: 30 LVLEKNKLFNLTAIEDEEEFVIKHIADSLSLLKFLEEESSSQNPVAIDIGSGFGAPGLFV 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCDVI 145
I + SI V L +S KK +F+ + G C E D +
Sbjct: 90 KIAMPSIN---VWLNDSNKKKCNFMIEAKESLGISGVNVVCERAEVLGRKEDFREKFDFV 146
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+ L+ L EY+ P L
Sbjct: 147 FARAVDRLNVLCEYALPLL 165
>gi|257429505|ref|ZP_05605892.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
gi|257279986|gb|EEV10573.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
Length = 239
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 18/160 (11%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + D +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
SI D+G+G GFP I I ++ V +++S NK FL Y+ + + F
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKCIQFLNYLASELQLQDVSF-- 123
Query: 131 RIQEAPQMI------TTCDVISARALADLDTLLEYSFPWL 164
I + + + DV++ARA+A L L E P +
Sbjct: 124 -IHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLV 162
>gi|254670411|emb|CBA05972.1| glucose inhibited division protein B [Neisseria meningitidis
alpha153]
Length = 207
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S ++L + L KW+K NL + E + H+ DSL + +D+G
Sbjct: 17 DISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVFACRIQEAPQM 138
SGGG PGI ++ ++ + L+++ KK +FL+ V++ +V + R++ +
Sbjct: 77 SGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVVSGRVEAVSDV 133
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DV+++RA A+L + ++ L
Sbjct: 134 --RADVVTSRAFAELADFVSWTVHLL 157
>gi|228924227|ref|ZP_04087498.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835445|gb|EEM80815.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 239
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ V +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARA+A L L E P +
Sbjct: 134 KEGVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|283797200|ref|ZP_06346353.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
gi|291075161|gb|EFE12525.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
Length = 242
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWI 76
++ + +E+ +Y L +W++ +NL + + + + +H DSL V L
Sbjct: 20 LTEKQMEQFFRYYELLNEWNQVMNLTAITEMSEVVTKHFVDSLALKRAVDGLETEAFSVA 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFAC 130
D+G+G GFPGI I + V L++S NK+ FL V+ + TA G+
Sbjct: 80 DVGTGAGFPGIPLKIAFPGLR---VTLLDSLNKRVKFLNTVISELGLEGITAVHGRAEDF 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ T D+ +RA+A+L TL EY P +
Sbjct: 137 GRNRVSR--ETFDICVSRAVANLSTLSEYCMPLV 168
>gi|229550734|ref|ZP_04439459.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|307286501|ref|ZP_07566600.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|229304167|gb|EEN70163.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|306502374|gb|EFM71651.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|315165660|gb|EFU09677.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1302]
Length = 291
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 69 ELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 128
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 129 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 185
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 186 QKAEFRGAFDYVTARAVARLNVLSELCLPLV 216
>gi|30023506|ref|NP_835137.1| glucose-inhibited division protein B [Bacillus cereus ATCC 14579]
gi|75761488|ref|ZP_00741452.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218232716|ref|YP_002370257.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218900623|ref|YP_002449034.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228905426|ref|ZP_04069381.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|228942631|ref|ZP_04105163.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228955732|ref|ZP_04117727.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228961746|ref|ZP_04123349.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228968634|ref|ZP_04129617.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228975561|ref|ZP_04136113.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982197|ref|ZP_04142486.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|229020707|ref|ZP_04177434.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|229026923|ref|ZP_04183246.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|229051151|ref|ZP_04194695.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|229072947|ref|ZP_04206143.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|229099909|ref|ZP_04230832.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|229112895|ref|ZP_04242426.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|229118972|ref|ZP_04248317.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|229130728|ref|ZP_04259681.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|229148032|ref|ZP_04276371.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|229181728|ref|ZP_04309051.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|296505910|ref|YP_003667610.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|38257406|sp|Q814F8|RSMG_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725350|sp|B7IST2|RSMG_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725351|sp|B7H7A0|RSMG_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29899067|gb|AAP12338.1| Glucose inhibited division protein B [Bacillus cereus ATCC 14579]
gi|74491027|gb|EAO54279.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218160673|gb|ACK60665.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218542469|gb|ACK94863.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228601761|gb|EEK59259.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|228635457|gb|EEK91948.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|228652745|gb|EEL08630.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|228664497|gb|EEL19993.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|228670574|gb|EEL25887.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|228683524|gb|EEL37479.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|228710193|gb|EEL62171.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|228722214|gb|EEL73615.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|228734381|gb|EEL85052.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|228740602|gb|EEL90873.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|228777549|gb|EEM25827.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|228784171|gb|EEM32198.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791063|gb|EEM38681.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228797940|gb|EEM44950.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228803960|gb|EEM50584.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228817057|gb|EEM63150.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228854246|gb|EEM98949.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|296326962|gb|ADH09890.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|326943280|gb|AEA19176.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 239
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ V +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARA+A L L E P +
Sbjct: 134 KEGVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|261378090|ref|ZP_05982663.1| 16S rRNA methyltransferase GidB [Neisseria cinerea ATCC 14685]
gi|269145540|gb|EEZ71958.1| 16S rRNA methyltransferase GidB [Neisseria cinerea ATCC 14685]
Length = 207
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S ++L + L KW+K NL + E + H+ DSL + +D+G
Sbjct: 17 DISTAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVFACRIQEAPQM 138
SGGG PGI ++ ++ + L+++ KK +FL+ V++ +V + R++ +
Sbjct: 77 SGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVVSGRVEAVSDV 133
Query: 139 ITTCDVISARALADL 153
DVI++RA A+L
Sbjct: 134 --RADVITSRAFAEL 146
>gi|188994960|ref|YP_001929212.1| 16S rRNA methyltransferase GidB [Porphyromonas gingivalis ATCC
33277]
gi|188594640|dbj|BAG33615.1| glucose-inhibited division protein B [Porphyromonas gingivalis ATCC
33277]
Length = 224
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
++S E+ E L+ W+ IN++S +++ ++ HV SL R+ P S+ +
Sbjct: 27 HLSERQREQFEQMGGLYTHWNALINVISRKDIDNLYLHHVLHSLGIARMLNFKPGTSV-L 85
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLG+GGGFPGI +I + LV+ I K K AS + + R CR A
Sbjct: 86 DLGTGGGFPGIPLAILFPQVSFLLVDSIGKKVKVASAVAEALGLDNVR--TMHCR---AE 140
Query: 137 QMITTCDVISARALADLDTL 156
+ D + +RA+ L L
Sbjct: 141 SIGEKFDFVVSRAVMKLSEL 160
>gi|229542322|ref|ZP_04431382.1| methyltransferase GidB [Bacillus coagulans 36D1]
gi|229326742|gb|EEN92417.1| methyltransferase GidB [Bacillus coagulans 36D1]
Length = 238
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDL 78
+S E ++ E +Y + W+ K+NL + + + +++H DSL F P D+
Sbjct: 17 LSEEQKQQFETYYKWLVDWNNKMNLTAITEKGEVYLKHFYDSLTAAFFTDFNGPLHVCDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFAC 130
G+G GFPGI I + +++++S K+ +FL ++ + R + FA
Sbjct: 77 GAGAGFPGIPLKICFPELR---LSIVDSLQKRITFLGHLTEALGLKEVSLFHDRAETFAK 133
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P+ DV+ ARA+A + L E P
Sbjct: 134 K----PEHREQYDVVMARAVARMSVLSELCLP 161
>gi|293384807|ref|ZP_06630652.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|293388229|ref|ZP_06632748.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|312908849|ref|ZP_07767788.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|312979508|ref|ZP_07791190.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
gi|291077889|gb|EFE15253.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|291082376|gb|EFE19339.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|310625287|gb|EFQ08570.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|311287690|gb|EFQ66246.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
Length = 291
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 69 ELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 128
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 129 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 185
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 186 QKAEFRGAFDYVTARAVARLNVLSELCLPLV 216
>gi|327458814|gb|EGF05162.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1057]
Length = 237
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|315143570|gb|EFT87586.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2141]
Length = 291
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 17/155 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 69 ELTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 128
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFA 129
+G+G GFP I I S+ V +++S NK+ +FL +V + R + F
Sbjct: 129 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLVNVSLYHDRAETFG 185
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 186 ----QKAEFRGAFDYVTARAVARLNVLSELCLPLV 216
>gi|308175807|ref|YP_003922512.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|307608671|emb|CBI45042.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|328555783|gb|AEB26275.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens TA208]
gi|328914172|gb|AEB65768.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens LL3]
Length = 239
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S LE+ E +Y + ++W++K+NL S + ++ +++H DS+ + + D
Sbjct: 16 SLSDRQLEQFELYYQMLVEWNEKMNLTSITEKKEVYLKHFYDSITAAFYIDFEKVTTLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I + V +++S NK+ +FL + F A
Sbjct: 76 VGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLENLADALQLEHTTFVHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + D+++ARA+A L L E P +
Sbjct: 133 QRKDVRESFDLVTARAVARLSVLSELCLPLV 163
>gi|86141319|ref|ZP_01059865.1| glucose-inhibited division protein B [Leeuwenhoekiella blandensis
MED217]
gi|85831878|gb|EAQ50333.1| glucose-inhibited division protein B [Leeuwenhoekiella blandensis
MED217]
Length = 209
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S L + E L+ W+ KIN+VS +++ ++RHV SL + ++ + + +D
Sbjct: 10 DLSDTQLNQFEKLNDLYQDWNLKINVVSRKDIDEIYLRHVLHSLGIAKVQKFNRGASILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI--QEA 135
+G+GGGFPGI +I + LV+ I K K VV++ +A + +I
Sbjct: 70 VGTGGGFPGIPLAILFPETQFHLVDSIGKKIK-------VVEEVSAGLGLSNVKITNDRV 122
Query: 136 PQMITTCDVISARALADLDTLLEY 159
+ D I +RA+A ++T + +
Sbjct: 123 ENIDGQYDFIVSRAVAQMETFVRW 146
>gi|307284003|ref|ZP_07564173.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
gi|306503374|gb|EFM72623.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
Length = 291
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 69 ELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 128
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 129 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 185
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 186 QKAEFRGAFDYVTARAVARLNVLSELCLPLV 216
>gi|227518144|ref|ZP_03948193.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227555650|ref|ZP_03985697.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229547164|ref|ZP_04435889.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294781216|ref|ZP_06746563.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|307268879|ref|ZP_07550244.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|307273954|ref|ZP_07555164.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|307277345|ref|ZP_07558443.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|307289974|ref|ZP_07569900.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|312901334|ref|ZP_07760615.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|312952967|ref|ZP_07771823.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|227074412|gb|EEI12375.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227175227|gb|EEI56199.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229307746|gb|EEN73733.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294451679|gb|EFG20134.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|306498968|gb|EFM68460.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|306505979|gb|EFM75151.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|306509262|gb|EFM78322.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|306514795|gb|EFM83345.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|310629108|gb|EFQ12391.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|311291567|gb|EFQ70123.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|315030098|gb|EFT42030.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4000]
gi|315033591|gb|EFT45523.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0017]
gi|315036256|gb|EFT48188.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0027]
gi|315148291|gb|EFT92307.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4244]
gi|315151256|gb|EFT95272.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0012]
gi|315153741|gb|EFT97757.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0031]
gi|315155033|gb|EFT99049.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0043]
gi|315158678|gb|EFU02695.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0312]
gi|315172084|gb|EFU16101.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1342]
gi|315576179|gb|EFU88370.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309B]
gi|315582990|gb|EFU95181.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309A]
gi|327536398|gb|AEA95232.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis OG1RF]
Length = 291
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 69 ELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 128
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 129 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 185
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 186 QKAEFRGAFDYVTARAVARLNVLSELCLPLV 216
>gi|315168466|gb|EFU12483.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1341]
Length = 291
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 69 ELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 128
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 129 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 185
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 186 QKAEFRGAFDYVTARAVARLNVLSELCLPLV 216
>gi|163859297|ref|YP_001633595.1| glucose inhibited division protein B [Bordetella petrii DSM 12804]
gi|163263025|emb|CAP45328.1| glucose inhibited division protein B [Bordetella petrii]
Length = 295
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D N LR V +KL + +W++ NL + E ++H+ DSL
Sbjct: 77 ADPNGRLRQACDSLGLRVEAAQADKLLAYLAQMQRWNRTYNLTAIRDPEQMLVQHLFDSL 136
Query: 64 -------RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RV +++ D+GSGGG PG++ +I + + G V+ +E KK +F+R
Sbjct: 137 SVVDPLSRVVGADTAATVY-DIGSGGGLPGVVLAIMRPTWQIGCVDAVE---KKMAFVRQ 192
Query: 117 VVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
+ A + R++E P CDV+ +RA A L+
Sbjct: 193 MSGVLALPNLRALHARVEELPP--AGCDVVISRAFASLN 229
>gi|332672288|ref|YP_004455296.1| methyltransferase GidB [Cellulomonas fimi ATCC 484]
gi|332341326|gb|AEE47909.1| methyltransferase GidB [Cellulomonas fimi ATCC 484]
Length = 223
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F+ + LV V W RH+ +S P +DLGSG G PG++ +
Sbjct: 34 FHAMLTDEGVLRGLVGPREVSRLWARHLLNSAAAVPFLPETGRIVDLGSGAGLPGVVIAA 93
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
S E V L+E ++ +LR V + + V E D ++ARA+A
Sbjct: 94 MRPSCE---VVLLEPMERRTDWLREVADRLSLDNVVVERARAEEVHGRLVADAVTARAVA 150
Query: 152 DLDTLLEYSFPWL 164
LD L + P L
Sbjct: 151 ALDKLYRLALPLL 163
>gi|317509422|ref|ZP_07967040.1| glucose inhibited division protein [Segniliparus rugosus ATCC
BAA-974]
gi|316252251|gb|EFV11703.1| glucose inhibited division protein [Segniliparus rugosus ATCC
BAA-974]
Length = 225
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 22 SRETLEKL----EYFYFLFLKWSKKIN----LVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
S+E LE L + + +W + L+ E W RH+ +S V +L P +
Sbjct: 6 SQEMLEALFGDRAHLAIAYAEWLADVGVAAGLIGPREAERLWERHILNSAAVVELIPEGA 65
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
DLGSG G PGI +I + + L+E ++ ++ ++ V R +
Sbjct: 66 QAADLGSGAGLPGIPIAIARPDVR---MTLVEPLARRVDPVQKFLEDVGLDVGVLRARAE 122
Query: 134 --EAPQMITTCDVISARALADLDTLLEYS 160
EA +++ V+ +RA+A LDTL +S
Sbjct: 123 SSEARELLAPVPVVVSRAVAALDTLARWS 151
>gi|290579746|ref|YP_003484138.1| putative glucose-inhibited division protein [Streptococcus mutans
NN2025]
gi|254996645|dbj|BAH87246.1| putative glucose-inhibited division protein [Streptococcus mutans
NN2025]
Length = 237
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---IWI 76
N+S + E+ + ++ L ++W+ KINL + + ++ +++H DS+ P+ +
Sbjct: 16 NLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIAPLLSGYIPNESLKLL 75
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEA 135
D+G+G GFP + I ++ V +I+S NK+ FL + + + R ++
Sbjct: 76 DIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRIKFLNLLADALELDKVHFYHGRAEDF 132
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWL 164
Q D+++ARA+A L L E + P+L
Sbjct: 133 GQDKNFRAHFDLVTARAVARLQVLSELTIPFL 164
>gi|224475499|ref|YP_002633105.1| 16S rRNA methyltransferase GidB [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254766902|sp|B9DI97|RSMG_STACT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222420106|emb|CAL26920.1| glucose inhibited division protein B [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 240
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI-DLGSGGGF 84
++ + +Y L ++W++K+NL S + E +++H DS+ F + + I D+G+G GF
Sbjct: 23 QQFQTYYELLVEWNEKMNLTSITDEEGVYLKHFYDSITAAFYIDMNQELSICDVGAGAGF 82
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM----I 139
P I I ++ V +++S NK+ FL ++ RG V R + +
Sbjct: 83 PSIPLKIVFPQLK---VTIVDSLNKRIQFLNHLADALDLRGVSVVHERAENFGNVRGDNR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A L L E P +
Sbjct: 140 ESYDIVTARAVARLSVLSELCLPLV 164
>gi|302531352|ref|ZP_07283694.1| 16S rRNA methyltransferase GidB [Streptomyces sp. AA4]
gi|302440247|gb|EFL12063.1| 16S rRNA methyltransferase GidB [Streptomyces sp. AA4]
Length = 229
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +E+ + L + L+ VE W RHV +S + + P + +D+GSG G
Sbjct: 23 ERVEQAAGYVELLATHGVERGLIGPREVERLWERHVLNSAVIGEQIPSEARVVDVGSGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-----TAARGKVFACRIQEAPQM 138
PG+ +I ++ + L+E ++ +L V +K T RG+ ++E
Sbjct: 83 LPGVPLAIARPDLD---IVLLEPMARRVDWLAEVAEKLELPITIVRGRAEERSVRE---Q 136
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV++ARA+A L L + P + +
Sbjct: 137 LGGADVVTARAVAPLARLAGWCLPLVRPE 165
>gi|228911322|ref|ZP_04075126.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
gi|228848340|gb|EEM93190.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
Length = 239
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ V +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARA+A L L E P +
Sbjct: 134 KEGVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|39998552|ref|NP_954503.1| glucose-inhibited division protein B [Geobacter sulfurreducens PCA]
gi|55976460|sp|Q746Q5|RSMG_GEOSL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39985499|gb|AAR36853.1| glucose-inhibited division protein B [Geobacter sulfurreducens PCA]
gi|298507494|gb|ADI86217.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter
sulfurreducens KN400]
Length = 217
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+S E + F KW++KINL + + E+ ++H DSL + +L +DLG
Sbjct: 19 EISDELVTLFSLFADELKKWNRKINLTAITGDEEIALKHFVDSLALCRLVSGDDELLDLG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA---- 135
SGGGFP + ++ ++ V+ +E K + Q+ AAR + CR EA
Sbjct: 79 SGGGFPVLPLALVFPTMTAVSVDAVEKK--------IIFQRHAAR--LLGCRRFEAIHAR 128
Query: 136 ----PQMIT-TCDVISARALADLDTLLEYSFPWLYQK 167
P+M+ + I +RA +D+ + + P L +
Sbjct: 129 GEDLPRMLERRFNRIVSRAFSDIPSFARMALPLLMPQ 165
>gi|169633362|ref|YP_001707098.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii SDF]
gi|238688142|sp|B0VMY0|RSMG_ACIBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169152154|emb|CAP01056.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter baumannii]
Length = 210
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + + P + +D+G
Sbjct: 18 SLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPAGRL-LDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI--QEAP 136
+GGG PG+I I L E V L++S KK FL+ + + + R+ Q+
Sbjct: 77 TGGGMPGMI--IALCQPERSCV-LLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENQDTI 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DVI++RA A L + + P+L+++
Sbjct: 134 DELGQFDVITSRAFASLTDFVGAARPYLHEQ 164
>gi|229159042|ref|ZP_04287098.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
gi|228624461|gb|EEK81232.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
Length = 239
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 21/156 (13%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ E ++ ++W++K+NL + + ++ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFEIYFETLVEWNEKMNLTAITEKKEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFAC 130
G+G GFP I I ++ V +++S K+ +FL ++ QK R + F
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 131 R--IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ ++EA D++ ARA+A L L E P +
Sbjct: 134 KEGVREA------YDIVMARAVARLSVLSELCLPLV 163
>gi|225010940|ref|ZP_03701407.1| methyltransferase GidB [Flavobacteria bacterium MS024-3C]
gi|225004987|gb|EEG42942.1| methyltransferase GidB [Flavobacteria bacterium MS024-3C]
Length = 211
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLH 69
NY N + ++ LE L+ W+ KIN+VS +E+ ++RHV SL + +
Sbjct: 8 NYFPNLTHQQQDQFIALEA---LYQDWNLKINVVSRKDIEELYLRHVLHSLAIAKFISFN 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
P + +D+G+GGGFPGI +I + LV+ I KK ++ VV +
Sbjct: 65 PGAQV-LDVGTGGGFPGIPLAILFPETQFTLVDAI---GKKIKVVQEVVDGLGIENVRAI 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEY 159
R++E D + +RA+A + T + +
Sbjct: 121 HQRVEEDN---NQYDFVVSRAVAAMPTFMRW 148
>gi|313887693|ref|ZP_07821375.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846302|gb|EFR33681.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 230
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--I 76
Y++ + ++K E + L L +++ NL + ++F ++H D L + + + I
Sbjct: 9 YDLDTKNIDKYERYKKLILDYNQHTNLTRITEDDEFNVKHFLDCLSLLKTGKFNGCEKII 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE- 134
D+G+G GFPGI + ++ V L++S K+ FL V++ + R +E
Sbjct: 69 DIGTGAGFPGIPLKLYNERLD---VTLLDSLRKRIDFLDGVIEDLGLENIRAIHARAEEI 125
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+ +RA+A+L TL EY+ ++
Sbjct: 126 ARTDEYREQFDLAVSRAVANLSTLTEYAMGFV 157
>gi|256854949|ref|ZP_05560310.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
gi|256709462|gb|EEU24509.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
Length = 238
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D+
Sbjct: 17 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ---E 134
G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R + +
Sbjct: 77 GAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQ 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A L+ L E P +
Sbjct: 134 KAEFRGAFDYVTARAVARLNVLSELCLPLV 163
>gi|222152196|ref|YP_002561356.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
gi|254766896|sp|B9E8Z2|RSMG_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222121325|dbj|BAH18660.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
Length = 238
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIW 75
+ ++ E ++ +Y ++W++KINL + + E+ +++H DS+ F + SI
Sbjct: 15 FELTDEQQKQFAIYYETLVEWNEKINLTAVTEKEEVYLKHFFDSITPSFYFDFNKVKSIC 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+G+G GFP I I +E + +++S NK+ +FL ++ + F E
Sbjct: 75 -DVGAGAGFPSIPLKILYPHLE---ITIVDSLNKRINFLNHLSAELNLTNCHFVHDRAET 130
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWL 164
+ + DV++ARA+A L L E P +
Sbjct: 131 FGKGEYRESFDVVTARAVARLSVLSELCLPLV 162
>gi|51894468|ref|YP_077159.1| glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
gi|81610303|sp|Q67J35|RSMG_SYMTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51858157|dbj|BAD42315.1| Glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
Length = 246
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 16/140 (11%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L +W++++NL + + ++ I+H D+ L V + P + ID+G+G GFPG++
Sbjct: 35 LVREWNERMNLTAITDPQEMVIKHALDAASGLAVAGVEPGQRV-IDVGTGAGFPGVVWKC 93
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTA---ARGKVF------ACRIQEAPQMITTC 142
I+ + L+ES K+ FL V Q A G+ + A + P
Sbjct: 94 LRPGID---LTLLESLQKRCRFLEEVGQAVIGPLAGGEGYQVVWGRAEDVGRNPAHRERY 150
Query: 143 DVISARALADLDTLLEYSFP 162
D+++ARA+A+L L EY P
Sbjct: 151 DLVTARAVAELRVLAEYCLP 170
>gi|29377741|ref|NP_816895.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis V583]
gi|255971517|ref|ZP_05422103.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255974467|ref|ZP_05425053.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256761822|ref|ZP_05502402.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256957048|ref|ZP_05561219.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256960912|ref|ZP_05565083.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256963950|ref|ZP_05568121.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|257078725|ref|ZP_05573086.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|257083973|ref|ZP_05578334.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257417390|ref|ZP_05594384.1| glucose inhibited division protein [Enterococcus faecalis AR01/DG]
gi|257418873|ref|ZP_05595867.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257421312|ref|ZP_05598302.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|38257437|sp|Q82YY1|RSMG_ENTFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29345209|gb|AAO82965.1| glucose-inhibited division protein B [Enterococcus faecalis V583]
gi|255962535|gb|EET95011.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255967339|gb|EET97961.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256683073|gb|EEU22768.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256947544|gb|EEU64176.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256951408|gb|EEU68040.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256954446|gb|EEU71078.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|256986755|gb|EEU74057.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|256992003|gb|EEU79305.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257159218|gb|EEU89178.1| glucose inhibited division protein [Enterococcus faecalis ARO1/DG]
gi|257160701|gb|EEU90661.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257163136|gb|EEU93096.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|323479207|gb|ADX78646.1| methyltransferase GidB [Enterococcus faecalis 62]
Length = 238
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D+
Sbjct: 17 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ---E 134
G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R + +
Sbjct: 77 GAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQ 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A L+ L E P +
Sbjct: 134 KAEFRGAFDYVTARAVARLNVLSELCLPLV 163
>gi|311032248|ref|ZP_07710338.1| 16S rRNA methyltransferase GidB [Bacillus sp. m3-13]
Length = 238
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
++S + L + + +Y L ++W++K+NL + + E+ +++H DS+ L+ S+
Sbjct: 16 SLSSQQLSQFDTYYKLLVEWNEKMNLTAITDEEEVYLKHFYDSITASFYVDLNQELSLC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA- 135
D+G+G GFP I I +++ V +++S NK+ +FL+ + + + F E
Sbjct: 75 DVGAGAGFPSIPLKICFPNLK---VTIVDSLNKRITFLQNLANELGLKNVHFVHDRAETF 131
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D+++ARA+A L L E P + +
Sbjct: 132 GKNADYREKFDLVTARAVARLSVLSELCLPLVKE 165
>gi|257088448|ref|ZP_05582809.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
gi|256997260|gb|EEU83780.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
Length = 238
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D+
Sbjct: 17 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ---E 134
G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R + +
Sbjct: 77 GAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQ 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A L+ L E P +
Sbjct: 134 KAEFRGAFDYVTARAVARLNVLSELCLPLV 163
>gi|192360168|ref|YP_001984270.1| methyltransferase GidB [Cellvibrio japonicus Ueda107]
gi|238692447|sp|B3PIT7|RSMG_CELJU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190686333|gb|ACE84011.1| methyltransferase GidB [Cellvibrio japonicus Ueda107]
Length = 219
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 4 CDSNSILRANYL-----LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
D NS+LR L + R+T E+L + F KW+K NL + V RH
Sbjct: 2 SDVNSVLRKQLLNGAAQMGVAPGERQT-EQLLAYIREFEKWNKAYNLSAVRDVTQMVARH 60
Query: 59 VEDSLRV---FQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+ DSL V PYP + ID+G+GGG PGI +I L++S KK FL
Sbjct: 61 LLDSLSVVPWIARSPYPLARMIDVGTGGGLPGIPLAIMFPE---KTFTLLDSNGKKTRFL 117
Query: 115 RYV 117
+V
Sbjct: 118 FHV 120
>gi|78184194|ref|YP_376629.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CC9902]
gi|123581932|sp|Q3AZ92|RSMG_SYNS9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78168488|gb|ABB25585.1| Glucose inhibited division protein [Synechococcus sp. CC9902]
Length = 243
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSI 74
+ S E +++L L +W++K+NL +D+WI V DSL + P
Sbjct: 16 WQPSTEQVDQLATLQTLLREWNEKVNLTRLVEGDDYWINQVFDSLWPLAHELKTPHQPRT 75
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
ID+G+GGGFPG+ +I L G + L++S +K + + + +
Sbjct: 76 CIDVGTGGGFPGLAIAIALP---GSHMTLLDSVGRKTAAVEAMASR 118
>gi|313893548|ref|ZP_07827118.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
gi|313441991|gb|EFR60413.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
Length = 250
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 78/144 (54%), Gaps = 16/144 (11%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGGGFPGII 88
+Y ++ +K +NL + +++ ++H+ DSL + + P SI ID+G+G GFPGI
Sbjct: 41 YYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSNIIKPGMSI-IDVGTGAGFPGIP 99
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I S++ V L +S K+ +FL V+ + T G+ Q+ + +
Sbjct: 100 LAIYDRSLK---VTLFDSLKKRLTFLESVMDELNLTNCTTLHGRAEDLSHQDYRE---SF 153
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D+ ++RA+A L LLE++ P++ +
Sbjct: 154 DIATSRAVARLPILLEWTVPYVKE 177
>gi|315174217|gb|EFU18234.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1346]
Length = 300
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 78 ELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 137
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 138 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 194
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 195 QKAEFRGAFDYVTARAVARLNVLSELCLPLV 225
>gi|227485739|ref|ZP_03916055.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
gi|227236294|gb|EEI86309.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
Length = 209
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
L+ + NL + + + ++H +DSL V +DLG+G GFPGI I+
Sbjct: 11 LLEVNSHTNLTTITDPAEIDLKHFKDSLTVLDYIKEGDKVLDLGAGAGFPGIPLRIEKDF 70
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE-APQMITTCDVISARALADL 153
+ LI+S NKK +F+ V++K + R ++ A DV+ +RA+A++
Sbjct: 71 D----LTLIDSVNKKVNFMNEVIEKLGLTNARAIHTRAEDFAKDHREGFDVVVSRAVANM 126
Query: 154 DTLLEYSFPWL 164
TL E P +
Sbjct: 127 ATLSELCLPLV 137
>gi|312902981|ref|ZP_07762170.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|310633649|gb|EFQ16932.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|315163401|gb|EFU07418.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0645]
Length = 300
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWID 77
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D
Sbjct: 78 ELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICD 137
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--- 133
+G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R +
Sbjct: 138 VGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFG 194
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 195 QKAEFRGAFDYVTARAVARLNVLSELCLPLV 225
>gi|257081315|ref|ZP_05575676.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
gi|256989345|gb|EEU76647.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
Length = 238
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDL 78
++ + + + + ++ L ++W++K+NL + + ++ +++H D SL F+ D+
Sbjct: 17 LTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ---E 134
G+G GFP I I S+ V +++S NK+ +FL +V + A ++ R + +
Sbjct: 77 GAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETFGQ 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFP 162
+ D ++ARA+A L+ L E P
Sbjct: 134 KAEFRGAFDYVTARAVARLNVLSELCLP 161
>gi|240145750|ref|ZP_04744351.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|257202166|gb|EEV00451.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|291539799|emb|CBL12910.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis XB6B4]
Length = 242
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGII 88
+Y L ++ +K +NL + + ++ +H DSL RV+ L I +DLG+G GFPGI
Sbjct: 34 YYELLVETNKVMNLTAITEFDEVVEKHFLDSLSLCRVYDLKIDAKI-LDLGTGAGFPGIP 92
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
I ++E + L +S NK+ FL V+ + TA + A +
Sbjct: 93 LKIAFPNLE---LVLADSLNKRIKFLNQVIDELELKDITAVHAR--AEELGRNKDYREQF 147
Query: 143 DVISARALADLDTLLEYSFPWL 164
DV +RA+A+L +L EY P++
Sbjct: 148 DVCVSRAVANLSSLSEYCIPFV 169
>gi|291536996|emb|CBL10108.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis M50/1]
Length = 238
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGII 88
+Y L ++ +K +NL + + ++ +H DSL RV+ L I +DLG+G GFPGI
Sbjct: 30 YYELLVETNKVMNLTAITEFDEVVEKHFLDSLSLCRVYDLKIDAKI-LDLGTGAGFPGIP 88
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
I ++E + L +S NK+ FL V+ + TA + A +
Sbjct: 89 LKIAFPNLE---LVLADSLNKRIKFLNQVIDELELKDITAVHAR--AEELGRNKDYREQF 143
Query: 143 DVISARALADLDTLLEYSFPWL 164
DV +RA+A+L +L EY P++
Sbjct: 144 DVCVSRAVANLSSLSEYCIPFV 165
>gi|125717463|ref|YP_001034596.1| 16S rRNA methyltransferase GidB [Streptococcus sanguinis SK36]
gi|166224624|sp|A3CLJ1|RSMG_STRSV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125497380|gb|ABN44046.1| Methyltransferase gidB, putative [Streptococcus sanguinis SK36]
Length = 237
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQILSELTIPYL 164
>gi|324990717|gb|EGC22653.1| glucose inhibited division protein B [Streptococcus sanguinis
SK353]
Length = 237
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIGNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|332885399|gb|EGK05648.1| ribosomal RNA small subunit methyltransferase G [Dysgonomonas
mossii DSM 22836]
Length = 206
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
N++ + ++ Y L+ W+ KIN++S +E+ + HV SL + +L + S +D
Sbjct: 10 NITEKQKQQFAALYDLYADWNSKINVISRKDIENLYTHHVLHSLGIAKLIQFKDGSKIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQ 133
+G+GGGFPG+ +I LV+ I K +R + ++A G + CR +
Sbjct: 70 VGTGGGFPGVPLAILFPKCNFLLVDSIGKK------VRVATEVSSAIGLENIQFRHCRAE 123
Query: 134 EAPQMITTCDVISARALADLDTLLE 158
E + D + +RA+ L L++
Sbjct: 124 EVKEQF---DFVVSRAVMPLPDLVK 145
>gi|296840695|ref|ZP_06863230.2| 16S rRNA methyltransferase GidB [Neisseria polysaccharea ATCC
43768]
gi|296840209|gb|EFH24147.1| 16S rRNA methyltransferase GidB [Neisseria polysaccharea ATCC
43768]
Length = 238
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++S ++L + L KW+K NL + E + H+ DSL +
Sbjct: 38 LRTGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMVVHHLLDSLTLLPHI 97
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
+D+GSGGG PGI ++ ++ + L+++ KK +FL+ V++ +V
Sbjct: 98 EGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLDNVRVV 154
Query: 129 ACRIQEAPQMITTCDVISARALADL 153
+ R++ + DV+++RA A+L
Sbjct: 155 SGRVEAVSDV--RADVVTSRAFAEL 177
>gi|293399789|ref|ZP_06643935.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306189|gb|EFE47432.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 236
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 14 YLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHP 70
+++ +Y ++ + L++ + + L+W++K+NL + + +++ + +H DS L F +
Sbjct: 12 HVVKSYGITLQDTQLQQFAMYAAMLLEWNQKMNLTAITDMDEIYEKHFLDSILPSFDVK- 70
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTA 122
+ D+G+G GFP I I +E + ++E+ K+ +FL + V
Sbjct: 71 LKGTFCDVGAGAGFPSIPLKIVYPDLE---ITIVETLGKRITFLEALCHQLKLNNVHCVH 127
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
AR + +A +E + D++SARA+A+L L E P +
Sbjct: 128 ARAEDYAKEHRE------SFDIVSARAVANLTMLSELCIPLV 163
>gi|302800848|ref|XP_002982181.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
gi|300150197|gb|EFJ16849.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
Length = 225
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIW----IDLGSGGGFPGII 88
L W++++NL S + ++ RH+ DSL V + H S +D+GSG G PGII
Sbjct: 20 LLVWNQRMNLTSVTDRKEMMERHIRDSLSLLPVIEKHCSLSDGNLKVVDIGSGAGLPGII 79
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMITTCDV 144
I + + + LIES KK FL V + + V R +E + T DV
Sbjct: 80 FGIARPNWK---ITLIESIQKKCDFLEDAVLAVSLQNVSVVRARAEEKGRDAEFRETFDV 136
Query: 145 ISARALADLDTLLEYSFPWL 164
ARA+A++ L E P++
Sbjct: 137 AVARAVAEMRVLAELCLPFV 156
>gi|30250396|ref|NP_842466.1| glucose inhibited division protein [Nitrosomonas europaea ATCC
19718]
gi|38257430|sp|Q82S79|RSMG_NITEU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|30181191|emb|CAD86387.1| Glucose inhibited division protein [Nitrosomonas europaea ATCC
19718]
Length = 214
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L KW+ NL S E RH+ DSL + P I +D+GSG GFPGI
Sbjct: 27 RLLRYIELIAKWNSTHNLTSVRNPESMITRHMLDSLVILPHVSGPGI-VDVGSGAGFPGI 85
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITT 141
++ + V L+ES KKA+FL V + + +G+V +++
Sbjct: 86 PVALARPEWQ---VTLVESNQKKAAFLLQAVLELGLPNISVKQGRVEKIKLE------NK 136
Query: 142 CDVISARALADLDTLLEYS 160
D + +RA + L+ + S
Sbjct: 137 VDTVVSRAFSSLERFMSLS 155
>gi|331002967|ref|ZP_08326479.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
gi|330413011|gb|EGG92386.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
Length = 241
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIW 75
++S + EKL FY L ++ +K +NL S + +++ +H DS+ + + L
Sbjct: 18 DISDDKKEKLYRFYELLIEKNKVMNLTSITELKECTYKHFIDSISLIKIVKDLDSKDYNI 77
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
DLG+G GFPGI +I ++ + LI+S NK+ F++ V + R ++
Sbjct: 78 ADLGTGAGFPGIPLAIVFPNLN---LTLIDSLNKRIKFIQEVCENLGLENVNAIHSRAED 134
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWL 164
+ + D+ +RA+A+L +L EY P +
Sbjct: 135 IARNRDYRESFDICVSRAVANLASLSEYCLPLV 167
>gi|118582019|ref|YP_903269.1| methyltransferase GidB [Pelobacter propionicus DSM 2379]
gi|189045874|sp|A1AV41|RSMG_PELPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118504729|gb|ABL01212.1| 16S rRNA m(7)G-527 methyltransferase [Pelobacter propionicus DSM
2379]
Length = 221
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
+ +S E L + F KW+ ++NL + + + ++H+ DSL + + +D+
Sbjct: 19 FELSGEQLRDFQLFAMELKKWNLRVNLTAITDDGEIAVKHIADSLFLARQLDSTERVLDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-AP 136
GSG G P I I + +E V+ + KK F R+V + +G + RI+
Sbjct: 79 GSGAGIPAIPLKIAIPGLETVSVDAV---GKKIHFQRHVARLLRLQGFQALHARIESLHA 135
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI++RA +DL + + P L +
Sbjct: 136 THGRSFDVITSRAFSDLGLFVRLTAPLLAE 165
>gi|212550953|ref|YP_002309270.1| glucose inhibited division protein B [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549191|dbj|BAG83859.1| glucose inhibited division protein B [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 209
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 27 EKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGG 82
+K+++F L+ W++K NL+S + + + RHV SL + Q+ + S +D+G+GG
Sbjct: 18 QKVQFFALRDLYTNWNRKANLISRKDIGNLYERHVLHSLGIAQIISFCDYSTILDVGTGG 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GFPG+ +I ++ L++S KK L ++ K R C+ A
Sbjct: 78 GFPGVPLAILFPNVR---FLLLDSTAKKIKILENIISKLNLRN--VKCKCMRAEYERGQF 132
Query: 143 DVISARALADLDTLL 157
D I +RA L L+
Sbjct: 133 DFIISRAAMPLLELV 147
>gi|206970084|ref|ZP_03231037.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|229193733|ref|ZP_04320674.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
gi|206734661|gb|EDZ51830.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|228589758|gb|EEK47636.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
Length = 239
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ + +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---ITIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++ ARA+A L L E P +
Sbjct: 134 KEGVRESYDIVMARAVARLSVLSELCLPLV 163
>gi|116073720|ref|ZP_01470982.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9916]
gi|116069025|gb|EAU74777.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9916]
Length = 250
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSI 74
+ S E + E L+W+ ++NL EDFWI + DSL Q P
Sbjct: 20 WTPSAEQRHQFEALQQELLRWNARVNLTRLLEREDFWIAQILDSLWPLQDELRTPNAPRR 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
ID+G+GGGFPG+ +I ++ G + L++S +K +
Sbjct: 80 CIDVGTGGGFPGLAVAI---ALPGAQLTLVDSVGRKTA 114
>gi|295697830|ref|YP_003591068.1| methyltransferase GidB [Bacillus tusciae DSM 2912]
gi|295413432|gb|ADG07924.1| methyltransferase GidB [Bacillus tusciae DSM 2912]
Length = 245
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSG 81
E LE + ++ ++++NL + + E + +H DSL V L P +D+GSG
Sbjct: 27 EVWRGLEVYERRLVERNREVNLTAVTDAEGVYWKHFYDSLVVLGLPEVPQAGFLVDVGSG 86
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE---APQ 137
GFPG++ ++ V+L+++ K+ FL V + R +V R +E P
Sbjct: 87 AGFPGLVLAVARPGFS---VSLLDALRKRVWFLEEVRGELGLTRVRVVHGRAEEYGRRPG 143
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ D+ +ARA+A + L E P++
Sbjct: 144 WRESFDMATARAVAQMSVLAELLLPFV 170
>gi|269129162|ref|YP_003302532.1| methyltransferase GidB [Thermomonospora curvata DSM 43183]
gi|268314120|gb|ACZ00495.1| methyltransferase GidB [Thermomonospora curvata DSM 43183]
Length = 210
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 33 YFLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
Y FL + I L+ V+ W RH+ + V ++ P + IDLGSG G PG++ +I
Sbjct: 12 YAEFLADAGVIRGLIGPREVDRLWERHLINCAVVAEMVPQGATVIDLGSGAGLPGLVLAI 71
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARAL 150
+ V L+E ++ FL V+ +V R +E DV++ARA+
Sbjct: 72 ARPDLS---VTLLEPLLRRTKFLTEAVELLELENVEVHRARAEEV-AGDYQVDVVTARAV 127
Query: 151 ADLDTLLEYSFPWL 164
A LD L+ ++ P L
Sbjct: 128 APLDRLVGWALPLL 141
>gi|332830472|gb|EGK03100.1| ribosomal RNA small subunit methyltransferase G [Dysgonomonas gadei
ATCC BAA-286]
Length = 206
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
++S E + Y L++ W+ KIN++S +E+ + HV SL + +L + + +D
Sbjct: 10 DISEEQKSQFAALYDLYVDWNSKINVISRKDIENLYTHHVLHSLAIAKLIQFTDGTQLMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQ 133
+G+GGGFPG+ +I + LV+ I K +R + A G + CR +
Sbjct: 70 VGTGGGFPGVPLAILFPKCKFLLVDSIGKK------IRVATEVATAIGLKNIQFRHCRAE 123
Query: 134 EAPQMITTCDVISARALADLDTLLE 158
E + D + +RA+ L L++
Sbjct: 124 EVKEKF---DFVVSRAVMPLPDLVK 145
>gi|164686454|ref|ZP_02210482.1| hypothetical protein CLOBAR_00019 [Clostridium bartlettii DSM
16795]
gi|164604465|gb|EDQ97930.1| hypothetical protein CLOBAR_00019 [Clostridium bartlettii DSM
16795]
Length = 239
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
ILR S + L + + + ++W++K+NL ++ +I+H DS+
Sbjct: 5 DILRQGIEDFGIEASDKMLADFQKYKEILVEWNQKMNLTGIEDEKEVFIKHFLDSISAVS 64
Query: 68 LHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ ID+G+G GFPG+ I L ++ V L++S NK+ +FL+ V +
Sbjct: 65 KGYIKNGMSLIDVGTGAGFPGMPLRISLPDLK---VTLLDSLNKRINFLQEVANQIDIDD 121
Query: 126 KVFACRIQE---APQMITTC-DVISARALADLDTLLEYSFPWL 164
F E + C D+ +ARA+A L L+E+ P++
Sbjct: 122 IEFIHGRAEDFGKDENYRECFDIATARAVAGLPALMEFCVPFV 164
>gi|238018232|ref|ZP_04598658.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
gi|237864703|gb|EEP65993.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
Length = 250
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIIT 89
+Y ++ +K +NL + +++ ++H+ DSL + H S ID+G+G GFPGI
Sbjct: 41 YYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDPHIIKSGMSIIDVGTGAGFPGIPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCD 143
+I S++ V L +S K+ +FL ++ + T G+ Q+ + + D
Sbjct: 101 AIYDRSLK---VTLFDSLKKRLTFLESIMDELQLTNCTTLHGRAEDLSHQDYRE---SFD 154
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+ ++RA+A L LLE++ P++ +
Sbjct: 155 IATSRAVARLPILLEWTVPYVKE 177
>gi|221195056|ref|ZP_03568112.1| 16S rRNA methyltransferase GidB [Atopobium rimae ATCC 49626]
gi|221184959|gb|EEE17350.1| 16S rRNA methyltransferase GidB [Atopobium rimae ATCC 49626]
Length = 244
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 15 LLNTYNVSRETLEK---LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLH 69
LLN Y++S ++ L Y LF K +K +NL + ++ + H+ DSL + F L
Sbjct: 16 LLNIYDLSTTHEQRKFLLTYLELLFEK-NKTLNLTRITDIDSALVLHILDSLLLSKFMLC 74
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ D+G+GGG PG I L + G LI+S KK S + ++ + ++ A
Sbjct: 75 SEEDSFCDIGTGGGVPG----IPLGCVLGCKGLLIDSIGKKISAVNEFAEQLGIQDRIIA 130
Query: 130 --CRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R +E +M + + ARA+A + ++EY+ P+L +
Sbjct: 131 KQMRAEEIEAKMKRSFRFVVARAVAKANVVMEYAEPFLMDQ 171
>gi|223932622|ref|ZP_03624622.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|330832234|ref|YP_004401059.1| methyltransferase GidB [Streptococcus suis ST3]
gi|223898732|gb|EEF65093.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|329306457|gb|AEB80873.1| methyltransferase GidB [Streptococcus suis ST3]
Length = 237
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 10/140 (7%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLH--PYPSIWIDLGSGGGFPGII 88
++ L ++W++KINL + + + +++H DS+ + Q H P +D+G+G GFP +
Sbjct: 28 YFQLLVEWNEKINLTAITEESEVYLKHFYDSIAPILQGHIQNEPLRLLDIGAGAGFPSLP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCDV 144
I ++ V +I+S NK+ +FL + ++ G F A + D+
Sbjct: 88 MKIIFPQLD---VTIIDSLNKRINFLHLLAEELELEGVHFYHGRAEDFAQDKNFRAQFDL 144
Query: 145 ISARALADLDTLLEYSFPWL 164
++ARA+A + L E + P+L
Sbjct: 145 VTARAVARMQILSELTIPYL 164
>gi|206900779|ref|YP_002251265.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
gi|226797823|sp|B5YFF7|RSMG_DICT6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|206739882|gb|ACI18940.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
Length = 240
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 31 YFYFLFLK-WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGI 87
Y Y++ LK W++KINL S E+ ++H DSL +I ID+G+G GFPGI
Sbjct: 29 YLYYMALKEWNRKINLTSLEGEEEIILKHFVDSLSCIIPIRNENIERIIDIGTGAGFPGI 88
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCD 143
I + + L+ES+ KK FL +++ A + + P+ D
Sbjct: 89 PIKIYDEKYK---LTLLESQKKKILFLEELIKILELSDVEIVWDRAENLGKDPRYREQFD 145
Query: 144 VISARALADLDTLLEYSFPWL 164
+ AR +A + +LEY+ P++
Sbjct: 146 LALARGVAKPNIVLEYALPFV 166
>gi|123966888|ref|YP_001011969.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9515]
gi|123201254|gb|ABM72862.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9515]
Length = 220
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYP----SIWIDLGSGGGFPGIITSIQLSSIE 97
K NL +D+WI V DSL F+ + +ID+GSG GFPG +I + E
Sbjct: 16 KTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGCGFPGFAYAITHPNSE 75
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--RIQEAPQMIT---TCDVISARALAD 152
+ L++S KK L+ ++++ + +F RI+ + + + ++ +ARA+++
Sbjct: 76 ---IYLVDSSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFKKSFNIATARAVSN 132
Query: 153 LDTLLEYSFPWLYQ 166
T+ EY P L Q
Sbjct: 133 PSTVAEYILPMLEQ 146
>gi|189347674|ref|YP_001944203.1| 16S rRNA methyltransferase GidB [Chlorobium limicola DSM 245]
gi|238692197|sp|B3EGW1|RSMG_CHLL2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189341821|gb|ACD91224.1| methyltransferase GidB [Chlorobium limicola DSM 245]
Length = 220
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSS 95
+W+KKINL+S I+HV SL + HP+ + +DLG+GGG PGI +I
Sbjct: 39 QWNKKINLISRKEDAPVVIKHVFHSLLMGLFHPFSAGEKVLDLGTGGGLPGIPLAIAWPE 98
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVISARALADLD 154
L++S KK + + ++++ V R++E + T D + +R +A L+
Sbjct: 99 TR---FLLVDSTGKKIAACQAMIKELGISNAVALHSRVEELKGL--TFDTVLSRQVAQLE 153
Query: 155 TLLEYSFPWL 164
L Y++ +L
Sbjct: 154 QLCAYTYRFL 163
>gi|146299509|ref|YP_001194100.1| glucose-inhibited division protein B [Flavobacterium johnsoniae
UW101]
gi|189039389|sp|A5FJ42|RSMG_FLAJ1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146153927|gb|ABQ04781.1| methyltransferase GidB [Flavobacterium johnsoniae UW101]
Length = 209
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHP 70
Y N ++ E +KL+ FL+ W++KIN++S ++ + +H+ SL +V + P
Sbjct: 7 YFPNLTDLQIEQFQKLD---FLYHNWNEKINVISRKDIDSLYTKHILHSLGIAKVMKFEP 63
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++ +D+G+GGGFPGI +I L+++I KK ++ VV A K
Sbjct: 64 GTTV-LDVGTGGGFPGIPLAILFPETRFYLIDVIA---KKIKVVQGVVD--ALELKNVKA 117
Query: 131 RIQEAPQMITTCDVISARALADL 153
+ A + D I +RA+ ++
Sbjct: 118 EQKRAELVKGDFDFIVSRAVTNM 140
>gi|71733888|ref|YP_277290.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|123634470|sp|Q48BF5|RSMG_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71554441|gb|AAZ33652.1| methyltransferase GidB [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 211
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 20 DLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I G V L++S KK F
Sbjct: 77 VGSGGGMPGIPMAILFPE---GKVALLDSNGKKTRF 109
>gi|72163511|ref|YP_291168.1| 16S rRNA methyltransferase GidB [Thermobifida fusca YX]
gi|123628492|sp|Q47K77|RSMG_THEFY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71917243|gb|AAZ57145.1| Glucose inhibited division protein [Thermobifida fusca YX]
Length = 237
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
ETL + + L L+ V W RH+ + V +L P + IDLGSG G
Sbjct: 17 ETLPVAQRYAELLADVGVARGLIGPREVPRLWERHLMNCAVVEELIPKGADVIDLGSGAG 76
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG++ +I + V L+E ++ FL V+ +V+ R +E
Sbjct: 77 LPGVVLAILRPDLS---VTLLEPLLRRTVFLNECVELLRLDNVRVYRGRAEEV-HAKLRA 132
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D+++ARA+A L L+ ++ P L +
Sbjct: 133 DIVTARAVAPLPKLIGWALPLLRK 156
>gi|227494183|ref|ZP_03924499.1| glucose-inhibited division protein B [Actinomyces coleocanis DSM
15436]
gi|226831917|gb|EEH64300.1| glucose-inhibited division protein B [Actinomyces coleocanis DSM
15436]
Length = 223
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ +F + + + L+ + W RH+ +S + + P + +D+GSG GFPG++
Sbjct: 34 MSHFAQMLVDEGELRGLIGPRELPRLWSRHLVNSAAIVEFIPQRAQMLDVGSGAGFPGMV 93
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V+L+E ++ +L VV + + E DV+++R
Sbjct: 94 AAIMRPDVD---VHLVEPMLRRVEWLEDVVAELGLDNVTVHHKRAEELHGQGKADVVTSR 150
Query: 149 ALADLDTLLEYSFPWL 164
A+A+L L+ P +
Sbjct: 151 AVANLKKLMPICMPLV 166
>gi|108759077|ref|YP_635596.1| methyltransferase GidB [Myxococcus xanthus DK 1622]
gi|123073866|sp|Q1CVH7|RSMG_MYXXD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108462957|gb|ABF88142.1| methyltransferase GidB [Myxococcus xanthus DK 1622]
Length = 217
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V+ + +L+ LKW+ K+NL + + E+ +H DSL V + +DLG
Sbjct: 20 TVAADLGPRLQRLMSELLKWNAKVNLTAITAPEEVLEKHFLDSLAVLPEVTGAATLLDLG 79
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G GFPG+ + L ++ V L+++ KK +F++ +G + R + P+
Sbjct: 80 AGAGFPGLPLKLALPALG---VTLVDTVGKKVAFIKAAAASLGLQGVRGLHARAEGQPET 136
Query: 139 --ITTCDVISARALADL 153
I +V+ ARA DL
Sbjct: 137 EGIPRAEVLIARAFMDL 153
>gi|193806485|sp|A2BYK1|RSMG_PROM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 239
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYP----SIWIDLGSGGGFPGIITSIQLSSIE 97
K NL +D+WI V DSL F+ + +ID+GSG GFPG +I + E
Sbjct: 35 KTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGCGFPGFAYAITHPNSE 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--RIQEAPQMIT---TCDVISARALAD 152
+ L++S KK L+ ++++ + +F RI+ + + + ++ +ARA+++
Sbjct: 95 ---IYLVDSSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFKKSFNIATARAVSN 151
Query: 153 LDTLLEYSFPWLYQ 166
T+ EY P L Q
Sbjct: 152 PSTVAEYILPMLEQ 165
>gi|78049820|ref|YP_365995.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325927975|ref|ZP_08189196.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|325928705|ref|ZP_08189877.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|123583814|sp|Q3BML8|RSMG_XANC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78038250|emb|CAJ25995.1| methyltransferase GidB [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325540937|gb|EGD12507.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|325541660|gb|EGD13181.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
Length = 212
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 34 YLALLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIASGTLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALDEPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|310825566|ref|YP_003957924.1| ribosomal RNA small subunit methyltransferase g [Stigmatella
aurantiaca DW4/3-1]
gi|309398638|gb|ADO76097.1| Ribosomal RNA small subunit methyltransferase G [Stigmatella
aurantiaca DW4/3-1]
Length = 217
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ LKW+ K+NL + + E+ +H DSL V + +DLG+G GFPG+
Sbjct: 29 LQRLMAELLKWNAKVNLTAITAPEEVLEKHFLDSLAVLPEVEGAASLLDLGAGAGFPGLP 88
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA---ARGKVFACRIQEAPQMITTCDVI 145
+ ++ V L+++ KK FL+ + ARG + I +++
Sbjct: 89 LKLARPALA---VTLVDAVGKKVGFLKAAIAALGLKEARGLHLRAEGDPEREGIPRAELL 145
Query: 146 SARALADL 153
ARA DL
Sbjct: 146 IARAFMDL 153
>gi|126663166|ref|ZP_01734164.1| glucose-inhibited division protein/predicted methyltransferase
[Flavobacteria bacterium BAL38]
gi|126624824|gb|EAZ95514.1| glucose-inhibited division protein/predicted methyltransferase
[Flavobacteria bacterium BAL38]
Length = 209
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N+S + + + L+ W+ KIN++S +++ + RHV SL ++ + P I +
Sbjct: 10 NLSDNQILQFQKLQSLYEDWNAKINVISRKDIDELYTRHVLHSLGIAKIIEFRPGSKI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+GGGFPGI +I ++ L+++I K +R V + A G K + A
Sbjct: 69 DVGTGGGFPGIPLAILHPEVDFYLIDVIAKK------IRVVNEVAAGLGLKNVKAEQKRA 122
Query: 136 PQMITTCDVISARALADL 153
+ D I +RA+ ++
Sbjct: 123 ELVKQEFDFIVSRAVTNM 140
>gi|255320528|ref|ZP_05361709.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens SK82]
gi|262378420|ref|ZP_06071577.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens
SH164]
gi|255302500|gb|EET81736.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens SK82]
gi|262299705|gb|EEY87617.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens
SH164]
Length = 210
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+++ ETL L + + W+K NL + ++ ++H+ DSL + + P + +D+G
Sbjct: 18 SLNDETLGLLLQYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDLPSGRL-LDIG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI--QEAP 136
+GGG PG+I I L E V L++S KK FL+ + + + R+ +E+
Sbjct: 77 TGGGMPGMI--IALCQPERECV-LLDSNGKKIRFLKQFIADLKLKNVIAVQTRVENEESI 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLY 165
+ DVI++RA A L + S P+++
Sbjct: 134 HELGQFDVITSRAFASLTDFVLASEPYMH 162
>gi|224372585|ref|YP_002606957.1| 16S rRNA methyltransferase GidB [Nautilia profundicola AmH]
gi|223589948|gb|ACM93684.1| methyltransferase GidB [Nautilia profundicola AmH]
Length = 175
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ K + F LKW+K + T E+ +EDSL + + +D+G+G GFP
Sbjct: 1 MNKFDIFTNELLKWNKVHKFTNYKTPEEIR-EQIEDSLYPLEKIKHYKTALDIGTGAGFP 59
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDV 144
G++ +I + + LV E K+ SFL Y+ ++ K+ R+++A I ++
Sbjct: 60 GLVLAIAMPETKWYLV---EPLKKRYSFLNYMKIKLNLDNVKIVPSRLEKAD--IDPVEL 114
Query: 145 ISARALADLDTLLEYSFPWL 164
I+ RA+ ++E S P+L
Sbjct: 115 ITTRAVMPTSKIIEISRPYL 134
>gi|262278902|ref|ZP_06056687.1| methyltransferase GidB [Acinetobacter calcoaceticus RUH2202]
gi|299770414|ref|YP_003732440.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. DR1]
gi|262259253|gb|EEY77986.1| methyltransferase GidB [Acinetobacter calcoaceticus RUH2202]
gi|298700502|gb|ADI91067.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. DR1]
Length = 210
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + P + +D+G
Sbjct: 18 SLSDEALALLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILNDLPEGRL-LDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI--QEAP 136
+GGG PG+I I L + V L++S KK FL+ + V R+ Q+
Sbjct: 77 TGGGMPGMI--IALCQPQRQCV-LLDSNGKKIRFLKQFIADLKLSNVVAVQTRVENQDTI 133
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI++RA A L ++ + P+L+Q
Sbjct: 134 DELGQFDVITSRAFASLTDFVDAAQPYLHQ 163
>gi|163787556|ref|ZP_02182003.1| glucose-inhibited division protein B [Flavobacteriales bacterium
ALC-1]
gi|159877444|gb|EDP71501.1| glucose-inhibited division protein B [Flavobacteriales bacterium
ALC-1]
Length = 208
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ + + E L+ W+ KIN+VS +++ ++RHV SL +V Q SI +
Sbjct: 10 DLTETQINQFEALEGLYKDWNAKINVVSRKDIDELYLRHVLHSLAIAKVIQFKDNSSI-L 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+GGGFPG+ +I + + +L++S NKK + V + K R++
Sbjct: 69 DVGTGGGFPGVPLAILFPNCK---FHLVDSINKKLKVIDAVCEAIELTNVKTTHSRVEAI 125
Query: 136 PQMITTCDVISARALA 151
+ T D I +RA+
Sbjct: 126 DE---TFDFIVSRAVT 138
>gi|163791212|ref|ZP_02185629.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
gi|159873543|gb|EDP67630.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
Length = 238
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
V+ + +++ + + L +W++KINL + + E+ +++H DS+ + D
Sbjct: 17 VTEKQMKQFDQYLKLLQEWNEKINLTAITEKEEVYLKHFYDSITAGLYVNFNNGVQSLCD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I +E V +++S NK+ FL + + G F A
Sbjct: 77 VGAGAGFPSIPLKIIFPQLE---VTIVDSLNKRIQFLTLLAKTLELDGVHFYHDRAETFG 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ Q + D ++ARA+A + L E P +
Sbjct: 134 QNKQFRESFDFVTARAVARMSVLAELCLPLV 164
>gi|332978549|gb|EGK15257.1| glucose inhibited division protein B [Psychrobacter sp. 1501(2011)]
Length = 225
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S E KL + L W+K NL + ++ I+H+ D L + H +D+G+
Sbjct: 32 ISAEQRGKLMLYLDKLLFWNKAYNLTAIKQPKEALIKHIIDCLAILP-HLKSGKLLDIGT 90
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR-YVVQKTAARGKVFACRIQE-APQM 138
G G PG+I +I E V +++S KK F+R ++ + A RI+ P+
Sbjct: 91 GAGLPGVIIAICQPQRE---VTVLDSNQKKIRFIRQFISELKITNVTPVASRIENFVPEE 147
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DV+++RA A L ++ + P L
Sbjct: 148 HDKFDVVTSRAFASLTDFVDAAEPRL 173
>gi|269798906|ref|YP_003312806.1| methyltransferase GidB [Veillonella parvula DSM 2008]
gi|269095535|gb|ACZ25526.1| methyltransferase GidB [Veillonella parvula DSM 2008]
Length = 250
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 14/143 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIIT 89
+Y ++ +K +NL + +++ I+H+ DSL + S ID+G+G GFPGI
Sbjct: 41 YYVHMIETNKYLNLTGITNMKEVVIKHMIDSLSCYDSEIIKSGMTIIDVGTGAGFPGIPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCD 143
+I S++ V L +S K+ +FL V+ + T G+ Q+ + + D
Sbjct: 101 AIYDRSLK---VTLFDSLKKRLNFLESVIDELKLTNCTTLHGRAEDLSHQDYRE---SFD 154
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+ ++RA+A L LLE++ P++ +
Sbjct: 155 IATSRAVARLPILLEWTVPYVKE 177
>gi|331700959|ref|YP_004397918.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
gi|329128302|gb|AEB72855.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
Length = 245
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR- 64
+N + L V+ + +++ + ++ L + ++ +NL S + + +++H DS+
Sbjct: 2 NNDQFKKALLDKGIEVTDQQMDQFDAYFKLLVAVNEHVNLTSITEKPEVYLKHFYDSITP 61
Query: 65 ---VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
V Q+ P D+G+G GFP + I ++ V +++S NK+ +FL +V++
Sbjct: 62 AFFVSQIKTAPLSICDVGAGAGFPSLPLKILFPQLK---VTIVDSLNKRINFLTTLVKEL 118
Query: 122 AARG-KVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPW 163
G ++F R +E + D+++ARA+A L L E P
Sbjct: 119 NLTGVELFHARAEEFGGKRSEHREQYDLVTARAVARLTVLSELCLPL 165
>gi|330685280|gb|EGG96941.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU121]
Length = 239
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW- 75
N +S E+ + +Y L ++W++K+NL S + + +++H DS+ PS +
Sbjct: 13 NNIELSNTQKEQFQTYYQLLVEWNEKMNLTSITDEHEVYLKHFYDSIT-------PSFYY 65
Query: 76 --------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFKGSLSICDVGAGAGFPSIPLKIIFPELK---VTIVDSLNKRIQFLNHLADALGLQDVS 122
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
F E + D+++ARA+A L L E P +
Sbjct: 123 FVHDRAETFGKGDYRESYDIVTARAVARLTVLSELCLPLV 162
>gi|294626435|ref|ZP_06705035.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666222|ref|ZP_06731475.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599234|gb|EFF43371.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603995|gb|EFF47393.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 212
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 34 YLALLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIASGTLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|207722122|ref|YP_002252560.1| methyltransferase [Ralstonia solanacearum MolK2]
gi|206587296|emb|CAQ17880.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum MolK2]
Length = 225
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A ++ L++L+ + L KW++ NL + D H+ DSL
Sbjct: 9 ADARSELDAGARALGLSLDAAQLDRLQAYQALLGKWNRVYNLTAIRDAGDMLTHHLLDSL 68
Query: 64 --------RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RV ++ P +D+GSGGG PGI +I I +V++++ KK +FL
Sbjct: 69 AAVPRIAERVRRVQPEAPRVLDVGSGGGLPGIPLAIACPDISVTMVDIVQ---KKTAFL 124
>gi|294794211|ref|ZP_06759347.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
gi|294454541|gb|EFG22914.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
Length = 239
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 77/143 (53%), Gaps = 14/143 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLGSGGGFPGIIT 89
+Y ++ +K +NL + +++ I+H+ DSL + ++ + ID+G+G GFPGI
Sbjct: 30 YYVHMIETNKYLNLTGITDMKEVVIKHMIDSLSCYNSEIIKFGMSIIDVGTGAGFPGIPL 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCD 143
+I S++ V L +S K+ +FL V+ + T G+ Q+ + + D
Sbjct: 90 AIYDRSLK---VTLFDSLKKRLNFLESVIDELKLTNCTTLHGRAEDLSHQDYRE---SFD 143
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+ ++RA+A L LLE++ P++ +
Sbjct: 144 IATSRAVARLPILLEWTVPYVKE 166
>gi|238061907|ref|ZP_04606616.1| small subunit ribosomal RNA methyltransferase G [Micromonospora sp.
ATCC 39149]
gi|237883718|gb|EEP72546.1| small subunit ribosomal RNA methyltransferase G [Micromonospora sp.
ATCC 39149]
Length = 233
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ + V + P + +D+GSG G PG++ +I + V L
Sbjct: 31 GLIGPREAPRIWDRHLLNCAAVAERIPPDASVLDVGSGAGLPGLVLAIARPDLT---VTL 87
Query: 104 IESKNKKASFLRYVVQK--TAARGKVFACRIQEAPQMIT-----TCDVISARALADLDTL 156
+E ++ SFL VV+ A +VF R +EA T + D+++ARA+A LD L
Sbjct: 88 VEPLARRTSFLIEVVEDLGLAKSVRVFRGRAEEAATGSTGVGPFSADIVTARAVAPLDRL 147
Query: 157 LEYSFP 162
+ P
Sbjct: 148 AAWCLP 153
>gi|226947203|ref|YP_002802276.1| 16S rRNA methyltransferase GidB [Azotobacter vinelandii DJ]
gi|226722130|gb|ACO81301.1| Glucose inhibited division protein B, gidB [Azotobacter vinelandii
DJ]
Length = 215
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDL 78
+S E+L + L +KW+K NL + ++ RH+ DSL V Q+ W+D+
Sbjct: 22 ELSERQREQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVTPQIAEAGDDWLDV 81
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
GSGGG PG+ +I G L++S KK FL V
Sbjct: 82 GSGGGMPGVPLAILFP---GRRFTLLDSNGKKTRFLTQV 117
>gi|238021265|ref|ZP_04601691.1| hypothetical protein GCWU000324_01163 [Kingella oralis ATCC 51147]
gi|237868245|gb|EEP69251.1| hypothetical protein GCWU000324_01163 [Kingella oralis ATCC 51147]
Length = 213
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N+S +KL + L KW+K NL + H+ DSL + ID+G
Sbjct: 18 NISPAQQQKLLAYLALLQKWNKTYNLTALRDPAQMVSHHLLDSLTLLPYLAQAESMIDVG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGG P I +I ++ + ++++ +KK +FLR + V + R++E
Sbjct: 78 SGGGMPAIPAAICRPDLQ---ITMVDANSKKTTFLRQAAIELGLENVAVNSSRVEELGGQ 134
Query: 139 ITTCDVISARALADL 153
D++++RA A+L
Sbjct: 135 --RADIVTSRAFAEL 147
>gi|226952976|ref|ZP_03823440.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ATCC 27244]
gi|294650558|ref|ZP_06727915.1| glucose-inhibited division protein B [Acinetobacter haemolyticus
ATCC 19194]
gi|226836297|gb|EEH68680.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ATCC 27244]
gi|292823555|gb|EFF82401.1| glucose-inhibited division protein B [Acinetobacter haemolyticus
ATCC 19194]
Length = 211
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L L + + W+K NL + ++ ++H+ DSL + P + +D+G
Sbjct: 18 SLSEEALTLLLKYQDALVLWNKAYNLTAIREPKEMLVKHLLDSLSILNDLPAGRL-LDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+GGG PG+I I L E V L++S KK FL+ + + + E+ I
Sbjct: 77 TGGGMPGMI--IALCQPERDCV-LLDSNGKKIRFLKQFIADLKLKNVIAVQTRVESEDSI 133
Query: 140 TTC---DVISARALADLDTLLEYSFPWLYQK 167
+ DVI++RA A L + + P+++ +
Sbjct: 134 SELGHFDVITSRAFASLTDFVNAAQPYMHDQ 164
>gi|322379072|ref|ZP_08053475.1| Methyltransferase GidB [Helicobacter suis HS1]
gi|321148564|gb|EFX43061.1| Methyltransferase GidB [Helicobacter suis HS1]
Length = 179
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGI 87
L+ F L L+W+ NL + ++ED H+ DS++V + P+ + +D+GSG GFP +
Sbjct: 5 LQRFATLLLEWNCIHNLSGAKSLEDIE-AHINDSIQVLDFIKPFDT-CLDIGSGAGFPAL 62
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVI 145
S+ L+E KK++FL +V A ++ RIQ P I D+I
Sbjct: 63 PLSVFCPHAR---FILVEPNIKKSAFLYHVKNTLALDNLQIKRTRIQTLNPLEIEKMDLI 119
Query: 146 SARALADLDTLLEYSFPWL 164
++RAL LL P+L
Sbjct: 120 TSRALMPTQDLLALGMPFL 138
>gi|77748759|ref|NP_644464.2| 16S rRNA methyltransferase GidB [Xanthomonas axonopodis pv. citri
str. 306]
gi|23821590|sp|Q8PF23|RSMG_XANAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 34 YLALLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIASGALADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|28379586|ref|NP_786478.1| glucose-inhibited division protein B [Lactobacillus plantarum
WCFS1]
gi|38257501|sp|Q88T09|RSMG_LACPL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28272426|emb|CAD65350.1| cell division protein GidB [Lactobacillus plantarum WCFS1]
Length = 244
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWI 76
++ + L + ++ L + +K+ NL + + + +++H DSL V L P
Sbjct: 17 LTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQPLTIC 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-- 133
D+G+G GFP I I ++ V +++S NK+ +FL +VQ+ G K F R +
Sbjct: 77 DVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQLGLTGVKTFHDRAETF 133
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+ +ARA+A L L E P +
Sbjct: 134 AGKKSAHRESYDIATARAVARLSVLSELCLPLV 166
>gi|256829386|ref|YP_003158114.1| glucose inhibited division protein [Desulfomicrobium baculatum DSM
4028]
gi|256578562|gb|ACU89698.1| glucose inhibited division protein [Desulfomicrobium baculatum DSM
4028]
Length = 214
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 29 LEYFYFLFLKWSKKINLVSSST--------VEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
L + L +KW+ ++NLV +T ++D W H+ D L+ L P P+ +DLG+
Sbjct: 29 LSVYLGLLVKWNSRMNLVGPATWTEILDTLIQDSW--HLADLLQT--LAPQPAQTLDLGA 84
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL-RYVVQKTAARGKVFACRIQEAPQMI 139
G G PGI + + G L+E + K+A F+ + V R +V R++ P
Sbjct: 85 GAGLPGIPLRV---FWQQGDYYLVEPRQKRAIFMEQAVAHMKLPRTRVICARMEALPPAR 141
Query: 140 TTCDVISARALADLDTLL 157
+I +RA LL
Sbjct: 142 REAGLIVSRAFMPWQKLL 159
>gi|238797881|ref|ZP_04641373.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
mollaretii ATCC 43969]
gi|238718297|gb|EEQ10121.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
mollaretii ATCC 43969]
Length = 206
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ N LLN ++ +KL+ + L KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLNSLLNAADIELPEQQKLQLIAYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVNT 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQK 120
H +ID+G+G G PGI +I L++S K+ FLR V ++
Sbjct: 63 HLQGRRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLSNIEP 119
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+R + FA + D + +RA A L +L +
Sbjct: 120 VQSRVEDFAAK--------PPFDGVISRAFASLQDMLSW 150
>gi|227834358|ref|YP_002836065.1| glucose-inhibited division protein B [Corynebacterium aurimucosum
ATCC 700975]
gi|262183090|ref|ZP_06042511.1| 16S rRNA methyltransferase GidB [Corynebacterium aurimucosum ATCC
700975]
gi|227455374|gb|ACP34127.1| glucose-inhibited division protein B [Corynebacterium aurimucosum
ATCC 700975]
Length = 209
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
+ V W RH+ + V ++ P + ID+GSG G PGI +I + + LIE
Sbjct: 41 IGPREVPRLWERHLINCAVVAEVMPEGATLIDVGSGAGLPGIPLAIARPDLN---ITLIE 97
Query: 106 SKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYSFP 162
K++++L VV V R +E P + + D++++RA+A L L ++S P
Sbjct: 98 PLLKRSTYLNEVVDLLGLDNVTVIRGRAEEGPVKKAVKGADIVTSRAVAPLGKLAKWSLP 157
Query: 163 WLYQ 166
+ +
Sbjct: 158 LVRK 161
>gi|294341940|emb|CAZ90369.1| putative Methyltransferase gidB (Glucose-inhibited division protein
B) [Thiomonas sp. 3As]
Length = 224
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDLG 79
+R+ + L+Y L +W++ NL + +E H+ D L P +D+G
Sbjct: 31 ARQRQQLLDY-TALLQRWNRVFNLTAVRDLEGIARLHLADCLAALPALQRLAPRRLLDVG 89
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGG PGI+ +I L E V+LI++ KK +FL+ R V R+ EA
Sbjct: 90 SGGGLPGIVFAIGLPEAE---VHLIDTVQKKCAFLQQTCGSLQLRQVNVHHARV-EALAD 145
Query: 139 ITTCDVISARALADLDTLLEYS 160
D I++RA +DL L++ +
Sbjct: 146 ARGFDCITSRAFSDLPLLIQST 167
>gi|294792405|ref|ZP_06757552.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
gi|294456304|gb|EFG24667.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
Length = 244
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 14/153 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLG 79
+ E + L +Y ++ +K +NL +++ ++H+ DSL + S ID+G
Sbjct: 25 TEEQAKDLYMYYAHMIETNKYLNLTGIIDMKEVVVKHMIDSLSCYDSEIIKSGMTIIDVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQ 133
+G GFPGI +I S++ V L +S K+ +FL V+ K T G+ Q
Sbjct: 85 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESVIDKLKLTNCTTLHGRAEDLSHQ 141
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + D+ ++RA+A L LLE++ P++ +
Sbjct: 142 DYRE---SFDIATSRAVARLPILLEWTVPYVKE 171
>gi|302340302|ref|YP_003805508.1| methyltransferase GidB [Spirochaeta smaragdinae DSM 11293]
gi|301637487|gb|ADK82914.1| methyltransferase GidB [Spirochaeta smaragdinae DSM 11293]
Length = 223
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYP-SIWIDLG 79
+K E + L W++K+ LV +V++ RH+ DSL L P P S +D+G
Sbjct: 22 QKCEVYLKELLFWNRKVGLVKMESVDELVFRHLYDSLAPLPLLEASGLLPGPGSGVVDIG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
SGGGFP I ++ L E L+E +KA FL+ V
Sbjct: 82 SGGGFPAIPLALALPRYE---YTLVERSGRKAGFLQNAV 117
>gi|146318067|ref|YP_001197779.1| 16S rRNA methyltransferase GidB [Streptococcus suis 05ZYH33]
gi|146320245|ref|YP_001199956.1| 16S rRNA methyltransferase GidB [Streptococcus suis 98HAH33]
gi|253751261|ref|YP_003024402.1| methyltransferase GidB [Streptococcus suis SC84]
gi|253753162|ref|YP_003026302.1| methyltransferase GidB [Streptococcus suis P1/7]
gi|253754985|ref|YP_003028125.1| methyltransferase GidB [Streptococcus suis BM407]
gi|166224623|sp|A4VZL7|RSMG_STRS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224625|sp|A4VTE0|RSMG_STRSY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145688873|gb|ABP89379.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 05ZYH33]
gi|145691051|gb|ABP91556.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 98HAH33]
gi|251815550|emb|CAZ51133.1| methyltransferase GidB [Streptococcus suis SC84]
gi|251817449|emb|CAZ55190.1| methyltransferase GidB [Streptococcus suis BM407]
gi|251819407|emb|CAR44867.1| methyltransferase GidB [Streptococcus suis P1/7]
gi|292557829|gb|ADE30830.1| Glucose inhibited cell division protein [Streptococcus suis GZ1]
gi|319757540|gb|ADV69482.1| 16S rRNA methyltransferase GidB [Streptococcus suis JS14]
Length = 237
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGII 88
++ L ++W++KINL + + + +++H DS+ + P +D+G+G GFP +
Sbjct: 28 YFQLLVEWNEKINLTAITEESEVYLKHFYDSIAPLLQGHIQNEPLRLLDIGAGAGFPSLP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCDV 144
I ++ V +I+S NK+ +FL + ++ G F A + D+
Sbjct: 88 MKIIFPQLD---VTIIDSLNKRINFLHLLAEELELEGVHFYHGRAEDFAQDKNFRAQFDL 144
Query: 145 ISARALADLDTLLEYSFPWL 164
++ARA+A + L E + P+L
Sbjct: 145 VTARAVARMQILSELTIPYL 164
>gi|21110592|gb|AAM39000.1| glucose inhibited division protein B [Xanthomonas axonopodis pv.
citri str. 306]
Length = 260
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 82 YLALLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIASGALADLGTGPGLPGIPL 138
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ A EA D ++ARA
Sbjct: 139 AITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTARA 195
Query: 150 LADLDTL 156
LDTL
Sbjct: 196 ---LDTL 199
>gi|297588069|ref|ZP_06946713.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
gi|297574758|gb|EFH93478.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
Length = 230
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 16 LNTYNVSRET--LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
LN Y + + ++ L + L L+ +K +NL + + E F ++H DSL V L +
Sbjct: 7 LNDYEIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEE 66
Query: 74 --IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARG 125
ID+G+G GFP I I + ++ L++S K+ FLR V+ + A
Sbjct: 67 NKTIIDVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLRDVIDELQLTDIKAVHE 123
Query: 126 KVFAC-RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ C R E + C +RA++ L+TL E+ P++
Sbjct: 124 RAEECTRTAEYRERYDYC---ISRAVSKLNTLAEFCLPFV 160
>gi|288818500|ref|YP_003432848.1| glucose inhibited division protein [Hydrogenobacter thermophilus
TK-6]
gi|288787900|dbj|BAI69647.1| glucose inhibited division protein [Hydrogenobacter thermophilus
TK-6]
gi|308752090|gb|ADO45573.1| methyltransferase GidB [Hydrogenobacter thermophilus TK-6]
Length = 196
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Query: 17 NTYNVSRETLEKLEYFYFLFLK-WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
N +++S + +E L Y Y LK W+K L + E IRH DSL + +
Sbjct: 9 NGFDLSDQQVE-LFYTYMQELKKWNKVHRLTAIEEEEQIVIRHFVDSLTLALCFEQKGLD 67
Query: 76 I------DLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARGKV 127
+ D+GSGGGFPG+ I G +N L+ES +KK +FL YV K +V
Sbjct: 68 VKGKSVCDVGSGGGFPGVPLKIYY----GPQINLTLVESVSKKCAFLEYVKAKLGLDYRV 123
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLL 157
R ++ + + D++ RAL L+ ++
Sbjct: 124 LCKRAEQLRE--NSFDIVVCRALGKLEDIV 151
>gi|257871375|ref|ZP_05651028.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
gi|257805539|gb|EEV34361.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
Length = 237
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
+S E L++ +Y ++W++K+NL + + ++ +++H DS+ + + + + D
Sbjct: 16 ELSSEQLKQFATYYDRLIEWNQKMNLTAITDQKEVYLKHFYDSISLAFVTAFKEDAHLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+GSG GFP I I ++ + +++S NK+ +FL+ +V + +F R +
Sbjct: 76 VGSGAGFPSIPLKIIFPQLK---ITIVDSLNKRITFLQTLVADLGLKDVYLFHDRAETFG 132
Query: 137 Q--MITTCDVISARALADLDTLLEYSFPWL 164
Q + D ++ARA+A L+ L E P +
Sbjct: 133 QKEFRESFDYVTARAVARLNILTELCLPLV 162
>gi|307133312|ref|YP_003885328.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Dickeya
dadantii 3937]
gi|306530841|gb|ADN00772.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Dickeya
dadantii 3937]
Length = 206
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 7 NSIL-RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
NS+L RA L+ R+ + L+Y L KW+K NL S E +RH+ DSL V
Sbjct: 6 NSLLQRAGIALS----DRQKDQLLQYVALLH-KWNKAYNLTSVREPEQMLVRHIMDSL-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ H S +ID+G+G G PG+ +I + + V L++S K+ FLR VQ G
Sbjct: 60 VEPHLAGSRFIDVGTGPGLPGVPLAI--ARPDAHFV-LLDSLGKRVRFLRQ-VQHELNLG 115
Query: 126 KV--FACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ R+++ P VIS RA A L ++ +
Sbjct: 116 NIEPVQSRVEDFPAEPPFDGVIS-RAFASLQDMVNW 150
>gi|91777102|ref|YP_546858.1| methyltransferase GidB [Methylobacillus flagellatus KT]
gi|123253820|sp|Q1GXM0|RSMG_METFK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91711089|gb|ABE51017.1| 16S rRNA m(7)G-527 methyltransferase [Methylobacillus flagellatus
KT]
Length = 205
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++ E EKL + L KW+K NL + ED H+ DSL V P S+ +D+G
Sbjct: 15 DLPAEVTEKLLAYLALLAKWNKVHNLTAVRDPEDMVTLHLLDSLSVLPHVPSGSL-LDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ----E 134
SG G PGI+ +I ++ V I++ KKASF+R + +V A R++ E
Sbjct: 74 SGAGLPGIVLAICRPDLQ---VTTIDAVQKKASFMRQAKAELQIDNLQVVAGRVEQFEPE 130
Query: 135 APQMITTCDVISARALADL 153
AP D + +RA +++
Sbjct: 131 AP-----FDTVISRAFSEI 144
>gi|257057911|ref|YP_003135743.1| glucose-inhibited division protein B [Saccharomonospora viridis DSM
43017]
gi|256587783|gb|ACU98916.1| glucose-inhibited division protein B [Saccharomonospora viridis DSM
43017]
Length = 225
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F L + L+ V+ W RHV +S V + P + ID+GSG GFPG+ +I
Sbjct: 23 FVELLASHGVERGLIGPREVDRLWDRHVLNSAVVNERIPMGARVIDVGSGAGFPGVPLAI 82
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQK-----TAARGKVFACRIQEAPQMITTCDVIS 146
++ + L+E ++ +L VV T RG+ ++ + I DV++
Sbjct: 83 ARPDLD---IVLLEPMARRVEWLSEVVDTLDLPVTVERGRAEEKVVR---RRIDAADVVT 136
Query: 147 ARALADLDTLLEYSFP 162
ARA+A L L ++ P
Sbjct: 137 ARAVAPLARLSQWCLP 152
>gi|224024052|ref|ZP_03642418.1| hypothetical protein BACCOPRO_00769 [Bacteroides coprophilus DSM
18228]
gi|224017274|gb|EEF75286.1| hypothetical protein BACCOPRO_00769 [Bacteroides coprophilus DSM
18228]
Length = 209
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGII 88
Y L+ W+ KIN++S + + + HV SL +V P + +DLG+GGGFPGI
Sbjct: 22 LYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINFKPGTEV-MDLGTGGGFPGIP 80
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQEAPQMITTCDV 144
+I LV+ I K +R + AA G CR +E Q D
Sbjct: 81 LAILFPDTHFHLVDSIGKK------VRVATEIAAAVGLKNVTTRHCRAEEEKQRF---DF 131
Query: 145 ISARALADLDTLLE 158
+ +RA+ L LL+
Sbjct: 132 VVSRAVMPLTDLLK 145
>gi|229014648|ref|ZP_04171762.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
gi|229065141|ref|ZP_04200434.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|229136307|ref|ZP_04265054.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|229170185|ref|ZP_04297871.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|228613286|gb|EEK70425.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|228647179|gb|EEL03267.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|228716170|gb|EEL67889.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|228746659|gb|EEL96548.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
Length = 239
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 21/157 (13%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S LE+ ++ ++W++K+NL + + E+ +++H DS+ + + P D
Sbjct: 16 SLSSRQLEQFGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSVTAAFYYDFSKPFSICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFA 129
+G+G GFP I I ++ V +++S K+ +FL ++ QK R + F
Sbjct: 76 VGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFG 132
Query: 130 CR--IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ ++EA D++ ARA+A L L E P +
Sbjct: 133 KKEGVREA------YDIVMARAVARLSVLSELCLPLV 163
>gi|266620966|ref|ZP_06113901.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
gi|288867388|gb|EFC99686.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
Length = 243
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WIDLGSGGGFPGI 87
+Y L +W+K +NL + + ++ +H DSL + + S ID+G+G GFPGI
Sbjct: 31 YYELLDEWNKVMNLTAITDQKEVITKHFVDSLALVKAMGEISTKEYKIIDIGTGAGFPGI 90
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITT 141
I ++ + L++S NK+ FL V+++ TA + A +
Sbjct: 91 PLKIAFPQLK---ITLMDSLNKRIKFLNEVIEQLGLKEITAVHSR--AEDLGRDKDYREQ 145
Query: 142 CDVISARALADLDTLLEYSFPWL 164
D+ +RA+A+L TL EY P++
Sbjct: 146 YDLSVSRAVANLSTLSEYCMPFV 168
>gi|197294687|ref|YP_001799228.1| 16S rRNA methyltransferase GidB [Candidatus Phytoplasma
australiense]
gi|226725361|sp|B1VAK6|RSMG_PHYAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171854014|emb|CAM11979.1| Glucose-inhibited division protein B [Candidatus Phytoplasma
australiense]
Length = 208
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L + L + ++ L++ + +Y + +KK NL + ++ D + +H DSL + ++
Sbjct: 1 MLYPDLLTKKFKLNPHQLQQFDLYYRFLNQENKKYNLTALISLSDVYCKHFYDSLILKEI 60
Query: 69 HPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ I D+GSG GFP I +++ + ++ES KK +FL+ Q T G
Sbjct: 61 LDFNQIQNVCDVGSGAGFPSFPLKIIYPNLK---ITIVESSLKKINFLK---QLTVVLGL 114
Query: 127 VFACRI-QEAPQMITTCDVISARALADLDTLLEY 159
C + Q A + + D + RAL LD +L++
Sbjct: 115 KNICFVHQRAEKHTLSYDCVLVRALGRLDLILKW 148
>gi|296118599|ref|ZP_06837177.1| 16S rRNA methyltransferase GidB [Corynebacterium ammoniagenes DSM
20306]
gi|295968498|gb|EFG81745.1| 16S rRNA methyltransferase GidB [Corynebacterium ammoniagenes DSM
20306]
Length = 207
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ V ++ L E ++ L + V W RH+ + + ++ +
Sbjct: 9 VEPSEVFKDRLPLAEKYHDLLATDGSTRGFIGPREVPRLWDRHLINCAVITEVMDQGATV 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFA 129
+D+GSG G PGI +I ++ + LIE K++ FL+ VV T RG
Sbjct: 69 VDVGSGAGLPGIPVAIARPDLK---ITLIEPLLKRSVFLQEVVDALELDNVTVIRG---- 121
Query: 130 CRIQEAP--QMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E P + + D++++RA+A L L ++S P + +
Sbjct: 122 -RAEEGPVKKAVAGADIVTSRAVAPLGKLAKWSLPLVRR 159
>gi|332292513|ref|YP_004431122.1| methyltransferase GidB [Krokinobacter diaphorus 4H-3-7-5]
gi|332170599|gb|AEE19854.1| methyltransferase GidB [Krokinobacter diaphorus 4H-3-7-5]
Length = 209
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ +E+ L+ W+ KIN+VS +++ ++RHV SL + ++ + S +D
Sbjct: 10 DLTETQIEQFSKLKDLYHDWNLKINVVSRKDIDEIYLRHVLHSLGIAKIQRFNPGSKILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPG+ +I + +L++S KK + VV+ K R++
Sbjct: 70 VGTGGGFPGVPLAILHPEVN---FHLVDSIGKKIKVVNEVVEGLGITNVKTTNDRVETVK 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA+A ++T + +
Sbjct: 127 DQ---YDFVVSRAVAQMETFVHW 146
>gi|282848773|ref|ZP_06258168.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
gi|282581559|gb|EFB86947.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
Length = 250
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 14/143 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIIT 89
+Y ++ +K +NL + +++ ++H+ DSL + S ID+G+G GFPGI
Sbjct: 41 YYAHMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSEIIKSGMTIIDVGTGAGFPGIPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCD 143
+I S++ V L +S K+ +FL ++ K T G+ Q+ + + D
Sbjct: 101 AIYDRSLK---VTLFDSLKKRLTFLESIIDKLKLTNCTTLHGRAEDLSHQDYRE---SFD 154
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+ ++RA+A L LLE++ P++ +
Sbjct: 155 IATSRAVARLPILLEWTVPYVKE 177
>gi|257095886|ref|YP_003169527.1| methyltransferase GidB [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048410|gb|ACV37598.1| methyltransferase GidB [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 215
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S +KL + L KW++ L + S H+ DSL + P + +D+GS
Sbjct: 18 LSAPAQQKLLAYATLLAKWNRTYRLTAMSDPALAVSHHLLDSLALLPFVEAPPL-LDVGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGG PGI +I + V L++S +KKA+FL+ V + C EA + T
Sbjct: 77 GGGMPGIPLAIARPDLP---VVLLDSSSKKAAFLQQVAIELGLGNIAVHCGRVEAYRPTT 133
Query: 141 TCDVISARALADLDTLLEYS 160
I+ARA + L ++ S
Sbjct: 134 GFAAITARAFSHLAEFVQLS 153
>gi|163943162|ref|YP_001648046.1| glucose-inhibited division protein B [Bacillus weihenstephanensis
KBAB4]
gi|229564286|sp|A9VTL8|RSMG_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163865359|gb|ABY46418.1| methyltransferase GidB [Bacillus weihenstephanensis KBAB4]
Length = 239
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 21/157 (13%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S LE+ ++ ++W++K+NL + + E+ +++H DS+ + + P D
Sbjct: 16 SLSSRQLEQFGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSVTAAFYYDFSKPFSICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFA 129
+G+G GFP I I ++ V +++S K+ +FL ++ QK R + F
Sbjct: 76 VGAGAGFPSIPLKICFPHLK---VKIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFG 132
Query: 130 CR--IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ ++EA D++ ARA+A L L E P +
Sbjct: 133 KKEGVREA------YDIVMARAVARLSVLSELCLPLV 163
>gi|125554703|gb|EAZ00309.1| hypothetical protein OsI_22326 [Oryza sativa Indica Group]
Length = 210
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------IDLGSGGGFPGIITSIQL 93
+NL + + + RHV DSL V L P + +D+GSG G PG+I ++
Sbjct: 1 MNLTAVTDEGEVMTRHVADSLAV--LPPLERAYRGDLGGMRLVDVGSGAGLPGLILAVAR 58
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC----RIQEAPQMITTCDVISARA 149
S + L+ES K+ FL + V+ C + ++P DV ARA
Sbjct: 59 PSWK---FTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAENVGQSPDFREAFDVAVARA 115
Query: 150 LADLDTLLEYSFPWL 164
+A+L L EY P +
Sbjct: 116 VAELKVLAEYCLPLV 130
>gi|315640393|ref|ZP_07895506.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
gi|315483849|gb|EFU74332.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
Length = 238
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
++ E + + + ++ L ++W++KINL + + ++ +++H DS+ + + + D
Sbjct: 16 QLTDEQMYQFKRYFELLVEWNEKINLTAITEEKEVYLKHFYDSILLAFSEDFDANASLCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFA 129
+GSG GFP I I +++ V +++S NK+ +FL +VQ+ R + F
Sbjct: 76 VGSGAGFPSIPLKIVFPTLQ---VTIVDSLNKRITFLNELVQELGLEQVSLYHDRAETFG 132
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L E P +
Sbjct: 133 ----QNRDFRESFDYVTARAVARLNVLSELCLPLV 163
>gi|298695966|gb|ADI99188.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus ED133]
Length = 239
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHP 70
L +N+ +K ++ +Y L ++W++K+NL S + + +++H DS+ F +
Sbjct: 10 LKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHNVYLKHFYDSIAPSFYFDFNQ 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TA 122
SI D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 70 PISI-CDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVSFIH 125
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + F + + DV++ARA+A L L E P +
Sbjct: 126 DRAETFGKGVYRE-----SYDVVTARAVARLSVLSELCLPLV 162
>gi|284038937|ref|YP_003388867.1| methyltransferase GidB [Spirosoma linguale DSM 74]
gi|283818230|gb|ADB40068.1| methyltransferase GidB [Spirosoma linguale DSM 74]
Length = 209
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
N++ E E+ L+ W+ KIN++S ++ + +H+ SL ++ P I +
Sbjct: 12 NLTAEQKEQFAALDGLYRDWNAKINVISRQDIDALYEKHILHSLGIAKIVSFKPGTEI-L 70
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+G+GGGFPGI +I + LV+ I K K + + T A+ + R++
Sbjct: 71 DVGTGGGFPGIPLAILFPMADFHLVDSIGKKIKVVQEVSDALGLTNAKAE--QIRVE--- 125
Query: 137 QMITTCDVISARALADLDTLL 157
Q+ TT D + +RA+ L L
Sbjct: 126 QLNTTYDFVVSRAVTRLKPFL 146
>gi|329965433|ref|ZP_08302357.1| 16S rRNA methyltransferase GidB [Bacteroides fluxus YIT 12057]
gi|328522225|gb|EGF49339.1| 16S rRNA methyltransferase GidB [Bacteroides fluxus YIT 12057]
Length = 206
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E + Y L+ W+ KIN++S + + + HV SL +V P I +
Sbjct: 10 DLTEEQERQFAALYDLYSDWNSKINVISRKDIGNLYEHHVLHSLGIAKVVNFRPGTKI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEA 135
DLG+GGGFPGI +I + +L++S KK + + F R +E
Sbjct: 69 DLGTGGGFPGIPLAILFPEVR---FHLMDSIGKKIRVAAEIADSIGLKNVTFRHARAEEE 125
Query: 136 PQMITTCDVISARALADLDTLLE 158
Q T D + +RA+ L LL+
Sbjct: 126 KQ---TFDFVVSRAVMPLADLLK 145
>gi|254424200|ref|ZP_05037918.1| methyltransferase GidB [Synechococcus sp. PCC 7335]
gi|196191689|gb|EDX86653.1| methyltransferase GidB [Synechococcus sp. PCC 7335]
Length = 270
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 34/166 (20%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-----------------------QL 68
Y L+ ++++NL + + FW +H+ DSL +
Sbjct: 31 LYIQILEGNRQLNLTRITEPQAFWEKHLWDSLSGLAPWLSDIAEASKADTEAKTEVGAET 90
Query: 69 HPY-------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
PY P ID+G+GGGFPGI +I L+S+ L L+++ KK FL+ + Q+
Sbjct: 91 IPYFANDDSAPLRMIDIGTGGGFPGIPAAIALTSLAIDL-TLVDATRKKILFLQTLCQQL 149
Query: 122 AARGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWL 164
A R + P+ T D+ RA+ T EY P+L
Sbjct: 150 GLNTTCIADRAEALGRDPEHRETYDLALIRAVGSAATCAEYVMPFL 195
>gi|42521935|ref|NP_967315.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
gi|81618560|sp|Q6MQY9|RSMG1_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 1;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 1; Short=16S rRNA m7G
methyltransferase 1
gi|39574465|emb|CAE77969.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
Length = 205
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 34 FLFLKWS--KKINLVSSS-TVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPGIIT 89
+L L WS +++NL+S T E+ HV D L + P + D GSGGG PG+I
Sbjct: 28 YLDLLWSSNEELNLISRKMTYEELIDNHVIDCLLPIKDFPKDVKVAADFGSGGGLPGVIY 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+IQ ++E +L E K FL V A ++ E P + +V+++RA
Sbjct: 88 AIQFPNVE---YHLFEKSKLKQDFLNRCVS-IAPNLRIHG----EIPPKLEKIEVVTSRA 139
Query: 150 LADLDTLLEYS 160
+D +LE+S
Sbjct: 140 FKPVDVILEFS 150
>gi|113955529|ref|YP_731543.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CC9311]
gi|123327618|sp|Q0I7M9|RSMG_SYNS3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113882880|gb|ABI47838.1| methyltransferase GidB [Synechococcus sp. CC9311]
Length = 254
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWIDLGSG 81
L +L+ L W+ ++NL E+FWI V DSL + + ID+G+G
Sbjct: 27 LSQLKELQALLRHWNSRVNLTRLVENEEFWIAQVFDSLWPLEKELRTPDLTRRCIDVGTG 86
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVFACRIQEAPQMI 139
GGFPG+ +I L G + L++S +K + + + R V R++ Q
Sbjct: 87 GGFPGLAVAIALP---GTSLTLVDSVGRKTAAVESMANALGLGTRVDVRTERVEVTGQKR 143
Query: 140 T---TCDVISARALADLDTLLEYSFPWLYQK 167
+ T D+ ARA+A + EY P L +
Sbjct: 144 SCRGTFDLAMARAVATPPVVAEYLVPLLAHQ 174
>gi|90409268|ref|ZP_01217370.1| GidB [Psychromonas sp. CNPT3]
gi|90309628|gb|EAS37811.1| GidB [Psychromonas sp. CNPT3]
Length = 211
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR+ L T VS + + +L L +KW+K NL S + I+H+ DS+ V H
Sbjct: 11 LRSMISLTTLKVSDKQINQLIQLLELLVKWNKAYNLTSVRDPQQMLIKHIMDSI-VVSPH 69
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
ID+G+G G PG+ +I + + V L++S K+ F+R V + + F
Sbjct: 70 LQGQRLIDVGTGPGLPGLPLAI--LNPDKQFV-LLDSLGKRLRFIRQAVLELGLKNVEFI 126
Query: 129 ACRIQE-APQMITTCDVISARALADLDTLLEY 159
R++E P+ DV+ +RA A L +L +
Sbjct: 127 QSRVEEYHPE--EKFDVVLSRAFASLADMLNW 156
>gi|282900470|ref|ZP_06308419.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194663|gb|EFA69611.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
Length = 249
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSI-----WI 76
E +L+ Y L + +++INL + ++FW +H+ DSLR Q H P + I
Sbjct: 27 EQGNQLQKLYDLIVLANRQINLTRITEPKEFWEKHLWDSLRGVAPQQHFLPELNAAGSII 86
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEA 135
D+GSG GFPG+ I + V L++S KK +F+ ++K + R +E
Sbjct: 87 DIGSGAGFPGLPIGIVFPHYQ---VTLLDSTRKKVNFINSAIEKLPLSNATTILGRAEEI 143
Query: 136 PQMIT---TCDVISARALADLDTLLEYSFP 162
Q ++ RA+A EY+ P
Sbjct: 144 GQDTPYREKYNLAVIRAVASASICSEYALP 173
>gi|319957648|ref|YP_004168911.1| methyltransferase gidb [Nitratifractor salsuginis DSM 16511]
gi|319420052|gb|ADV47162.1| methyltransferase GidB [Nitratifractor salsuginis DSM 16511]
Length = 199
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR + + LE+LE+F L L+W++ NL + + ++ DSL
Sbjct: 6 LRVGLVKVGLELDERVLERLEHFTELLLEWNRVHNLTGARDRREIEA-NILDSLVPLSFV 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVF 128
P +D+G+G GFPG++ + I L E K+ASFLR ++ R +V
Sbjct: 65 SKPDSLLDVGTGAGFPGLVLAAAWPEIP---TVLCEPLKKRASFLRIAALEMGLERVEVA 121
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R+++ +IS+RA+ D LLE +
Sbjct: 122 RKRVEDLQH--EPFGLISSRAVTDTGLLLELT 151
>gi|325285552|ref|YP_004261342.1| Ribosomal RNA small subunit methyltransferase G [Cellulophaga
lytica DSM 7489]
gi|324321006|gb|ADY28471.1| Ribosomal RNA small subunit methyltransferase G [Cellulophaga
lytica DSM 7489]
Length = 226
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGIITSIQ 92
L+ W++KIN+VS +++ ++RHV S + FQ + +D+G+GGGFPGI +I
Sbjct: 42 LYADWNQKINVVSRKDIDEIYLRHVLHSTGIAKFQQFLPGTTVLDVGTGGGFPGIPLAIL 101
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
+ LV+ I KK +++VV + + D I +RA+A
Sbjct: 102 FPETQFTLVDAI---GKKIKVVQHVVDGLGLTN--VTAKHMRVEDLDAKFDFIVSRAVAA 156
Query: 153 LDTLLEY 159
+ T + +
Sbjct: 157 MPTFVRW 163
>gi|121281964|gb|ABM53568.1| conserved hypothetical protein [uncultured bacterium CBNPD1 BAC
clone 905]
Length = 209
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-P 72
Y N ++ +E KL+ Y W++KIN++S ++ + +HV SL + +++ + P
Sbjct: 7 YFPNLTDLQKEQFAKLDILYH---DWNEKINVISRKDIDALYTKHVLHSLGIAKINKFEP 63
Query: 73 SIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
++ D+G+GGGFPGI +I L+++I K K
Sbjct: 64 GTFVLDVGTGGGFPGIPLAILFPETRFYLIDVIAKKIK 101
>gi|228473568|ref|ZP_04058320.1| 16S rRNA methyltransferase GidB [Capnocytophaga gingivalis ATCC
33624]
gi|228274940|gb|EEK13750.1| 16S rRNA methyltransferase GidB [Capnocytophaga gingivalis ATCC
33624]
Length = 203
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQ 92
L+ +W+ +IN++S +E F I H+ SL + ++HP + +D+G+GGGFPGI +I
Sbjct: 25 LYKEWNARINVISRKDMEHFVIHHLLHSLGIAKIHPLSAGQKVLDVGTGGGFPGIPLAIL 84
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARAL 150
+ LV+ I K K VV++ A+ + Q+A + D I +RA+
Sbjct: 85 YPEVSFHLVDSIGKKIK-------VVEEVASALSLSNVTYQQARVETLAGQYDYIVSRAV 137
Query: 151 ADL 153
+
Sbjct: 138 TQM 140
>gi|253681207|ref|ZP_04862005.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
gi|253562445|gb|EES91896.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
Length = 243
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQ 92
L W+ K+NL + + ++ +H DS+++FQ + ID+G+GGGFPGI I
Sbjct: 36 LLKDWNSKVNLTAITEDKEIIKKHFIDSMKIFQFEYLKKANRIIDIGTGGGFPGIPMKII 95
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMITTCDVISAR 148
++ + L++S K+ + L ++ K + R +E P+ D + +R
Sbjct: 96 RPEVK---MVLLDSLRKRINVLDDILCKIGIDDVETIHGRAEEFSRNPKYREQFDAVVSR 152
Query: 149 ALADLDTLLEYSFPWL 164
A+A+L L E+ P++
Sbjct: 153 AVANLAALSEFCLPYV 168
>gi|85057734|ref|YP_456650.1| glucose inhibited division protein B [Aster yellows witches'-broom
phytoplasma AYWB]
gi|123518152|sp|Q2NJ22|RSMG_AYWBP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84789839|gb|ABC65571.1| glucose inhibited division protein B [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 212
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L + + ++++ L K ++Y K ++K+NL S ++ D +H DSL + ++ + ++
Sbjct: 7 LKDKFKLNKKQLNKFVFYYEFLKKENQKMNLTSLISLSDVCYKHFYDSLILKEIFDFNNV 66
Query: 75 --WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+GSG GFP I ++ + +IES KK +FL+ + F +
Sbjct: 67 TNLCDVGSGAGFPSFPLKILYPHLK---IIIIESSLKKINFLKQLASHLELDNVCFFHKR 123
Query: 133 QEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQK 167
E + + D + ARALA L+ +L++ P + ++
Sbjct: 124 VEQHDIAKNGSYDFVVARALARLEIILKWCVPLVKKR 160
>gi|119896434|ref|YP_931647.1| 16S rRNA methyltransferase GidB [Azoarcus sp. BH72]
gi|189039480|sp|A1K1Q5|RSMG_AZOSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119668847|emb|CAL92760.1| probable methyltransferase GidB [Azoarcus sp. BH72]
Length = 212
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI---WI 76
++ T +L F L LKW+K NL + ++ H+ DSL V PY S
Sbjct: 21 DIPTATQARLIAFGELLLKWNKVYNLTAIRAPQEVITHHLLDSLAVL---PYLSAVTRLA 77
Query: 77 DLGSGGGFPGIITSI---QLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRI 132
D+GSGGG PGI +I +LS I +E+ NKKASF + ++ + R+
Sbjct: 78 DIGSGGGLPGIPLAIVRPELSVIS------VETVNKKASFQQQAKIELGLGNFQPLNARV 131
Query: 133 QE-APQMITTCDVISARALADLDTLLEYS 160
+ P+ CD + +RA + L +E S
Sbjct: 132 ENLKPEQ--PCDGVISRAFSSLKDFVELS 158
>gi|254788515|ref|YP_003075944.1| 16S rRNA m7G527 methyltransferase [Teredinibacter turnerae T7901]
gi|237686626|gb|ACR13890.1| 16S rRNA m7G527 methyltransferase [Teredinibacter turnerae T7901]
Length = 211
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + LF+KW+K NL + ++ +H+ DSL V + H +ID+G+GGG PGI
Sbjct: 26 RLGAYLELFIKWNKTYNLSAIRDPQEMVSKHLLDSLSVAE-HLTGERFIDVGTGGGLPGI 84
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+I L++S KK FL V Q R E+ + D + +
Sbjct: 85 PLAITFPERH---FTLLDSAGKKTRFLFQVKQALGLHNVQVENRRVESFEPDELYDGVIS 141
Query: 148 RALADLDTLLEY 159
RA A L + +Y
Sbjct: 142 RAFASLQDMTDY 153
>gi|54027642|ref|YP_121884.1| 16S rRNA methyltransferase GidB [Nocardia farcinica IFM 10152]
gi|81602318|sp|Q5YMS1|RSMG_NOCFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54019150|dbj|BAD60520.1| putative ribosomal RNA small subunit methyltransferase [Nocardia
farcinica IFM 10152]
Length = 260
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+ +Y + L+ V W RH+ + V +L P + +D+GSG G
Sbjct: 27 DRLDVARRYYDALATAGVERGLIGPREVPRLWDRHILNCAVVAELMPESATVVDVGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-----TAARGKV-FACRIQEAPQ 137
PGI +I + + L+E ++ +FL + T RG+ + I+EA
Sbjct: 87 LPGIPLAIARPDLR---ITLVEPLLRRTAFLSEFIDAAGLDITVVRGRAEHSGVIKEA-- 141
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
DV+++RA+A L L ++S P L
Sbjct: 142 --GGADVVTSRAVAPLAKLAQWSLPLL 166
>gi|77361914|ref|YP_341489.1| glucose-inhibited division protein B [Pseudoalteromonas
haloplanktis TAC125]
gi|123589146|sp|Q3IK40|RSMG_PSEHT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76876825|emb|CAI88047.1| putative S-adenosyl-L-methionine-dependent methyltransferase
domain, could be a tRNA or lipid methylase
[Pseudoalteromonas haloplanktis TAC125]
Length = 206
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S E+ ++H+ DSL V H +ID+G+G G PG
Sbjct: 23 QQLVRYVELLTKWNKAYNLTSVRLPEEMMVKHIMDSL-VVAPHLPGHHYIDVGTGPGLPG 81
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVI 145
I+ +I L + L++S K+ FL +V + R++E Q D +
Sbjct: 82 IVLAIALPNTH---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEEY-QPSVKLDGV 137
Query: 146 SARALADLDTLLEY 159
+RA A L ++++
Sbjct: 138 LSRAFASLQDMVDW 151
>gi|332533708|ref|ZP_08409567.1| ribosomal RNA small subunit methyltransferase G [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036872|gb|EGI73333.1| ribosomal RNA small subunit methyltransferase G [Pseudoalteromonas
haloplanktis ANT/505]
Length = 206
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S E+ I+H+ DSL V H +ID+G+G G PG
Sbjct: 23 QQLVRYVELLDKWNKAYNLTSVRLPEEMMIKHIMDSL-VVAPHLPGHHYIDVGTGPGLPG 81
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVI 145
I+ +I L + + L++S K+ FL +V + R++E Q D +
Sbjct: 82 IVLAIALPNTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEEY-QPSVKLDGV 137
Query: 146 SARALADLDTLLEY 159
+RA A L ++++
Sbjct: 138 LSRAFASLQDMVDW 151
>gi|229106076|ref|ZP_04236689.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
gi|228677342|gb|EEL31606.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
Length = 239
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + + P D+
Sbjct: 17 LSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSICDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFP I I ++ V +++S K+ +FL ++ QK F A +
Sbjct: 77 GAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAETFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + +++ ARA+A L L E P +
Sbjct: 134 KEGVRESYEIVMARAVARLSVLSELCLPLV 163
>gi|256851845|ref|ZP_05557233.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260661894|ref|ZP_05862804.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|282931977|ref|ZP_06337441.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|297205469|ref|ZP_06922865.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
gi|256615803|gb|EEU20992.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260547363|gb|EEX23343.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|281303919|gb|EFA96057.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|297150047|gb|EFH30344.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
Length = 239
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--- 75
+ +S++ +++ +Y ++ ++ +NL + +E+ +++H DSL F YP ++
Sbjct: 15 FALSQKQIDQFSKYYQKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPF--LEYPELFKKA 72
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRI 132
D+G+G GFP I I + ++ + +++S NK+ FL + + ++ R
Sbjct: 73 RICDVGAGAGFPSIPIKILVPEMQ---LAIVDSLNKRLKFLADLTADLDLGQVELVHGRA 129
Query: 133 QEAPQMIT---TCDVISARALADLDTLLEYSFPWLYQ 166
++ Q + D+++ARA+A++ TL EY P + +
Sbjct: 130 EDIGQNVKYREKFDLVTARAVANMATLSEYCLPLVKE 166
>gi|332665463|ref|YP_004448251.1| ribosomal RNA small subunit methyltransferase G [Haliscomenobacter
hydrossis DSM 1100]
gi|332334277|gb|AEE51378.1| Ribosomal RNA small subunit methyltransferase G [Haliscomenobacter
hydrossis DSM 1100]
Length = 208
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L+ +W+ KIN+VS ++ + H+ SL +V P I +D+G+GGG PGI +I
Sbjct: 25 LYREWNAKINVVSRKDIDSLYAHHILHSLGIAKVINFKPGAEI-LDIGTGGGLPGIPLAI 83
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
+ L++ KK ++ +VQ A ++ D RA+
Sbjct: 84 VFPETQ---FTLVDGTGKKILVVKEIVQALGLSN--VDAHHARAEELKRQFDFTVCRAVT 138
Query: 152 DLDTLLEYSFPWLYQKK 168
LD L +S+P + +K+
Sbjct: 139 TLDKLCAWSWPLIKRKQ 155
>gi|227496611|ref|ZP_03926889.1| cell division methyltransferase [Actinomyces urogenitalis DSM
15434]
gi|226833891|gb|EEH66274.1| cell division methyltransferase [Actinomyces urogenitalis DSM
15434]
Length = 233
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 48 EHFADMLVAEGELRGLVGPRELPRLWSRHIVNSTAVVPFLPRRGSVADVGSGAGFPGIVV 107
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ +E V LI++ ++ +L VV + R A ++ D ++ARA
Sbjct: 108 ALMRPDLE---VTLIDTMERRVEWLELVVAELDLDN--VTIRRARAEEIKDRYDAVTARA 162
Query: 150 LADLDTLLEYS 160
+A+L L+ +
Sbjct: 163 VANLSKLVRLT 173
>gi|172038831|ref|YP_001805332.1| glucose inhibited division protein B [Cyanothece sp. ATCC 51142]
gi|171700285|gb|ACB53266.1| glucose inhibited division protein B [Cyanothece sp. ATCC 51142]
Length = 241
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----FQLHPYPS 73
+ ++E LEK E Y L +++INL + EDFW +H+ DSL F +
Sbjct: 16 WQPTQEQLEKWEILYQELLLVNRQINLTRITEPEDFWEKHLWDSLAGVIGLDFINYENSL 75
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS----FLRYVVQKTAARGKVFA 129
ID+G+G GFPG+ I S + + L++S KK FL + + A
Sbjct: 76 KVIDIGTGAGFPGLPIGIIFSHWK---LTLLDSTQKKIKVINLFLEALKLNNSQTVIGRA 132
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
I PQ T D+ RA+A+ EY P+L
Sbjct: 133 EDIGHLPQHRETYDLGLLRAVAEPSVCAEYVLPFL 167
>gi|110598116|ref|ZP_01386394.1| methyltransferase GidB [Chlorobium ferrooxidans DSM 13031]
gi|110340248|gb|EAT58745.1| methyltransferase GidB [Chlorobium ferrooxidans DSM 13031]
Length = 227
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D + L+A ++ + E LEKL ++ L +W+ K+NL+S I+H+ S+
Sbjct: 13 DELTTLQALCAEHSIELDTEKLEKLVHYGHLLEEWNLKVNLISRKEDSPVIIKHIFHSIL 72
Query: 65 VFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ H + +DLG+GGG PGI SI L+++ KK + + ++++
Sbjct: 73 ISSYHSFRKEERVLDLGTGGGLPGIPLSIAFPDTR---FLLVDATGKKITACQAMIKELG 129
Query: 123 ARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ R++E ++ D + +R +A L+ L Y+
Sbjct: 130 ITNAIAMHTRVEELKGVV--FDTVLSRQVAPLEQLCRYA 166
>gi|223983436|ref|ZP_03633622.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
gi|223964608|gb|EEF68934.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
Length = 233
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGFPGIITSIQL 93
L +W++K+NL + + E+ +H DSL F P ++ + D+G+G GFP + I
Sbjct: 31 LLQEWNEKMNLTAITEWEEVLEKHFYDSLVPFAGMPLNTVHLCDVGAGAGFPSLPLKIMN 90
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALA 151
++ + ++E NK+ FL+ V ++ + R ++ A + + D+++ARA+A
Sbjct: 91 PQLK---ITILEPLNKRVVFLKEVCRELQLDNVECLNVRAEDYAKEHRESFDLVTARAVA 147
Query: 152 DLDTLLEYSFP 162
+L L E P
Sbjct: 148 NLRVLAELCLP 158
>gi|78224741|ref|YP_386488.1| glucose inhibited division protein [Geobacter metallireducens
GS-15]
gi|123570638|sp|Q39PR1|RSMG_GEOMG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78195996|gb|ABB33763.1| 16S rRNA m(7)G-527 methyltransferase [Geobacter metallireducens
GS-15]
Length = 220
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
K F KW++KINL + +T + ++H DSL + + +DLGSGGGFP I
Sbjct: 27 KFALFAAELRKWNRKINLTAITTEREIALKHFVDSLSLCRAVGKGGKLLDLGSGGGFPVI 86
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMI 139
+I E V +++ KK F R++ Q ARG+ A R
Sbjct: 87 PFAILHPKSE---VVSVDAVEKKIIFQRHMGRLLGLSCFQSIHARGEELAGRFA------ 137
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D I +RA +D+ T + + P L
Sbjct: 138 GHFDWIVSRAFSDIPTFVRMALPLL 162
>gi|330505866|ref|YP_004382735.1| 16S rRNA methyltransferase GidB [Pseudomonas mendocina NK-01]
gi|328920152|gb|AEB60983.1| 16S rRNA methyltransferase GidB [Pseudomonas mendocina NK-01]
Length = 214
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
+S + E+L + L +KW+K NL + ++ RH+ DSL V + W+D+G
Sbjct: 22 LSAQQQEQLLAYLGLLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAERGDNWLDVG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQM 138
SGGG PG+ +I L++S KK FL V ++ A +V R+ EA +
Sbjct: 82 SGGGMPGVPLAIMFPERR---FTLLDSNGKKTRFLVQVKLELKLANLEVVHNRV-EAYRP 137
Query: 139 ITTCDVISARALADLD 154
D IS+RA + L+
Sbjct: 138 EQPFDGISSRAFSSLE 153
>gi|320335881|ref|YP_004172592.1| glucose inhibited division protein [Deinococcus maricopensis DSM
21211]
gi|319757170|gb|ADV68927.1| glucose inhibited division protein [Deinococcus maricopensis DSM
21211]
Length = 185
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L +++ ++L + + D W RH +++ P + +D+GSGGG PGI+ +
Sbjct: 6 YEALVRQYAPALDLFGPAVLRD-WARHEATAMKYAARLPAGAHLLDVGSGGGLPGIVIAR 64
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDVISARAL 150
+ + V L E + ++A+FL+ V + VFA +++ + +SA+A+
Sbjct: 65 ERPDVH---VTLCERRERRATFLKLAVARLGLTNADVFAGDVRD---WRGQTNWVSAQAV 118
Query: 151 ADLDTLL 157
AD+D L+
Sbjct: 119 ADVDDLI 125
>gi|306820324|ref|ZP_07453963.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551653|gb|EFM39605.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 237
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGGG 83
EK + + L +++K+NL + + +++ + +H DSL + + L SI ID+G+G G
Sbjct: 23 EKFDIYTQNLLSYNEKVNLTAITNIDEIYEKHYLDSLSILKYVHLEQNSSI-IDVGTGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQMIT-- 140
FP I I I + +++S K+ FL ++ K + + R ++ Q
Sbjct: 82 FPSIPMKIFREDIN---LCMLDSLAKRVVFLEDMISKLSLKKSTALHARAEDLAQKKDYR 138
Query: 141 -TCDVISARALADLDTLLEYSFPWL 164
D +RA+A+L TL EY P++
Sbjct: 139 ENFDYAVSRAVANLSTLCEYCIPFV 163
>gi|269958142|ref|YP_003327931.1| methyltransferase GidB [Xylanimonas cellulosilytica DSM 15894]
gi|269306823|gb|ACZ32373.1| methyltransferase GidB [Xylanimonas cellulosilytica DSM 15894]
Length = 242
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 12 ANYLLNTYNVSRETL----EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
A+ L V RE L + + F L + + L+ V W RH+ +S V
Sbjct: 34 ADRTLGESAVVREHLGEAYDDVAGFGELLREQGELRGLIGPREVSRLWERHLLNSAAVVP 93
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------T 121
P +D+GSG G PGI+ ++ +++ V L+E ++ ++L VV++
Sbjct: 94 YLPETGTLVDIGSGAGLPGIVVAMMRLNLD---VVLVEPMERRTTWLDEVVERFGLTNVD 150
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RG+ E DV+++RA+A+L L S P L +
Sbjct: 151 VRRGRA------EEYHGAFEADVVTSRAVANLAKLARMSLPLLRR 189
>gi|303256378|ref|ZP_07342392.1| 16S rRNA methyltransferase GidB [Burkholderiales bacterium 1_1_47]
gi|331001496|ref|ZP_08325114.1| 16S rRNA methyltransferase GidB [Parasutterella excrementihominis
YIT 11859]
gi|302859869|gb|EFL82946.1| 16S rRNA methyltransferase GidB [Burkholderiales bacterium 1_1_47]
gi|329568225|gb|EGG50042.1| 16S rRNA methyltransferase GidB [Parasutterella excrementihominis
YIT 11859]
Length = 214
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------ 75
E + KL F L LKW+K NL + D +H+ DSL L PY ++
Sbjct: 20 GEEEVSKLISFSELLLKWNKVYNLTAIRDEGDVIRKHLLDSL---TLLPYFKLYGSEVGC 76
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVFACRI 132
+D+G GGG P I SI L + NLI++ NKK +F+R V+Q F R+
Sbjct: 77 RTLDVGCGGGLPAIPLSIFLKDFD---FNLIDTVNKKITFVRQAVIQLKLPNVNAFNERV 133
Query: 133 QEAPQMITTCDVISARA---LADLDTLLEY 159
+ + ++IS RA LA TL E+
Sbjct: 134 ENF-HPLKPFNLISCRAFSSLASFVTLTEH 162
>gi|284049395|ref|YP_003399734.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
gi|283953616|gb|ADB48419.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
Length = 237
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+A + +S + L++ + L L+ +K +NL + + E+ ++H+ DSL V+
Sbjct: 7 LKAAGEAAGFTLSEKQLDQFTRYADLLLETNKSLNLTAITDPEEVAVKHMVDSLLVYDPE 66
Query: 70 PYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ + +D+G+G GFPG+ I + V LI+S K+ +FL VV K G+V
Sbjct: 67 RFHNHTIVDVGTGAGFPGLPLKIYDPGMR---VTLIDSLQKRLNFLEQVV-KDLGLGQVR 122
Query: 129 A--CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
R ++A P + DV ARA+A L L EY P +
Sbjct: 123 CTHARAEDAGKDPALREKFDVAVARAVAALPVLAEYCLPLV 163
>gi|332881974|ref|ZP_08449615.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332680100|gb|EGJ53056.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 206
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 15 LLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
++N Y +S E ++ ++ +W+ KIN++S + DF+ RHV SL + + +
Sbjct: 3 IINKYFPQLSEEQQQQFAQLKPIYEEWNAKINVISRKDMSDFYERHVLHSLAIAKRINFC 62
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G+GGGFPGI ++ L++S KK ++ VV T V A
Sbjct: 63 KGTDILDVGTGGGFPGIPLAVLFPECN---FTLVDSIGKKIKVVQEVVN-TLELKNVTAM 118
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+I+ A ++ + D + +RA+ + + PW+ K
Sbjct: 119 QIR-AEELKGSYDFVVSRAVTQMQDFV----PWVKGK 150
>gi|262277799|ref|ZP_06055592.1| 16S rRNA methyltransferase GidB [alpha proteobacterium HIMB114]
gi|262224902|gb|EEY75361.1| 16S rRNA methyltransferase GidB [alpha proteobacterium HIMB114]
Length = 205
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
++R+NY + VSRETL K+ ++ L+ ++K++L+S ST ++ RH D ++ +
Sbjct: 1 MIRSNYFDKS--VSRETLGKISKYHEFLLENNQKLSLISKSTEKEAIERHYADCAQIIKY 58
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSG G PGII I +L+E KK++FL+ K
Sbjct: 59 FDKTDKSVLDIGSGAGLPGIILDIIKKDHNLNFSTHLVEKSPKKSNFLKKANSFLDLDIK 118
Query: 127 VFACRIQE 134
+ C +++
Sbjct: 119 IHNCDVKQ 126
>gi|124516566|gb|EAY58074.1| putative glucose-inhibited division protein B [Leptospirillum
rubarum]
Length = 210
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPY 71
+ N ++ ET+ +L + + W++ I L D V + L + F L
Sbjct: 10 VFNRLHLGSETINRLSEYVEILASWNQHIRLSGYREKTDIRQHLVWEPLLAAQYFGLASS 69
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--A 129
+D GSG G PGII SI + V+L+E K KK SFL YV+ + F
Sbjct: 70 LCSIVDFGSGNGSPGIIFSILYPHLH---VSLVERKQKKLSFLSYVISRLKLENATFYDN 126
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R A Q ++C I +A++ LE S P
Sbjct: 127 IRTALAAQKTSSCTEIWMKAISMQSLFLELSRP 159
>gi|300870717|ref|YP_003785588.1| methyltransferase GidB [Brachyspira pilosicoli 95/1000]
gi|300688416|gb|ADK31087.1| Methyltransferase, gidB (glucose- inhibited division protein B)
[Brachyspira pilosicoli 95/1000]
Length = 209
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLGSGGGFPGIITSIQL 93
L + ++K IN+ + ++ F H+ DSL + Y +I ID+GSG G P I +I
Sbjct: 34 LVMDYNKNINITGAKDIQTFLDEHILDSLLALDVFRDYDNI-IDVGSGAGVPSIPLAIMY 92
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI----TTCDVISARA 149
+ + L ESKNKK+ FL A+ K+ I A + + D I++RA
Sbjct: 93 NDKK---FTLCESKNKKSDFL------IIAKEKLHLTNINVASKNVYELKEKYDTITSRA 143
Query: 150 LADLDTLL 157
+D+ TL+
Sbjct: 144 FSDIKTLI 151
>gi|238783014|ref|ZP_04627041.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
bercovieri ATCC 43970]
gi|238716015|gb|EEQ08000.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
bercovieri ATCC 43970]
Length = 206
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+++ N LLN ++ +KL+ + L KW+K NL S + +RH+ DS+ V
Sbjct: 2 LIKLNSLLNAADIELPDQQKLQLIGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VV 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------V 118
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 61 NPHLQGRRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLSNI 117
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ +R + FA D + +RA A L +L +
Sbjct: 118 EPVQSRVEEFAAN--------PPFDGVISRAFASLQDMLSW 150
>gi|119718912|ref|YP_925877.1| methyltransferase GidB [Nocardioides sp. JS614]
gi|189045870|sp|A1SQV5|RSMG_NOCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119539573|gb|ABL84190.1| 16S rRNA m(7)G-527 methyltransferase [Nocardioides sp. JS614]
Length = 250
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 18 TYNVSRET---------------LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
T +VSRET L E F L L+ W RH+ +
Sbjct: 2 TDDVSRETPSVPDVARRVFASDRLSLAERFVELLAGDGVVRGLIGPRETPRLWDRHLLNC 61
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ Q P + DLGSG G PG++ +I + V L+E ++ +FL VV +
Sbjct: 62 ALLAQQVPLEATVADLGSGAGLPGVVLAIARPDLR---VTLVEPLLRRTTFLEEVVAELG 118
Query: 123 -ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R +V R EA V+++RALA LD LL +S P
Sbjct: 119 LDRVEVLRAR-AEALHGDRRFAVVTSRALAPLDRLLGWSMP 158
>gi|237749325|ref|ZP_04579805.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes OXCC13]
gi|229380687|gb|EEO30778.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes OXCC13]
Length = 220
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ + ++KL + L KW+ NL + + H+ DSL V P +D+GS
Sbjct: 29 LTNDQVKKLLDYLVLLDKWNSTYNLTAVRNPQAMLTYHLLDSLAVVPYLPETRKLLDVGS 88
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMI 139
GGG PG++ SI ++ V++I+ +KK +FL V ++ V+ R++E ++
Sbjct: 89 GGGLPGLVLSIVYPDMK---VSMIDIVHKKTAFLNQVKIELGLDNVTVYTGRVEEL-EVE 144
Query: 140 TTCDVISARALADLDTLLEYS 160
D I +RA A L + S
Sbjct: 145 EPFDGIISRAFASLHDFVSLS 165
>gi|308234066|ref|ZP_07664803.1| methyltransferase GidB [Atopobium vaginae DSM 15829]
Length = 281
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFW---IRHVEDSL------R 64
YL + + + R T+ + + Y F + + + + + D W + H DSL +
Sbjct: 50 YLADAFGI-RITVSEADVLYKHFCSMREYNKITNLTRITDTWSALVLHYLDSLLNILVMQ 108
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
++ +DLG+G GFPGI SI+L LV L +S KK FL + + +
Sbjct: 109 NLNINLQTQTILDLGTGAGFPGIPLSIKLPK---KLV-LCDSVGKKTKFLSHYIAENRID 164
Query: 125 GKVFA--CRIQE-APQMITTCDVISARALADLDTLLEYSFPWL 164
G ++ R++E +PQ +I RA+A L LLEY+ P L
Sbjct: 165 GPIYIENKRVEELSPQYDHQFTLIVTRAVAQLSILLEYASPLL 207
>gi|312128797|ref|YP_003993671.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
gi|311778816|gb|ADQ08302.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
Length = 238
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGGFPGIIT 89
L L+ ++ NL + E+F I+H+ DSL + + + + ID+GSG G PG+
Sbjct: 29 LVLEKNRLFNLTAIENEEEFVIKHIADSLSLLKFIEEENTNQNPVAIDIGSGFGAPGLFV 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCDVI 145
I + S+ + L +S KK F+ + G C E + D +
Sbjct: 89 KIAMPSLN---IFLNDSNKKKCKFMVDAKESLGISGVNVVCERAEVLGRKEEFREKFDFV 145
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+ L+ L EY+ P L
Sbjct: 146 FARAVDRLNVLCEYALPLL 164
>gi|120434758|ref|YP_860445.1| 16S rRNA methyltransferase GidB [Gramella forsetii KT0803]
gi|189039397|sp|A0LYD2|RSMG_GRAFK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117576908|emb|CAL65377.1| glucose inhibited division protein B [Gramella forsetii KT0803]
Length = 211
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ + + K E L+ W+ KIN+VS +++ ++RH+ SL + ++ + S +D+
Sbjct: 13 LTDDQISKFEKLEELYKDWNLKINVVSRKDIDELYLRHILHSLGIVKVQSFNPGSKILDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+GGGFPGI +I +L++S KK + V + F R++E
Sbjct: 73 GTGGGFPGIPLAIMHPE---SAFHLVDSIGKKIKVVDEVSEGLGLENVTSFNQRVEE--- 126
Query: 138 MITTCDVISARALADLDTLLEY 159
+ D I +RA+A + T + +
Sbjct: 127 LNGNYDFIVSRAVAVMPTFVRW 148
>gi|261491716|ref|ZP_05988296.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495534|ref|ZP_05991981.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308868|gb|EEY10124.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261312555|gb|EEY13678.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 204
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N++ + E+L F L KW+K NL S ++ ++H+ DSL V H +ID+G
Sbjct: 15 NLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSL-VVSRHLQGETFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I ++ + V L++S K+ +F++ +++ + R++E +
Sbjct: 74 TGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNALRELGIKNVTPVQSRVEEYTE- 129
Query: 139 ITTCDVISARALADLDTLLEYSF 161
+ D + +RA A L+ ++++ +
Sbjct: 130 -SQFDGVLSRAFASLNDMIDWCY 151
>gi|254237762|ref|ZP_04931085.1| glucose inhibited division protein B [Pseudomonas aeruginosa C3719]
gi|126169693|gb|EAZ55204.1| glucose inhibited division protein B [Pseudomonas aeruginosa C3719]
Length = 214
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L +KW+K NL + ++ RH+ DSL + W+D+GSGGG PG+
Sbjct: 30 QLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGGNWLDVGSGGGMPGV 89
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVIS 146
+I + L++S KK FL V ++ A +V R+ EA + + D I
Sbjct: 90 PLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRV-EAFRPESPFDGIV 145
Query: 147 ARALADLDTLLEYS 160
+RA + L+ ++
Sbjct: 146 SRAFSSLEDFANWT 159
>gi|254360967|ref|ZP_04977113.1| glucose inhibited division protein B [Mannheimia haemolytica
PHL213]
gi|153092446|gb|EDN73509.1| glucose inhibited division protein B [Mannheimia haemolytica
PHL213]
Length = 204
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N++ + E+L F L KW+K NL S ++ ++H+ DSL V H +ID+G
Sbjct: 15 NLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSL-VVSRHLQGETFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I ++ + V L++S K+ +F++ +++ + R++E +
Sbjct: 74 TGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNALRELGIKNVTPVQSRVEEYTE- 129
Query: 139 ITTCDVISARALADLDTLLEYSF 161
+ D + +RA A L+ ++++ +
Sbjct: 130 -SQFDGVLSRAFASLNDMIDWCY 151
>gi|49078966|gb|AAT49839.1| PA5564 [synthetic construct]
Length = 215
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L +KW+K NL + ++ RH+ DSL + W+D+GSGGG PG+
Sbjct: 30 QLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGSGGGMPGV 89
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVIS 146
+I + L++S KK FL V ++ A +V R+ EA + + D I
Sbjct: 90 PLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRV-EAFRPESPFDGIV 145
Query: 147 ARALADLDTLLEYS 160
+RA + L+ ++
Sbjct: 146 SRAFSSLEDFANWT 159
>gi|332705995|ref|ZP_08426068.1| 16S rRNA m(7)G-527 methyltransferase [Lyngbya majuscula 3L]
gi|332355255|gb|EGJ34722.1| 16S rRNA m(7)G-527 methyltransferase [Lyngbya majuscula 3L]
Length = 248
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--- 75
+ + E + + Y L ++++NL + E+FW +H+ DSL L P IW
Sbjct: 23 WQPAPEQQQLFQKLYEGILSGNRQLNLTRITAPEEFWEKHLWDSL--VGLAP---IWQSI 77
Query: 76 ------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAA 123
ID+G+G GFPG+ +I + + L++S KK +FL+ ++ + T
Sbjct: 78 TPGQRIIDIGTGAGFPGLPVAIAFPNTA---ITLLDSTRKKITFLQTLIPQLEINNVTTL 134
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G+ A I + Q + D+ RA++ EY+ P L Q
Sbjct: 135 VGRAEA--IGQKQQHRHSYDIALVRAVSAPSVCAEYALPLLKQ 175
>gi|313111485|ref|ZP_07797286.1| glucose inhibited division protein B [Pseudomonas aeruginosa 39016]
gi|310883788|gb|EFQ42382.1| glucose inhibited division protein B [Pseudomonas aeruginosa 39016]
Length = 214
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L +KW+K NL + ++ RH+ DSL + W+D+GSGGG PG+
Sbjct: 30 QLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGSGGGMPGV 89
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVIS 146
+I + L++S KK FL V ++ A +V R+ EA + + D I
Sbjct: 90 PLAILFPQKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRV-EAFRPESPFDGIV 145
Query: 147 ARALADLDTLLEYS 160
+RA + L+ ++
Sbjct: 146 SRAFSSLEDFANWT 159
>gi|328943463|ref|ZP_08240928.1| glucose inhibited division protein B [Atopobium vaginae DSM 15829]
gi|327491432|gb|EGF23206.1| glucose inhibited division protein B [Atopobium vaginae DSM 15829]
Length = 284
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFW---IRHVEDSL------R 64
YL + + + R T+ + + Y F + + + + + D W + H DSL +
Sbjct: 53 YLADAFGI-RITVSEADVLYKHFCSMREYNKITNLTRITDTWSALVLHYLDSLLNILVMQ 111
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
++ +DLG+G GFPGI SI+L LV L +S KK FL + + +
Sbjct: 112 NLNINLQTQTILDLGTGAGFPGIPLSIKLPK---KLV-LCDSVGKKTKFLSHYIAENRID 167
Query: 125 GKVFA--CRIQE-APQMITTCDVISARALADLDTLLEYSFPWL 164
G ++ R++E +PQ +I RA+A L LLEY+ P L
Sbjct: 168 GPIYIENKRVEELSPQYDHQFTLIVTRAVAQLSILLEYASPLL 210
>gi|116053715|ref|YP_794042.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa UCBPP-PA14]
gi|122256265|sp|Q02DE4|RSMG_PSEAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115588936|gb|ABJ14951.1| glucose inhibited division protein B [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 214
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L +KW+K NL + ++ RH+ DSL + W+D+GSGGG PG+
Sbjct: 30 QLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGSGGGMPGV 89
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVIS 146
+I + L++S KK FL V ++ A +V R+ EA + + D I
Sbjct: 90 PLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRV-EAFRPESPFDGIV 145
Query: 147 ARALADLDTLLEYS 160
+RA + L+ ++
Sbjct: 146 SRAFSSLEDFANWT 159
>gi|104784444|ref|YP_610942.1| 16S rRNA methyltransferase GidB [Pseudomonas entomophila L48]
gi|122401170|sp|Q1I2H7|RSMG_PSEE4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|95113431|emb|CAK18159.1| glucose-inhibited division protein B [Pseudomonas entomophila L48]
Length = 216
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSS 95
+KW+K NL + ++ RH+ DSL V +H W+D+GSGGG PGI +I
Sbjct: 40 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVMPFIHNDTQRWLDVGSGGGMPGIPLAILHPH 99
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
+ V +++S KK FL V + V R++E C +IS RA + ++
Sbjct: 100 KQ---VTVLDSNGKKTRFLTQVKMELKLDNLTVIHSRVEEVQPEQPFCGIIS-RAFSSME 155
Query: 155 TLLEYS 160
++
Sbjct: 156 NFTNWT 161
>gi|294501985|ref|YP_003565685.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
gi|294351922|gb|ADE72251.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
Length = 238
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 21/160 (13%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S + L + E +Y + ++W++K+NL + + + + +H DS+ + I D
Sbjct: 16 SLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSISAAFFQDFTEIESMCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFA 129
+G+G GFP I I + V +++S K+ +FL ++V + R + F
Sbjct: 76 VGAGAGFPSIPIKICFPHLH---VTIVDSLQKRITFLMHLVNELELDNVTLCHDRAETFG 132
Query: 130 CR--IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ I+E + D+++ARA+A + L E+ P + ++
Sbjct: 133 KKETIRE------SFDLVTARAVARISVLNEFCLPLVKER 166
>gi|239637281|ref|ZP_04678268.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
gi|239597118|gb|EEQ79628.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
Length = 239
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 24/161 (14%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L +N+ S E+ + +Y L ++W++K+NL S + + +++H DS+ PS
Sbjct: 10 LKEHNIELSNTQKEQFQTYYQLLVEWNEKMNLTSITDEHEVYLKHFYDSIT-------PS 62
Query: 74 IW---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 63 FYYDFKGSLSICDVGAGAGFPSIPLKIIFPELK---VTIVDSLNKRIQFLNHLADALGLQ 119
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFP 162
F E + D+++ARA+A L L E P
Sbjct: 120 DVSFVHDRAETFGKGDYRESYDIVTARAVARLTVLSELCLP 160
>gi|323487694|ref|ZP_08092952.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
gi|323398428|gb|EGA91216.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
Length = 237
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLH-PYPSIWIDLGSGGG 83
LE+ ++ ++W+ K+NL + + +++H DS+ F L P D+G+G G
Sbjct: 22 LEQFRIYHKELVEWNDKMNLTAITEQTTVYLKHFYDSITAAFYLDFTKPMNICDVGAGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEA 135
FP I I IE V +++S NK+ FL+++ VQ +R + F
Sbjct: 82 FPSIPLKICFPHIE---VTIVDSLNKRIQFLQHLSGELGLTKVQFVHSRAEDFGQSSHRE 138
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
+ DV++ARA+A L L E P +
Sbjct: 139 -----SYDVVTARAVARLSVLAELCVPLV 162
>gi|15600757|ref|NP_254251.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PAO1]
gi|107104665|ref|ZP_01368583.1| hypothetical protein PaerPA_01005744 [Pseudomonas aeruginosa PACS2]
gi|218894667|ref|YP_002443537.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa LESB58]
gi|254243109|ref|ZP_04936431.1| glucose inhibited division protein B [Pseudomonas aeruginosa 2192]
gi|296392431|ref|ZP_06881906.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PAb1]
gi|20177903|sp|Q9HT10|RSMG_PSEAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725362|sp|B7V7A1|RSMG_PSEA8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|9951905|gb|AAG08949.1|AE004968_3 glucose inhibited division protein B [Pseudomonas aeruginosa PAO1]
gi|126196487|gb|EAZ60550.1| glucose inhibited division protein B [Pseudomonas aeruginosa 2192]
gi|218774896|emb|CAW30714.1| glucose inhibited division protein B [Pseudomonas aeruginosa
LESB58]
Length = 214
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L +KW+K NL + ++ RH+ DSL + W+D+GSGGG PG+
Sbjct: 30 QLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGSGGGMPGV 89
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVIS 146
+I + L++S KK FL V ++ A +V R+ EA + + D I
Sbjct: 90 PLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRV-EAFRPESPFDGIV 145
Query: 147 ARALADLD 154
+RA + L+
Sbjct: 146 SRAFSSLE 153
>gi|330997039|ref|ZP_08320901.1| 16S rRNA methyltransferase GidB [Paraprevotella xylaniphila YIT
11841]
gi|329571537|gb|EGG53219.1| 16S rRNA methyltransferase GidB [Paraprevotella xylaniphila YIT
11841]
Length = 206
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
+S + E+ + L+ W+ KIN++S +++ + HV SL + + + S +DL
Sbjct: 11 LSEKQTEQFQQLDALYHDWNAKINVISRKDIDNLYEHHVLHSLGIAEFTRFKSGTEIMDL 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ 137
G+GGGFPGI +I +L++S KK V ++ + F CR +E
Sbjct: 71 GTGGGFPGIPLAIMFPDCH---FHLVDSIGKKIKVCMEVARELGLKNVTFRHCRAEEEKA 127
Query: 138 MITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 128 KF---DFVVSRAVMPLADLVK 145
>gi|329955196|ref|ZP_08296153.1| 16S rRNA methyltransferase GidB [Bacteroides clarus YIT 12056]
gi|328526195|gb|EGF53214.1| 16S rRNA methyltransferase GidB [Bacteroides clarus YIT 12056]
Length = 206
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
+++ E + Y L+ W+ KIN++S + + + HV SL +V + P I +
Sbjct: 10 DLTEEQKGQFAALYNLYTDWNSKINVISRKDIGNLYEHHVLHSLGIAKVIRFAPGTKI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
DLG+GGGFPGI +I ++ LV+ I K +R + + G K R A
Sbjct: 69 DLGTGGGFPGIPLAILFPEVQFHLVDSIGKK------VRVATEVAGSIGLKNVTTRHARA 122
Query: 136 PQMITTCDVISARALADLDTLLE 158
+ D + +RA+ L LL+
Sbjct: 123 EEEKQLFDFVVSRAVMPLTDLLK 145
>gi|66770427|ref|YP_245189.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. 8004]
gi|77747974|ref|NP_639380.2| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|23821585|sp|Q8P3N0|RSMG_XANCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81303626|sp|Q4UP54|RSMG_XANC8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|66575759|gb|AAY51169.1| glucose inhibited division protein B [Xanthomonas campestris pv.
campestris str. 8004]
Length = 212
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 34 YLTLLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIVSGTLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ A A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEAVDEPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|299820856|ref|ZP_07052745.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
gi|299817877|gb|EFI85112.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
Length = 238
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDL 78
+S + L++ E ++ + ++W++K+NL + + E+ +++H DS+ + + D+
Sbjct: 17 LSEKQLQQFEDYFHMLVEWNEKMNLTAITNKEEVYLKHFYDSISAAFYVDFENQASLCDI 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--- 134
G+G GFP I I ++ +++++S K+ +FL + +K + F R ++
Sbjct: 77 GAGAGFPSIPIKICFPHLK---ISIVDSLQKRITFLNSLAEKLDLTDVQFFHSRAEDFGK 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E P +
Sbjct: 134 NKDFRASYDYVTARAVARMSVLAELCLPLV 163
>gi|90962568|ref|YP_536484.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius UCC118]
gi|122448467|sp|Q1WRS8|RSMG_LACS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|90821762|gb|ABE00401.1| Methyltransferase [Lactobacillus salivarius UCC118]
Length = 241
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSIW 75
N++ E +++ E +Y ++ +K +NL + + + +++H DS L V L
Sbjct: 16 NLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTEELSL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKV 127
D+G+G GFP + I ++ + +++S NK+ FL+ + QK AR +
Sbjct: 76 CDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKLNLQDVHFHHARAEE 132
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
F + + D+++ARA+A + L E P
Sbjct: 133 FGGKRSVHRERY---DLVTARAVARMSVLSELCLPL 165
>gi|328951744|ref|YP_004369079.1| Ribosomal RNA small subunit methyltransferase G [Marinithermus
hydrothermalis DSM 14884]
gi|328452068|gb|AEB12969.1| Ribosomal RNA small subunit methyltransferase G [Marinithermus
hydrothermalis DSM 14884]
Length = 182
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+LE + L ++ + ++L S +E+ W H+E +L + P+ +D+GSGGG PGI
Sbjct: 5 RLEAYVELLRRYGQTLDLASPRVLENPWP-HLEAALAYAEPIPHGEAVLDVGSGGGLPGI 63
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+I +E + L E + ++A+FL V
Sbjct: 64 PLAIARPDLE---ITLAEVRKRRAAFLELAVH 92
>gi|300215180|gb|ADJ79596.1| Ribosomal RNA small subunit methyltransferase G (16S ribosomal RNA
7-methylguanosine methyltransferase) (16S ribosomal RNA
m7G methyltransferase) [Lactobacillus salivarius CECT
5713]
Length = 241
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSIW 75
N++ E +++ E +Y ++ +K +NL + + + +++H DS L V L
Sbjct: 16 NLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKNLQTEELSL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKV 127
D+G+G GFP + I ++ + +++S NK+ FL+ + QK AR +
Sbjct: 76 CDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKLNLQDVHFHHARAEE 132
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
F + + D+++ARA+A + L E P
Sbjct: 133 FGGKRSVHRERY---DLVTARAVARMSVLSELCLPL 165
>gi|303230681|ref|ZP_07317431.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
gi|302514736|gb|EFL56728.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
Length = 250
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 8/140 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLGSGGGFPGIIT 89
+Y ++ +K +NL + +++ ++H+ DSL + ++ S ID+G+G GFPGI
Sbjct: 41 YYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSKIIKSGSSIIDVGTGAGFPGIPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMI--TTCDVIS 146
+I ++ V L +S K+ +FL V+ + K R ++ + D+ +
Sbjct: 101 AIYDRTLH---VTLFDSLKKRLTFLETVIDELQLTNCKTLHGRAEDLSHQDYRESFDIAT 157
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L LLE++ P++ Q
Sbjct: 158 SRAVARLPILLEWTVPYVKQ 177
>gi|189040868|sp|B0RYS0|RSMG_XANCB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 34 YLTLLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIVSGTLADLGTGPGLPGIPL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I ++ V L+ES KKA F+R ++ A A EA D ++ARA
Sbjct: 91 AITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEAVDEPAAYDHLTARA 147
Query: 150 LADLDTL 156
LDTL
Sbjct: 148 ---LDTL 151
>gi|257065513|ref|YP_003145185.1| glucose-inhibited division protein B [Slackia heliotrinireducens
DSM 20476]
gi|256793166|gb|ACV23836.1| glucose-inhibited division protein B [Slackia heliotrinireducens
DSM 20476]
Length = 237
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYP-SIWIDLGSGGGFPGIITSIQLSS 95
K +K +NL T E I H+EDSL ++ P + D+G+GGGFPG+ +I +
Sbjct: 33 KVNKTMNLTRIDTYESALILHIEDSLAGLPFINDAPQGRYADIGTGGGFPGVPVAIMTNR 92
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQE-APQMITTCDVISARALAD 152
L++S KK L VV + + R+++ A M V++ARA++
Sbjct: 93 D----TLLVDSVQKKVKALMGVVDGLGLNANIEGYPGRVEDLAKDMPGKFAVVTARAVSS 148
Query: 153 LDTLLEYSFPWL 164
L +LLE P L
Sbjct: 149 LASLLELVSPLL 160
>gi|86160771|ref|YP_467556.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-C]
gi|123497403|sp|Q2IHR2|RSMG_ANADE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85777282|gb|ABC84119.1| 16S rRNA m(7)G-527 methyltransferase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 215
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
LE + L W++K+NL + + + +H+ DSL + +D+GSG G PGI
Sbjct: 28 LERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLLPFVAGARTLLDVGSGAGLPGIP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM--ITTCDVIS 146
+ + V + KK +F++ V + R + A R + P+ + D +
Sbjct: 88 LACVRRDLS---VTCCDGVAKKIAFVKAVSAELDLRVRGVAVRAEGHPEREGLPRADAVV 144
Query: 147 ARALADLD 154
+RALAD D
Sbjct: 145 SRALADPD 152
>gi|23100944|ref|NP_694411.1| glucose-inhibited division protein B [Oceanobacillus iheyensis
HTE831]
gi|29336682|sp|Q8EKU4|RSMG_OCEIH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22779179|dbj|BAC15445.1| glucose-inhibited division protein B [Oceanobacillus iheyensis
HTE831]
Length = 238
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWI-D 77
N+S + E+ ++ ++W++K+NL + + E+ +++H D + H + I I D
Sbjct: 16 NLSEKQTEQFYIYFQELVEWNQKVNLTAITDQEEVYVKHFYDCVTAAFYHDFNQEISICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I ++ + +++S K+ +FL ++ K F A
Sbjct: 76 IGAGAGFPSIPLKIVFPQLK---ITIVDSLKKRITFLNHLATKLELSNVAFYHDRAENFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A + L E P +
Sbjct: 133 KNKTFRESFDIVTARAVARMSVLSELCLPLV 163
>gi|284097363|ref|ZP_06385487.1| Glucose inhibited division protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283831128|gb|EFC35114.1| Glucose inhibited division protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 219
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLG 79
+ T+EK ++ +KW++K NL E+ DSL VF SI +D+G
Sbjct: 24 QATVEKFVFYLQELMKWNEKTNLTGHKQEEEIIGNLFIDSLACTMVFSSDTACSI-LDIG 82
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA--- 135
SG GFPGI ++ + V L+E KK +FL +V+ + +V ACRI+E
Sbjct: 83 SGAGFPGIPMALVSPQQD---VTLLEPNLKKVAFLHHVIGSLGLKNVRVEACRIEECSKK 139
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P+ D + +AL D L Y P L +
Sbjct: 140 PEYDKKFDWVFMKAL-RFDVGLAYVTPILSE 169
>gi|152986230|ref|YP_001351677.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PA7]
gi|166224603|sp|A6VF42|RSMG_PSEA7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150961388|gb|ABR83413.1| methyltransferase GidB [Pseudomonas aeruginosa PA7]
Length = 214
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +L + L +KW+K NL + ++ RH+ DSL + W+D+GSGGG
Sbjct: 26 EKKHQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPHAEAGDNWLDVGSGGG 85
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTC 142
PG+ +I + L++S KK FL V ++ A V R+ EA + +
Sbjct: 86 MPGVPLAILFPERR---LTLLDSNGKKTRFLTQVKLELKLANLDVVHSRV-EAFRPESPF 141
Query: 143 DVISARALADLDTLLEYS 160
D I +RA + L+ ++
Sbjct: 142 DGIVSRAFSSLEDFANWT 159
>gi|33865160|ref|NP_896719.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8102]
gi|55976484|sp|Q7U8J1|RSMG_SYNPX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33638844|emb|CAE07141.1| putative glucose inhibited division protein B [Synechococcus sp. WH
8102]
Length = 248
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PYPS-IWIDLGSG 81
L +L+ L W+ ++NL +D+WI V DSL Q P+ S + ID+G+G
Sbjct: 28 LGQLKALQDLLRSWNSRVNLTRLVEGDDYWINQVFDSLWPLQTELRSPHQSRLAIDVGTG 87
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
GGFPG+ +I ++ G + L++S +K + ++ +V
Sbjct: 88 GGFPGLAVAI---AMPGARMTLLDSVGRKTAAVQAMV 121
>gi|165977090|ref|YP_001652683.1| 16S rRNA methyltransferase GidB [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150985|ref|YP_001969510.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303249897|ref|ZP_07336099.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307250949|ref|ZP_07532875.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307253321|ref|ZP_07535193.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307257736|ref|ZP_07539493.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307262143|ref|ZP_07543794.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307264342|ref|ZP_07545930.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|193806478|sp|B0BRY0|RSMG_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226795817|sp|B3H2Q1|RSMG_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|165877191|gb|ABY70239.1| glucose inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189916116|gb|ACE62368.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302650960|gb|EFL81114.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306856977|gb|EFM89107.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859185|gb|EFM91226.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863642|gb|EFM95568.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306868120|gb|EFM99945.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870294|gb|EFN02050.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 205
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N++ + E+L F L KW+K NL S ++ ++H+ DSL V + H + +ID+G
Sbjct: 15 NLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSLVVSE-HLQGNNFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I ++ + V L++S K+ +F++ +++ R++E +
Sbjct: 74 TGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNALRELGITNVTPVLSRVEEYKEQ 130
Query: 139 ITTCDVISARALADLDTLLEYSF 161
T D + +RA A L+ ++++ +
Sbjct: 131 --TFDGVLSRAFASLNDMVDWCY 151
>gi|194335474|ref|YP_002017268.1| methyltransferase GidB [Pelodictyon phaeoclathratiforme BU-1]
gi|226725360|sp|B4SC71|RSMG_PELPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194307951|gb|ACF42651.1| methyltransferase GidB [Pelodictyon phaeoclathratiforme BU-1]
Length = 228
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGG 82
TL++L + +W+ KINL+S I+H+ SL + H + +DLG+GG
Sbjct: 26 TLQQLARYGDCLERWNHKINLISRKEDAPVIIKHIFHSLLITLYHSFREGEDVLDLGTGG 85
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITT 141
G PGI S+ L+++ KK + + ++ + + R++E ++
Sbjct: 86 GLPGIPLSLLFPRTR---FLLVDATGKKIAACQAMITELGINNAIALHTRVEELKGVVF- 141
Query: 142 CDVISARALADLDTLLEYSFPWL 164
D + +R +A LD L YS P L
Sbjct: 142 -DTVLSRQVAPLDKLCSYSAPLL 163
>gi|152990107|ref|YP_001355829.1| 16S rRNA methyltransferase GidB [Nitratiruptor sp. SB155-2]
gi|189045869|sp|A6Q1W3|RSMG_NITSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151421968|dbj|BAF69472.1| glucose inhibited division protein B [Nitratiruptor sp. SB155-2]
Length = 181
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGG 83
T EKL F L+W+K NL S + E+ ++ED+L Q P +D+G+G G
Sbjct: 3 TEEKLNIFTQKLLEWNKIHNLTGSKSEEEVQ-ENIEDALFALQFLPDTIQNALDIGTGAG 61
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAARGKVFACRIQEAPQMITTC 142
FPG++ +I + + L E + K+ASFL Y+ + V+ R+++ +
Sbjct: 62 FPGLVLAIAMPKTQWILT---EPRQKRASFLHYMKSILNLSNVIVYKKRVEQIEAV--PM 116
Query: 143 DVISARALADLDTLLEYS 160
D+I++RA+ L++ S
Sbjct: 117 DLITSRAVMKTKDLIDLS 134
>gi|315223095|ref|ZP_07864963.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
gi|315187784|gb|EFU21531.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
Length = 238
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ-LHPYPSI-WIDLGSGGG 83
++ E ++ L ++W++ INL + + ++ +++H DS+ + Q L I +D+G+G G
Sbjct: 24 QQFERYFELLVEWNENINLTAITDKKEVYLKHFYDSIAPILQGLIDNKGIKLLDIGAGAG 83
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ FL ++ + + + R ++ Q
Sbjct: 84 FPSLPMKILYPELD---VTIIDSLNKRILFLNHLADELGLEKVHFYHGRAEDFAQDKDFR 140
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
DV++ARA+A + L E + P+L
Sbjct: 141 AQFDVVTARAVARMQVLAELTIPFL 165
>gi|302185833|ref|ZP_07262506.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
642]
Length = 211
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID+G
Sbjct: 20 DLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVSF-IEGTRWIDVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
SGGG PGI +I + V L++S KK F
Sbjct: 79 SGGGMPGIPMAILFPQCQ---VALLDSNGKKTRF 109
>gi|119358162|ref|YP_912806.1| 16S rRNA methyltransferase GidB [Chlorobium phaeobacteroides DSM
266]
gi|166224580|sp|A1BJ05|RSMG_CHLPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119355511|gb|ABL66382.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium phaeobacteroides
DSM 266]
Length = 222
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGF 84
EKL + L W+ KINL+S I+HV SL + H + S +DLG+GGG
Sbjct: 31 EKLVGYALLLEDWNNKINLISRKEDAPILIKHVFHSLLIGLFHQFSSSEKVLDLGTGGGL 90
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCD 143
PGI +I + L+++ KK + + +++ + V R++E M + D
Sbjct: 91 PGIPLAIAWPDTQ---FLLVDATGKKIAACQSMIKSLDIKNAVAVHSRVEELKGM--SFD 145
Query: 144 VISARALADLDTLLEYS 160
+ +R +A L+ L Y+
Sbjct: 146 TVLSRQVAQLEQLCSYA 162
>gi|299065187|emb|CBJ36353.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum CMR15]
Length = 224
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A + L++L + L KW++ NL + V D H+ DSL
Sbjct: 8 ADTRSELEAGARALGLPLEGVQLDRLLAYQVLLAKWNRVYNLTAIRDVGDMLTHHLLDSL 67
Query: 64 --------RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RV + P +D+GSGGG PGI +I I +V++++ KK +FL
Sbjct: 68 AAVPRIAERVRSVQPEAPRVLDVGSGGGLPGIPLAIACPDISVTMVDIVQ---KKTAFL 123
>gi|227891371|ref|ZP_04009176.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
gi|227866760|gb|EEJ74181.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
Length = 241
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSIW 75
N++ E +++ E +Y ++ +K +NL + + + +++H DS L V L
Sbjct: 16 NLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTEELSL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKV 127
D+G+G GFP + I ++ + +++S NK+ FL+ + QK AR +
Sbjct: 76 CDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKLNLQDVHFHHARAEE 132
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
F + + D+++ARA+A + L E P
Sbjct: 133 FGGKRSVHRERY---DLVTARAVARMSVLSELCLPL 165
>gi|187925873|ref|YP_001897515.1| 16S rRNA methyltransferase GidB [Burkholderia phytofirmans PsJN]
gi|187717067|gb|ACD18291.1| methyltransferase GidB [Burkholderia phytofirmans PsJN]
Length = 227
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPY-PSIWID 77
++S L+KL + L KW+ NL + I+H+ DSL + L P PS +D
Sbjct: 27 DLSDAQLDKLLDYVALLSKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLAPLGPSSVLD 86
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRI- 132
+GSGGG PGI+ +I LS V + + +KK +F Q A G V R+
Sbjct: 87 VGSGGGLPGIVLAIVLSEWT---VTVNDIVHKKTAFQ---AQAKAELGLANLSVVTGRVE 140
Query: 133 --QEAPQMITTCDVISARALADL 153
Q ++ DVI +RA A+L
Sbjct: 141 TLQPGAEVPAKFDVIVSRAFAEL 163
>gi|331017734|gb|EGH97790.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 211
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 20 DLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I ++L++S KK F
Sbjct: 77 VGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRF 109
>gi|303252045|ref|ZP_07338215.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248703|ref|ZP_07530716.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302649109|gb|EFL79295.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306854630|gb|EFM86820.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 205
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N++ + E+L F L KW+K NL S ++ ++H+ DSL V + H + +ID+G
Sbjct: 15 NLTDQQKEQLVDFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSLVVSE-HLQGNNFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I ++ + V L++S K+ +F++ +++ R++E +
Sbjct: 74 TGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNALRELGITNVTPVLSRVEEYKEQ 130
Query: 139 ITTCDVISARALADLDTLLEYSF 161
T D + +RA A L+ ++++ +
Sbjct: 131 --TFDGVLSRAFASLNDMVDWCY 151
>gi|301301113|ref|ZP_07207270.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851242|gb|EFK78969.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 241
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSIW 75
N++ E +++ E +Y ++ +K +NL + + + +++H DS L V L
Sbjct: 16 NLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLLALTVKDLQTEELSL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKV 127
D+G+G GFP + I ++ + +++S NK+ FL+ + QK AR +
Sbjct: 76 CDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKLNLQDVHFHHARAEE 132
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
F + + D+++ARA+A + L E P
Sbjct: 133 FGGKRSVHRERY---DLVTARAVARMSVLSELCLPL 165
>gi|225851139|ref|YP_002731373.1| 16S rRNA methyltransferase GidB [Persephonella marina EX-H1]
gi|225645613|gb|ACO03799.1| 16S rRNA methyltransferase GidB [Persephonella marina EX-H1]
Length = 208
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
C+ N I +S + L+K E + + KW++ NL S E+ +H DSL
Sbjct: 9 CEKNGIF----------LSDDQLKKFEIYLNMLSKWNRVYNLTSVRRKEEIITKHFFDSL 58
Query: 64 RVFQLHPYPSIWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ +L I + DLG+G GFPG+ I E + LIES KK FL +
Sbjct: 59 TLVKLFEKEGINVEGKKVADLGAGAGFPGVPVKIYYG--EKIDLYLIESVGKKCIFLEML 116
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
++ + KV R +E + D++ +RA +
Sbjct: 117 KKEISVDYKVICKRSEEVEERF---DIVLSRATGE 148
>gi|15896963|ref|NP_350312.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum ATCC
824]
gi|20177895|sp|Q97CW4|RSMG_CLOAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15026839|gb|AAK81652.1|AE007868_8 Glucose-inhibited division protein, GIDB
(S-adenosylmethionine-dependent methyltransferase)
[Clostridium acetobutylicum ATCC 824]
gi|325511140|gb|ADZ22776.1| glucose-inhibited division protein B [Clostridium acetobutylicum EA
2018]
Length = 239
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLG 79
+ E K + L +W+K +NL S E+ +H DS+++F+ ID+G
Sbjct: 19 TEEKYGKFMRYKELLQEWNKVMNLTSIVDDEEIVKKHFIDSIKIFECEHIVKAKRIIDVG 78
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFACR 131
+G GFPG+ +I IE V L++S K+ +FL V+++ R + F
Sbjct: 79 TGAGFPGLPIAIMNDDIE---VVLLDSLQKRVNFLNEVIKELNLKNISTVHGRAEDFGVD 135
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ DV +RA+A++ L E+ P+
Sbjct: 136 KDYREKF----DVAVSRAVANMAVLSEFCLPF 163
>gi|225025343|ref|ZP_03714535.1| hypothetical protein EIKCOROL_02241 [Eikenella corrodens ATCC
23834]
gi|224941897|gb|EEG23106.1| hypothetical protein EIKCOROL_02241 [Eikenella corrodens ATCC
23834]
Length = 209
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ NL + + RH+ DSL + +D+GSGGG PGI T+I ++
Sbjct: 35 KWNRTYNLTALRRNDQIISRHILDSLTLLPYVKEAKTLMDVGSGGGMPGIPTAICRPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRY-VVQKTAARGKVFACRIQEAPQMITTCDVISARALADL 153
+ L+++ KK +FL+ V++ + V A R++ DV+++RA A+L
Sbjct: 95 ---ITLLDANTKKTAFLQQTVIELGLSNVTVAAGRVETIYD--KKVDVVTSRAFAEL 146
>gi|325694167|gb|EGD36085.1| glucose inhibited division protein B [Streptococcus sanguinis
SK150]
Length = 237
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGGFPGII 88
++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G GFP +
Sbjct: 28 YFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAGFPSLP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MITTCDV 144
I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q D+
Sbjct: 88 MKIICPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRAEDFAQDKAFRAQFDL 144
Query: 145 ISARALADLDTLLEYSFPWL 164
++ARA+A + L E + P+L
Sbjct: 145 VTARAVARMQILSELTIPYL 164
>gi|294668221|ref|ZP_06733328.1| 16S rRNA methyltransferase GidB [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309929|gb|EFE51172.1| 16S rRNA methyltransferase GidB [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 209
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+ NL + + H+ DSL + S +D+GSGGG PGI +I ++
Sbjct: 35 KWNGTYNLTALRDEQTMISHHILDSLTLLPYIEQASTLMDVGSGGGMPGIPAAICRPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADL 153
+ L+++ KK +FLR V + V + R++E DV+++RA A+L
Sbjct: 95 ---ITLLDANTKKTTFLRQAVIELGLNNVTVASGRVEEMHD--KKVDVVTSRAFAEL 146
>gi|307246579|ref|ZP_07528650.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255564|ref|ZP_07537369.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307260015|ref|ZP_07541727.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852451|gb|EFM84685.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861413|gb|EFM93402.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865851|gb|EFM97727.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 205
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N++ + E+L F L KW+K NL S ++ ++H+ DSL V + H + +ID+G
Sbjct: 15 NLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSLVVSE-HLQGNNFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I ++ + V L++S K+ +F++ +++ R++E +
Sbjct: 74 TGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNALRELGITNVTPVLSRVEEYKEQ 130
Query: 139 ITTCDVISARALADLDTLLEYSF 161
T D + +RA A L+ ++++ +
Sbjct: 131 --TFDGVLSRAFASLNDMVDWCY 151
>gi|303228589|ref|ZP_07315416.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
gi|302516768|gb|EFL58683.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
Length = 249
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 16/144 (11%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------IDLGSGGGFP 85
+Y ++ +K +NL + +++ ++H+ DSL + P+I ID+G+G GFP
Sbjct: 41 YYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYD----PTIIKSGSSIIDVGTGAGFP 96
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMI--TTC 142
GI +I ++ V L +S K+ +FL V+ + K R ++ +
Sbjct: 97 GIPLAIYDRTLH---VTLFDSLKKRLTFLESVIDELQLTNCKTLHGRAEDLSHQDYRESF 153
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D+ ++RA+A L LLE++ P++ Q
Sbjct: 154 DIATSRAVARLPILLEWTVPYVKQ 177
>gi|332687257|ref|YP_004457031.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
gi|332371266|dbj|BAK22222.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
Length = 238
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPYPSIWIDLGSGGG 83
+++ + +Y L ++W++K+NL + E +++H D SL F D+G+G G
Sbjct: 22 MKQFDSYYKLLIEWNQKMNLTTILNKEAVYLKHFYDSISLAFFANFKGRHSLCDIGAGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEA 135
FP I I ++ + +I+S NK+ SFL +V + R +VF +
Sbjct: 82 FPSIPLKILFPDLQ---ITIIDSLNKRISFLTELVNQLEMDHVFLYHERAEVFG----QD 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
D ++ARA+A L+ L E P +
Sbjct: 135 STFRGQFDYVTARAVARLNVLSELCLPLV 163
>gi|295707336|ref|YP_003600411.1| glucose inhibited division protein GidB [Bacillus megaterium DSM
319]
gi|294804995|gb|ADF42061.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium DSM 319]
Length = 238
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 21/160 (13%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WID 77
++S + L + E +Y + ++W++K+NL + + + + +H DS+ + I D
Sbjct: 16 SLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSISAAFFQDFTEIESMCD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFA 129
+G+G GFP I I + V +++S K+ +FL ++V + R + F
Sbjct: 76 VGAGAGFPSIPIKICFPHLH---VTIVDSLQKRITFLTHLVNELELDNVTLCHDRAETFG 132
Query: 130 CR--IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ I+E + D+++ARA+A + L E+ P + ++
Sbjct: 133 KKETIRE------SFDLVTARAVARISVLNEFCLPLVKEQ 166
>gi|226941924|ref|YP_002796998.1| 16S rRNA methyltransferase GidB [Laribacter hongkongensis HLHK9]
gi|254766894|sp|C1D5H2|RSMG_LARHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226716851|gb|ACO75989.1| GidB [Laribacter hongkongensis HLHK9]
Length = 207
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L ++ L KW++ NL + HV DSL L I +D+GSGGG PGI
Sbjct: 26 LVHYVELLDKWNRVYNLTAVRETGRMLSYHVLDSLAALPLVAGQRI-LDVGSGGGMPGIP 84
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I + L+++ +KK +FL+ V + C EA Q DVI++R
Sbjct: 85 FAISQPDWS---LTLLDANHKKTTFLKQAVIELGLTNTEVVCERVEAFQPERKFDVITSR 141
Query: 149 ALADL 153
A +DL
Sbjct: 142 AFSDL 146
>gi|307720270|ref|YP_003891410.1| 16S rRNA m(7)G-527 methyltransferase [Sulfurimonas autotrophica DSM
16294]
gi|306978363|gb|ADN08398.1| 16S rRNA m(7)G-527 methyltransferase [Sulfurimonas autotrophica DSM
16294]
Length = 195
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++ + +K++ + KW+K NL + E + D++ P +D+G
Sbjct: 13 DLPNDFFQKVQKYKEHLFKWNKIHNLTGAKN-EQTLNEFIYDAVFPVSFLPKVDSLMDIG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQ 137
+G GFPG+I + L + + L+E K+ASFL+++ V R++E PQ
Sbjct: 72 TGAGFPGMILAFALPDTK---ITLVEPLTKRASFLQFIKADLGLENVSVVKKRVEEMEPQ 128
Query: 138 MITTCDVISARALADLDTLLEYS 160
M D+I++RA+ D LL S
Sbjct: 129 MF---DLITSRAVTDTKMLLNLS 148
>gi|294788313|ref|ZP_06753556.1| 16S rRNA methyltransferase GidB [Simonsiella muelleri ATCC 29453]
gi|294483744|gb|EFG31428.1| 16S rRNA methyltransferase GidB [Simonsiella muelleri ATCC 29453]
Length = 210
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+ NL + H+ DSL + +D+GSGGG PGI T+I +
Sbjct: 36 KWNSTYNLTALRDENTMISHHLLDSLTLLPYVANAQTLMDVGSGGGMPGIPTAICRPDLH 95
Query: 98 GGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALA 151
+ L++S KK +FL+ V + T A G+V A ++ DV+++RA A
Sbjct: 96 ---ITLLDSNTKKTTFLQQAVIELGLKNVTVASGRVEAMHDKK-------VDVVTSRAFA 145
Query: 152 DL 153
+L
Sbjct: 146 EL 147
>gi|313202485|ref|YP_004041143.1| methyltransferase gidb [Methylovorus sp. MP688]
gi|312441801|gb|ADQ85907.1| methyltransferase GidB [Methylovorus sp. MP688]
Length = 194
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 16/132 (12%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIWIDLGSGGG 83
L+Y L KW+K NL + ++ H+ DSL V P+ PS +D+GSG G
Sbjct: 2 LDYLALLQ-KWNKVHNLTAVRDPDEMVTLHLLDSLSVL---PHVQALSPSRLLDVGSGAG 57
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRI-QEAPQMITT 141
PGII ++ + ++ V I++ KKASF+R + A +V A R+ Q P
Sbjct: 58 LPGIILALCMPDLK---VTTIDAVQKKASFMRQAKAELGIANLEVIAGRVEQHRPS--QA 112
Query: 142 CDVISARALADL 153
D++ +RA +++
Sbjct: 113 YDIVISRAFSEI 124
>gi|298489531|ref|ZP_07007540.1| Methyltransferase gidB [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298155958|gb|EFH97069.1| Methyltransferase gidB [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 211
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 20 DLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I + V L++S KK F
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRF 109
>gi|217967937|ref|YP_002353443.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
gi|217337036|gb|ACK42829.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
Length = 240
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 16 LNTYNVSRETLEKLE-YFYFLFLK-WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+N N+ + L++ + Y Y+ LK W++KINL S E+ ++H DSL +
Sbjct: 13 VNELNLKLDPLQEEKFYLYYKALKEWNRKINLTSLEGEEEIILKHFVDSLACIIPIKDEN 72
Query: 74 IW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--- 128
I ID+G+G GFPGI I + + L+ES+ KK FL + +
Sbjct: 73 IEKIIDIGTGAGFPGIPLKIYNEKYK---LTLLESQKKKVLFLEEITKILKLSNVEIIWD 129
Query: 129 -ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + + P+ D+ AR +A +LEY+ P++
Sbjct: 130 RAENLGKNPKYRENFDLALARGVAKPHIVLEYAIPFV 166
>gi|21115310|gb|AAM43262.1| glucose inhibited division protein B [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 249
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 71 YLTLLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIVSGTLADLGTGPGLPGIPL 127
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+I ++ V L+ES KKA F+R ++ A
Sbjct: 128 AITRPQLQ---VTLVESNGKKARFMREALRHLA 157
>gi|32034341|ref|ZP_00134541.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209118|ref|YP_001054343.1| 16S rRNA methyltransferase GidB [Actinobacillus pleuropneumoniae
L20]
gi|166224341|sp|A3N2V2|RSMG_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126097910|gb|ABN74738.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 205
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N++ + E+L F L KW+K NL S ++ ++H+ DSL V + H + +ID+G
Sbjct: 15 NLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSLVVSE-HLQGNNFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I ++ + V L++S K+ +F++ +++ R++E +
Sbjct: 74 TGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNALRELGITNVTPVLSRVEEYKEQ 130
Query: 139 ITTCDVISARALADLDTLLEYSF 161
T D + +RA A L+ ++++ +
Sbjct: 131 --TFDGVLSRAFASLNDMVDWCY 151
>gi|323703265|ref|ZP_08114916.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
gi|323531730|gb|EGB21618.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
Length = 240
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQ 92
L ++ ++KINL + ++ I+H DSL +P+ +D+GSG GFPG+ I
Sbjct: 33 LIIEGNEKINLTAILEPKEVAIKHFVDSLTCLLAVSFPTGAKVLDIGSGAGFPGVPLKIY 92
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAPQMITTCDV 144
++ + L++S NK+ FL+ + K +R + F + P DV
Sbjct: 93 RPDLQ---ITLMDSLNKRILFLQDTINKLGLNNITAIHSRAEDFG----QQPANRENFDV 145
Query: 145 ISARALADLDTLLEYSFPWL 164
+ +RA+A L L EY P +
Sbjct: 146 VVSRAVARLVVLSEYCLPCV 165
>gi|332639018|ref|ZP_08417881.1| 16S rRNA methyltransferase GidB [Weissella cibaria KACC 11862]
Length = 239
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 18/137 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------WIDLGSGGGFPGIITSIQL 93
++ +NL + + ++ +++H DSL + YP++ ID+G+G GFP + I
Sbjct: 36 NEHMNLTAITERDEVYMKHFYDSLTLAWA--YPALQTEELHMIDVGAGAGFPSLPLKIAF 93
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-----APQMITTCDVISA 147
++ + +I++ NK+ +FLR +V++ G V R +E AP DV +A
Sbjct: 94 PQLQ---ITIIDALNKRINFLRDLVKELGLEGVTVEHARAEEFGNKNAPAR-EQYDVATA 149
Query: 148 RALADLDTLLEYSFPWL 164
RALA L+ L E + P++
Sbjct: 150 RALARLNILGELTLPFV 166
>gi|188993632|ref|YP_001905642.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. B100]
gi|167735392|emb|CAP53606.1| Methyltransferase GidB [Xanthomonas campestris pv. campestris]
Length = 314
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L ++W+K NL + + RH+ DSL + PY DLG+G G PGI
Sbjct: 136 YLTLLVRWNKTYNLTAVRDPREMVTRHLLDSL---AMQPYIVSGTLADLGTGPGLPGIPL 192
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+I ++ V L+ES KKA F+R ++ A
Sbjct: 193 AITRPQLQ---VTLVESNGKKARFMREALRHLA 222
>gi|257485606|ref|ZP_05639647.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 211
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 20 DLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I + V L++S KK F
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRF 109
>gi|311897301|dbj|BAJ29709.1| putative ribosomal RNA small subunit methyltransferase G
[Kitasatospora setae KM-6054]
Length = 260
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV + + +L P D+GSG G PGI ++ + V L
Sbjct: 48 GLIGPREVPRLWDRHVLNCAVLAELLPADVSLCDVGSGAGLPGIPVALARPDVS---VTL 104
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+E ++ +FL VV++ V R +E + DV++ARA+A LD L + P
Sbjct: 105 LEPLLRRTTFLEEVVRELGLENVTVLRGRAEETVGKL-AVDVVTARAVAPLDRLAGWGMP 163
Query: 163 WL 164
L
Sbjct: 164 LL 165
>gi|118602125|ref|YP_903340.1| methyltransferase GidB [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567064|gb|ABL01869.1| 16S rRNA m(7)G-527 methyltransferase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 190
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + KL + L +KW+K NL + T+E +H+ DSL V S+ +D+GSG G
Sbjct: 8 EQISKLMNYLKLIIKWNKSYNLSAIRTMEKGVYKHLLDSLSVIAYIKDKSL-LDVGSGAG 66
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PGI+ SI + LV ++++ KK F+++ + + V R+ E Q+
Sbjct: 67 LPGIVISIMRPEL---LVTVLDTVGKKCRFMQFAKTQLQLKNLNVIKNRV-ENYQIEFCF 122
Query: 143 DVISARALADLDTLLEYS 160
+ I +RA + ++ +L+ +
Sbjct: 123 EQIISRAFSKVEKILKLT 140
>gi|298372526|ref|ZP_06982516.1| 16S rRNA methyltransferase GidB [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275430|gb|EFI16981.1| 16S rRNA methyltransferase GidB [Bacteroidetes oral taxon 274 str.
F0058]
Length = 206
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L+ W+ KIN++S +E+ ++ HV SL ++ P +I ID+G+GGGFPGI +I
Sbjct: 25 LYADWNAKINVISRKDIENLYLHHVLHSLAIAKIIDFRPGTNI-IDVGTGGGFPGIPLAI 83
Query: 92 QLSSIEGGLVNLIESKNKKAS 112
L++ + K K AS
Sbjct: 84 MFPECRFCLLDSVGKKIKVAS 104
>gi|189426682|ref|YP_001953859.1| methyltransferase GidB [Geobacter lovleyi SZ]
gi|189422941|gb|ACD97339.1| methyltransferase GidB [Geobacter lovleyi SZ]
Length = 215
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L+W+KKINL + + ++ I+H+ DSL V +L P I +D+GSG GFP ++ +I
Sbjct: 32 LLRWNKKINLTAITGRDEMTIKHLIDSLHLVPELRPGDRI-LDVGSGAGFPALVLAIVRP 90
Query: 95 SIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDVIS 146
L+ I++ KK SF +++ ++ R ++ A D+++
Sbjct: 91 DC---LITSIDAVGKKISFQKHIGRLLKLTNLEPLHGRVELLAA------DRSGGFDLVT 141
Query: 147 ARALADLDTLLEYSFPWL 164
+RA + L+ +E + P +
Sbjct: 142 SRAFSSLELFVELAAPLV 159
>gi|78186097|ref|YP_374140.1| 16S rRNA methyltransferase GidB [Chlorobium luteolum DSM 273]
gi|123583570|sp|Q3B6D4|RSMG_PELLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78165999|gb|ABB23097.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium luteolum DSM 273]
Length = 238
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGG 83
++KL Y+ L +W+ KINL+S ++HV SL + HP+ +DLG+GGG
Sbjct: 44 IDKLVYYGELLGEWNMKINLISRKEDAPVILKHVFHSLLISLHHPFTEGEKVLDLGTGGG 103
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTC 142
PGI +I + L+++ KK + + ++ + R++E +
Sbjct: 104 LPGIPLAIAFPKTD---FLLVDATGKKITACQGMITALGLKNATALHSRVEELKGL--AF 158
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D + +R +A L L Y+ P L +
Sbjct: 159 DTVLSRQVAPLADLARYARPLLKK 182
>gi|330987012|gb|EGH85115.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011894|gb|EGH91950.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 214
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 23 DLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I + V L++S KK F
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRF 112
>gi|289677541|ref|ZP_06498431.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
FF5]
gi|320321680|gb|EFW77779.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331117|gb|EFW87088.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 211
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 20 DLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I + V L++S KK F
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRF 109
>gi|114332388|ref|YP_748610.1| methyltransferase GidB [Nitrosomonas eutropha C91]
gi|122312972|sp|Q0ADD7|RSMG_NITEC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114309402|gb|ABI60645.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosomonas eutropha C91]
Length = 214
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L KW+ NL S E RH+ DSL V P+I +D+GSG G PGI
Sbjct: 27 RLLRYIELITKWNSTHNLTSVRNPESMITRHMLDSLVVLPHISGPNI-VDVGSGAGLPGI 85
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI---TTCDV 144
I L+ E +V ++ES KKA F++ VV R + + R QE + I D
Sbjct: 86 --PIALARPEWQVV-MVESNQKKAVFMQQVV--VELRLQNVSIR-QERVEKIKPGNKVDT 139
Query: 145 ISARALADLDTLLEYS 160
+ +RA + L+ + S
Sbjct: 140 VISRAFSSLERFMRLS 155
>gi|282896993|ref|ZP_06304995.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
gi|281197645|gb|EFA72539.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
Length = 252
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--------VFQLHPYPSIW 75
E +L+ Y L + +++INL + ++FW +H+ DSLR + +L+ SI
Sbjct: 30 EQGNQLQKLYDLIVVANRQINLTRITQPKEFWEKHLWDSLRGVSPEQHFLPELNAAGSI- 88
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE 134
ID+GSG GFPG+ I + V L+++ KK +F+ ++K + R +E
Sbjct: 89 IDIGSGAGFPGLPIGIVFPHHQ---VTLLDATRKKVNFINSAIEKLPLSNATTILGRAEE 145
Query: 135 APQMI---TTCDVISARALADLDTLLEYSFP 162
Q D+ RA++ EY+ P
Sbjct: 146 IGQETLYREKYDLAVIRAVSTASVCAEYTLP 176
>gi|221135170|ref|ZP_03561473.1| methyltransferase GidB [Glaciecola sp. HTCC2999]
Length = 220
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 4 CDSNSILRANYLL--NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
D + + YL+ V+ E L+KL + + KW+K NL S ++D ++HV D
Sbjct: 9 ADQQLVAKLTYLVAKTDLTVTAEQLQKLVMYIEMMHKWNKAYNLTSIRQIDDMLVKHVLD 68
Query: 62 SLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
S+ V P+ + +ID+G+G G PGI +I E L++S K+ F++ V
Sbjct: 69 SIVV---SPFLRGTRFIDVGTGPGLPGIPLAIMHPEYE---FVLLDSLGKRVRFMQQV 120
>gi|239828705|ref|YP_002951329.1| 16S rRNA methyltransferase GidB [Geobacillus sp. WCH70]
gi|259495497|sp|C5D9Y5|RSMG_GEOSW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|239808998|gb|ACS26063.1| methyltransferase GidB [Geobacillus sp. WCH70]
Length = 238
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI-D 77
++S + L + E +Y L ++W++K+NL + + +++H DSL F S+ I D
Sbjct: 16 SLSSQALAQFERYYELLMEWNEKMNLTAITDKPSVYLKHFFDSLSPAFYYDFSQSLSICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I ++ +++++S K+ +FL ++ + F A
Sbjct: 76 VGAGAGFPSVPLKICFPHLK---LSIVDSLQKRITFLEHLAAELGLTDVAFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A + L E P +
Sbjct: 133 RKKEFRESFDIVTARAVARMSVLSELCLPLV 163
>gi|323144402|ref|ZP_08079010.1| 16S rRNA methyltransferase GidB [Succinatimonas hippei YIT 12066]
gi|322415855|gb|EFY06581.1| 16S rRNA methyltransferase GidB [Succinatimonas hippei YIT 12066]
Length = 220
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E ++KL L KW+K +NL S +D + H+ DS + L +I D+G+G G
Sbjct: 33 EKVQKLAELVILLCKWNKALNLTSIKDPDDMVVLHILDSAVISPLLTGKNIA-DVGTGAG 91
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FPG++ +I LI+S KK SF++ + E + + D
Sbjct: 92 FPGLVLAILNPDKH---FTLIDSVAKKLSFVKSASVQLKLENVTLINDRCENIKPLVPFD 148
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
I +RA A L ++E+ L K
Sbjct: 149 CIVSRAFAPLGRMVEWCIHLLDDK 172
>gi|66048355|ref|YP_238196.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
B728a]
gi|75499949|sp|Q4ZL14|RSMG_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|63259062|gb|AAY40158.1| Glucose inhibited division protein [Pseudomonas syringae pv.
syringae B728a]
gi|330881915|gb|EGH16064.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330952341|gb|EGH52601.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae Cit 7]
gi|330970318|gb|EGH70384.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aceris
str. M302273PT]
gi|330976395|gb|EGH76452.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 214
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 23 DLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I + V L++S KK F
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRF 112
>gi|284034937|ref|YP_003384868.1| methyltransferase GidB [Kribbella flavida DSM 17836]
gi|283814230|gb|ADB36069.1| methyltransferase GidB [Kribbella flavida DSM 17836]
Length = 223
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 18 TYNVSRET-----------LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
T +VSRET ++L + L L+ V W RH+ + +
Sbjct: 2 TDDVSRETPPLVEELYPGAADRLSAYAELLATEGTLRGLIGPREVPRLWDRHLLNCAVLE 61
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+L P S D+G+G G PGI+ ++ + V L+E ++ +FL VQ+
Sbjct: 62 RLIPEQSSVADVGTGAGLPGIVLALVRPDLH---VALVEPLLRRTTFLEEAVQQLGCDNA 118
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+V R ++ P + DV+++RA+A L L + P
Sbjct: 119 EVVRARAEDLPP--ASFDVVTSRAVAPLGKLAGWCLP 153
>gi|189040865|sp|A1AVB2|RSMG_RUTMC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 203
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + KL + L +KW+K NL + T+E +H+ DSL V S+ +D+GSG G
Sbjct: 21 EQISKLMNYLKLIIKWNKSYNLSAIRTMEKGVYKHLLDSLSVIAYIKDKSL-LDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PGI+ SI + LV ++++ KK F+++ + + V R+ E Q+
Sbjct: 80 LPGIVISIMRPEL---LVTVLDTVGKKCRFMQFAKTQLQLKNLNVIKNRV-ENYQIEFCF 135
Query: 143 DVISARALADLDTLLEYS 160
+ I +RA + ++ +L+ +
Sbjct: 136 EQIISRAFSKVEKILKLT 153
>gi|220904019|ref|YP_002479331.1| glucose inhibited division protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868318|gb|ACL48653.1| glucose inhibited division protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 232
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-------- 71
+V +E LE L + + +W+K +NLV + ++ R V DS F L P+
Sbjct: 21 DVPQEALEPLGIYLEMLCQWNKAMNLVGPHSWQNMLTRLVADS---FHLAPFLSGLPMPA 77
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
P W DLG+G G PGI + G ++E + K+A FL V+ +T VF
Sbjct: 78 APLTW-DLGAGAGLPGIPLRMLWPD---GSYYMVEVREKRALFLSSVLSRTHLPCTHVFR 133
Query: 130 CRIQEAPQ-MITTCDVISARALADLDTLLEYSFP 162
++ Q D I +RA LL+ + P
Sbjct: 134 GPVEHFFQGQYYQADCIVSRAFMPWRQLLDLTLP 167
>gi|330937307|gb|EGH41315.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. pisi str.
1704B]
Length = 214
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
E+L + L +KW+K NL + ++ RH+ DSL V P+ + WID+GSGGG
Sbjct: 30 EQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWIDVGSGGGM 86
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASF 113
PGI +I + V L++S KK F
Sbjct: 87 PGIPMAILFPERK---VALLDSNGKKTRF 112
>gi|269123846|ref|YP_003306423.1| methyltransferase GidB [Streptobacillus moniliformis DSM 12112]
gi|268315172|gb|ACZ01546.1| methyltransferase GidB [Streptobacillus moniliformis DSM 12112]
Length = 231
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSI 74
L+ + S + L+KL + + ++ +K +NL + +D +H D+L + ++
Sbjct: 11 LSNIDTSEDKLDKLIIYLEMLIEKNKVMNLTAIRDGKDMIEKHFIDALLLTKIIRSEEKT 70
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
IDLG+G GFPG++ ++ LV +S KK +FL V+++ + K + R +
Sbjct: 71 LIDLGTGAGFPGLVLAVYYPDKNFLLV---DSVKKKVAFLDEVIERLKLKNVKTSSERAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E + D+ R +A+L +LEY P++
Sbjct: 128 EIVKKYREKFDLALCRGVANLRIILEYMIPFI 159
>gi|167626953|ref|YP_001677453.1| 16S rRNA methyltransferase GidB [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189039392|sp|B0TW44|RSMG_FRAP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167596954|gb|ABZ86952.1| methyltransferase GidB [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 204
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 22 SRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ E +E+ LEY L KW+K N+ + ++D ++H+ DSL V + + S +D+G+
Sbjct: 20 TEEQIEQWLEYLKLLE-KWNKVYNMTAIKKIDDMLVKHLFDSLAVAK-YIKGSSTVDVGT 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGG PG++ +I + L++S KK FL+ V+K+ + I+ +
Sbjct: 78 GGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKN-VKKSLGLDNINPLNIR-IENLNG 132
Query: 141 TCDVISARALADLDTLLE 158
+ D I +RA + +DT E
Sbjct: 133 SFDNIISRAFSSVDTFYE 150
>gi|332879368|ref|ZP_08447065.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682788|gb|EGJ55688.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 206
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
+S + E+ L+ W+ KIN++S +++ + HV SL + + + S +DL
Sbjct: 11 LSEKQTEQFHQLDALYHDWNAKINVISRKDIDNLYEHHVLHSLGIAEFTRFKSGTEIMDL 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ 137
G+GGGFPGI +I +L++S KK V ++ F CR +E
Sbjct: 71 GTGGGFPGIPLAIMFPDCH---FHLVDSIGKKIKVCMEVARELGVENVTFRHCRAEEEKA 127
Query: 138 MITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 128 KF---DFVVSRAVMPLADLVK 145
>gi|322513171|ref|ZP_08066302.1| glucose inhibited division protein B [Actinobacillus ureae ATCC
25976]
gi|322121067|gb|EFX92891.1| glucose inhibited division protein B [Actinobacillus ureae ATCC
25976]
Length = 203
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N++ + E+L F L KW+K NL S ++ ++H+ DSL V + H +ID+G
Sbjct: 15 NLTDQQKEQLVGFVRLLGKWNKAYNLTSVRNPDEMLVKHILDSLVVSE-HLQGEKFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I ++ + V L++S K+ +F++ +++ R++E +
Sbjct: 74 TGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNALRELGITNVTPVLSRVEEYTEQ 130
Query: 139 ITTCDVISARALADLDTLLEYSF 161
T D + +RA A L+ ++++ +
Sbjct: 131 --TFDGVLSRAFASLNDMVDWCY 151
>gi|81427630|ref|YP_394627.1| glucose-inhibited division protein B [Lactobacillus sakei subsp.
sakei 23K]
gi|123564972|sp|Q38ZR1|RSMG_LACSS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78609269|emb|CAI54316.1| Methyltransferase GidB (Glucose Inhibited Cell Division protein B)
[Lactobacillus sakei subsp. sakei 23K]
Length = 246
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSIW 75
+VS++ L++ E ++ + ++ +NL + + E +++H DS L + L P
Sbjct: 16 DVSQKQLDQFEIYFERLVATNQNVNLTAITEKEAVYLKHFFDSVAPTLYLESLRTMPLNI 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+G+G GFP + I ++ V +++S NK+ FL +V A G + +
Sbjct: 76 CDIGAGAGFPSLPMKILFPQLK---VTIVDSLNKRIHFLEELV---AELGLTDVTLVHDR 129
Query: 136 PQMITTC--------DVISARALADLDTLLEYSFPWL 164
++ + D+++ARA+A ++ L E+ P +
Sbjct: 130 AELFSQVKRPYREQFDMVTARAVAPMNVLAEFCLPAV 166
>gi|310830135|ref|YP_003962492.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
gi|308741869|gb|ADO39529.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
Length = 239
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLS 94
L ++KIN+ + V++F +H+ DSL + +H +D+G+GGGFPG+ ++ L
Sbjct: 33 LLVMNEKINVTRITDVDEFIEKHLIDSLTCLKFIHKDVKSILDVGTGGGFPGVPLAVMLP 92
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMITTCDVISARAL 150
E + ++++ KK + + ++ + F A + + P D I +RA+
Sbjct: 93 EAE---ITMMDATGKKLKVIEDICREIGIKNVEFLHGRAEDLGKDPAYREGYDCIVSRAV 149
Query: 151 ADLDTLLEYSFPW 163
A+L L E P
Sbjct: 150 ANLCLLSELCLPL 162
>gi|241667529|ref|ZP_04755107.1| glucose-inhibited division protein B [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876075|ref|ZP_05248785.1| methyltransferase glucose-inhibited cell division protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842096|gb|EET20510.1| methyltransferase glucose-inhibited cell division protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 204
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 22 SRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ E +E+ LEY L KW+K N+ + ++D ++H+ DSL V + + S +D+G+
Sbjct: 20 TEEQIEQWLEYLKLLE-KWNKVYNMTAIKEIDDMLVKHLFDSLAVAK-YIKGSSTVDVGT 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGG PG++ +I + L++S KK FL+ V+K+ + I+ +
Sbjct: 78 GGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKN-VKKSLGLDNINPLNIR-IENLDG 132
Query: 141 TCDVISARALADLDTLLE 158
+ D I +RA + +DT E
Sbjct: 133 SFDNIISRAFSSVDTFYE 150
>gi|291288766|ref|YP_003505582.1| methyltransferase GidB [Denitrovibrio acetiphilus DSM 12809]
gi|290885926|gb|ADD69626.1| methyltransferase GidB [Denitrovibrio acetiphilus DSM 12809]
Length = 205
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWI 76
+ + E LE++E FY + + + +NL + + F+ +HV DS +F + H
Sbjct: 6 FEFTDEMLERIEKFYDMHINAT--LNLTAIKDKDSFYTKHVLDSFLLFTEKKHLLKGKIG 63
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+GGGFPG+I ++ + L++S KK FL V++ +V R ++
Sbjct: 64 DIGTGGGFPGVILAVMYPELN---FTLVDSVAKKCRFLEDAVKELGLTNVEVITSRSEDI 120
Query: 136 PQMITTCDVISARALADLDTLLEYSF 161
I +R +A ++ +++Y+
Sbjct: 121 KN--RKFSTILSRGVAKVEQMIKYTM 144
>gi|167753851|ref|ZP_02425978.1| hypothetical protein ALIPUT_02136 [Alistipes putredinis DSM 17216]
gi|167658476|gb|EDS02606.1| hypothetical protein ALIPUT_02136 [Alistipes putredinis DSM 17216]
Length = 207
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 15 LLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
L++ Y +++R + E Y L+ W+ KIN++S + ++RHV SL + ++ P+
Sbjct: 4 LIDKYFPDLTRPQRGQFEALYALYADWNTKINVISRKDFDQLYLRHVLHSLSIAKVCPFA 63
Query: 72 PSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P + D+G GGGFP + +I ++S KK ++ V + C
Sbjct: 64 PGARVLDVGCGGGFPSVPLAILFPEAH---FTAVDSIGKKIKVVQGVAEGLGLANLTPLC 120
Query: 131 -RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R + P+ D + +RA+ ++ T + W++ K
Sbjct: 121 ARAETLPERY---DYVVSRAVTEMPTFVG----WVWDK 151
>gi|238795164|ref|ZP_04638753.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
intermedia ATCC 29909]
gi|238725522|gb|EEQ17087.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
intermedia ATCC 29909]
Length = 206
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 26/161 (16%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LLNT + +KL+ + L KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLDSLLNTAGIVLPDQQKLQLIGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSIVV--- 60
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------V 118
+PY +ID+G+G G PGI +I + L++S K+ FLR V +
Sbjct: 61 NPYLQGDRFIDVGTGPGLPGIPLAIVRPTAH---FTLLDSLGKRVRFLRQVQHELGLNNI 117
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ +R + FA + D + +RA A L +L +
Sbjct: 118 EPVQSRVEDFAAK--------PPFDGVISRAFASLQDMLSW 150
>gi|157144376|ref|YP_001451695.1| 16S rRNA methyltransferase GidB [Citrobacter koseri ATCC BAA-895]
gi|166224581|sp|A8ACP6|RSMG_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157081581|gb|ABV11259.1| hypothetical protein CKO_00080 [Citrobacter koseri ATCC BAA-895]
Length = 207
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
+ KW+K NL S + +RH+ DS+ V H +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSI-VMAPHLQGERFIDVGTGPGLPGIPLSIVRP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADL 153
L++S K+ FLR V + R++E P VIS RA A L
Sbjct: 89 ESH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEEFPSEPPFDGVIS-RAFASL 144
Query: 154 DTLLEY 159
D +L +
Sbjct: 145 DDMLSW 150
>gi|256827811|ref|YP_003151770.1| glucose-inhibited division protein B [Cryptobacterium curtum DSM
15641]
gi|256583954|gb|ACU95088.1| glucose-inhibited division protein B [Cryptobacterium curtum DSM
15641]
Length = 225
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWI 76
Y +S +E + L+ +KK+NL + + + H+EDSL + +
Sbjct: 3 YEISSHKQACMEQYLKAVLEVNKKVNLTRIDSFKQGLLLHIEDSLGGLPEFMDALLGPAL 62
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA--CRIQE 134
DLGSGGGFPG+ S+ + E +V L++S KK +R ++ + A R +E
Sbjct: 63 DLGSGGGFPGVPLSL---AAERPIV-LLDSVEKKVKAVRTILSDLNLGSSISAQVGRAEE 118
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
A + ++ V+ ARA++ L +L E + P L+
Sbjct: 119 RALKSPSSFSVVVARAVSSLPSLCELASPLLH 150
>gi|88797177|ref|ZP_01112767.1| methyltransferase GidB [Reinekea sp. MED297]
gi|88780046|gb|EAR11231.1| methyltransferase GidB [Reinekea sp. MED297]
Length = 216
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGSGGGF 84
L++L ++ L +KW+K NL S D RH+ DSL + L P +D+G+G G
Sbjct: 25 LDRLLAYHALLVKWNKAYNLTSVRDAGDMVDRHLVDSLSILPALTAEP--LLDVGTGPGL 82
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG+I ++ + V L++S KK FL V E+ Q +
Sbjct: 83 PGMIIALLKPDVP---VFLLDSNGKKTRFLNQVKMSLNVENVTVVHHRLESWQPERQFEQ 139
Query: 145 ISARALADLDTLLEYS 160
I++RA A L ++ +S
Sbjct: 140 ITSRAFATLSDMVSFS 155
>gi|169832368|ref|YP_001718350.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
gi|169639212|gb|ACA60718.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
Length = 240
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIE 97
+ + NL + +T + +H DSL + + P I D+GSG GFPG+ I ++
Sbjct: 39 AARHNLTAITTPREIVAKHFLDSLAGLLVIDPAAGTRIIDVGSGAGFPGLPLKIVRPELK 98
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMITTCDVISARALADL 153
+ L+ES KKA FL VV + G +V R +EA P T ARA+A +
Sbjct: 99 ---LTLLESSRKKADFLEAVVGELGLEGVQVTGRRAEEAGRDPAHRGTYHWAVARAVAPV 155
Query: 154 DTLLEYSFPWL 164
L EY P+L
Sbjct: 156 SVLSEYCLPFL 166
>gi|330470827|ref|YP_004408570.1| 16S rRNA methyltransferase GidB [Verrucosispora maris AB-18-032]
gi|328813798|gb|AEB47970.1| 16S rRNA methyltransferase GidB [Verrucosispora maris AB-18-032]
Length = 236
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ + V +L P + ID+GSG G PG++ +I ++ V L
Sbjct: 38 GLIGPREAPRIWDRHLLNCAVVGELIPTDATVIDVGSGAGLPGLVLAIARPDLQ---VTL 94
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACR-----IQEAPQMITTCDVISARALADLDTLLE 158
+E ++ +FL V V R + P + DV++ARA+A LD L
Sbjct: 95 LEPLARRTTFLTEAVDALGLEDSVQVLRGRAEEVAAGPDPVRG-DVVTARAVAPLDRLAA 153
Query: 159 YSFP 162
+ P
Sbjct: 154 WCLP 157
>gi|332703863|ref|ZP_08423951.1| Ribosomal RNA small subunit methyltransferase G [Desulfovibrio
africanus str. Walvis Bay]
gi|332554012|gb|EGJ51056.1| Ribosomal RNA small subunit methyltransferase G [Desulfovibrio
africanus str. Walvis Bay]
Length = 233
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 28 KLEYFYFLFLKWSKKINLVSSST--------VEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
KL + L ++W++++NLV +S+ V D W H+ D L L P +DLG
Sbjct: 43 KLALYLGLLVEWNRRMNLVGASSWREVLSRLVMDSW--HLADHLAELPLPAEPRS-LDLG 99
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQM 138
+G G PGI I +S G L+E + K+ FLR V K R V R++
Sbjct: 100 AGAGLPGIPLRIFWNS---GEYRLVEIREKRTIFLRVAVAKLDLPRTFVLRSRVENLGAD 156
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
D++ RA LE P L
Sbjct: 157 ALPADLVLGRAFKPWPEYLELVQPML 182
>gi|297193301|ref|ZP_06910699.1| methyltransferase gidB [Streptomyces pristinaespiralis ATCC 25486]
gi|197718382|gb|EDY62290.1| methyltransferase gidB [Streptomyces pristinaespiralis ATCC 25486]
Length = 246
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETL-----EKLEYFYFLFLKWSKKINLVSSSTVEDFW 55
M+Y + + A L +R+ E + Y L K+ L+ V W
Sbjct: 1 MRYGRTVPVTEAAQLPQAPEAARKVFGEYFPEAVRYAELLADAGVKR-GLIGPREVPRLW 59
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL+
Sbjct: 60 ERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRPDLK---ITLLEPLLRRTNFLQ 116
Query: 116 YVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
VV+ T RG R +E + V++ARA+A LD L + P L
Sbjct: 117 EVVELLGLDHVTVVRG-----RAEEVLGKVPPVHVVTARAVAPLDRLAGWGVPLL 166
>gi|89100945|ref|ZP_01173792.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
gi|89084354|gb|EAR63508.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
Length = 238
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S +++ +Y ++W++K+NL + + + +++H DS+ + P D
Sbjct: 16 SLSPRQIDQYNIYYETLVEWNEKMNLTAITDKPEVYLKHFYDSVSAAFYFDFSKPLHICD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP + I I V +++S NK+ +FL ++ K F A
Sbjct: 76 VGAGAGFPSLPIKIAFPEIS---VTIVDSLNKRINFLEHLAGKLGLENVRFVHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFP 162
+ + DV++ARA+A + L E P
Sbjct: 133 QNKEYREAFDVVTARAVARMSVLTELCLP 161
>gi|307330011|ref|ZP_07609163.1| methyltransferase GidB [Streptomyces violaceusniger Tu 4113]
gi|306884387|gb|EFN15421.1| methyltransferase GidB [Streptomyces violaceusniger Tu 4113]
Length = 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ ++ + L
Sbjct: 40 GLIGPREVPRLWERHLLNCAVLSEVVPEEVTVCDVGSGAGLPGIPLALTRPDLQ---ITL 96
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FLR VV+ T RG R +E +T V++ARA+A LD L
Sbjct: 97 LEPLLRRTNFLREVVELLGLEHVTVVRG-----RAEEVLGKLTPMHVVTARAVAPLDRLA 151
Query: 158 EYSFPWL 164
+ P L
Sbjct: 152 GWGVPLL 158
>gi|330961497|gb|EGH61757.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 214
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S+ ++L + L +KW+K NL + ++ RH+ DSL V P+ + W+D
Sbjct: 23 DLSQAQHDQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWMD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I V+L++S KK F
Sbjct: 80 VGSGGGMPGIPMAILFPERH---VSLLDSNGKKTRF 112
>gi|315453598|ref|YP_004073868.1| glucose-inhibited division protein B GidB [Helicobacter felis ATCC
49179]
gi|315132650|emb|CBY83278.1| glucose-inhibited division protein B; GidB [Helicobacter felis ATCC
49179]
Length = 180
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFP 85
+ L+ F L L+W++ L + + + + DS+RV + P+ + +D+GSG GFP
Sbjct: 4 QTLDRFSALLLEWNRTHALSGAKHLTQVQAQ-ITDSVRVLDFIQPFKT-CLDIGSGAGFP 61
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDV 144
I +I L+E KK +FL +V A R+Q+ P M + ++
Sbjct: 62 AIPLAIHCPKAH---FTLLEPNAKKIAFLHHVKMTLALDNITLKRVRLQDLPPM--SVEL 116
Query: 145 ISARALADLDTLLEYSFPWL 164
I++RAL L+ S P+L
Sbjct: 117 ITSRALMGAQELITLSTPFL 136
>gi|198284889|ref|YP_002221210.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665157|ref|YP_002427569.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249410|gb|ACH85003.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517370|gb|ACK77956.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 221
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 10/155 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V E + L ++ L +W+ NL + + RH+ DSL V P ++ +D+G
Sbjct: 27 TVGAEQRDLLIHYVALLQRWNATHNLTAVRDPLEMVPRHLLDSLAVLPYLPEGAV-VDIG 85
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PGI +I L+E K+ +FLRY + A + E
Sbjct: 86 SGAGLPGIPLAI---CCPAQAFTLVEPAAKRVAFLRYAIADLGLTNVQVAPQGSEDYHPD 142
Query: 140 TTCDVISARA---LADLDTL---LEYSFPWLYQKK 168
DVI +RA LA LD + L+ W+ +K
Sbjct: 143 LLPDVIISRATAPLARLDAMTRHLQGPHTWVLAQK 177
>gi|296137581|ref|YP_003644823.1| methyltransferase GidB [Thiomonas intermedia K12]
gi|295797703|gb|ADG32493.1| methyltransferase GidB [Thiomonas intermedia K12]
Length = 224
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDLGSGGGF 84
++L + L +W++ NL + +E H+ D L P +D+GSGGG
Sbjct: 35 QQLLDYTALLQRWNRVFNLTAVRDLEGIARLHLADCLAALPALQRLAPQRLLDVGSGGGL 94
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCD 143
PGI+ +I L E V+LI++ KK +FL+ R V R+ EA D
Sbjct: 95 PGIVFAIGLPEAE---VHLIDAVQKKCAFLQQTSGSLQLRQVSVHHARV-EALADARGFD 150
Query: 144 VISARALADLDTLLEYS 160
+++RA +DL L++ +
Sbjct: 151 CMTSRAFSDLPLLIQST 167
>gi|256826454|ref|YP_003150414.1| glucose-inhibited division protein B [Kytococcus sedentarius DSM
20547]
gi|256689847|gb|ACV07649.1| glucose-inhibited division protein B [Kytococcus sedentarius DSM
20547]
Length = 241
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 6/141 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + E F L + L+ V W RHV + V + +D+GSG G
Sbjct: 27 ELLPQAERFAELLATSGAQRGLIGPREVPRLWDRHVLNCAVVADVLDGADHVLDVGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVFACRIQEAPQMITT 141
PGI ++ V L+E ++ +L VVQ+ R V R + P + T
Sbjct: 87 LPGIALALAAPDTR---VTLVEPMLRRTVWLEEVVQELDLTDRVTVIRSRAENLPSDV-T 142
Query: 142 CDVISARALADLDTLLEYSFP 162
V++ARA+A L TL + P
Sbjct: 143 APVVTARAVARLSTLAPWCLP 163
>gi|92115409|ref|YP_575337.1| methyltransferase GidB [Chromohalobacter salexigens DSM 3043]
gi|122419018|sp|Q1QSC0|RSMG_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91798499|gb|ABE60638.1| 16S rRNA m(7)G-527 methyltransferase [Chromohalobacter salexigens
DSM 3043]
Length = 208
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ NL + E RH+ DS V P + +D+G+G G PG++ +I S+E
Sbjct: 37 KWNRAYNLTAVRDPEQMVTRHLLDSASVATAVRGPRL-LDVGAGAGLPGLVLAILDPSLE 95
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV--ISARALADLDT 155
V +++ KK F R V + G +Q + TT D I +RA A L T
Sbjct: 96 ---VTMLDGNGKKVRFQRQAVLEL---GLENVTPVQARVEHFTTRDFDQIVSRAFAQLAT 149
Query: 156 LLEYSFPWLYQ 166
+E + P L +
Sbjct: 150 FVELTRPLLAE 160
>gi|291446138|ref|ZP_06585528.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
gi|291349085|gb|EFE75989.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
Length = 246
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETL-----EKLEYFYFLFLKWSKKINLVSSSTVEDFW 55
M+Y + + A L +RE E + Y L K+ L+ V W
Sbjct: 1 MRYGRTVPVTEAAELPQAPAEAREVFGELFPEAVRYAELLADAGVKR-GLIGPREVPRLW 59
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL+
Sbjct: 60 ERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRPDLK---ITLLEPLLRRTNFLQ 116
Query: 116 YVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
VV+ T RG R +E + V++ARA+A LD L + P L
Sbjct: 117 EVVELLGLDHVTVVRG-----RAEEVLGTLQPVQVVTARAVAPLDRLAGWGVPLL 166
>gi|163842271|ref|YP_001626676.1| 16S rRNA methyltransferase GidB [Renibacterium salmoninarum ATCC
33209]
gi|189040714|sp|A9WVP1|RSMG_RENSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|162955747|gb|ABY25262.1| methyltransferase [Renibacterium salmoninarum ATCC 33209]
Length = 215
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV + V +L + D+GSG G PG+ ++ + + L
Sbjct: 38 GLIGPREVPRLWDRHVLNCAVVVELIEIDATVADVGSGAGLPGLCLALARPDLS---ITL 94
Query: 104 IESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
IE ++ ++L VV +V F R ++A + C V++ARA++ LD L +
Sbjct: 95 IEPLERRVTWLSEVVADLGLSDQVTLFRMRAEQAVDEV-NCSVVTARAVSALDKLAGLTI 153
Query: 162 PWLY 165
P L+
Sbjct: 154 PLLH 157
>gi|218291086|ref|ZP_03495109.1| methyltransferase GidB [Alicyclobacillus acidocaldarius LAA1]
gi|218238971|gb|EED06178.1| methyltransferase GidB [Alicyclobacillus acidocaldarius LAA1]
Length = 240
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
V+ E +L + L +W++++NL + + WI+H DS + Q+ + I
Sbjct: 15 VTGEAERELRRYGELLAEWNERLNLTAIVEAREMWIKHFLDSAAIAQVPAWREIAERGGR 74
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ 133
ID+GSG G PGI +I ++ L ++ K+ F+ +V+ A + R++
Sbjct: 75 VIDIGSGAGIPGIPLAILWRNVS---FVLCDASRKRVQFVEHVIGDLGLANVRAVHARME 131
Query: 134 E---APQMITTCDVISARALADLDTLLEYSFPWL 164
E P + D ARA+A + LLEY+ P L
Sbjct: 132 EFGRQPGARGSFDAAVARAVARSNVLLEYAAPML 165
>gi|288575860|ref|ZP_05977731.2| 16S rRNA methyltransferase GidB [Neisseria mucosa ATCC 25996]
gi|288566893|gb|EFC88453.1| 16S rRNA methyltransferase GidB [Neisseria mucosa ATCC 25996]
Length = 295
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L + L KW+K NL + H+ DSL + +D+G
Sbjct: 105 DLSAEQQTLLLAYTDLLKKWNKTYNLTALRDEAQMVSHHLLDSLTLLPYLQGAQTMLDVG 164
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVFACRIQEAPQM 138
SGGG PGI T+I + + L+++ KK +FL+ V++ A +V + R+ EA Q
Sbjct: 165 SGGGQPGIPTAICHPDLN---ITLLDANTKKTAFLQQAVIELGLANVRVVSGRV-EAVQD 220
Query: 139 ITTCDVISARALADL 153
D+I++RA A+L
Sbjct: 221 F-QADIITSRAFAEL 234
>gi|284993434|ref|YP_003411989.1| methyltransferase GidB [Geodermatophilus obscurus DSM 43160]
gi|284066680|gb|ADB77618.1| methyltransferase GidB [Geodermatophilus obscurus DSM 43160]
Length = 223
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ +S V P + +D+GSG G PGI ++ + + L
Sbjct: 47 GLIGPREVPRLWERHILNSAAVADAVPPGARVVDVGSGAGLPGIPLALARPDLR---LTL 103
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEY 159
+E ++ FL VV + A +V R +E + DV++ARA+A L L+ +
Sbjct: 104 VEPMARRVEFLEEVVAELGAPWRVVRGRAEERSVRAAVGPVDVVTARAVAALPRLVSW 161
>gi|325265689|ref|ZP_08132378.1| glucose inhibited division protein B [Kingella denitrificans ATCC
33394]
gi|324982820|gb|EGC18443.1| glucose inhibited division protein B [Kingella denitrificans ATCC
33394]
Length = 210
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+ NL + H+ DSL + + +D+GSGGG PGI +I +
Sbjct: 36 KWNHTYNLTALRDENQMISHHILDSLTLLPYIKNATSMMDVGSGGGMPGIPAAICRPDLN 95
Query: 98 GGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALA 151
+ L++S KK SFL+ V + T A G+V A ++ DV+++RA A
Sbjct: 96 ---ITLLDSNTKKTSFLQQAVIELGLQNVTVASGRVEAMHDKK-------VDVVTSRAFA 145
Query: 152 DL 153
+L
Sbjct: 146 EL 147
>gi|225457144|ref|XP_002283664.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 208
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-------------DLGSGGGFPGIIT 89
+NL + + ++ RHV DSL + P S +I D+GSG G PG+I
Sbjct: 1 MNLTAVTKADEVMERHVGDSLAMIP--PIQSSYIAHCDSSCNNISLVDVGSGPGLPGLIL 58
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMI---TTCDVI 145
+I S + + L+ES NK+ FL + V T + +V R + Q I DV
Sbjct: 59 AIACPSWK---ITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRAENLGQNIGFREVFDVA 115
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+A++ L EY P +
Sbjct: 116 VARAVAEMRILAEYCLPLV 134
>gi|289436054|ref|YP_003465926.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289172298|emb|CBH28844.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 238
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + + SI D
Sbjct: 17 LSEAQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSIC-D 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I +E V++++S K+ +FL + +K A F A
Sbjct: 76 VGAGAGFPSIPIKICFPHLE---VSIVDSLKKRMTFLDALAEKLALTNVHFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 133 QNKAHREKYDLVTARAVARMSVLSELCLPLV 163
>gi|302063885|ref|ZP_07255426.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
K40]
gi|302131969|ref|ZP_07257959.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|330876346|gb|EGH10495.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330964188|gb|EGH64448.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 214
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + W+D
Sbjct: 23 DLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWMD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I ++L++S KK F
Sbjct: 80 VGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRF 112
>gi|57237822|ref|YP_179070.1| methyltransferase GidB [Campylobacter jejuni RM1221]
gi|73621005|sp|Q5HUG5|RSMG_CAMJR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|57166626|gb|AAW35405.1| methyltransferase GidB [Campylobacter jejuni RM1221]
Length = 188
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L G +L E KKA+FLR + ++ + ++ ++QE Q I D
Sbjct: 75 PAVFLAFLLQ----GNFHLFEPNPKKAAFLRTLKIECELSNLHIYKEKVQEY-QNIFKAD 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDVKPLLE 144
>gi|146309630|ref|YP_001190095.1| glucose-inhibited division protein B [Pseudomonas mendocina ymp]
gi|189040709|sp|A4Y197|RSMG_PSEMY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145577831|gb|ABP87363.1| 16S rRNA m(7)G-527 methyltransferase [Pseudomonas mendocina ymp]
Length = 214
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----W 75
+S E+L + L +KW+K NL + ++ RH+ DSL V P+ + W
Sbjct: 21 ELSERQQEQLLAYLGLLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVV---PFVAERGDNW 77
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQE 134
+D+GSGGG PGI +I L++S KK FL V ++ A +V R+ E
Sbjct: 78 LDVGSGGGMPGIPLAIMFPERR---FTLLDSNGKKTRFLVQVKLELKLANLEVVHSRV-E 133
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
+ D IS+RA + L +++
Sbjct: 134 TYRPEQPFDGISSRAFSSLQDFSDWT 159
>gi|291615572|ref|YP_003518314.1| GidB [Pantoea ananatis LMG 20103]
gi|291150602|gb|ADD75186.1| GidB [Pantoea ananatis LMG 20103]
Length = 208
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S + ++L + L KW+K NL S + +RH+ DS+ V H S +ID+G
Sbjct: 15 SLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVAPHLQGSRFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G G PGI +I + L++S K+ FLR V + + R++ P
Sbjct: 74 TGPGLPGIPLAIVMPEAH---FTLLDSLGKRVRFLRQVQHELGLTNIEPVQSRVEAFPSE 130
Query: 139 ITTCDVISARALADLDTLLEY 159
VIS RA A L+ ++ +
Sbjct: 131 PPFDGVIS-RAFASLEDMVSW 150
>gi|315128179|ref|YP_004070182.1| glucose-inhibited division protein B [Pseudoalteromonas sp. SM9913]
gi|315016692|gb|ADT70030.1| glucose-inhibited division protein B [Pseudoalteromonas sp. SM9913]
Length = 206
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++++ ++L + L KW+K NL S ++ ++H+ DSL V H +ID+G+
Sbjct: 17 LTQKQQQQLVSYVELLDKWNKAYNLTSVRLPQEMMVKHIMDSL-VVAPHLTGHHYIDVGT 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMI 139
G G PGI+ +I L + L++S K+ FL +V + R++E Q
Sbjct: 76 GPGLPGIVLAIALPDTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEEY-QPS 131
Query: 140 TTCDVISARALADLDTLLEY 159
D + +RA A L ++++
Sbjct: 132 VKLDGVLSRAFASLQDMIDW 151
>gi|28872708|ref|NP_795327.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213968449|ref|ZP_03396592.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato T1]
gi|301384264|ref|ZP_07232682.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
Max13]
gi|37999548|sp|Q87TS4|RSMG_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28855964|gb|AAO59022.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213926737|gb|EEB60289.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato T1]
Length = 211
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V P+ + W+D
Sbjct: 20 DLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWMD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I ++L++S KK F
Sbjct: 77 VGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRF 109
>gi|241895296|ref|ZP_04782592.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
gi|241871602|gb|EER75353.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
Length = 239
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WIDLGSG 81
L + + +Y + ++ +NL + + +D +++H DSL + +P ID+G+G
Sbjct: 22 LAQYQTYYDRLVSVNEHMNLTAITDRDDVYLKHFYDSLTLAWAYPKLQTDQLRMIDVGAG 81
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQ 133
GFP + I ++ + +I++ NK+ FL+ +V + AR + F +
Sbjct: 82 AGFPSLPLKIAFPQLK---ITIIDALNKRIKFLQELVTELGLEDVTVVHARAEEFGHK-- 136
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+AP DV +ARALA L+ L E + P +
Sbjct: 137 KAPNR-EQFDVATARALARLNVLGELTLPLV 166
>gi|319790745|ref|YP_004152385.1| methyltransferase gidb [Variovorax paradoxus EPS]
gi|315593208|gb|ADU34274.1| methyltransferase GidB [Variovorax paradoxus EPS]
Length = 213
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--- 66
LRA +S E+L + L LKW+K NL + H+ DSL V
Sbjct: 8 LRAGAGALGVTLSDRQGEQLLAYGTLMLKWNKVYNLTAVRDPAGVMTHHLLDSLAVIAPL 67
Query: 67 -QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAAR 124
+ +P +D+GSG G PG+I +I I+ V+ +++ KKA+F++ V V+
Sbjct: 68 QRQYPEQGRLLDVGSGAGLPGVIIAIMRPDID---VSCLDAVAKKAAFVQQVAVELELPN 124
Query: 125 GKVFACRIQEAPQMITTCDVISARALADL 153
+ R++ + + +VIS+RA A L
Sbjct: 125 LRGLHARVE---LLEGSYNVISSRAFASL 150
>gi|254557729|ref|YP_003064146.1| glucose-inhibited division protein B [Lactobacillus plantarum JDM1]
gi|254046656|gb|ACT63449.1| glucose-inhibited division protein B [Lactobacillus plantarum JDM1]
Length = 244
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWI 76
++ + L + ++ L + +K+ NL + + + +++H DSL V L
Sbjct: 17 LTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTPAFYVPALRDQQLTIC 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-- 133
D+G+G GFP I I ++ V +++S NK+ +FL +VQ+ G K F R +
Sbjct: 77 DVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQLGLTGVKTFHDRAETF 133
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D+++ARA+A L L E P +
Sbjct: 134 AGKKSAHRESYDIVTARAVARLSVLSELCLPLV 166
>gi|56461729|ref|YP_157010.1| 16S rRNA methyltransferase GidB [Idiomarina loihiensis L2TR]
gi|81600227|sp|Q5QZI9|RSMG_IDILO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56180739|gb|AAV83461.1| Predicted S-adenosylmethionine-dependent methyltransferase
[Idiomarina loihiensis L2TR]
Length = 206
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N+S +E+ L KW+K NL S +D RH+ DSL V Q + + +ID+G
Sbjct: 15 NLSEAQIEQQLALVGLLDKWNKAYNLTSVRNPKDMLTRHIMDSLAVRQ-YLHGQRFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQ 133
+G G PG+ +I E L++S K+ F+R V + TA + +V
Sbjct: 74 TGPGLPGLPLAIAEPDNE---FVLLDSLGKRIRFIRQVCHELKLTNVTAVQARV------ 124
Query: 134 EAPQMITTCDVISARALADLDTLL 157
E Q D + +RA A L+ +L
Sbjct: 125 EDYQDEKQFDGVISRAFASLNDML 148
>gi|254483171|ref|ZP_05096404.1| methyltransferase GidB [marine gamma proteobacterium HTCC2148]
gi|214036542|gb|EEB77216.1| methyltransferase GidB [marine gamma proteobacterium HTCC2148]
Length = 169
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGG 82
T ++L + L +KW++ NL + E +H+ DSL + PY ID+G+GG
Sbjct: 9 TQQRLLAYLELMIKWNRAYNLTAVRDPEQMVTKHLLDSLAI---APYLAGDYLIDVGTGG 65
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
G PG+ SI + +L++S KK FL V V EA T
Sbjct: 66 GLPGVPLSIVFPDRQ---FHLLDSNGKKTRFLFQVKTALGLDNMVVHQARVEAFDSETPF 122
Query: 143 DVISARALADLDTLLE 158
D + +RA A L+ +++
Sbjct: 123 DAVLSRAFASLEDMVD 138
>gi|157737479|ref|YP_001490162.1| 16S rRNA methyltransferase GidB [Arcobacter butzleri RM4018]
gi|189039380|sp|A8EU69|RSMG_ARCB4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157699333|gb|ABV67493.1| glucose inhibited division protein B [Arcobacter butzleri RM4018]
Length = 194
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E E F L +W NL T +D + ++ DSL + D+G+G G+PG
Sbjct: 19 EDCEVFVKLLQQWGTIHNLSGRLTRDDIY-ENILDSLYPLTFIEKYESFADIGTGAGYPG 77
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQMITTCDVI 145
+I +I L + LIE + K+ SFL +V V C R++E + D+I
Sbjct: 78 LILAIALRDTKAY---LIEPRIKRVSFLNFVKATLKLDNLVVLCNRVEEVKDL--QVDLI 132
Query: 146 SARALADLDTLLE 158
++RA+ + LL+
Sbjct: 133 TSRAVTNTSLLLD 145
>gi|300719170|ref|YP_003743973.1| methyltransferase, glucose-inhibited division protein B [Erwinia
billingiae Eb661]
gi|299065006|emb|CAX62126.1| Methyltransferase, Glucose-inhibited division protein B [Erwinia
billingiae Eb661]
Length = 206
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
T ++S + +L + + KW+K NL S E IRH+ DS+ V + H S +ID
Sbjct: 13 TISLSDQQKNQLVGYVEMLHKWNKAYNLTSVRDPEQMLIRHIMDSI-VVEPHLQGSRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAP 136
+G+G G PG+ +I L++S K+ FL+ V + + R+++ P
Sbjct: 72 VGTGPGLPGVPLAIVRPDAH---FTLLDSLGKRIRFLKQVQHELKLVNIEPVQSRVEDFP 128
Query: 137 QMITTCDVISARALADLDTLLEY 159
VIS RA A L+ +L +
Sbjct: 129 AEPPFDGVIS-RAFASLNDMLNW 150
>gi|332300024|ref|YP_004441945.1| Ribosomal RNA small subunit methyltransferase G [Porphyromonas
asaccharolytica DSM 20707]
gi|332177087|gb|AEE12777.1| Ribosomal RNA small subunit methyltransferase G [Porphyromonas
asaccharolytica DSM 20707]
Length = 224
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWI--D 77
+S ++L Y L+ +W+ +IN++S +++ ++ HV SL + L P P+ + D
Sbjct: 23 LSPTAQQQLTALYPLYKEWNARINVISRRDIDNLYLHHVMHSLALAWLLPDEPTSYTIAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---AARGKVFACRIQE 134
+G GGGFP I +I + L++ I K A + + T +V +C ++
Sbjct: 83 VGCGGGFPSIPLAILYPQYQFLLIDSIAKKLHVAQAIADEIGLTNVSTHHTRVESCELR- 141
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
CD I +RA L L EY+
Sbjct: 142 -------CDYIVSRAAMPLGLLYEYT 160
>gi|110637602|ref|YP_677809.1| 16S rRNA methyltransferase GidB [Cytophaga hutchinsonii ATCC 33406]
gi|123163685|sp|Q11VU7|RSMG_CYTH3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110280283|gb|ABG58469.1| 16S rRNA m(7)G-527 methyltransferase [Cytophaga hutchinsonii ATCC
33406]
Length = 207
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWI 76
++S E +++ + L+ +W++KIN+VS ++ + RHV SL +V P I +
Sbjct: 10 HLSPEQVKQFGALHSLYTEWNEKINVVSRKDIDQLYERHVLHSLGIAKVMAFKPGTRI-L 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
D+G+GGGFPGI SI + L++ I K K
Sbjct: 69 DVGTGGGFPGIPLSILFPESDFHLIDSIGKKIK 101
>gi|288924953|ref|ZP_06418889.1| 16S rRNA methyltransferase GidB [Prevotella buccae D17]
gi|315607986|ref|ZP_07882979.1| glucose inhibited division protein B [Prevotella buccae ATCC 33574]
gi|288338143|gb|EFC76493.1| 16S rRNA methyltransferase GidB [Prevotella buccae D17]
gi|315250455|gb|EFU30451.1| glucose inhibited division protein B [Prevotella buccae ATCC 33574]
Length = 208
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYP 72
Y N + E +L+ Y +W+ KIN++S +++ + RHV SL + +H P
Sbjct: 8 YFPNLSKIQEEQYAQLDQLY---REWNAKINVISRKDMDNLYERHVLHSLAIACNIHFRP 64
Query: 73 SIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ D G+GGGFPGI +I ++ +I+ KK + V Q A K
Sbjct: 65 GTEVLDFGTGGGFPGIPLAIMFPEVK---FRMIDGTGKKIRVVNEVAQ--ALELKNVTAV 119
Query: 132 IQEAPQMITTCDVISARALADLDTLLE 158
Q + D + +RA+ L L++
Sbjct: 120 HQRGEEEKGKFDFVVSRAVMPLPDLVK 146
>gi|271502657|ref|YP_003335683.1| methyltransferase GidB [Dickeya dadantii Ech586]
gi|270346212|gb|ACZ78977.1| methyltransferase GidB [Dickeya dadantii Ech586]
Length = 206
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R N L+ ++ +K + ++ L KW+K NL S E +RH+ DSL V +
Sbjct: 4 RLNSLMQRAGMALTDQQKNQLLQYVALLHKWNKAYNLTSVREPEQMLVRHIMDSL-VVEP 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H + +ID+G+G G PG+ +I + + V L++S K+ FLR V + +
Sbjct: 63 HLCGNRFIDVGTGPGLPGVPLAI--ARPDAHFV-LLDSLGKRVRFLRQVQHELGLSNIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEY 159
R+++ P VIS RA A L ++ +
Sbjct: 120 VQSRVEDFPAEPPFDGVIS-RAFASLQDMVNW 150
>gi|119471637|ref|ZP_01614022.1| glucose-inhibited division protein B [Alteromonadales bacterium
TW-7]
gi|119445416|gb|EAW26703.1| glucose-inhibited division protein B [Alteromonadales bacterium
TW-7]
Length = 206
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S ++ ++H+ DSL V H +ID+G+G G PG
Sbjct: 23 QQLVRYVELLDKWNKAYNLTSVRLPQEMMVKHIMDSL-VVAPHLPGHHYIDVGTGPGLPG 81
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVI 145
I+ +I L + + L++S K+ FL +V + R++E Q D +
Sbjct: 82 IVLAIALPNTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEEY-QPSVKLDGV 137
Query: 146 SARALADLDTLLEY 159
+RA A L ++++
Sbjct: 138 LSRAFASLQDMVDW 151
>gi|289628221|ref|ZP_06461175.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289649111|ref|ZP_06480454.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 211
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 20 DLSPAQHEQLLAYLALLTKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I + V L++S KK F
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRF 109
>gi|331104702|ref|ZP_04590132.2| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024530|gb|EGI04586.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 214
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
E+L + L +KW+K NL + ++ RH+ DSL V P+ + W+D+GSGGG
Sbjct: 30 EQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVV---PFIEGTRWMDVGSGGGM 86
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASF 113
PGI +I + V+L++S KK F
Sbjct: 87 PGIPMAILFPERK---VSLLDSNGKKTRF 112
>gi|254458713|ref|ZP_05072137.1| methyltransferase GidB [Campylobacterales bacterium GD 1]
gi|207084479|gb|EDZ61767.1| methyltransferase GidB [Campylobacterales bacterium GD 1]
Length = 192
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 36 FLKWSKKINLV---SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQ 92
KW+K NL S+++++F + D++ P +D+G+G GFPG+I ++
Sbjct: 29 LFKWNKIHNLTGAKDSNSIDEF----IYDAVFPVSFLPKAKNLLDIGTGAGFPGMILALA 84
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L + V L+E K+ASFL+++ +V R+++ I D++++RA+
Sbjct: 85 LPDTQ---VTLVEPLTKRASFLQFIKADLELDNVRVVKKRVEDMEAEI--FDIVTSRAVT 139
Query: 152 DLDTLLEYS 160
D LL S
Sbjct: 140 DTQMLLNLS 148
>gi|284052796|ref|ZP_06383006.1| 16S rRNA methyltransferase GidB [Arthrospira platensis str. Paraca]
Length = 192
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIW 75
S L+ Y L ++++NL + FW +H+ DSLR + P+ P
Sbjct: 26 SDRQLQIFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLR--GVAPWLSGDKLPLRV 83
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI +I + E V L++S KK +FL+ +V + + + R++
Sbjct: 84 IDIGTGAGFPGIPIAIAIPQAE---VTLLDSTGKKIAFLQALVPRLGLENAIPYLGRVEA 140
Query: 135 APQMI---TTCDVISARALADLDTLLEYSFPWL 164
Q T D++ RA+A EYS P L
Sbjct: 141 IAQQSDHRQTYDLVVLRAVAAATVAAEYSLPLL 173
>gi|330870068|gb|EGH04777.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 214
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+L + L KW+K NL + ++ RH+ DSL V P+ + WID
Sbjct: 23 DLSPAQHEQLLAYLALLTKWNKAYNLTAVRNPDEMVSRHLLDSLSVV---PFIEGTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+GSGGG PGI +I + V L++S KK F
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRF 112
>gi|304398009|ref|ZP_07379884.1| methyltransferase GidB [Pantoea sp. aB]
gi|304354295|gb|EFM18667.1| methyltransferase GidB [Pantoea sp. aB]
Length = 205
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ ++S + ++L + L KW+K NL S E +RH+ DS+ V H S +ID
Sbjct: 13 SISLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPEQMLVRHILDSI-VVAPHLKGSRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+G+G G PGI +I + L++S K+ FLR V
Sbjct: 72 VGTGPGLPGIPLAIVMPDAH---FTLLDSLGKRVRFLRQV 108
>gi|87309120|ref|ZP_01091257.1| probable glucose inhibited division protein B (GidB)
[Blastopirellula marina DSM 3645]
gi|87288111|gb|EAQ80008.1| probable glucose inhibited division protein B (GidB)
[Blastopirellula marina DSM 3645]
Length = 228
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGSGGGFPGI 87
L+ + + + ++ +NL + + F R V DSL + QL P I +DLGSGGG PG+
Sbjct: 37 LDKYAQIVWEMNQSLNLTRHTDYDKFVARDVLDSLALAGQLKPGDEI-LDLGSGGGVPGV 95
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I +I ++ V+L +S KKA L +V + V+ R ++ + ++
Sbjct: 96 IIAILRPDVQ---VSLCDSVTKKAKALEEIVHRAGLSIPVYHARAEDLLEDFRYHAIV-C 151
Query: 148 RALADLDTLLEYSFP 162
RA+A L LL + P
Sbjct: 152 RAVAPLKKLLTWLAP 166
>gi|312130642|ref|YP_003997982.1| 16S rRNA m(7)g-527 methyltransferase [Leadbetterella byssophila DSM
17132]
gi|311907188|gb|ADQ17629.1| 16S rRNA m(7)G-527 methyltransferase [Leadbetterella byssophila DSM
17132]
Length = 233
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 3 YCDSNSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ +N ++A+ + + ++ E ++ E L+ +W+ +IN++S ++ + RHV
Sbjct: 19 FVKNNGKVKADIIYKYFPELTEEQKDQFERLEDLYKEWNAQINVISRKDIDSLYERHVLH 78
Query: 62 SLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + ++ + S +D+G+GGGFPGI +I + LV+ + K K VVQ
Sbjct: 79 SLGIAKVCTFAPDSDVLDVGTGGGFPGIPLAILFPEVNFHLVDAVGKKIK-------VVQ 131
Query: 120 KTA-ARG-KVFACRIQEAPQMITTCDVISARALADLDTLL 157
+ A G K + ++ T D + +RA+ ++ +
Sbjct: 132 EVANGLGLKNVKAEHERVEKLRDTYDFVISRAVTRMEPFI 171
>gi|317050170|ref|YP_004117818.1| methyltransferase GidB [Pantoea sp. At-9b]
gi|316951787|gb|ADU71262.1| methyltransferase GidB [Pantoea sp. At-9b]
Length = 205
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 15 LLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
LL N+S +K + + L KW+K NL S + +RH+ DS+ V + H
Sbjct: 8 LLKAANISLSDQQKQQLVGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLQG 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ID+G+G G PGI +I L++S K+ FLR V + R
Sbjct: 67 ERFIDVGTGPGLPGIPLAIVRPQSH---FTLLDSLGKRVRFLRQVQHELGLTNVTPVQSR 123
Query: 132 IQEAPQMITTCDVISARALADLDTLLEY 159
++E P VIS RA A L+ ++ +
Sbjct: 124 VEEFPAEPPFDGVIS-RAFASLEDMVNW 150
>gi|13432164|sp|Q50203|RSMG_MYCLE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
Length = 245
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ +S V +L +D+GSG G PG+ +I ++ V L
Sbjct: 55 GLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPLAIARPDLQ---VVL 111
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSF 161
+E ++ +FLR VV + +V R +E I DV +RA+A LD L ++S
Sbjct: 112 LEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVSRAVAALDKLTKWSI 171
Query: 162 PWL 164
P L
Sbjct: 172 PLL 174
>gi|242241379|ref|YP_002989560.1| methyltransferase GidB [Dickeya dadantii Ech703]
gi|242133436|gb|ACS87738.1| methyltransferase GidB [Dickeya dadantii Ech703]
Length = 206
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQ 92
L KW+K NL S E IRH+ DSL V PY + +ID+G+G G PG+ SI
Sbjct: 30 LLHKWNKAYNLTSVREPEQMLIRHIMDSLVVA---PYLAGKRFIDVGTGPGLPGVPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + + R+++ P VIS RA A
Sbjct: 87 LPDAH---FVLLDSLGKRVRFLRQVQHELQLTNIEPVQSRVEDYPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L ++++
Sbjct: 143 SLQDMVDW 150
>gi|254526589|ref|ZP_05138641.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9202]
gi|221538013|gb|EEE40466.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9202]
Length = 237
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 25 TLEKLEYFYFLFLK---WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------W 75
T E++ F L +K + K NL +D+WI V DS+ F+ +P+I +
Sbjct: 15 TEEEINIFQELQIKIQELNNKTNLTRLIDGDDYWISQVFDSIWPFKA--FPNINFNNKKF 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--RIQ 133
+D+GSG GFPG+ +I + E + LI+S KK L+ ++++ + + R++
Sbjct: 73 LDIGSGCGFPGLAYAITHPNSE---IYLIDSSKKKTDALKILIKEINFKNNIHIINDRVE 129
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
M T ++ + RA+++ T+ EY P L ++
Sbjct: 130 NLAHRSSMRNTFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|302872908|ref|YP_003841544.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
gi|302575767|gb|ADL43558.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
Length = 238
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------HPYPSIWIDLGSGGGFP 85
F L+ +K NL + E+F ++H+ DSL + + + P + ID+GSG G P
Sbjct: 26 FMNFVLEKNKLFNLTAIEDEEEFVLKHIADSLSLIKFVEEECSNQNP-VAIDIGSGFGAP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITT 141
GI I + ++ + L +S KK +F+ V+ C E +
Sbjct: 85 GIFIKIAMPNMN---MFLNDSNKKKCNFMTEAVKMLGISSVNVVCERAEVLGKKEEFRER 141
Query: 142 CDVISARALADLDTLLEYSFPWL 164
D + ARA+ L+ L EY+ P L
Sbjct: 142 FDFVFARAVDSLNVLCEYALPLL 164
>gi|332531224|ref|ZP_08407137.1| 16S rRNA methyltransferase GidB [Hylemonella gracilis ATCC 19624]
gi|332039331|gb|EGI75744.1| 16S rRNA methyltransferase GidB [Hylemonella gracilis ATCC 19624]
Length = 225
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-----QLHPYPSIWIDLGSGGG 83
L+Y L KW+K NL + E+ H+ DS+ V Q P +D+GSG G
Sbjct: 34 LDYLA-LVQKWNKVYNLTALRDAEEMLTHHLLDSMAVIAPLRRQTQGQPVRLLDVGSGAG 92
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--VQKTAARGKVFACRIQEAPQMITT 141
PG++ +I I+ V +++ KKA+F++ V K V A R++ +
Sbjct: 93 LPGVVIAICCPEID---VTCVDTVAKKATFIQQVAIALKLPHLHGVHA-RVES---LSGP 145
Query: 142 CDVISARALADLDTLLEYSF 161
DV+S+RA A L +SF
Sbjct: 146 FDVVSSRAFASLADFTAWSF 165
>gi|315637202|ref|ZP_07892423.1| methyltransferase GidB [Arcobacter butzleri JV22]
gi|315478508|gb|EFU69220.1| methyltransferase GidB [Arcobacter butzleri JV22]
Length = 194
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E E F L +W NL T +D + ++ DSL + D+G+G G+PG
Sbjct: 19 EDCEVFVKLLQQWGTIHNLSGRLTRDDIY-ENILDSLYPLTFIEKYESFADIGTGAGYPG 77
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQMITTCDVI 145
+I +I L + LIE + K+ SFL +V V C R++E + D+I
Sbjct: 78 LILAIALRDTKAY---LIEPRIKRVSFLNFVKATLKLDNLVVLCNRVEEVKDL--HVDLI 132
Query: 146 SARALADLDTLLE 158
++RA+ + LL+
Sbjct: 133 TSRAVTNTSLLLD 145
>gi|150024517|ref|YP_001295343.1| glucose-inhibited division protein B [Flavobacterium psychrophilum
JIP02/86]
gi|189039390|sp|A6GWQ2|RSMG_FLAPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149771058|emb|CAL42525.1| Methyltransferase GidB [Flavobacterium psychrophilum JIP02/86]
Length = 209
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
N+ EKLE Y W+ KIN++S +++ + +HV SL + ++ + + +D
Sbjct: 13 NLQITQFEKLEALY---QDWNAKINVISRKDIDELYTKHVLHSLAIAKIQKFEAGTYVLD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--A 135
+G+GGGFPGI +I L+++I K K VVQ A ++ + ++ A
Sbjct: 70 VGTGGGFPGIPLAILFPETRFYLIDVILKKIK-------VVQAVAEALELKNVKAEQIRA 122
Query: 136 PQMITTCDVISARALADL 153
+ D I +RA+ ++
Sbjct: 123 ENVKGDFDFIVSRAVTNM 140
>gi|146297754|ref|YP_001181525.1| methyltransferase GidB [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|189039490|sp|A4XN49|RSMG_CALS8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145411330|gb|ABP68334.1| 16S rRNA m(7)G-527 methyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 253
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 13 NYLLNTYNVSRETL--EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQ 67
+ +L Y++ ++ E L F L L+ +K NL + ++F I+H+ DSL R Q
Sbjct: 20 DRVLEFYSIKNSSVVKELLLRFMKLVLEKNKHFNLTAIENEDEFVIKHIADSLSLIRFLQ 79
Query: 68 LHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+GSG G PGI I SI LV L +S KK +F+ G
Sbjct: 80 NSDGKLVRAVDIGSGFGVPGIPVKIAKPSI--SLV-LNDSNKKKCNFMNEAKDHLGLSGI 136
Query: 127 VFAC-RIQEAPQMI---TTCDVISARALADLDTLLEYSFPWL 164
C R +E + + + D ARA+ L+ L EY+ P L
Sbjct: 137 EVVCQRAEELGKEVEFRESFDFAFARAVDKLNVLCEYALPLL 178
>gi|15828466|ref|NP_302729.1| 16S rRNA methyltransferase GidB [Mycobacterium leprae TN]
gi|221230943|ref|YP_002504359.1| 16S rRNA methyltransferase GidB [Mycobacterium leprae Br4923]
gi|254766899|sp|B8ZTN3|RSMG_MYCLB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13093896|emb|CAC32240.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219934050|emb|CAR72808.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 248
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ +S V +L +D+GSG G PG+ +I ++ V L
Sbjct: 58 GLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPLAIARPDLQ---VVL 114
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSF 161
+E ++ +FLR VV + +V R +E I DV +RA+A LD L ++S
Sbjct: 115 LEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVSRAVAALDKLTKWSI 174
Query: 162 PWL 164
P L
Sbjct: 175 PLL 177
>gi|328883708|emb|CCA56947.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Streptomyces venezuelae ATCC 10712]
Length = 246
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 15/144 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E + Y L K+ L+ V W RH+ + + ++ P D+GSG G PG
Sbjct: 32 EAVRYAELLADAGVKR-GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPG 90
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMIT 140
I ++ ++ + L+E ++ +FL+ VV+ T RG R +E IT
Sbjct: 91 IPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRG-----RAEEMLGKIT 142
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
V++ARA+A LD L + P L
Sbjct: 143 PVHVVTARAVAPLDRLAGWGVPLL 166
>gi|328905778|gb|EGG25554.1| 16S rRNA methyltransferase GidB [Propionibacterium sp. P08]
Length = 210
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RHV +S + L P D+GSG G PGI +I +E + L
Sbjct: 36 GLIGPREIGKLWERHVLNSAALENLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MTL 92
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
IE +++ FL V++ +V R A D++ +RA+A L TL+E++
Sbjct: 93 IEPMLRRSDFLNETVEELGLDDRVTVVR-SRAENAGLDVDIVVSRAVAKLATLIEWT 148
>gi|78189778|ref|YP_380116.1| 16S rRNA methyltransferase GidB [Chlorobium chlorochromatii CaD3]
gi|123579260|sp|Q3APK2|RSMG_CHLCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78171977|gb|ABB29073.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium chlorochromatii
CaD3]
Length = 234
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
++ E ++KL + L +W+ KINL+S I+H+ SL + Q H + + +DL
Sbjct: 36 LAPEMVDKLVEYGRLLEEWNNKINLISRKEDAPIIIKHIFHSLLITQHHTFQTGEKVLDL 95
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGG PGI +I L+++ KK + + ++ T V A ++
Sbjct: 96 GTGGGLPGIPLAIIAPQ---ATFLLVDATGKKITACQEMI-ATLKLTNVTARHLRVEELH 151
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
T I +R +A L+ L Y P L++K
Sbjct: 152 GETFHTIVSRQVALLNKLCAYGEPLLHEK 180
>gi|85060384|ref|YP_456086.1| glucose-inhibited division protein B [Sodalis glossinidius str.
'morsitans']
gi|123518618|sp|Q2NQ94|RSMG_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84780904|dbj|BAE75681.1| glucose inhibited division protein B [Sodalis glossinidius str.
'morsitans']
Length = 206
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EKL + L KW+K NL S + E +RH+ DS+ V H +ID+G+G G PG
Sbjct: 22 EKLLGYVALLHKWNKAYNLTSVRSPEQMLVRHIMDSI-VVNPHLRGDRFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
I +I L++S K+ FLR V
Sbjct: 81 IPLAIVRPDAH---FTLLDSLGKRICFLRQV 108
>gi|262039021|ref|ZP_06012355.1| 16S rRNA methyltransferase GidB [Leptotrichia goodfellowii F0264]
gi|261746931|gb|EEY34436.1| 16S rRNA methyltransferase GidB [Leptotrichia goodfellowii F0264]
Length = 234
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLGS 80
++ +EK+ F L + +K +NL + ++ +H DSL + ++ +ID+G+
Sbjct: 20 EKDKIEKMLQFSELLYEKNKFMNLTAIRDKKEIIEKHFIDSLLLTKIIKEDEKKFIDVGT 79
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQM 138
G GFPG++ SI E LV+ S KK F+ V++K + K + R +E
Sbjct: 80 GAGFPGLVLSIYYPEKEFLLVD---SVRKKVEFINEVIEKLDLKNVKTSSERAEELIKNK 136
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ D R +A+L +LEY P+L
Sbjct: 137 RESFDTALCRGVANLRIILEYMIPFL 162
>gi|313835184|gb|EFS72898.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA2]
gi|314929156|gb|EFS92987.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL044PA1]
gi|314970894|gb|EFT14992.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA3]
Length = 223
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RHV +S + L P D+GSG G PGI +I +E + L
Sbjct: 49 GLIGPREIGKLWERHVLNSAALENLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MTL 105
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
IE +++ FL V++ +V R A D++ +RA+A L TL+E++
Sbjct: 106 IEPMLRRSDFLNETVEELGLDDRVTVVR-SRAENAGLDVDIVVSRAVAKLATLIEWT 161
>gi|21618112|gb|AAM67162.1| glucose-inhibited division protein B-like protein [Arabidopsis
thaliana]
Length = 196
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 57 RHVEDSLRV-------FQLHP---YPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
RH+EDSL + + LH + I ID+GSG G PG++ +I V L+E
Sbjct: 3 RHIEDSLAILPPIKTCYNLHSSDLFDHINLIDVGSGAGLPGLVLAIACPDWR---VTLLE 59
Query: 106 SKNKKASFLRYVVQKTA------ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
S NK+ FL +VV T RG+ +C DV ARA+A++ L EY
Sbjct: 60 SINKRCVFLEHVVNVTGLTNVTIVRGRAESC--GHDVMYREKFDVAIARAVAEMRVLAEY 117
Query: 160 SFPWL 164
P +
Sbjct: 118 CLPLV 122
>gi|886320|gb|AAB53136.1| glucose-inhibited division protein B [Mycobacterium leprae]
Length = 252
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ +S V +L +D+GSG G PG+ +I ++ V L
Sbjct: 55 GLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPLAIARPDLQ---VVL 111
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSF 161
+E ++ +FLR VV + +V R +E I DV +RA+A LD L ++S
Sbjct: 112 LEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVSRAVAALDKLTKWSI 171
Query: 162 PWL 164
P L
Sbjct: 172 PLL 174
>gi|33862031|ref|NP_893592.1| putative glucose inhibited division protein B [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|55976486|sp|Q7V016|RSMG_PROMP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33634249|emb|CAE19934.1| putative glucose inhibited division protein B [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 239
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WIDLGSGGGFPGIITSIQLSSIE 97
K NL +D+WI V DSL F+ + + +ID+GSG GFPG +I + E
Sbjct: 35 KTNLTRLIEGDDYWISQVYDSLWTFKENTNKNFDNKKFIDIGSGCGFPGFAYAITHPNSE 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-----RIQEAPQMITTCDVISARALAD 152
+ L++S KK L+ +++ + +F I ++ +ARA+++
Sbjct: 95 ---IYLVDSSKKKTDSLKEIIKSIKFKNDIFVINDRIENIGRQSSFKNGFNIATARAVSN 151
Query: 153 LDTLLEYSFPWL 164
T+ EY P L
Sbjct: 152 PSTVSEYILPML 163
>gi|303272167|ref|XP_003055445.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463419|gb|EEH60697.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 214
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 31/143 (21%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------------------IDLGSGGGF 84
+NL ++TV++ RHV DSL + P I +D+GSG GF
Sbjct: 1 MNLTGATTVDEVLSRHVADSLALI-----PPIEAALASSTTSSSPSHTPRILDVGSGAGF 55
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT--- 140
PG+ +I E V L+++ K+ +FL ++ A K R ++A ++ +
Sbjct: 56 PGVALAIARPRWE---VTLLDTLQKRVAFLDAAAEECGATNVKTLWSRAEDAGKVGSEHR 112
Query: 141 -TCDVISARALADLDTLLEYSFP 162
D+++ARA+A+L TL E P
Sbjct: 113 EAYDIVTARAVAELRTLAELCVP 135
>gi|225377576|ref|ZP_03754797.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
gi|225210552|gb|EEG92906.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
Length = 197
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Query: 43 INLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+NL + + ++ +H DSL +V+ L S+ +D+G+G GFPGI I ++
Sbjct: 1 MNLTAITEFDEVIEKHFLDSLSLIKVYDLQKEVSV-MDMGTGAGFPGIPLKIAFPNLR-- 57
Query: 100 LVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMITTCDVISARALADLDT 155
+ L +S NK+ FL+ V++K + R +E + D++ +RA+A+L +
Sbjct: 58 -MTLADSLNKRILFLQEVIEKLGLKDIDALHARAEELGKNKEYREKFDLVVSRAVANLSS 116
Query: 156 LLEYSFPWL 164
L EY P++
Sbjct: 117 LEEYCVPFV 125
>gi|271970550|ref|YP_003344746.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division-like protein [Streptosporangium roseum DSM
43021]
gi|270513725|gb|ACZ92003.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division-like protein [Streptosporangium roseum DSM
43021]
Length = 236
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+ E F L L+ V W RH+ + V + P +D+GSG G PG+
Sbjct: 23 RAETFAELLAGPGVVRGLLGPREVPRIWDRHLLNCAVVAEAVPADVRLVDIGSGAGLPGL 82
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVFACRIQEAPQMI 139
+ +I I V L+E ++ FL V+ R + FA R +
Sbjct: 83 VLAIVRPDI---TVTLLEPLLRRTVFLEECVEALKLDNVEVLRGRAEEFAGRRE------ 133
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
DV SARA+A L+ LL++S P L +
Sbjct: 134 --FDVASARAVAPLERLLKWSLPLLRE 158
>gi|313472996|ref|ZP_07813483.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
gi|313448827|gb|EEQ67802.2| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
Length = 264
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 81/157 (51%), Gaps = 18/157 (11%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--- 75
+ ++++ +++ +Y ++ ++ +NL + +E+ +++H DSL F YP ++
Sbjct: 15 FALNQKQIDQFSKYYKKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPFL--EYPDLFKKG 72
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKV 127
D+G+G GFP I I + ++ + +++S NK+ FL + Q G+
Sbjct: 73 HICDVGAGAGFPSIPIKILVPEMQ---LAIVDSLNKRLKFLADLTADLDLEQVELIHGR- 128
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + + + D+++ARA+A++ TL EY P +
Sbjct: 129 -AEDVGQNEKYREKFDLVTARAVANMATLSEYCLPLV 164
>gi|291565702|dbj|BAI87974.1| putative glucose inhibited division protein B [Arthrospira
platensis NIES-39]
Length = 254
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIW 75
S L+ Y L ++++NL + FW +H+ DSLR + P+ P
Sbjct: 26 SDRQLQIFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLR--GVAPWLSGDKLPLRV 83
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI +I + E V L++S KK +FL+ +V + + + R++
Sbjct: 84 IDIGTGAGFPGIPIAIAIPQAE---VTLLDSTGKKIAFLQTLVPRLGLENAIPYLGRVEA 140
Query: 135 APQMI---TTCDVISARALADLDTLLEYSFPWL 164
Q T D++ RA+A EYS P L
Sbjct: 141 IAQQSDHRQTYDLVVLRAVAAATVAAEYSLPLL 173
>gi|190576401|ref|YP_001974246.1| 16S rRNA methyltransferase GidB [Stenotrophomonas maltophilia
K279a]
gi|229890174|sp|B2FNF9|RSMG_STRMK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190014323|emb|CAQ47970.1| putative glucose inhibited division protein B [Stenotrophomonas
maltophilia K279a]
Length = 212
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPG 86
L Y L +W+ NL + ++ RH+ DSL + P+ DLG+G G PG
Sbjct: 32 LRYLALLH-RWNGTYNLTAIRDPQEMVTRHLLDSL---AMQPFVADGSLADLGTGPGLPG 87
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I +I ++ V L+ES KKA F+R V++ A EA D ++
Sbjct: 88 IPLAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGRYDQLT 144
Query: 147 ARALADLDTL 156
ARA +DTL
Sbjct: 145 ARA---MDTL 151
>gi|148653200|ref|YP_001280293.1| 16S rRNA methyltransferase GidB [Psychrobacter sp. PRwf-1]
gi|189040712|sp|A5WFA2|RSMG_PSYWF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148572284|gb|ABQ94343.1| methyltransferase GidB [Psychrobacter sp. PRwf-1]
Length = 225
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
W+K NL + ++ I+HV D L + H P +D+G+G G PG+I +I
Sbjct: 50 WNKAYNLTAIKQPKEALIKHVIDCLAILP-HLKPGKLLDIGTGAGLPGVIVAICEPERP- 107
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE-APQMITTCDVISARALADLDTL 156
+ +++S KK F+R + + A RI+ P V+++RA A L
Sbjct: 108 --ITVLDSNQKKIRFIRQSISELQVTNVTPVASRIENFNPDEGDKFAVVTSRAFASLTDF 165
Query: 157 LEYSFPWLYQ 166
+E + P L Q
Sbjct: 166 VEAAAPRLAQ 175
>gi|283787571|ref|YP_003367436.1| glucose inhibited division protein [Citrobacter rodentium ICC168]
gi|282951025|emb|CBG90703.1| glucose inhibited division protein [Citrobacter rodentium ICC168]
Length = 207
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
+ KW+K NL S ++ +RH+ DS+ V H + +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPDEMLVRHILDSI-VVAPHLHGERFIDVGTGPGLPGIPLSIVRP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADL 153
L++S K+ FLR V + A + R++ P VIS RA A L
Sbjct: 89 ESH---FTLLDSLGKRVRFLRQVQHELALKNITPVQSRVEAFPAEPPFDGVIS-RAFASL 144
Query: 154 DTLLEY 159
+ ++ +
Sbjct: 145 NDMVNW 150
>gi|255535483|ref|YP_003095854.1| Ribosomal RNA small subunit methyltransferase G [Flavobacteriaceae
bacterium 3519-10]
gi|255341679|gb|ACU07792.1| Ribosomal RNA small subunit methyltransferase G [Flavobacteriaceae
bacterium 3519-10]
Length = 211
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWID 77
+S E + E L+ +W++KIN++S ++ + +H+ SL +V Q P + +D
Sbjct: 13 LSAEQKNQFEKLDGLYREWNEKINVISRKDMDSLYEKHILHSLGIAKVMQFAPGTQV-LD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+G+GGGFPGI +I ++ LI+S KK + ++ V + +
Sbjct: 72 IGTGGGFPGIPLAILFPQVQ---FTLIDSIGKKITVVKEVSEGVGLK 115
>gi|291615446|ref|YP_003525603.1| methyltransferase GidB [Sideroxydans lithotrophicus ES-1]
gi|291585558|gb|ADE13216.1| methyltransferase GidB [Sideroxydans lithotrophicus ES-1]
Length = 207
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
V+ E KL + L KW+ NL + E H+ DSL V PY P W+D
Sbjct: 17 EVTPEQQVKLLDYLALLQKWNGVYNLTAIRQPEQMVSNHLLDSLAVL---PYLWPRRWLD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G GGG PGI+ ++ L++S +KK F++ + + C E Q
Sbjct: 74 VGCGGGLPGIVLAVMRPEWS---FTLLDSNSKKIGFIQQAAIELDLQNVEVRCERVEQWQ 130
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ D I +RA A++ + S
Sbjct: 131 VQQKFDGIISRAFAEVADFVRLS 153
>gi|254524201|ref|ZP_05136256.1| methyltransferase GidB [Stenotrophomonas sp. SKA14]
gi|219721792|gb|EED40317.1| methyltransferase GidB [Stenotrophomonas sp. SKA14]
Length = 212
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPG 86
L Y L +W+ NL + ++ RH+ DSL + P+ DLG+G G PG
Sbjct: 32 LRYLALLH-RWNGTYNLTAIRDPQEMVTRHLLDSL---AMQPFVADGSLADLGTGPGLPG 87
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I +I ++ V L+ES KKA F+R V++ A EA D ++
Sbjct: 88 IPLAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGRYDQLT 144
Query: 147 ARALADLDTL 156
ARA +DTL
Sbjct: 145 ARA---MDTL 151
>gi|313205880|ref|YP_004045057.1| 16S rRNA m(7)g-527 methyltransferase [Riemerella anatipestifer DSM
15868]
gi|312445196|gb|ADQ81551.1| 16S rRNA m(7)G-527 methyltransferase [Riemerella anatipestifer DSM
15868]
gi|315022192|gb|EFT35220.1| Ribosomal RNA small subunit methyltransferase G [Riemerella
anatipestifer RA-YM]
gi|325336680|gb|ADZ12954.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Riemerella anatipestifer
RA-GD]
Length = 211
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQ 92
L+ +W++KIN++S + + +H+ SL + ++ P+ + +D+G+GGGFPGI +I
Sbjct: 27 LYKEWNEKINVISRKDTDSLYEKHILHSLGIAKVMPFSEGTKVLDIGTGGGFPGIPLAIM 86
Query: 93 LSSIEGGLVNLIESKNK 109
+E L++ I K K
Sbjct: 87 FPEVEFTLIDSIGKKIK 103
>gi|324993451|gb|EGC25371.1| glucose inhibited division protein B [Streptococcus sanguinis
SK405]
gi|327461725|gb|EGF08056.1| glucose inhibited division protein B [Streptococcus sanguinis SK1]
gi|327473446|gb|EGF18866.1| glucose inhibited division protein B [Streptococcus sanguinis
SK408]
gi|327489010|gb|EGF20805.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1058]
Length = 237
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E+++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFEHYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQALIDNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQNKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|297184150|gb|ADI20269.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 216
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQ 92
L+ +W+ KIN++S +E F+ +HV SL + +++ + S +D+G+GGGFPGI +I
Sbjct: 28 LYTEWNAKINVISRKDMESFYEKHVLHSLGIAKVYSFKSGQKVLDVGTGGGFPGIPLAIL 87
Query: 93 LSSIEGGLVNLIESKNK 109
+ LV+ I K K
Sbjct: 88 FPETQFHLVDSIGKKIK 104
>gi|227506192|ref|ZP_03936241.1| glucose-inhibited division protein B [Corynebacterium striatum ATCC
6940]
gi|227197216|gb|EEI77264.1| glucose-inhibited division protein B [Corynebacterium striatum ATCC
6940]
Length = 169
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
V W RH+ + + ++ P + ID+GSG G PGI +I ++ + LIE K+
Sbjct: 6 VPRLWDRHILNCAVIGEVMPEGARVIDVGSGAGLPGIPLAIARPDLD---ITLIEPLLKR 62
Query: 111 ASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYSFPWL 164
+++L V + V R +E P + + D++++RA+A L L ++S P +
Sbjct: 63 SNYLLEVKEMLGLDNVTVIRGRAEEGPVKKAVKGADIVTSRAVAPLGKLAKWSLPLV 119
>gi|241766012|ref|ZP_04763933.1| methyltransferase GidB [Acidovorax delafieldii 2AN]
gi|241364011|gb|EER59267.1| methyltransferase GidB [Acidovorax delafieldii 2AN]
Length = 225
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIW- 75
+ +++++ + +L F L KW+K NL + ++ H+ DSL V L + +
Sbjct: 22 SLDLNQDQITRLMEFLALLQKWNKVYNLTAVRNPQEMVTHHLLDSLAAVVPLRRHVATLG 81
Query: 76 ---------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+D+GSGGG PG++ +I ++ V+ +++ KKA+F++ R
Sbjct: 82 QGGAQAVRLLDVGSGGGLPGVVFAICCPGVD---VSCVDTVGKKAAFIQQAAVALKLRNL 138
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++ + T D+IS RA A L + +S
Sbjct: 139 HGVHARVET---LTTPFDIISCRAFASLPDFVAWS 170
>gi|285016924|ref|YP_003374635.1| methyltransferase gidb (glucose-inhibited division protein b)
[Xanthomonas albilineans GPE PC73]
gi|283472142|emb|CBA14649.1| probable methyltransferase gidb (glucose-inhibited division protein
b) [Xanthomonas albilineans]
Length = 213
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
+W++ NL + + RH+ DSL + P+ + DLG+G G PG+ +I
Sbjct: 41 RWNRTYNLTAIRDPHEMVTRHLLDSL---AMQPFVGEGVLADLGTGPGLPGLPLAIARPH 97
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+ V L+ES KKA FLR V++ A EA D+++ARA LDT
Sbjct: 98 LH---VTLVESNGKKARFLREAVRQLRLDNARVAETRAEALDEPGGYDLLTARA---LDT 151
Query: 156 L 156
L
Sbjct: 152 L 152
>gi|52082646|ref|YP_081437.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis ATCC 14580]
gi|52788045|ref|YP_093874.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis ATCC 14580]
gi|319648512|ref|ZP_08002728.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
gi|81608802|sp|Q65CN3|RSMG_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52005857|gb|AAU25799.1| glucose-inhibited division protein [Bacillus licheniformis ATCC
14580]
gi|52350547|gb|AAU43181.1| GidB [Bacillus licheniformis ATCC 14580]
gi|317389591|gb|EFV70402.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
Length = 239
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGG 83
LE+ E +Y ++W++K+NL S + ++ +++H DS+ + + D+G+G G
Sbjct: 22 LEQFETYYEWLVEWNEKMNLTSITEKKEVYLKHFYDSIAASFYVDFKKMNTLCDVGAGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQMI 139
FP + I + V +++S NK+ FL + F A +
Sbjct: 82 FPSLPIKICFPHLH---VTIVDSLNKRIHFLNQLSDALKLENTAFYHDRAETFGRSKDHR 138
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
+ DV++ARA+A L L E P +
Sbjct: 139 ESYDVVTARAVARLSVLSELCLPLV 163
>gi|312136218|ref|YP_004003556.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
gi|311776269|gb|ADQ05756.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
Length = 238
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGGFPGIIT 89
L LK +K NL + E F I+H+ DSL + + + ID+GSG G PG++
Sbjct: 29 LVLKKNKLFNLTAIEDEEGFVIKHIADSLSLLKFIEEEDSGKNPVAIDIGSGFGVPGLVL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE----APQMITTCDVI 145
I SI V L +S KK +F+ + G C E D
Sbjct: 89 KIAKPSI---TVFLNDSNRKKCNFMMEAKESLGIAGVEVICDRAENLGRKEVFRERFDFA 145
Query: 146 SARALADLDTLLEYSFPWL 164
ARA+ L+ L EY+ P L
Sbjct: 146 FARAVDKLNVLCEYAIPLL 164
>gi|160872231|ref|ZP_02062363.1| methyltransferase GidB [Rickettsiella grylli]
gi|159121030|gb|EDP46368.1| methyltransferase GidB [Rickettsiella grylli]
Length = 214
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 26/136 (19%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PS 73
N + VS++T ++L + L KW++ NL S +H+ DSL + PY P
Sbjct: 18 NRFEVSKKTSQQLVDYVLLLHKWNQIHNLTSIRNPLQMLSKHIMDSLAI---SPYLRGPH 74
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
I +D+G+G G PG+ ++ L++S KK FL Y++Q
Sbjct: 75 I-LDVGTGAGLPGLPLALTHPHYH---FTLLDSNGKKTRFLTYILQTL------------ 118
Query: 134 EAPQMITTCDVISARA 149
MI+ D+IS R
Sbjct: 119 ----MISNVDIISLRV 130
>gi|296113034|ref|YP_003626972.1| methyltransferase GidB [Moraxella catarrhalis RH4]
gi|295920728|gb|ADG61079.1| methyltransferase GidB [Moraxella catarrhalis RH4]
gi|326571191|gb|EGE21215.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis BC7]
Length = 225
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWIDLG 79
+ ++ L Y L L W K NL + + ++ ++H+ D + + + P+ + +D+G
Sbjct: 34 QNMQILRYLDGLLL-WGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNKSLLDIG 92
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-EAPQ 137
+G G P +I +I ++ ++S KK F+R + + + A RI+ Q
Sbjct: 93 TGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNITPIASRIEHHHAQ 149
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
T DVI++RA A L + + P L
Sbjct: 150 KAGTYDVITSRAFASLTDFVSLATPCL 176
>gi|238854396|ref|ZP_04644738.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260665089|ref|ZP_05865939.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
gi|282931800|ref|ZP_06337285.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|238833018|gb|EEQ25313.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260561143|gb|EEX27117.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
gi|281304107|gb|EFA96224.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
Length = 239
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 81/157 (51%), Gaps = 18/157 (11%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--- 75
+ ++++ +++ +Y ++ ++ +NL + +E+ +++H DSL F YP ++
Sbjct: 15 FALNQKQIDQFSKYYKKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPFL--EYPDLFKKG 72
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKV 127
D+G+G GFP I I + ++ + +++S NK+ FL + Q G+
Sbjct: 73 HICDVGAGAGFPSIPIKILVPEMQ---LAIVDSLNKRLKFLADLTADLDLEQVELIHGR- 128
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + + + D+++ARA+A++ TL EY P +
Sbjct: 129 -AEDVGQNEKYREKFDLVTARAVANMATLSEYCLPLV 164
>gi|326573109|gb|EGE23078.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis CO72]
Length = 225
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWIDLG 79
+ ++ L Y L L W K NL + + ++ ++H+ D + + + P+ + +D+G
Sbjct: 34 QNMQILRYLDGLLL-WGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNKSLLDIG 92
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-EAPQ 137
+G G P +I +I ++ ++S KK F+R + + + A RI+ Q
Sbjct: 93 TGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNITPIASRIEHHHAQ 149
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
T DVI++RA A L + + P L
Sbjct: 150 KAGTYDVITSRAFASLTDFVSLATPCL 176
>gi|116490228|ref|YP_809772.1| cell division SAM-dependent methyltransferase [Oenococcus oeni
PSU-1]
gi|290889610|ref|ZP_06552700.1| hypothetical protein AWRIB429_0090 [Oenococcus oeni AWRIB429]
gi|122277581|sp|Q04HG5|RSMG_OENOB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116090953|gb|ABJ56107.1| 16S rRNA m(7)G-527 methyltransferase [Oenococcus oeni PSU-1]
gi|290480808|gb|EFD89442.1| hypothetical protein AWRIB429_0090 [Oenococcus oeni AWRIB429]
Length = 242
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWIDLGSGGGFPGI 87
Y FL L++SKK+NL + +D W++H DSL P + ID+GSG GFPG+
Sbjct: 28 YLEFL-LEYSKKVNLTAIKEPKDIWLKHFYDSLTPLLYLPDMNKKASLIDIGSGAGFPGV 86
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFACRIQEAPQMI 139
I + + L++S K+ +FL ++ K R + FA + +
Sbjct: 87 PLKIVNQKFQ---LTLLDSLQKRIAFLDQLIDKLNLKNVETVHGRAEDFAHNLNYREK-- 141
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D ARA+++ +TLLE P++
Sbjct: 142 --YDFAIARAVSNTNTLLELLLPFV 164
>gi|118586485|ref|ZP_01543929.1| glucose-inhibited division protein GidB [Oenococcus oeni ATCC
BAA-1163]
gi|118433049|gb|EAV39771.1| glucose-inhibited division protein GidB [Oenococcus oeni ATCC
BAA-1163]
Length = 242
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWIDLGSGGGFPGI 87
Y FL L++SKK+NL + +D W++H DSL P + ID+GSG GFPG+
Sbjct: 28 YLEFL-LEYSKKVNLTAIKEPKDIWLKHFYDSLTPLLYLPDMNKKASLIDIGSGAGFPGV 86
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFACRIQEAPQMI 139
I + + L++S K+ +FL ++ K R + FA + +
Sbjct: 87 PLKIVNQKFQ---LTLLDSLQKRIAFLDQLIDKLNLKNVETVHGRAEDFAHNLNYREK-- 141
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D ARA+++ +TLLE P++
Sbjct: 142 --YDFAIARAVSNTNTLLELLLPFV 164
>gi|194367739|ref|YP_002030349.1| 16S rRNA methyltransferase GidB [Stenotrophomonas maltophilia
R551-3]
gi|238693455|sp|B4SNP6|RSMG_STRM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194350543|gb|ACF53666.1| methyltransferase GidB [Stenotrophomonas maltophilia R551-3]
Length = 212
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPG 86
L Y L +W+ NL + ++ RH+ DSL + P+ DLG+G G PG
Sbjct: 32 LRYLALLH-RWNGTYNLTAIRDPQEMVTRHLLDSL---AMQPFVADGSLADLGTGPGLPG 87
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I +I ++ V L+ES KKA F+R V++ A EA D ++
Sbjct: 88 IPLAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGHYDQLT 144
Query: 147 ARALADLDTL 156
ARA +DTL
Sbjct: 145 ARA---MDTL 151
>gi|313635557|gb|EFS01770.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL N1-067]
Length = 238
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + + SI D
Sbjct: 17 LSEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSIC-D 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I +E V++++S K+ +FL + +K A F A
Sbjct: 76 VGAGAGFPSIPIKICFPHLE---VSIVDSLKKRMTFLDALAEKLALTNVHFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 133 QNKAHRERYDLVTARAVARMSVLSELCLPLV 163
>gi|85712597|ref|ZP_01043644.1| glucose-inhibited division protein B [Idiomarina baltica OS145]
gi|85693588|gb|EAQ31539.1| glucose-inhibited division protein B [Idiomarina baltica OS145]
Length = 215
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS E + KL L KW+K NL S + +H+ DSL V H +ID+G+
Sbjct: 22 VSDEQVVKLVQLVELLDKWNKAYNLTSVRDPNEMLTKHIIDSLVVMP-HLKGEQFIDVGT 80
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
G G PG+ +I + E L++S K+ F+R V + R++ +
Sbjct: 81 GPGLPGLPLAICMPHCE---FVLLDSLGKRIRFIRQVCHELNIENVTAVQSRVEAYDSRL 137
Query: 140 TTCDVISARALADLDTLLEY 159
D + +RA A L+ +L +
Sbjct: 138 HDFDGVLSRAFASLNDMLSW 157
>gi|188587517|ref|YP_001919062.1| methyltransferase GidB [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179352204|gb|ACB86474.1| methyltransferase GidB [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 250
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSGGGFPGIITSIQ 92
L W+KK NL +++ + ++ H DSL + + Y ++ +DLGSG GFPG+ +
Sbjct: 43 LLDWNKKFNLTRTTSDQGIYLEHFLDSLIPLKYTIIDDYETM-LDLGSGPGFPGLPLKLA 101
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MITTCDVISAR 148
I+ L+ES KK FL+ +++K +V+ R +E ++ R
Sbjct: 102 KPGIK---TCLLESNFKKVRFLKALIRKLEIPEIEVYHVRAEELAHDQLHRNGYSLVVNR 158
Query: 149 ALADLDTLLEYSFPWL 164
A++ L+ + E S P+L
Sbjct: 159 AVSSLNVVSEISLPFL 174
>gi|218885951|ref|YP_002435272.1| glucose inhibited division protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756905|gb|ACL07804.1| glucose inhibited division protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 258
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------LRVFQLHPYPS 73
+V + L + L +KW++ +NLV + T + + + DS LR L P
Sbjct: 26 SVPEAAQKSLAGYLELLMKWNRVMNLVGTHTWQATFRTLIVDSLHLARFLRTLPLPEAPE 85
Query: 74 IWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR 131
W DLG+G G PG I L ++ + G +L++++ K+ FL V+ + G VF R
Sbjct: 86 TW-DLGAGAGLPG----IPLRAVWQAGTYHLVDAREKRTLFLSNVLARHPLPGTVVFRGR 140
Query: 132 IQEAPQMITTCDVISARALADLDTLLE 158
++E D + +RA +LE
Sbjct: 141 VEEFMPTRPKADCVVSRAFLPWPEVLE 167
>gi|240950031|ref|ZP_04754339.1| glucose-inhibited division protein B [Actinobacillus minor NM305]
gi|240295509|gb|EER46252.1| glucose-inhibited division protein B [Actinobacillus minor NM305]
Length = 205
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ N+S +K + F+ L KW+K NL S ++ ++H+ DSL V Q
Sbjct: 4 KLDRLLSQANISLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDSLVVSQ- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H +ID+G+G G PGI +I ++ + V L++S K+ +F++ +++
Sbjct: 63 HLQGQQFIDVGTGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNAIRELKLTNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
R++E + D + +RA A L+ ++++ +
Sbjct: 120 VLSRVEEYQEQ--QFDGVLSRAFASLNDMVDWCY 151
>gi|90023651|ref|YP_529478.1| glucose inhibited division protein B [Saccharophagus degradans
2-40]
gi|122995697|sp|Q21DG3|RSMG_SACD2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89953251|gb|ABD83266.1| methyltransferase GidB [Saccharophagus degradans 2-40]
Length = 223
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S + + +L + LF KW+K NL + E + +H+ DSL + H +ID+G+
Sbjct: 27 LSEQQVNQLLDYLELFEKWNKAYNLSAIRDAEGMFTKHLLDSLSIAP-HLTGERFIDVGT 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGG PGI +I L++S KK FL V Q R E Q
Sbjct: 86 GGGLPGIPMAICFPQRH---FTLLDSAGKKVRFLFQVKQALGLSNVDTQNRRVETFQPQP 142
Query: 141 TCDVISARALADLDTLL 157
D + +RA A + +L
Sbjct: 143 QFDGVISRAFASITYML 159
>gi|146284512|ref|YP_001174665.1| 16S rRNA methyltransferase GidB [Pseudomonas stutzeri A1501]
gi|166224605|sp|A4VS72|RSMG_PSEU5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145572717|gb|ABP81823.1| glucose inhibited division protein B [Pseudomonas stutzeri A1501]
Length = 215
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WIDLGSGGGFPGIITSIQ 92
+KW+K NL + ++ RH+ DSL V P+ + W+D+GSGGG PG+ +I
Sbjct: 39 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVV---PFVAERGRNWLDVGSGGGMPGVPLAIM 95
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
L++S KK FL V ++ A +V R+++ Q T D I++RA +
Sbjct: 96 FPERA---FTLLDSNGKKTRFLTQVKLELKLANLEVVHARVEQF-QPSTAFDGITSRAFS 151
Query: 152 DLDTLLEYS 160
L+ ++
Sbjct: 152 SLEDFASWT 160
>gi|187251663|ref|YP_001876145.1| methyltransferase GidB [Elusimicrobium minutum Pei191]
gi|186971823|gb|ACC98808.1| Methyltransferase GidB [Elusimicrobium minutum Pei191]
Length = 202
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 34 FLFLKWSKK--INLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWIDLGSGGGFPGI 87
++ L W KK +NL S S+ E+ W RH+ D L+ V L + D+GSG G+ G+
Sbjct: 26 YVDLVWDKKNSMNLTSVSSKEEIWGRHIADGLQFAKAVKDLGFEEGSFADIGSGAGYIGL 85
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-PQMITTCDVI 145
+I L LIES K+ FL + V K + + R +A P+ DV+
Sbjct: 86 AAAIALPKTNAA---LIESLEKRTIFLNWCVLKLDIKNVTILNERAGQAEPEQY---DVV 139
Query: 146 SARALADLDTLL 157
+ RA+ D +L
Sbjct: 140 TERAMGKFDDIL 151
>gi|78779952|ref|YP_398064.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9312]
gi|123553754|sp|Q318R7|RSMG_PROM9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78713451|gb|ABB50628.1| 16S rRNA m(7)G-527 methyltransferase [Prochlorococcus marinus str.
MIT 9312]
Length = 237
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------ 74
+++E + + + + K NL +D+WI V DS+ F+ +P+I
Sbjct: 14 ITKEEIVMFQELQIKIAELNNKTNLTRLIKGDDYWISQVFDSIWPFKT--FPNINFDNKK 71
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--RI 132
++D+GSG GFPG+ +I + E + LI+S KK L+ ++++ + + RI
Sbjct: 72 FLDIGSGCGFPGLAYAITHPNSE---IYLIDSSKKKTDALKLLIKEINFKNNIHIINDRI 128
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ M + ++ + RA+++ T+ EY P L ++
Sbjct: 129 ENLAHQSSMRNSFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|328945626|gb|EGG39777.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1087]
Length = 237
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 79/144 (54%), Gaps = 10/144 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGGF 84
+ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G GF
Sbjct: 24 QFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MIT 140
P + I ++ V +I+S NK+ +FL+ + ++ A + + R ++ Q T
Sbjct: 84 PSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEELALDKVHFYHGRAEDFAQDKAFRT 140
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 141 QFDLVTARAVARMQVLSELTIPYL 164
>gi|300702503|ref|YP_003744103.1| glucose-inhibited division protein b,
s-adenosyl-l-methionine-dependent methyltransferase
[Ralstonia solanacearum CFBP2957]
gi|299070164|emb|CBJ41455.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum CFBP2957]
Length = 226
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A ++ L++L + L KW++ NL + D H+ DSL
Sbjct: 10 ADARSELDAGARGLGLSLDAAQLDRLLAYQALLGKWNRVYNLTAIREAGDMLTHHLLDSL 69
Query: 64 --------RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RV ++ P +D+GSGGG PGI +I I +V++++ KK +FL
Sbjct: 70 AAVPRIAERVRRVQPEAPRVLDVGSGGGLPGIPLAIACPDIGVTMVDIVQ---KKTAFL 125
>gi|183985453|ref|YP_001853744.1| glucose-inhibited division protein B Gid [Mycobacterium marinum M]
gi|238690943|sp|B2HNT4|RSMG_MYCMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|183178779|gb|ACC43889.1| glucose-inhibited division protein B Gid [Mycobacterium marinum M]
Length = 228
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V+ W RHV +S + +L +D+GSG G PG+ +I ++ V L
Sbjct: 35 GLLGPREVDRLWERHVLNSAVIGELLDQGERVVDIGSGAGLPGLPLAIARPDLQ---VVL 91
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSF 161
+E ++ FL+ VV +V R +E + + D +RA+A LD L ++S
Sbjct: 92 LEPMLRRVEFLQEVVTDLGLAVEVVRGRAEERSVRERLGGSDAAVSRAVAALDKLTKWSM 151
Query: 162 PWLYQK 167
P L ++
Sbjct: 152 PLLKRE 157
>gi|94501612|ref|ZP_01308129.1| glucose-inhibited division protein B [Oceanobacter sp. RED65]
gi|94426295|gb|EAT11286.1| glucose-inhibited division protein B [Oceanobacter sp. RED65]
Length = 205
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S + +E L ++ L KW+K NL + +D RH+ DSL + H +D+G+
Sbjct: 17 LSDDKIELLLAYHGLLAKWNKAYNLTAVRDPQDMIGRHLLDSLSILP-HVEGERILDVGT 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL-RYVVQKTAARGKVFACRIQ--EAPQ 137
G G PGI +I + + L++S KK FL + ++ + RI+ EAP
Sbjct: 76 GPGLPGIPLAICHPEKD---ITLLDSNGKKTRFLTQSKIELKLSNITPVQSRIEKYEAPL 132
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D I++RA A L+ ++ S L
Sbjct: 133 F----DAITSRAFATLEDMVNGSIHLL 155
>gi|86147164|ref|ZP_01065480.1| glucose-inhibited division protein B [Vibrio sp. MED222]
gi|218711033|ref|YP_002418654.1| 16S rRNA methyltransferase GidB [Vibrio splendidus LGP32]
gi|254766912|sp|B7VN06|RSMG_VIBSL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85835048|gb|EAQ53190.1| glucose-inhibited division protein B [Vibrio sp. MED222]
gi|218324052|emb|CAV20414.1| glucose-inhibited division protein B [Vibrio splendidus LGP32]
Length = 210
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VS + +L + L KW+K NL S ++ ++H+ DS+ + H +ID+G
Sbjct: 18 EVSEKQRSQLVGYVELLNKWNKAYNLTSVRDPQEMMVKHILDSI-IVSTHLQGKRFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI SI E L++S K+ F++ V+ + V R++E Q
Sbjct: 77 TGPGLPGIPLSIMNPDCE---FYLLDSLGKRIRFIKQVIHELGIDNVVPIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDAVLSRAFASMTDMVEW 153
>gi|261885825|ref|ZP_06009864.1| methyltransferase GidB [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 182
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 59 VEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
VEDS++ + + P I ID+GSG GFP I S+ L+S E +L E KK+SFL YV
Sbjct: 37 VEDSMKPLEFLDFNPKIVIDVGSGAGFPAIFLSLILNSSE---FHLYEPIAKKSSFLSYV 93
Query: 118 VQKTAARGKVFACRIQEAPQMITTC-----DVISARALADLDTLLE 158
+ I P I +C D+I++RAL+ L+E
Sbjct: 94 GAALNLKN------ITVHPSKIESCQKIKADLITSRALSKTLFLIE 133
>gi|160941472|ref|ZP_02088807.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
gi|158435618|gb|EDP13385.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
Length = 259
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 35/173 (20%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF------------- 66
+S + LE+ +Y + ++ +K +NL + + D +H DSL +F
Sbjct: 19 KLSEKQLEQFFTYYEMLVEKNKVMNLTAITDETDVVSKHFSDSLSLFRVLKRVMDSGDGC 78
Query: 67 --------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+L S+ ID+G+G GFPGI I I+ + L++S NK+ FL V
Sbjct: 79 DGSRVYEEELLEGKSV-IDVGTGAGFPGIPLKIAFPGIK---LTLLDSLNKRVKFLEEVC 134
Query: 119 QKTAARGKVF-------ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ F R +E +M C +RA+A+L +L EY P++
Sbjct: 135 DALELKNVEFIHGRAEDIGRQKEHREMYDLC---VSRAVANLASLSEYCMPFV 184
>gi|118474743|ref|YP_892709.1| methyltransferase GidB [Campylobacter fetus subsp. fetus 82-40]
gi|193806438|sp|A0RR76|RSMG_CAMFF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118413969|gb|ABK82389.1| methyltransferase GidB [Campylobacter fetus subsp. fetus 82-40]
Length = 182
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 59 VEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
VEDS++ + + P I ID+GSG GFP I S+ L+S E +L E KK+SFL YV
Sbjct: 37 VEDSMKPLEFLDFNPKIVIDVGSGAGFPAIFLSLILNSSE---FHLYEPIAKKSSFLSYV 93
Query: 118 VQKTAARGKVFACRIQEAPQMITTC-----DVISARALADLDTLLE 158
+ I P I +C D+I++RAL+ L+E
Sbjct: 94 GAALNLK------NITVHPSKIESCQKIKADLITSRALSKTLFLIE 133
>gi|21674969|ref|NP_663034.1| glucose-inhibited division protein B [Chlorobium tepidum TLS]
gi|28201805|sp|Q8KAK0|RSMG_CHLTE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21648201|gb|AAM73376.1| glucose inhibited division protein B [Chlorobium tepidum TLS]
Length = 217
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
V++ L L + L W+ K+NLVS ++HV SL + ++H + +DL
Sbjct: 19 VTKNALTLLVRYARLLEAWNLKVNLVSRKEHAPVIVKHVFHSLLIARIHDFKPGETVLDL 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+GGG PGI +I L++S KK + + ++++ + R++E
Sbjct: 79 GTGGGLPGIPLAILFPETS---FLLVDSTGKKIAACKAMIKELGLENVIALHSRVEELKG 135
Query: 138 MITTCDVISARALADLDTLLEYS 160
+I D + +R +A L+ L YS
Sbjct: 136 VIF--DTVLSRQVAPLEELCAYS 156
>gi|86150893|ref|ZP_01069109.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 260.94]
gi|315124485|ref|YP_004066489.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85842063|gb|EAQ59309.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 260.94]
gi|315018207|gb|ADT66300.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 188
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L S +L E KKA+FLR + ++ + ++ ++QE Q I D
Sbjct: 75 PAVFLAFLLQSN----FHLFEPNPKKAAFLRTLKIECELSNLHIYKEKVQEY-QNIFKAD 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDVKPLLE 144
>gi|270264086|ref|ZP_06192353.1| ribosomal RNA small subunit methyltransferase G [Serratia odorifera
4Rx13]
gi|270041735|gb|EFA14832.1| ribosomal RNA small subunit methyltransferase G [Serratia odorifera
4Rx13]
Length = 206
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ ++ +K + ++ + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLDSLLSAAGIALPDQQKQQLLGYVGMLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNP 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H S +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 63 HLQGSRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLTNIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEY 159
R++E P VIS RA A L +L +
Sbjct: 120 VQSRVEEFPAEPPFDGVIS-RAFASLQDMLSW 150
>gi|223041388|ref|ZP_03611592.1| glucose-inhibited division protein B [Actinobacillus minor 202]
gi|223017778|gb|EEF16184.1| glucose-inhibited division protein B [Actinobacillus minor 202]
Length = 204
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL N+S +K + F+ L KW+K NL S ++ ++H+ DSL V Q
Sbjct: 4 KLDRLLTQANISLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDSLVVSQ- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H +ID+G+G G PGI +I ++ + V L++S K+ +F++ +++
Sbjct: 63 HLQGQQFIDVGTGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNAIRELKLTNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
R++E + D + +RA A L+ ++++ +
Sbjct: 120 VLSRVEEYQE--QQFDGVLSRAFASLNDMVDWCY 151
>gi|83746958|ref|ZP_00944004.1| Methyltransferase gidB [Ralstonia solanacearum UW551]
gi|207744822|ref|YP_002261214.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum IPO1609]
gi|83726378|gb|EAP73510.1| Methyltransferase gidB [Ralstonia solanacearum UW551]
gi|206596232|emb|CAQ63159.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum IPO1609]
Length = 225
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A ++ L++L + L KW++ NL + D H+ DSL
Sbjct: 9 ADARSELDAGARALGLSLDAAQLDRLLAYQALLGKWNRVYNLTAIRDAGDMLTHHLLDSL 68
Query: 64 --------RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RV + P +D+GSGGG PGI +I I +V++++ KK +FL
Sbjct: 69 AAVPRIAERVRRAQPEAPRVLDVGSGGGLPGIPLAIACPDIGVTMVDIVQ---KKTAFL 124
>gi|297567554|ref|YP_003686526.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
gi|296852003|gb|ADH65018.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
Length = 244
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSIWIDLG 79
S + LE+L Y L L+ + + NL + + F ++H+ DSL + QL ID+G
Sbjct: 24 SSQQLEQLSRLYDLLLEANTRTNLTAITDERGFVLKHLVDSLTCELSQLLEGQQRVIDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA--- 135
+G GFPG+ I +++ + L+E+ KK +L Q + + R +E
Sbjct: 84 TGAGFPGLPLKIVKPALD---MTLLEATRKKVEYLDQASQALGLKNIRTLWGRAEEQAHR 140
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P++ D RA+ T+ E P++
Sbjct: 141 PELREVFDRALVRAVGTTATVAELCLPFV 169
>gi|255067498|ref|ZP_05319353.1| 16S rRNA methyltransferase GidB [Neisseria sicca ATCC 29256]
gi|255048293|gb|EET43757.1| 16S rRNA methyltransferase GidB [Neisseria sicca ATCC 29256]
Length = 207
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S E L + L KW+K NL + H+ DSL + +D+G
Sbjct: 17 DLSAEQQTLLLAYTGLLKKWNKTYNLTALRDEAQMVSHHLLDSLTLLPYLQGAHTMLDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVFACRIQEAPQM 138
SGGG PGI +I + + L+++ KK +FL+ V++ + +V + R++ +
Sbjct: 77 SGGGQPGIPAAICRPDLN---ITLLDANTKKTAFLQQAVIELGLSNVRVVSGRVEAVQDL 133
Query: 139 ITTCDVISARALADL 153
D+I++RA A+L
Sbjct: 134 --QADIITSRAFAEL 146
>gi|251791739|ref|YP_003006460.1| methyltransferase GidB [Dickeya zeae Ech1591]
gi|247540360|gb|ACT08981.1| methyltransferase GidB [Dickeya zeae Ech1591]
Length = 206
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L KW+K NL S E +RH+ DSL V + H + +ID+G+G G PG+
Sbjct: 23 QLIQYVALLHKWNKAYNLTSVREPEQMLVRHIMDSL-VVEPHLVGNRFIDVGTGPGLPGV 81
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVI 145
+I L++S K+ FLR VQ G + R+++ P VI
Sbjct: 82 PLAIVRPDAH---FVLLDSLGKRVRFLRQ-VQHELNLGNIEPVQSRVEDFPSDPPFDGVI 137
Query: 146 SARALADLDTLLEY 159
S RA A L ++ +
Sbjct: 138 S-RAFASLQDMVNW 150
>gi|139439863|ref|ZP_01773228.1| Hypothetical protein COLAER_02262 [Collinsella aerofaciens ATCC
25986]
gi|133774791|gb|EBA38611.1| Hypothetical protein COLAER_02262 [Collinsella aerofaciens ATCC
25986]
Length = 261
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIWIDLGSGGGFPGIIT 89
L L+ +K NL VED + H+ DSL + PY +D+G+G GFPGI
Sbjct: 57 LVLETNKTTNLTRILNVEDAAVLHILDSLVLL---PYINKAPEGALLDMGTGAGFPGIPL 113
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE-APQMITTCDVISA 147
+I I+S KK + V + R++E A V++A
Sbjct: 114 TITTHRK----ATYIDSVGKKVDAVNSFVHALGLKHAHAVHDRLEEYARSHKKQFSVVTA 169
Query: 148 RALADLDTLLEYSFPWL 164
RALA L L+EY+ P+L
Sbjct: 170 RALAPLPILVEYAAPYL 186
>gi|289548693|ref|YP_003473681.1| methyltransferase GidB [Thermocrinis albus DSM 14484]
gi|289182310|gb|ADC89554.1| methyltransferase GidB [Thermocrinis albus DSM 14484]
Length = 197
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
N +N++ E +++ + + +W+K NL S E RH DSL + I +
Sbjct: 13 NGFNLTEEQIQRFDLYLRELKRWNKVHNLTSLEEDEQIIKRHFLDSLTLTLCIEEKGIDV 72
Query: 77 ------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
D+GSG GFPG+ +++ + + LIES +KK SFL Y+ +V
Sbjct: 73 KGKKVCDVGSGAGFPGV--PLKIFYQDAINLTLIESVSKKCSFLEYLKVVLDIDYRVLCT 130
Query: 131 RIQEAPQMITTCDVISARALADLDTLL 157
R ++ + V+ +RAL L+ L
Sbjct: 131 RAEKVKEKFY---VVVSRALGPLEETL 154
>gi|298370291|ref|ZP_06981607.1| 16S rRNA methyltransferase GidB [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281751|gb|EFI23240.1| 16S rRNA methyltransferase GidB [Neisseria sp. oral taxon 014 str.
F0314]
Length = 207
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIWIDLGSGGG 83
+KL + + KW+K NL + H+ DSL L PY +D+GSGGG
Sbjct: 24 DKLLAYVEMLKKWNKTYNLTALRDESQIISHHLLDSL---TLPPYLEGAQTMLDVGSGGG 80
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PGI ++ ++ + L+++ KK SFL+ + + +V + R+ EA Q +
Sbjct: 81 QPGIPAAVCRPDLQ---ITLLDANTKKTSFLQQAAIELELKNVRVVSGRV-EAVQGL-RA 135
Query: 143 DVISARALADL 153
DVI++RA A+L
Sbjct: 136 DVITSRAFAEL 146
>gi|209526668|ref|ZP_03275192.1| methyltransferase GidB [Arthrospira maxima CS-328]
gi|209492904|gb|EDZ93235.1| methyltransferase GidB [Arthrospira maxima CS-328]
Length = 251
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIW 75
S LE Y L ++++NL + FW +H+ DSLR + P+ P
Sbjct: 23 SDRQLEMFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLR--GVVPWLSGDKLPLRV 80
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
ID+G+G GFPG+ +I + + E V L++S KK +FL+ ++ +
Sbjct: 81 IDIGTGAGFPGVPIAIAIPTAE---VTLLDSTGKKIAFLQTLIPR 122
>gi|56477078|ref|YP_158667.1| 16S rRNA methyltransferase GidB [Aromatoleum aromaticum EbN1]
gi|81821135|sp|Q5P4J7|RSMG_AZOSE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56313121|emb|CAI07766.1| Methyltransferase gidB, Glucose inhibited division protein B
[Aromatoleum aromaticum EbN1]
Length = 211
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S T +L F L KW++ NL S H+ DSL V + D+G
Sbjct: 16 HLSPATQARLAAFATLLQKWNRVYNLTSIRDAGQVVTHHLLDSLAVLPHLEGITTLADVG 75
Query: 80 SGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASF 113
SGGG PGI ++ L V IE+ NKKASF
Sbjct: 76 SGGGLPGIPLALAAPDCHPALAVTSIETVNKKASF 110
>gi|145588205|ref|YP_001154802.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189040706|sp|A4SUS4|RSMG_POLSQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145046611|gb|ABP33238.1| 16S rRNA m(7)G-527 methyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 222
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------LRVFQLHPYP 72
++S + + LE F +W++ NL + E H+ DS +R F P
Sbjct: 15 LDLSPQNVADLELFLQEMTRWNQVHNLTAIDNEEGSIRLHLIDSIAVLPVMRRFLPQQNP 74
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
I DLGSGGG P I +I +E + LIE+ KK +FL++V K + +V +
Sbjct: 75 KI-ADLGSGGGLPAIPIAI----VEPNWRLTLIEAIRKKTAFLQHVRGKLKLKNIEVISD 129
Query: 131 RIQE-APQMITTCDVISARALADLDTLLEYSFPWL 164
R++ A Q D + +RA +L L+ S P L
Sbjct: 130 RVENVALQQSGQFDAVISRAFTNLARFLDLSLPLL 164
>gi|255531336|ref|YP_003091708.1| methyltransferase GidB [Pedobacter heparinus DSM 2366]
gi|255344320|gb|ACU03646.1| methyltransferase GidB [Pedobacter heparinus DSM 2366]
Length = 210
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWI 76
+++ + + + + Y L+ W+ +IN++S +++ + RH+ SL + + P + +
Sbjct: 14 DLTEKQIAQFDQLYSLYSFWNAQINVISRKDIDELYERHILHSLGIAKFCTFKPGEKV-L 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQE 134
D+G+GGGFPGI +I +L++S KK ++ V + +A G V A ++
Sbjct: 73 DVGTGGGFPGIPLAILFPET---YFHLVDSIGKK---IKVVTEVASALGLENVKASHLR- 125
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q+ D I +RA+ L +PW+ K
Sbjct: 126 AEQVTDKFDFIVSRAVTRLIDF----YPWIKGK 154
>gi|300778447|ref|ZP_07088305.1| 16S rRNA methyltransferase GidB [Chryseobacterium gleum ATCC 35910]
gi|300503957|gb|EFK35097.1| 16S rRNA methyltransferase GidB [Chryseobacterium gleum ATCC 35910]
Length = 211
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RV 65
+ A+ LL + +++ + E+ L+ +W++KIN++S +E + +H+ SL +V
Sbjct: 1 MSASLLLKYFPDLTEKQKEQFSQLENLYNEWNEKINVISRKDMESLYEKHILHSLGIAKV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
P + +D+G+GGGFPGI +I +E LI+S KK S ++ V
Sbjct: 61 MAFAPGTKV-LDIGTGGGFPGIPLAILFPEVE---FTLIDSIGKKISVVQAVA 109
>gi|199597912|ref|ZP_03211337.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
gi|199591169|gb|EDY99250.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
Length = 243
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWIDLGSGG 82
++ +Y + ++K+NL + D +++H DSL V +L P D+G+G
Sbjct: 23 DQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQSQPLSLCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP I I ++ + +++S K+ FL + VQ R + F + +
Sbjct: 83 GFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAK--K 137
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+P D+++ARA+A L+ L E P Q
Sbjct: 138 SPHR-GQYDLVTARAVAALNVLAELCLPLAKQ 168
>gi|259502035|ref|ZP_05744937.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
gi|259169999|gb|EEW54494.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
Length = 241
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IW 75
N+S + +++ +Y + ++++NL + D +++H DSL P
Sbjct: 16 NLSDQQMQQFADYYRQLVATNRQVNLTRITEENDVYLKHFYDSLTGALAEPRLQTEQLTL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKV 127
D+G+G GFP + I ++ V +++S NK+ SFL+ +V + R +
Sbjct: 76 CDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRISFLQALVAQLGLTGVTLVHDRAET 132
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
F+ + ++P D++ ARA+A L L E P
Sbjct: 133 FSAK--QSPHR-EQYDLVLARAVARLSVLSELCLP 164
>gi|300770006|ref|ZP_07079885.1| 16S rRNA methyltransferase GidB [Sphingobacterium spiritivorum ATCC
33861]
gi|300762482|gb|EFK59299.1| 16S rRNA methyltransferase GidB [Sphingobacterium spiritivorum ATCC
33861]
Length = 211
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWI-DLGSGGGFPGIITSI 91
L+ W+ +IN++S +E ++ HV SL + F P I D+G+GGGFPGI +I
Sbjct: 29 LYPFWNNQINVISRKDIESLYLHHVLHSLGIAKFMTEFAPGTHILDVGTGGGFPGIPLAI 88
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
++ +L++S KK +R V TA A Q+ D + +RA+
Sbjct: 89 LFPEVK---FHLVDSIGKKIKVVREVA--TALGLTNVEADHMRAEQLDYKYDFVVSRAVT 143
Query: 152 DLDTLLEYSFPWLYQK 167
L PW+ K
Sbjct: 144 RLGDFT----PWIRNK 155
>gi|324111639|gb|EGC05620.1| glucose inhibited division protein [Escherichia fergusonii B253]
gi|325499546|gb|EGC97405.1| 16S rRNA methyltransferase GidB [Escherichia fergusonii ECD227]
Length = 207
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLDNITPVQSRVEEFPAEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
LD +L +
Sbjct: 143 SLDDMLNW 150
>gi|118620074|ref|YP_908406.1| glucose-inhibited division protein B Gid [Mycobacterium ulcerans
Agy99]
gi|193806449|sp|A0PX66|RSMG_MYCUA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118572184|gb|ABL06935.1| glucose-inhibited division protein B Gid [Mycobacterium ulcerans
Agy99]
Length = 170
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V+ W RHV +S + +L + +D+GSG G P + +I ++ V L
Sbjct: 35 GLLGPREVDRLWERHVLNSAVIGELLDHGERVVDIGSGAGLPALPLAIARHDLQ---VVL 91
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSF 161
+E ++ FL+ VV +V R +E + + D +RA+A LD L ++S
Sbjct: 92 LEPMLRRVEFLQEVVTDLGLAVEVVRGRAEERSVRERLGGSDAAVSRAVAALDKLAKWSM 151
Query: 162 PWLYQK 167
P L ++
Sbjct: 152 PLLKRE 157
>gi|171060864|ref|YP_001793213.1| 16S rRNA methyltransferase GidB [Leptothrix cholodnii SP-6]
gi|238689093|sp|B1XYL2|RSMG_LEPCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170778309|gb|ACB36448.1| methyltransferase GidB [Leptothrix cholodnii SP-6]
Length = 218
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-----LHPYPSIWIDLGSG 81
+ L + L +W++ NL + + ++H+ DSL V P +D+GSG
Sbjct: 25 DALLAYLGLLQRWNQVYNLTAIRDPKQMLVQHLLDSLAVIAPLNRVAGSAPLRLLDVGSG 84
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GG PG++ ++ + + +++ KKA+F+R V + R R Q+
Sbjct: 85 GGLPGVVIAVLRPDCQ---ITCVDTVAKKATFIRQVTAEL--RLPQLVARHARVEQLTDG 139
Query: 142 C-DVISARALADLDTLLEYSFPWL 164
VI+ARA A L L++ + P L
Sbjct: 140 PYSVITARAFASLADLVKLTRPLL 163
>gi|46199908|ref|YP_005575.1| glucose inhibited division protein B [Thermus thermophilus HB27]
gi|55976455|sp|Q72H89|RSMG_THET2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46197535|gb|AAS81948.1| glucose inhibited division protein B [Thermus thermophilus HB27]
Length = 249
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------IDLG 79
LE Y L + S K+NL + E+ ++H DSL + +L +W +DLG
Sbjct: 33 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRL----PLWQGPLRVLDLG 88
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ----KTA----ARGKVFACR 131
+G GFPG+ I +E + L+++ KK +F+ ++ K A R +V A
Sbjct: 89 TGAGFPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLA-- 143
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+EA D ARA+A L L E P+L
Sbjct: 144 -REAGHR-EAYDRAVARAVAPLCVLSELLLPFL 174
>gi|329298810|ref|ZP_08256146.1| 16S rRNA methyltransferase GidB [Plautia stali symbiont]
Length = 205
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 15 LLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
LL N+S +K + + L KW+K NL S + +RH+ DS+ V + H
Sbjct: 8 LLQAANISLSDQQKQQLVGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVESHLQG 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 67 ERFIDVGTGPGLPGIPLAIVRPQAH---FTLLDSLGKRVRFLRQVQHELGLTNVTPVQSP 123
Query: 132 IQEAPQMITTCDVISARALADLDTLLEY 159
++E P VIS RA A L+ +L +
Sbjct: 124 VEEFPAEPPFDGVIS-RAFASLEDMLNW 150
>gi|325284181|ref|YP_004256722.1| Ribosomal RNA small subunit methyltransferase G [Deinococcus
proteolyticus MRP]
gi|324315990|gb|ADY27105.1| Ribosomal RNA small subunit methyltransferase G [Deinococcus
proteolyticus MRP]
Length = 255
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGFPGIIT 89
Y L+ S ++NL + + D ++H DSL + + +DLG+G GFP +
Sbjct: 46 LYGRLLEGSAQMNLTALQSERDIVLKHFVDSLGCLNAGEWATGAAVLDLGTGAGFPALPL 105
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA---PQMITTCDVIS 146
+I + + +++ KK +F+ Q + R +E PQ DV+
Sbjct: 106 AIVRPDLR---ITALDATAKKVAFVERTAQALGLAVQGLTGRAEEVGRDPQHRGAYDVVV 162
Query: 147 ARALADLDTLLEYSFPWL 164
RA+A L L E + P L
Sbjct: 163 TRAVAALPVLAELALPLL 180
>gi|257059962|ref|YP_003137850.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
gi|256590128|gb|ACV01015.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
Length = 240
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL------RVFQLHPY 71
+N + ++ + Y + +++INL + DFW +H+ DSL + L
Sbjct: 14 NWNPNPSQQKQWDKLYHEIILANRQINLTRITEPNDFWEKHLWDSLAGILDIEIINLEQS 73
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ ID+G+G GFPGI I + + V L +S KK +F++ ++++ + +
Sbjct: 74 LKV-IDIGTGAGFPGIPIGIVCPNWQ---VTLFDSTRKKINFIKILLEELSLKNCHTLIG 129
Query: 131 RIQEAPQMIT---TCDVISARALADLDTLLEYSFPWL 164
R +E Q ++ + D+ RA+ + EY+ P L
Sbjct: 130 RAEEIGQNLSHRESYDLALIRAVGEASVCAEYTLPLL 166
>gi|261867024|ref|YP_003254946.1| 16S rRNA methyltransferase GidB [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412356|gb|ACX81727.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 227
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L F L KW+K NL S +D ++H+ DSL V H +ID+G+G G PG
Sbjct: 44 QQLIDFVNLLNKWNKAYNLTSVRDPQDMLVKHILDSL-VVSPHLQGDRFIDVGTGPGLPG 102
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
+ +I + + V L++S K+ SF+R V++ K R++E Q D +
Sbjct: 103 LPLAI--INPDKQFV-LLDSLGKRISFIRNAVRELGLTNVKPVLSRVEEY-QPEEKFDGV 158
Query: 146 SARALADLDTLLEY 159
+RA A L + E+
Sbjct: 159 LSRAFASLKDMTEW 172
>gi|239631036|ref|ZP_04674067.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301065357|ref|YP_003787380.1| cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
gi|239527319|gb|EEQ66320.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300437764|gb|ADK17530.1| Cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
Length = 243
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 18/150 (12%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI----DLGSGG 82
++ +Y + ++K+NL + D +++H DSL + + P + D+G+G
Sbjct: 23 DQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP I I ++ + +++S K+ FL + VQ R + F +
Sbjct: 83 GFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAKKS- 138
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
Q + D+++ARA+A LD L E P +
Sbjct: 139 --QHRASFDLVTARAVAALDVLAELCLPLV 166
>gi|152998467|ref|YP_001343302.1| methyltransferase GidB [Marinomonas sp. MWYL1]
gi|189045858|sp|A6W3T8|RSMG_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150839391|gb|ABR73367.1| methyltransferase GidB [Marinomonas sp. MWYL1]
Length = 208
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
+S ET++ L + + KW+K NL + VE H+ DSL PY + ID+
Sbjct: 18 LSDETIQTLVKYLAMLEKWNKAYNLTAIRDVEQMISLHLLDSLATL---PYITGDNIIDV 74
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG++ +I L++S KK FL V + A E
Sbjct: 75 GTGPGLPGMVLAICYPEKR---FTLLDSNGKKTRFLTQVKMELGIHNATVANERVEKHSH 131
Query: 139 ITTCDVISARALADLDTLLEYSFP 162
D + +RA A L ++ ++ P
Sbjct: 132 QGEYDHVISRAFASLQDMINWTLP 155
>gi|237756366|ref|ZP_04584914.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691480|gb|EEP60540.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 200
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------DLG 79
LE + + + LKW+K NL S ++ I+H DSL + +L I + D G
Sbjct: 21 LELFDKYLSMLLKWNKVYNLTSVRKKDEIVIKHFLDSLTLVKLFEAKGISVEDKEIADFG 80
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+GGGFPG+ +++ + + LIES NKK FL + ++ V R A +
Sbjct: 81 TGGGFPGV--PLKIYYQDKIKLYLIESINKKCIFLEMLKKELKIDYTVLCDR---AENID 135
Query: 140 TTCDVISARALAD 152
D++ +RA +
Sbjct: 136 KKFDIVVSRATGE 148
>gi|261415517|ref|YP_003249200.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371973|gb|ACX74718.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 214
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 6 SNSILRANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ S+ + LL+ Y V ++TL+++ F+ L + +L + E RH D
Sbjct: 2 TPSLAGLDKLLHYYGVELQQDTLKQIWEFHQLLRANNDDQDLTRLNAFETMVERHYADCT 61
Query: 64 RVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P +P+ ID+GSG GFPGI I SI + L E + + +FL V++K
Sbjct: 62 LINAYVPKWPARMIDVGSGAGFPGIPLKIVNPSIR---LTLCEPRPNRINFLNMVIEKMG 118
Query: 123 ARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+G VF ++ I VIS RA L+E + P
Sbjct: 119 LKGIDVFGHKVTSRSMTIPVDGVIS-RAFE----LMEKTLP 154
>gi|258507237|ref|YP_003169988.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|258538424|ref|YP_003172923.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus Lc 705]
gi|257147164|emb|CAR86137.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus GG]
gi|257150100|emb|CAR89072.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus Lc 705]
gi|259648603|dbj|BAI40765.1| methyltransferase GidB [Lactobacillus rhamnosus GG]
Length = 243
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWIDLGSGG 82
++ +Y + ++K+NL + D +++H DSL V +L P D+G+G
Sbjct: 23 DQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQSQPLSLCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP I I ++ + +++S K+ FL + VQ R + F + +
Sbjct: 83 GFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAK--K 137
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+P D+++ARA+A L+ L E P Q
Sbjct: 138 SPHR-GQYDLVTARAVAALNVLAELCLPLAKQ 168
>gi|218246901|ref|YP_002372272.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
gi|218167379|gb|ACK66116.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
Length = 240
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL------RVFQLHPY 71
+N + ++ + Y + +++INL + DFW +H+ DSL + L
Sbjct: 14 NWNPNPSQQKQWDKLYHEIILANRQINLTRITEPNDFWEKHLWDSLAGILDIEIINLEQS 73
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR------G 125
+ ID+G+G GFPGI I + + V L +S KK +F++ ++++ + + G
Sbjct: 74 LKV-IDIGTGAGFPGIPIGIVCPNWQ---VTLFDSTRKKINFIKILLEELSLKNCHTLIG 129
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ A I + P + D+ RA+ + EY+ P L
Sbjct: 130 R--AEEIGQNPSHRESYDLALIRAVGEASVCAEYTLPLL 166
>gi|313203170|ref|YP_004041827.1| 16S rRNA m(7)g-527 methyltransferase [Paludibacter
propionicigenes WB4]
gi|312442486|gb|ADQ78842.1| 16S rRNA m(7)G-527 methyltransferase [Paludibacter
propionicigenes WB4]
Length = 206
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYP-SIWIDLGSGGGFP 85
+ + Y L+ +W+ KIN++S +E+ + HV SL + + +H P S +D+G+GGGFP
Sbjct: 18 QFQALYDLYFEWNAKINVISRKDIENLYEHHVLHSLAIAEIIHFQPGSTILDVGTGGGFP 77
Query: 86 GIITSI 91
GI +I
Sbjct: 78 GIPLAI 83
>gi|269797063|ref|YP_003316518.1| glucose-inhibited division protein B [Sanguibacter keddieii DSM
10542]
gi|269099248|gb|ACZ23684.1| glucose-inhibited division protein B [Sanguibacter keddieii DSM
10542]
Length = 210
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +E F + L+ + W RH+ +S V Q P +D+GSG G
Sbjct: 16 EAFPAVERFAHELTVQGELRGLIGPRELGRIWDRHILNSAAVVQYLPEQGTVVDIGSGAG 75
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQEAPQMI 139
PG++ + E V L+E ++ +L + T A G +V R +E
Sbjct: 76 LPGLVIAAMRPQAE---VILVEPMERRCVWL---AEMTDAMGLTNVEVKRGRAEEFHDAF 129
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
DV+++RA+A LD L +S P L
Sbjct: 130 -EADVVTSRAVAALDKLARWSLPLL 153
>gi|327469077|gb|EGF14549.1| glucose inhibited division protein B [Streptococcus sanguinis
SK330]
Length = 237
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQDRKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQMD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|313886704|ref|ZP_07820414.1| 16S rRNA methyltransferase GidB [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923866|gb|EFR34665.1| 16S rRNA methyltransferase GidB [Porphyromonas asaccharolytica
PR426713P-I]
Length = 224
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWI--D 77
+S ++L Y L+ W+ +IN++S +++ ++ HV SL + L P P+ + D
Sbjct: 23 LSPTAQQQLTALYPLYKGWNARINVISRRDIDNLYLHHVMHSLALAWLLPDEPTSYTIAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---AARGKVFACRIQE 134
+G GGGFP I +I + L++ I K A + + T +V +C ++
Sbjct: 83 VGCGGGFPSIPLAILYPQYQFLLIDSIAKKLHVAQAIADEIGLTNVSTHHTRVESCDLR- 141
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
CD I +RA L L EY+
Sbjct: 142 -------CDYIVSRAAMPLGLLYEYT 160
>gi|261880786|ref|ZP_06007213.1| glucose-inhibited division protein B [Prevotella bergensis DSM
17361]
gi|270332564|gb|EFA43350.1| glucose-inhibited division protein B [Prevotella bergensis DSM
17361]
Length = 212
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLH 69
NY + +E L+ Y +W+ KIN++S +++ ++ HV SL +V
Sbjct: 8 NYFPDLTPRQKEQFGALDALYH---EWNAKINVISRKDIDNLYLHHVLHSLAIAKVVSFR 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
P +I +D+G+GGGFPGI +I L++ I K + A+ + + +
Sbjct: 65 PGTTI-LDIGTGGGFPGIPLAIMFPECRFRLIDSIGKKVRVATEVAHAI 112
>gi|17548044|ref|NP_521446.1| glucose inhibited division protein B [Ralstonia solanacearum
GMI1000]
gi|20177886|sp|Q8XU66|RSMG_RALSO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17430350|emb|CAD17115.1| probable methyltransferase gidb (glucose inhibited divisionprotein
b) [Ralstonia solanacearum GMI1000]
Length = 223
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A + L++L + L KW++ NL + D H+ DSL
Sbjct: 7 ADTRSELEAGARALGLPLEGVQLDRLLAYQVLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 66
Query: 64 R--------VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
V ++ P S +D+GSGGG PGI +I I +V++++ KK +FL
Sbjct: 67 AAVPRIAELVRRVQPEASRVLDVGSGGGLPGIPLAIACPDIGVTMVDIVQ---KKTAFL 122
>gi|239813065|ref|YP_002941975.1| 16S rRNA methyltransferase GidB [Variovorax paradoxus S110]
gi|239799642|gb|ACS16709.1| methyltransferase GidB [Variovorax paradoxus S110]
Length = 213
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 17/141 (12%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
+S E+L + L LKW+K NL + H+ DSL P W
Sbjct: 19 LSDAQAEQLLAYGTLMLKWNKVYNLTALRDPASVLTHHLLDSLAAVA--PLQREWAGKGK 76
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSGGG PG++ ++ +E V+ +++ KKA+F VQ+ AA ++ R
Sbjct: 77 LLDVGSGGGLPGVVIAVLRPDLE---VSCLDAVAKKAAF----VQQVAAELELPNLRGLH 129
Query: 135 A--PQMITTCDVISARALADL 153
A + + +VIS+RA A L
Sbjct: 130 ARVESLTGSYEVISSRAFASL 150
>gi|258512901|ref|YP_003186335.1| methyltransferase GidB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479627|gb|ACV59946.1| methyltransferase GidB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 239
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
V+ ET L + L +W++++NL + V + WI+H DS + Q+ + I
Sbjct: 15 VTDETERHLRRYGELLGEWNERLNLTAIVEVREMWIKHFLDSAAIAQVPAWREIAERGGR 74
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
ID+GSG G PGI +I ++ L ++ K+ F+ +V+
Sbjct: 75 VIDIGSGAGIPGIPLAIAWRNVS---FVLCDASRKRVQFVEHVI 115
>gi|116334626|ref|YP_796153.1| glucose-inhibited division protein B [Lactobacillus brevis ATCC
367]
gi|122268695|sp|Q03NV0|RSMG_LACBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116099973|gb|ABJ65122.1| Cell division SAM-dependent methyltransferase [Lactobacillus brevis
ATCC 367]
Length = 242
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWIDLGSGGGFP 85
+Y+ FL + ++ +NL + + D +++H DSL V L P D+G+G GFP
Sbjct: 27 DYYQFL-VATNEHVNLTTITAEPDVYLKHFYDSLTPAFYVSALRTEPLTLCDVGAGAGFP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQE----APQMIT 140
+ I ++ V +++S NK+ +FL + K G F R +E
Sbjct: 86 SLPLKIVFPQLQ---VTIVDSLNKRITFLNELAAKLNLTGVAFHHARAEEFGGKRAANRE 142
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E P +
Sbjct: 143 GFDLVTARAVARMSVLSELCLPLV 166
>gi|332971535|gb|EGK10485.1| glucose inhibited division protein B [Kingella kingae ATCC 23330]
Length = 216
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+ NL + H+ DSL + +D+GSGGG PGI T+I ++
Sbjct: 42 KWNSTYNLTALRDENQMISHHILDSLTLLPYVQNAQSMMDVGSGGGMPGIPTAICRPDLQ 101
Query: 98 GGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALA 151
+ L+++ KK +FL+ + T A G+V A ++ DV+++RA A
Sbjct: 102 ---ITLLDANTKKTTFLQQAAIELGLKNVTVASGRVEAMHDKK-------VDVVTSRAFA 151
Query: 152 DL 153
+L
Sbjct: 152 EL 153
>gi|237809877|ref|YP_002894317.1| methyltransferase GidB [Tolumonas auensis DSM 9187]
gi|237502138|gb|ACQ94731.1| methyltransferase GidB [Tolumonas auensis DSM 9187]
Length = 209
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
LL N+S +K + + L KW+K NL S E +RH+ DS+ V PY
Sbjct: 11 LLQQANISLSDQQKQQLLALVGLLHKWNKAYNLTSVREPEAMLVRHILDSIVV---APYL 67
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FA 129
S +ID+G+G G PG+ +I + L++S K+ F+R V+ + + V
Sbjct: 68 NGSRFIDVGTGPGLPGLPLAIVQPDKQ---FVLLDSLGKRIRFIRQVILELGLKNVVAVQ 124
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
R++E T D + +RA A L+ +L +
Sbjct: 125 SRVEEFHDE-TGFDGVLSRAFASLNDMLSW 153
>gi|308188711|ref|YP_003932842.1| glucose inhibited division protein B [Pantoea vagans C9-1]
gi|308059221|gb|ADO11393.1| glucose inhibited division protein B [Pantoea vagans C9-1]
Length = 207
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S + ++L + L KW+K NL S + +RH+ DS+ V H S +ID+G
Sbjct: 15 SLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVAPHLKGSRFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+G G PGI +I + L++S K+ FLR V
Sbjct: 74 TGPGLPGIPLAIVMPDAH---FTLLDSLGKRVRFLRQV 108
>gi|311742157|ref|ZP_07715967.1| 16S rRNA methyltransferase GidB [Aeromicrobium marinum DSM 15272]
gi|311314650|gb|EFQ84557.1| 16S rRNA methyltransferase GidB [Aeromicrobium marinum DSM 15272]
Length = 194
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
++ V W RH+ + + V P + D+GSG G PG++ +I IE + L
Sbjct: 27 GMIGPREVPRLWDRHLWNCVVVVPRIPAGATVADVGSGAGLPGLVWAIARPDIE---MTL 83
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+E ++ +FL VV++ V R A + + DV++ARA+A +D L + P
Sbjct: 84 VEPLLRRTTFLTEVVERLGL-SNVTVDR-SRAEDVSSVFDVVTARAVAPMDRLAGWCLPL 141
Query: 164 LYQ 166
+ +
Sbjct: 142 VRE 144
>gi|297570163|ref|YP_003691507.1| methyltransferase GidB [Desulfurivibrio alkaliphilus AHT2]
gi|296926078|gb|ADH86888.1| methyltransferase GidB [Desulfurivibrio alkaliphilus AHT2]
Length = 269
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 55/165 (33%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---------------- 68
+ +L ++ LKWS++INLV+++ + H DSL ++ L
Sbjct: 24 AIARLCRYHEELLKWSRRINLVAAAPPRELLATHFLDSLTLWPLLADLPVNDHRAPPLAA 83
Query: 69 ---------------HPYPS--------------IWIDLGSGGGFPGIITSIQLSSIEGG 99
HP PS +D+G+G GFPG+ +++ E
Sbjct: 84 IKPAHKGTDLISVPDHPSPSRLQQPALAGDCSRLSLLDVGTGAGFPGL--ALKCWRPEAL 141
Query: 100 LVNLIESKNKKASFLRYVVQ--KTAARGKVFACRI------QEAP 136
V L+E + K+ SFLR+V++ K +V A R+ QEAP
Sbjct: 142 AVTLMEPRAKRVSFLRHVIRTLKLQEGTQVLAQRLEPVTDSQEAP 186
>gi|218960615|ref|YP_001740390.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division (gidB-like) [Candidatus
Cloacamonas acidaminovorans]
gi|167729272|emb|CAO80183.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division (gidB-like) [Candidatus
Cloacamonas acidaminovorans]
Length = 219
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSS-TVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGG 83
+ + E++ L ++K+NLVS + +E +W++H DS+ + + +D GSGGG
Sbjct: 30 MARFEHYLHLLYNANRKVNLVSRNIPLERYWVQHFLDSIVALECLDFTDKTVLDFGSGGG 89
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLR-YVVQKTAARGKVFACRIQEAPQMI--T 140
PGI + + + L++S KKA LR +V + + V A R+++ +
Sbjct: 90 LPGIPLKLAVPDFN---LTLLDSVQKKARVLREFVDALSLSATNVEASRLEDYAYVAKRP 146
Query: 141 TCDVISARALA 151
+ D I RA+A
Sbjct: 147 SYDFIVCRAVA 157
>gi|332363959|gb|EGJ41738.1| glucose inhibited division protein B [Streptococcus sanguinis
SK355]
Length = 237
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
E+ E ++ L + W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 EQFERYFELLVAWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|157415254|ref|YP_001482510.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81116]
gi|172047135|sp|A8FM46|RSMG_CAMJ8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157386218|gb|ABV52533.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81116]
gi|315932124|gb|EFV11067.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 327]
Length = 188
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKIKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L + +L E KKA+FLR + ++ + ++ ++QE Q I D
Sbjct: 75 PAVFLAFLLQNN----FHLFEPNPKKAAFLRTLKIECELSNLHIYKEKVQEY-QNIFKAD 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDVKPLLE 144
>gi|294630332|ref|ZP_06708892.1| methyltransferase GidB [Streptomyces sp. e14]
gi|292833665|gb|EFF92014.1| methyltransferase GidB [Streptomyces sp. e14]
Length = 238
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 28 YAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E IT V+
Sbjct: 88 VREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVMGKITPVHVV 139
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLATWGIPLL 158
>gi|293977917|ref|YP_003543347.1| putative S-adenosylmethionine-dependent methyltransferase
[Candidatus Sulcia muelleri DMIN]
gi|292667848|gb|ADE35483.1| Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Candidatus Sulcia
muelleri DMIN]
Length = 208
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGI 87
++KKIN++S++++ F+ RH+ SL V+++ + SI ID+G+GGGFPGI
Sbjct: 31 FNKKINIISNNSLNFFYERHILHSLCVYKICYFLNKSIIIDVGTGGGFPGI 81
>gi|229550864|ref|ZP_04439589.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
gi|229315689|gb|EEN81662.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
Length = 256
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPSIWIDLGSGG 82
++ +Y + ++K+NL + D +++H DSL V +L P D+G+G
Sbjct: 36 DQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQSQPLSLCDVGAGA 95
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP I I ++ + +++S K+ FL + VQ R + F + +
Sbjct: 96 GFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAK--K 150
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+P D+++ARA+A L+ L E P Q
Sbjct: 151 SPHR-GQYDLVTARAVAALNVLAELCLPLAKQ 181
>gi|206603438|gb|EDZ39918.1| Putative glucose-inhibited division protein B [Leptospirillum sp.
Group II '5-way CG']
Length = 210
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLH 69
+++ N ++ ET+ +L F + W++ I L D V + L F L
Sbjct: 8 SHVFNQFHFDSETINRLSEFVEVLASWNQHIRLSGYREKADIRQHLVTEPLLAAHYFGLA 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+D GSG G PGII SI + ++L+E K KK SFL YV+ + + F
Sbjct: 68 SSLCSIVDFGSGNGSPGIIFSILYPHLR---ISLVERKQKKLSFLSYVISRLNLQNTTFY 124
Query: 129 -----ACRIQEAP 136
A Q+AP
Sbjct: 125 DNIRSALTAQQAP 137
>gi|327384225|gb|AEA55699.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BD-II]
Length = 243
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI----DLGSGG 82
++ +Y + ++K+NL + D +++H DSL + + P + D+G+G
Sbjct: 23 DQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP I I ++ + +++S K+ FL + VQ R + F + +
Sbjct: 83 GFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAK--K 137
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+P + D+++ARA+A LD L E P +
Sbjct: 138 SPHR-ASFDLVTARAVAALDVLAELCLPLV 166
>gi|108805990|ref|YP_645927.1| methyltransferase GidB [Rubrobacter xylanophilus DSM 9941]
gi|123365716|sp|Q1AR63|RSMG_RUBXD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108767233|gb|ABG06115.1| methyltransferase GidB [Rubrobacter xylanophilus DSM 9941]
Length = 261
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEG 98
++ N++ + E + HV DS P + D+GSGGG PGI I L
Sbjct: 54 RRANVIGTREPETVLLEHVLDSASCLLFEPLRAAGRVADVGSGGGLPGIPLKILLPEAR- 112
Query: 99 GLVNLIESKNKKASFLRYVVQ 119
V LIES KKA FLRY ++
Sbjct: 113 --VVLIESTGKKADFLRYAIE 131
>gi|239624144|ref|ZP_04667175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520530|gb|EEQ60396.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIW------ 75
+E+ +Y + ++ +K +NL + + + +H DSL +F ++ W
Sbjct: 17 MEQFYSYYEILVEKNKVMNLTAITEENEVVTKHFSDSLSLFGLLKEMQVGGDAWYKTCNV 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+G+G GFPGI I ++ V L++S NK+ +L V + G C +
Sbjct: 77 IDVGTGAGFPGIPLKIVFPELK---VTLLDSLNKRVKWLEEVCTELHLEG---VCCVHGR 130
Query: 136 PQMI-------TTCDVISARALADLDTLLEYSFPWL 164
+ I D+ +RA+A+L +L EY P++
Sbjct: 131 AEDIGRQAAHREVYDLCVSRAVANLASLSEYCMPFV 166
>gi|302328144|gb|ADL27345.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 264
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 8 SILRANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S+ + LL+ Y V ++TL+++ F+ L + +L + E RH D +
Sbjct: 54 SLAGLDKLLHYYGVELQQDTLKQIWEFHQLLRANNDDQDLTRLNAFETMVERHYADCTLI 113
Query: 66 FQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
P +P+ ID+GSG GFPGI I SI + L E + + +FL V++K +
Sbjct: 114 NAYVPKWPARMIDVGSGAGFPGIPLKIVNPSIR---LTLCEPRPNRINFLNMVIEKMGLK 170
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
G VF ++ I VIS RA L+E + P
Sbjct: 171 GIDVFGHKVTSRSMTIPVDGVIS-RAFE----LMEKTLP 204
>gi|191637023|ref|YP_001986189.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BL23]
gi|190711325|emb|CAQ65331.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Lactobacillus casei BL23]
gi|327381050|gb|AEA52526.1| 16S rRNA methyltransferase GidB [Lactobacillus casei LC2W]
Length = 247
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI----DLGSGG 82
++ +Y + ++K+NL + D +++H DSL + + P + D+G+G
Sbjct: 27 DQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCDVGAGA 86
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP I I ++ + +++S K+ FL + VQ R + F + +
Sbjct: 87 GFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAK--K 141
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+P + D+++ARA+A LD L E P +
Sbjct: 142 SPHR-ASFDLVTARAVAALDVLAELCLPLV 170
>gi|225181153|ref|ZP_03734599.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
gi|225168122|gb|EEG76927.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
Length = 235
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 15 LLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPY 71
L T N++ E ++ E +Y ++ ++++NL + + I+H DSL V +
Sbjct: 8 LAKTRNITLPPEAPDRFEMYYRQLVEANRQVNLTRITEPAEVMIKHFLDSLEVLSACREF 67
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARG 125
+D+G+G G PGI I I + L++S K+ SFL+ +V T G
Sbjct: 68 KGPLLDVGTGAGLPGIPLKIACPQIS---LTLLDSSKKRVSFLKDLVSALELENVTVIHG 124
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q+ + +RA+A L+ L E P++ Q
Sbjct: 125 RAEDYARQD--DYREQFPFVVSRAVARLNVLAELCLPFVSQ 163
>gi|323340452|ref|ZP_08080708.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
gi|323092141|gb|EFZ34757.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
Length = 246
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIW 75
+S +++ +Y + ++ +NL + + ++ +++H DSL V L
Sbjct: 17 ELSDHQMQQFADYYEYLVAVNEHVNLTAITQKDEVYLKHFYDSLIPALTVKDLQTEALTL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKV 127
D+G+G GFP I I +++ V +++S NK+ FL + ++ R +
Sbjct: 77 CDVGAGAGFPSIPMKIAFPNLK---VTIVDSLNKRIRFLNDLSERLGLEEVEFHHGRAEE 133
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
FA + + + DV++ARA+A L L EY P
Sbjct: 134 FAGK---KSRHRESYDVVTARAVARLSVLSEYCLPL 166
>gi|116493781|ref|YP_805515.1| 16S rRNA methyltransferase GidB [Lactobacillus casei ATCC 334]
gi|122264764|sp|Q03CJ9|RSMG_LACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103931|gb|ABJ69073.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus casei ATCC 334]
Length = 243
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI----DLGSGG 82
++ +Y + ++K+NL + D +++H DSL + + P + D+G+G
Sbjct: 23 DQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP I I ++ + +++S K+ FL + VQ R + F + +
Sbjct: 83 GFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDRAEAFGAK--K 137
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+P + D+++ARA+A LD L E P +
Sbjct: 138 SPHR-ASFDLVTARAVAALDVLAELCLPLV 166
>gi|305664499|ref|YP_003860786.1| glucose-inhibited division protein B [Maribacter sp. HTCC2170]
gi|88708516|gb|EAR00752.1| glucose-inhibited division protein B [Maribacter sp. HTCC2170]
Length = 221
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L+ W+ KIN+VS +++ ++RHV SL ++ + P SI +D+G+GGGFPGI +I
Sbjct: 37 LYKDWNLKINVVSRKDIDELYLRHVLHSLGIAKIQEFKPGASI-LDVGTGGGFPGIPLAI 95
Query: 92 QLSSIEGGLVNLI 104
+ LV+ I
Sbjct: 96 LFPEADFTLVDSI 108
>gi|282856298|ref|ZP_06265579.1| 16S rRNA methyltransferase GidB [Pyramidobacter piscolens W5455]
gi|282585875|gb|EFB91162.1| 16S rRNA methyltransferase GidB [Pyramidobacter piscolens W5455]
Length = 228
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S +T+ +L + L ++++ L E W H+ED L V L P +D+G+G
Sbjct: 13 SAKTVTQLRRYASLLAVANERVRLTGPYDEETLWTDHIEDCLHVLPLLPPSGTVVDVGTG 72
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMIT 140
GG PG + ++ ++ L++ + K K + + +V R ++ A
Sbjct: 73 GGLPGAVLAVCRPDLKFTLLDSLSRKTK--ALAEIIAALKLPNAEVICMRSEDFAAARRE 130
Query: 141 TCDVISARALADLDTLLEYSFP 162
D RA+++ + EY P
Sbjct: 131 RYDAAVVRAVSEAGVIAEYLAP 152
>gi|197124872|ref|YP_002136823.1| methyltransferase GidB [Anaeromyxobacter sp. K]
gi|238689896|sp|B4UKF8|RSMG_ANASK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|196174721|gb|ACG75694.1| methyltransferase GidB [Anaeromyxobacter sp. K]
Length = 215
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
LE + L W++K+NL + + + +H+ DSL + + +D+GSG G PG+
Sbjct: 28 LERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLLPVLSGARTLLDVGSGAGLPGMP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM--ITTCDVIS 146
+ + V + KK +F++ V + + A R + P+ + D +
Sbjct: 88 LACARRDLS---VTCCDGVAKKIAFVKAVSAELDLPVRGVAVRAEGDPEREGLPRADAVV 144
Query: 147 ARALADLD 154
+RALAD D
Sbjct: 145 SRALADPD 152
>gi|161833806|ref|YP_001598002.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
GWSS]
gi|189040725|sp|A8Z655|RSMG_SULMW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152206296|gb|ABS30606.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
GWSS]
Length = 212
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGI 87
++KKIN++S++++ F+ RH+ SL V+++ + SI ID+G+GGGFPGI
Sbjct: 31 FNKKINIISNNSLNFFYERHILHSLCVYKICYFLNKSIIIDVGTGGGFPGI 81
>gi|160895497|ref|YP_001561079.1| 16S rRNA methyltransferase GidB [Delftia acidovorans SPH-1]
gi|160361081|gb|ABX32694.1| methyltransferase GidB [Delftia acidovorans SPH-1]
Length = 219
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-----QLHPYPS- 73
+++ ++ L F L KW+K NL + ++ H+ DSL L P+
Sbjct: 19 DLTPAQIDTLMEFQALLGKWNKVYNLTAVRDPQEMLTHHLLDSLAAVPALQRHLAQMPAR 78
Query: 74 ----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSGGG PG++ +I I+ V+ +++ KKA+F +Q+ AA ++
Sbjct: 79 EGRTAMLDVGSGGGLPGVVFAICCPQID---VHCVDTVGKKAAF----IQQAAATLRLPN 131
Query: 130 CR--IQEAPQMITTCDVISARALADLDTLLEYS 160
R Q+ T +IS RA A L +S
Sbjct: 132 LRGIHSRVEQLTTRYPLISCRAFASLADFTSWS 164
>gi|313640182|gb|EFS04772.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL S4-171]
Length = 238
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + + SI D
Sbjct: 17 LSEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHSIC-D 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I +E V++++ K+ +FL + +K A F A
Sbjct: 76 VGAGAGFPSIPIKICFPHLE---VSIVDXXXKRMTFLDALAEKLALTNVHFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 133 QNKAHREKYDLVTARAVARMSVLSELCLPLV 163
>gi|300314066|ref|YP_003778158.1| methyltransferase GidB [Herbaspirillum seropedicae SmR1]
gi|300076851|gb|ADJ66250.1| methyltransferase GidB (glucose inhibited division protein B)
protein [Herbaspirillum seropedicae SmR1]
Length = 139
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S L+KL + L KW+K NL + H+ DSL +D+G+
Sbjct: 25 LSDAQLDKLMAYQALLAKWNKVYNLTALRDPAQMVTHHLLDSLSAVSAFTGAQRVLDVGA 84
Query: 81 GGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYV 117
GGG PGI+ +I + + + + L+++ KK +FL V
Sbjct: 85 GGGLPGIVLAIWAAQAQPQMKITLVDTVQKKTAFLNQV 122
>gi|194334832|ref|YP_002016692.1| 16S rRNA methyltransferase GidB [Prosthecochloris aestuarii DSM
271]
gi|194312650|gb|ACF47045.1| methyltransferase GidB [Prosthecochloris aestuarii DSM 271]
Length = 221
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGG 83
+E+LE + L ++ INLVS IRHV SL V +P+ +DLG+GGG
Sbjct: 28 IEQLEEYARLLESINRSINLVSRKEESSLLIRHVFHSLLVGFHYPFQQGEKVLDLGTGGG 87
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PGI +I + LI++ KK R ++ T V A +I+ D
Sbjct: 88 LPGIPLAIAYPETD---FLLIDATGKKIDACREMI-TTLGLKNVHAKKIRAEELTGLMFD 143
Query: 144 VISARALADLDTLLEYS 160
V+ +R +A L L Y+
Sbjct: 144 VVLSRQVAPLRKLCRYA 160
>gi|302543971|ref|ZP_07296313.1| 16S rRNA methyltransferase GidB [Streptomyces hygroscopicus ATCC
53653]
gi|302461589|gb|EFL24682.1| 16S rRNA methyltransferase GidB [Streptomyces himastatinicus ATCC
53653]
Length = 237
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ + + L
Sbjct: 40 GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALTRPDLR---ITL 96
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FLR VV+ T RG R +E + V++ARA+A LD L
Sbjct: 97 LEPLLRRTNFLREVVELLGLEHVTVVRG-----RAEEVLGKLPPVHVVTARAVAPLDRLA 151
Query: 158 EYSFPWL 164
+ P L
Sbjct: 152 GWGVPLL 158
>gi|156311337|ref|XP_001617769.1| hypothetical protein NEMVEDRAFT_v1g225810 [Nematostella vectensis]
gi|156195704|gb|EDO25669.1| predicted protein [Nematostella vectensis]
Length = 288
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSG 81
E L + L+ +W+ KIN++S ++ + RHV SL + + + + ID+G+G
Sbjct: 1 EQLAQFGQLKELYAEWNDKINVISRKDIDQLYERHVLHSLSIAAVCHFDDGASIIDVGTG 60
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNK 109
GGFPGI +I ++E LV+ I K K
Sbjct: 61 GGFPGIPLAIYFPNVEFLLVDSIGKKIK 88
>gi|304413042|ref|ZP_07394515.1| glucose-inhibited cell-division protein B [Candidatus Regiella
insecticola LSR1]
gi|304283885|gb|EFL92278.1| glucose-inhibited cell-division protein B [Candidatus Regiella
insecticola LSR1]
Length = 189
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ YLL T ++ +K + +++ L KW+K NL S + IRH+ DS+ V
Sbjct: 4 KLEYLLATAKITLSDKQKQQLIHYVLLLDKWNKTYNLTSVRDPQQILIRHIMDSIVV--- 60
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
PY +ID+G+G G PGI +I I L++S K+ F
Sbjct: 61 KPYLKGEQFIDVGTGAGLPGIPLAIVCPDIH---FTLLDSLGKRVRF 104
>gi|158335573|ref|YP_001516745.1| methyltransferase GidB [Acaryochloris marina MBIC11017]
gi|189039368|sp|B0C384|RSMG_ACAM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158305814|gb|ABW27431.1| methyltransferase GidB [Acaryochloris marina MBIC11017]
Length = 256
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 26/168 (15%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---------- 68
+ + E ++ E + L ++ ++++NL + DFW +H+ DSL
Sbjct: 19 WQPTPEQEQQFERLFQLIVQANQQLNLTRITDPPDFWEKHLWDSLVGIAPWLQPDSSIQR 78
Query: 69 -------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
H +P ID+G+GGGFPG+ +I + + L++S KK +FL+ V +
Sbjct: 79 QVSFSVDHSHPLKVIDIGTGGGFPGLPIAIIKPTWR---ITLLDSTQKKLAFLQQVNAEL 135
Query: 122 AARGKVFACRI-----QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
C Q++P + D+ RA+ EY+ P L
Sbjct: 136 GLENVETCCDRAENLGQQSPYR-ESFDLAVIRAVGPASVCAEYALPLL 182
>gi|312868952|ref|ZP_07729132.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
gi|311095516|gb|EFQ53780.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
Length = 240
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR------VFQLHPYPS 73
N++ +++ +Y L + ++++NL + D +++H DSL Q P
Sbjct: 16 NLTDRQMQQFADYYQLLVTTNRQVNLTRITEENDVYLKHFYDSLTGAFAEPRLQTEQLP- 74
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D+G+G GFP + I ++ V +++S NK+ +FL+ +V K G
Sbjct: 75 -LCDIGAGAGFPSLPLKIAFPQLQ---VTIVDSLNKRINFLQELVAKLGLSGVTLVHDRA 130
Query: 134 EAPQMITTC-----DVISARALADLDTLLEYSFP 162
E D++ ARA+A L L E P
Sbjct: 131 ETFSAKKAANREKYDLVLARAVARLSVLAELCLP 164
>gi|326797438|ref|YP_004315258.1| ribosomal RNA small subunit methyltransferase G [Marinomonas
mediterranea MMB-1]
gi|326548202|gb|ADZ93422.1| Ribosomal RNA small subunit methyltransferase G [Marinomonas
mediterranea MMB-1]
Length = 208
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S TLE+L + L KW+K NL + + H+ DSL I ID+G
Sbjct: 17 SLSENTLEQLGRYLELLQKWNKAYNLTAIREADQMVSLHLIDSLSTVPFIKGDKI-IDVG 75
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G G PG++ +I L L++S KK FL V A E
Sbjct: 76 TGPGLPGMVLAICLPEKS---FTLLDSNGKKTRFLTQVKMDLGLENVTVANERVEKHANQ 132
Query: 140 TTCDVISARALADLDTLLEYSFP 162
D + +RA A L+ ++ + P
Sbjct: 133 GQYDHVISRAFASLEDMINWCLP 155
>gi|325688172|gb|EGD30191.1| glucose inhibited division protein B [Streptococcus sanguinis SK72]
Length = 237
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIENQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|253690609|ref|YP_003019799.1| methyltransferase GidB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259495499|sp|C6DJG4|RSMG_PECCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|251757187|gb|ACT15263.1| methyltransferase GidB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 206
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S + +RH+ DS+ V + H + +ID+G+G G PGI +I
Sbjct: 33 KWNKAYNLTSVRDPQQMLVRHIMDSI-VVEPHLHGQRFIDVGTGPGLPGIPLAIVRPDSH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ FLR V + R++E P VIS RA A L +
Sbjct: 92 ---FTLLDSLGKRVRFLRQVQHELQLENITPVQSRVEEFPAEPPFDGVIS-RAFASLHDM 147
Query: 157 LEY 159
+ +
Sbjct: 148 ISW 150
>gi|319440492|ref|ZP_07989648.1| glucose-inhibited division protein B [Corynebacterium variabile DSM
44702]
Length = 221
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V+ W RH+ +S + ++ + +D+GSG G PGI +I + V L
Sbjct: 45 GLIGPREVDRLWDRHILNSAVIGEVIDDGARVVDIGSGAGLPGIPLAIARPDLR---VQL 101
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYS 160
+E ++A+FL VV+ +V R +E + DV+++RA+A + L+ +S
Sbjct: 102 VEPLLRRATFLSEVVEDLGLDNVEVHRGRAEEKSIVTAVGGADVVTSRAVAPVGRLMGWS 161
Query: 161 FP 162
P
Sbjct: 162 LP 163
>gi|227534572|ref|ZP_03964621.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187821|gb|EEI67888.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 247
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI----DLGSGG 82
++ +Y + ++K+NL + D +++H DSL + + P + D+G+G
Sbjct: 27 DQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQVMSVCDVGAGA 86
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP I I ++ + +++S K+ FL + VQ R + F + +
Sbjct: 87 GFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDRAETFGAK--K 141
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+P + D+++ARA+A LD L E P +
Sbjct: 142 SPHR-ASFDLVTARAVAALDVLAELCLPLV 170
>gi|307747896|gb|ADN91166.1| Ribosomal RNA small subunit methyltransferase G [Campylobacter
jejuni subsp. jejuni M1]
Length = 188
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L + +L E KKA+FLR + ++ + ++ ++QE Q I D
Sbjct: 75 PAVFLAFLLQNN----FHLFEPNPKKAAFLRTLKIECELSNLHIYKEKVQEY-QNIFKAD 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDVKPLLE 144
>gi|26554254|ref|NP_758188.1| glucose-inhibited division protein GidB [Mycoplasma penetrans HF-2]
gi|29336687|sp|Q8EUW9|RSMG_MYCPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|26454263|dbj|BAC44592.1| glucose-inhibited division protein GidB [Mycoplasma penetrans HF-2]
Length = 237
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 36 FLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---DLGSGGGFPGIITSI 91
+L+ KI NL E+ + ++ +S+ F + + I D+GSG G PGI I
Sbjct: 32 YLQQENKIHNLTRLDKEEEIYQKYFYESILNFHNDLFDNKNINLLDIGSGSGVPGIFLKI 91
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARA 149
I + ++ES KK +FL +V K + + E I D+I+ RA
Sbjct: 92 LFPHIN---LYIVESNTKKVNFLNNLVDKLELENVFISNQRCEDYIKDKIEFFDLITCRA 148
Query: 150 LADLDTLLEYSFPWL 164
+A+L LLE SFP L
Sbjct: 149 VAELRILLELSFPGL 163
>gi|294102832|ref|YP_003554690.1| methyltransferase GidB [Aminobacterium colombiense DSM 12261]
gi|293617812|gb|ADE57966.1| methyltransferase GidB [Aminobacterium colombiense DSM 12261]
Length = 229
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++ + LE + + +S ++ L E W H+ D L L P ID+G
Sbjct: 12 EIAEHNRKALETYIDGLVSFSGRVRLTGPQDRETLWSEHILDCLYSVPLLPQEGDIIDVG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACR 131
+GGG PG++ +I + + L++S KK L + V +R + FA
Sbjct: 72 TGGGLPGMVWAICRPDLH---ITLLDSVKKKCVALEELSGLLHLKNVTIICSRAEEFALS 128
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+E T + ARA+ LLEY P++ Q
Sbjct: 129 RRE------TFSLAGARAVKGAGVLLEYLSPFVAQ 157
>gi|329894822|ref|ZP_08270622.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC3088]
gi|328922716|gb|EGG30050.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC3088]
Length = 218
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L KW+K NL + +++ ++H+ DSL V + +D+G+G G P +
Sbjct: 29 QLLTYLSLLQKWNKAYNLTAIRDIDEMLVKHILDSLSVAPFCGAATSLLDIGAGAGLPSV 88
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ +I G V+ ++S KK F++ V + V R A + TT D++
Sbjct: 89 VLAI---VYPGMRVSGLDSNIKKTRFMQQVGYELNLTNFHVLHARADTA-DLSTTFDIVI 144
Query: 147 ARALADLDTLLEYSFPWL 164
+RA + + + P L
Sbjct: 145 SRAFSSFSDFVTLALPRL 162
>gi|313674430|ref|YP_004052426.1| 16S rRNA m(7)g-527 methyltransferase [Marivirga tractuosa DSM 4126]
gi|312941128|gb|ADR20318.1| 16S rRNA m(7)G-527 methyltransferase [Marivirga tractuosa DSM 4126]
Length = 207
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGFPGIITSIQL 93
L+ +W++KIN++S +E+ + +H+ +L + + I D+G+GGGFPGI +I
Sbjct: 28 LYAEWNEKINVISRKDIENIYEKHILHALAIAKFQNLSGKKILDVGTGGGFPGIPLAILF 87
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADL 153
+ L++S KK ++ V + Q A + D + +RA+ +
Sbjct: 88 PDAQ---FTLVDSIGKKIKVVKAVAESLGLEN--VEAYHQRAEKTKGKFDFVVSRAVTRM 142
Query: 154 DTLLEYSFPWLYQK 167
+ L W+ QK
Sbjct: 143 KSFLH----WINQK 152
>gi|258593685|emb|CBE70026.1| putative Methyltransferase gidB (Glucose-inhibited division protein
B) [NC10 bacterium 'Dutch sediment']
Length = 249
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSI-WIDLGSG 81
E + + +W+ +INL + E+ IR E LR P PS+ ID+GSG
Sbjct: 44 EAFDIYLSELRRWASQINLTGLRS-EEAIIR--EGFLRSLAHRAAFEPAPSVKAIDVGSG 100
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
GFPG++ + IE + L+E + K+A+FLR +++
Sbjct: 101 AGFPGLVLKMGYPDIE---IVLLEPRRKRAAFLRSTIRR 136
>gi|322386902|ref|ZP_08060526.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
gi|321269184|gb|EFX52120.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
Length = 246
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 32 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQELKLLDIGAGAG 91
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 92 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFR 148
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 149 AQFDLVTARAVARMQVLSELTIPYL 173
>gi|296157545|ref|ZP_06840380.1| methyltransferase GidB [Burkholderia sp. Ch1-1]
gi|295892317|gb|EFG72100.1| methyltransferase GidB [Burkholderia sp. Ch1-1]
Length = 227
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPY-PSIWID 77
++S L KL + L KW+ NL + I+H+ DSL + L P PS +D
Sbjct: 27 DLSDAQLGKLLDYVALLSKWNAVYNLTAIRDPRQMLIQHILDSLAIVPHLAPLGPSSVLD 86
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRI- 132
+GSGGG PGI+ +I L V + + +KK +F Q A G V R+
Sbjct: 87 VGSGGGLPGIVLAIVLPDWT---VTVNDIVHKKTAFQ---AQAKAELGLANLSVVTGRVE 140
Query: 133 --QEAPQMITTCDVISARALADL 153
Q ++ DVI +RA A+L
Sbjct: 141 SLQPGAEVPAKFDVIVSRAFAEL 163
>gi|326564042|gb|EGE14286.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 12P80B1]
gi|326570508|gb|EGE20548.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis BC8]
Length = 225
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWIDLG 79
+ ++ L Y L L W K NL + + ++ ++H+ D + + + P+ + +D+G
Sbjct: 34 QNMQILRYLDGLLL-WGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNKSLLDIG 92
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQ-EAPQ 137
+G G P +I +I ++ ++S KK F+R + + + + A RI+ Q
Sbjct: 93 TGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNIMPIASRIEHHHAQ 149
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
DVI++RA A L + + P L
Sbjct: 150 KAGAYDVITSRAFASLTDFVSLATPCL 176
>gi|315506963|ref|YP_004085850.1| methyltransferase gidb [Micromonospora sp. L5]
gi|315413582|gb|ADU11699.1| methyltransferase GidB [Micromonospora sp. L5]
Length = 362
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ + V + P + ID+GSG G PG++ +I + V L
Sbjct: 160 GLIGPRETPRLWERHLLNCAVVAERIPEGASVIDVGSGAGLPGLVLAIARPDL---TVTL 216
Query: 104 IESKNKKASFLRYVVQKTA-ARG-KVFACRIQEAP-----QMITTCDVISARALADLDTL 156
+E ++ +FL VQ+ R +VF R +EA + + D+++ARA+A LD L
Sbjct: 217 VEPLARRTAFLIEAVQRLGLTRDVRVFRGRAEEAAAGSRDREPLSADIVTARAVAPLDRL 276
Query: 157 LEYSFPWLYQ 166
+ P +
Sbjct: 277 ASWCLPLVAP 286
>gi|332995870|gb|AEF05925.1| glucose-inhibited division protein B [Alteromonas sp. SN2]
Length = 214
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 11/158 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ IL + + +S + KL F L KW+K NL S + ++H+ DSL ++
Sbjct: 8 HEILASGLAAQSLQLSDDQQAKLVGFVLLIDKWNKAYNLTSVRDPKQMMVKHILDSLAIY 67
Query: 67 QLHPY-----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
PY ID+G+G G PG+ +I L++S K+ F+ V
Sbjct: 68 ---PYLAKHEAKHIIDVGTGPGLPGMPLAIAFPDTA---FTLLDSLGKRVRFMTQCVHTL 121
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
EA D++ +RA A L +L +
Sbjct: 122 KLSNVTPVQSRVEAHTPAQPYDIVLSRAFASLKDMLHW 159
>gi|317968952|ref|ZP_07970342.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CB0205]
Length = 242
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 23 RETLEKLEYFYFL---FLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI--- 74
R + ++L+ F L +W+ ++NL +DFWI + DSL V QL P
Sbjct: 15 RPSDDQLQRFLQLQEELRQWNSRVNLTRLVEGDDFWIAQIFDSLWPLVPQLQANPEAALR 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
ID+G+GGGFPG+ +I + + L++S +K + + Q
Sbjct: 75 CIDVGTGGGFPGLAVAIAFPQAQ---LTLVDSVGRKTQAVEAMAQ 116
>gi|302870726|ref|YP_003839363.1| methyltransferase [Micromonospora aurantiaca ATCC 27029]
gi|302573585|gb|ADL49787.1| methyltransferase GidB [Micromonospora aurantiaca ATCC 27029]
Length = 362
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ + V + P + ID+GSG G PG++ +I + V L
Sbjct: 160 GLIGPRETPRLWERHLLNCAVVAERIPEGASVIDVGSGAGLPGLVLAIARPDL---TVTL 216
Query: 104 IESKNKKASFLRYVVQKTA-ARG-KVFACRIQEAP-----QMITTCDVISARALADLDTL 156
+E ++ +FL VQ+ R +VF R +EA + + D+++ARA+A LD L
Sbjct: 217 VEPLARRTAFLIEAVQRLGLTRDVRVFRGRAEEAAAGSRDREPLSADIVTARAVAPLDRL 276
Query: 157 LEYSFPWLYQ 166
+ P +
Sbjct: 277 ASWCLPLVAP 286
>gi|169632024|ref|YP_001705673.1| methyltransferase GidB (glucose-inhibited division protein B)
[Mycobacterium abscessus ATCC 19977]
gi|169243991|emb|CAM65019.1| Methyltransferase GidB (glucose-inhibited division protein B)
[Mycobacterium abscessus]
Length = 234
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 19/143 (13%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+EY L ++ L+ W RH+ +S + +L ID+GSG G PGI
Sbjct: 25 VEYVAALATIGVER-GLIGPRETGRLWGRHILNSAVLGELLEAGERVIDVGSGAGLPGIP 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMIT-- 140
I + G+V L+E ++ FLR ++++ + RG+ E P +I
Sbjct: 84 LGIARPDV--GIV-LVEPMLRRTEFLREMIEQLGLTNVSVVRGRA------EEPAVIAEV 134
Query: 141 -TCDVISARALADLDTLLEYSFP 162
D +++RA+A LD + +S P
Sbjct: 135 GGADAVTSRAVAALDKIARWSLP 157
>gi|24115043|ref|NP_709553.1| 16S rRNA methyltransferase GidB [Shigella flexneri 2a str. 301]
gi|32699527|sp|Q83PJ7|RSMG_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24054303|gb|AAN45260.1| glucose-inhibited division protein GidB [Shigella flexneri 2a str.
301]
Length = 207
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+GSG G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGSGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|326329119|ref|ZP_08195448.1| 16S rRNA methyltransferase GidB [Nocardioidaceae bacterium Broad-1]
gi|325953201|gb|EGD45212.1| 16S rRNA methyltransferase GidB [Nocardioidaceae bacterium Broad-1]
Length = 237
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PG++ +I ++ + L
Sbjct: 38 GLIGPREVPRLWDRHILNCAVLGEVIPEGVAVADIGSGAGLPGLVLAIARPDLQ---ITL 94
Query: 104 IESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
IE ++ +FL V + T RG+ A + DV+++RA+A L LL
Sbjct: 95 IEPLLRRTTFLEEVAEDLGLENVTVLRGRADAFHGE------LGFDVVTSRAVAGLGKLL 148
Query: 158 EYSFP 162
++S P
Sbjct: 149 DWSMP 153
>gi|219871647|ref|YP_002476022.1| 16S rRNA methyltransferase GidB [Haemophilus parasuis SH0165]
gi|254766893|sp|B8F6X2|RSMG_HAEPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219691851|gb|ACL33074.1| methyltransferase, glucose-inhibited division protein B
[Haemophilus parasuis SH0165]
Length = 203
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 11 RANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ N+ + + ++L F L KW+K NL S ++ ++H+ DSL V Q
Sbjct: 4 KLDRLLSQANIPLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDSLVVSQ- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H +ID+G+G G PGI +I ++ + V L++S K+ +F++ +++
Sbjct: 63 HLQGQQFIDVGTGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNAIRELKLTNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
R++E + D + +RA A L+ ++++ +
Sbjct: 120 VLSRVEEYQE--QQFDGVLSRAFASLNDMVDWCY 151
>gi|294055675|ref|YP_003549333.1| methyltransferase GidB [Coraliomargarita akajimensis DSM 45221]
gi|293615008|gb|ADE55163.1| methyltransferase GidB [Coraliomargarita akajimensis DSM 45221]
Length = 217
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
NV T L + L +W++KINL+S +E RH+ L + +L I +
Sbjct: 10 NVDDGTWTLLAEWATLLREWNEKINLISRKDIEHLEERHLAHCLVITNHLRLMNGARI-M 68
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+GGGFPG+I +I + L++S KK + + ++ R + CR A
Sbjct: 69 DVGTGGGFPGLIMAICYPQAQ---FTLVDSIGKKIGVVADIAERLGLRNVEARQCR---A 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
+ D I+ RA+ +L EY F W+
Sbjct: 123 ESIRKEFDFITGRAVKNLP---EY-FSWI 147
>gi|284007081|emb|CBA72356.1| methyltransferase (glucose-inhibited division protein B)
[Arsenophonus nasoniae]
Length = 208
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ + +++L + L KW+K NL S + E IRH+ DS+ + + +ID+G+
Sbjct: 18 LTDQQIQQLIAYIELLNKWNKAYNLTSIRSPEQMIIRHILDSI-IVDKYLVGKRFIDVGT 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PGI +I + L++S K+ FLR + + + + E Q +
Sbjct: 77 GPGLPGIPLAIVRPNAH---FTLLDSLGKRVRFLRQIQHELMLKNIEPIQKRVEQYQPVE 133
Query: 141 TCDVISARALADLDTLLEY 159
D I +RA A + +L +
Sbjct: 134 KFDGIVSRAFASIQDMLSW 152
>gi|260885222|ref|ZP_05896795.1| 16S rRNA methyltransferase GidB [Prevotella tannerae ATCC 51259]
gi|260853054|gb|EEX72923.1| 16S rRNA methyltransferase GidB [Prevotella tannerae ATCC 51259]
Length = 210
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDL 78
R E+L+ Y W+ KIN++S +++ + HV SL + + P + +DL
Sbjct: 18 QRVQFEQLDALYH---DWNSKINVISRKDIDNLYEHHVLHSLGIAKALRFRPETEV-MDL 73
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
G+GGGFPGI +I + L++ I K K AS
Sbjct: 74 GTGGGFPGIPLAILFPEVRFTLLDSIGKKIKVAS 107
>gi|94986875|ref|YP_594808.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Lawsonia intracellularis PHE/MN1-00]
gi|193806444|sp|Q1MR90|RSMG_LAWIP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94731124|emb|CAJ54486.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Lawsonia intracellularis
PHE/MN1-00]
Length = 216
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------LRVFQLHPYP 72
+++S + +E L + L KW+K +NLV +T + + DS +R L P
Sbjct: 21 FSLSDQEIESLRGYLCLLTKWNKVMNLVGFTTWKTICSNLIIDSFHLAIFIRSLSLPTDP 80
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-QKTAARGKVFACR 131
W D GSG G PGI I G L+ES+ K+A FL+ ++ Q + V+ R
Sbjct: 81 LCW-DFGSGAGLPGIPLRIIWKE---GSYWLVESREKRAIFLKTLLAQYPLTQTYVYCGR 136
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSF-PW 163
++E M+ C L+D+ ++ +F PW
Sbjct: 137 VEEF--MLANC-------LSDVALIVSRAFMPW 160
>gi|159040586|ref|YP_001539839.1| 16S rRNA methyltransferase GidB [Salinispora arenicola CNS-205]
gi|189040819|sp|A8LXK0|RSMG_SALAI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157919421|gb|ABW00849.1| methyltransferase GidB [Salinispora arenicola CNS-205]
Length = 242
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ + + P + +D+GSG G PG++ ++ + V L
Sbjct: 43 GLIGPREAPRLWDRHLLNCAAATERIPLGATVVDVGSGAGLPGLVLAVARPDLS---VVL 99
Query: 104 IESKNKKASFLRYVVQK-------TAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
+E ++ +FL V++ RG+ + A T DV++ARA+A LD L
Sbjct: 100 VEPLARRTAFLVEAVEQLELGASVRVVRGRAEEVAVGGAGVEPLTGDVVTARAVAPLDRL 159
Query: 157 LEYSFPWLY 165
+ P +
Sbjct: 160 ARWCLPLVV 168
>gi|167854765|ref|ZP_02477543.1| methyltransferase GidB [Haemophilus parasuis 29755]
gi|167854063|gb|EDS25299.1| methyltransferase GidB [Haemophilus parasuis 29755]
Length = 203
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 11 RANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ N+ + + ++L F L KW+K NL S ++ ++H+ DSL V Q
Sbjct: 4 KLDRLLSQANIPLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDSLVVSQ- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H +ID+G+G G PGI +I ++ + V L++S K+ +F++ +++
Sbjct: 63 HLQGQQFIDVGTGPGLPGIPLAI--ANPDKQFV-LLDSLGKRITFIKNAIRELKLTNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
R++E + D + +RA A L+ ++++ +
Sbjct: 120 VLSRVEEYQE--QQFDGVLSRAFASLNDMVDWCY 151
>gi|326560412|gb|EGE10794.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 7169]
gi|326564015|gb|EGE14260.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 103P14B1]
gi|326576131|gb|EGE26047.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 101P30B1]
gi|326577084|gb|EGE26978.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis O35E]
Length = 225
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWIDLG 79
+ ++ L Y L L W K NL + + ++ ++H+ D + + + P+ + +D+G
Sbjct: 34 QNMQILRYLDGLLL-WGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNKSLLDIG 92
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-EAPQ 137
+G G P +I +I ++ ++S KK F+R + + + A RI+ Q
Sbjct: 93 TGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNITPIASRIEHHHAQ 149
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
DVI++RA A L + + P L
Sbjct: 150 KAGAYDVITSRAFASLTDFVSLATPCL 176
>gi|323700146|ref|ZP_08112058.1| glucose inhibited division protein [Desulfovibrio sp. ND132]
gi|323460078|gb|EGB15943.1| glucose inhibited division protein [Desulfovibrio desulfuricans
ND132]
Length = 225
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----HPYPSI 74
+++ + E L + +KW++K+NLV S + R V DSL + P +
Sbjct: 21 DLAPDRAELLAAYLDQLMKWNRKMNLVGPSDWRTVFDRLVVDSLFLADFVTGLRLPERPL 80
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQ 133
+D G+G G PGI + + G L+E + K+A+F++ V+ + VF R +
Sbjct: 81 CLDFGAGAGLPGIPLRVLW---QDGDYWLVEVREKRATFMKSVLGRLDLPATNVFLGRAE 137
Query: 134 EAPQMIT------TCDVISARALADLDTLLEYSFPWLYQ 166
+A ++ T D+I +RA LL++ P L +
Sbjct: 138 DALDRLSRSGHQATADLILSRAFMPWQKLLDFIHPMLRR 176
>gi|91785744|ref|YP_560950.1| glucose inhibited division protein [Burkholderia xenovorans LB400]
gi|123062449|sp|Q13SP1|RSMG_BURXL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91689698|gb|ABE32898.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia xenovorans
LB400]
Length = 227
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPY-PSIWIDL 78
+S L KL + L KW+ NL + I+H+ DSL + L P PS +D+
Sbjct: 28 LSDAQLGKLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLAPLGPSSVLDV 87
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRI-- 132
GSGGG PGI+ +I L V + + +KK +F Q A G V R+
Sbjct: 88 GSGGGLPGIVLAIVLPEWT---VTVNDIVHKKTAFQ---AQGKAELGLANLSVVTGRVES 141
Query: 133 -QEAPQMITTCDVISARALADL 153
Q ++ DVI +RA A+L
Sbjct: 142 LQPGAEVPAKFDVIVSRAFAEL 163
>gi|297200933|ref|ZP_06918330.1| 16S rRNA methyltransferase GidB [Streptomyces sviceus ATCC 29083]
gi|197716895|gb|EDY60929.1| 16S rRNA methyltransferase GidB [Streptomyces sviceus ATCC 29083]
Length = 238
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 28 YAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E +T V+
Sbjct: 88 VREDLK---ITLLEPLLRRTTFLTEVVELLGLDHVTVVRG-----RAEEVMGKLTPVHVV 139
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLATWGVPLL 158
>gi|220919590|ref|YP_002494894.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-1]
gi|254766874|sp|B8JDK2|RSMG_ANAD2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219957444|gb|ACL67828.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-1]
Length = 215
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
LE + L W++K+NL + + + +H+ DSL + +D+GSG G PGI
Sbjct: 28 LERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLLPFLTGAGTLLDVGSGAGLPGIP 87
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM--ITTCDVIS 146
+ + V + KK +F++ V + + A R + P+ + D +
Sbjct: 88 LACARRDLS---VTCCDGVAKKIAFVKAVSAELDLPVRGVAVRAEGEPEREGLPRADAVV 144
Query: 147 ARALADLD 154
+RALA+ D
Sbjct: 145 SRALAEPD 152
>gi|86606331|ref|YP_475094.1| 16S rRNA methyltransferase GidB [Synechococcus sp. JA-3-3Ab]
gi|123506189|sp|Q2JTZ8|RSMG_SYNJA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86554873|gb|ABC99831.1| methyltransferase GidB [Synechococcus sp. JA-3-3Ab]
Length = 260
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSIWIDLGSGGGFP 85
Y L + ++ NL + DFW +H+ DSLR +L P ID+G+G GFP
Sbjct: 41 YSLVMAGNRTQNLTRITDPIDFWEKHLWDSLRGLRLLGSWDEIQAQPWRGIDIGTGAGFP 100
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
GI I L L++S +K +F++ V+Q+
Sbjct: 101 GIPAQIALPQAH---FTLLDSSQRKIAFVQEVLQQ 132
>gi|326561363|gb|EGE11719.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 46P47B1]
Length = 224
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWIDLG 79
+ ++ L Y L L W K NL + + ++ ++H+ D + + + P+ + +D+G
Sbjct: 34 QNMQILRYLDGLLL-WGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNKSLLDIG 92
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-EAPQ 137
+G G P +I +I ++ ++S KK F+R + + + A RI+ Q
Sbjct: 93 TGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNITPIASRIEHHHAQ 149
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
DVI++RA A L + + P L
Sbjct: 150 KAGAYDVITSRAFASLTDFVSLATPCL 176
>gi|253581095|ref|ZP_04858355.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847631|gb|EES75601.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 236
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGII 88
FY ++ +K +NL + E+ +H DSL + + +I +D+G+G GFPG+
Sbjct: 26 FYEFLVEKNKVMNLTGITEFEEVLTKHFLDSLACVKAIDMTKVKTI-MDIGTGAGFPGVP 84
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMITTCDV 144
I +E L++S K+ +FL + G K R +E + D+
Sbjct: 85 LKIAFPHLE---ACLLDSLKKRVNFLEESFELLGLEGIKAIHGRAEEYAKNKEYREKYDL 141
Query: 145 ISARALADLDTLLEYSFPWL 164
+RA+++L TL EY P++
Sbjct: 142 CVSRAVSNLATLSEYCLPYV 161
>gi|228471211|ref|ZP_04056024.1| 16S rRNA methyltransferase GidB [Porphyromonas uenonis 60-3]
gi|228307026|gb|EEK16108.1| 16S rRNA methyltransferase GidB [Porphyromonas uenonis 60-3]
Length = 224
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWI--D 77
+S ++L Y L+ +W+ +IN++S +++ ++ HV SL + L P P+ + D
Sbjct: 23 LSPTATQQLTALYPLYREWNARINVISRRDIDNLYLHHVMHSLALAWLLPDEPTSFTIAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---AARGKVFACRIQE 134
+G GGGFP I +I + L++ I K A + + T +V +C +
Sbjct: 83 VGCGGGFPSIPLAILFPQYQFLLIDSIAKKLHVAQSIADEIGLTNVSTHHTRVESCDL-- 140
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
CD + +RA L+ L +Y+
Sbjct: 141 ------CCDYVVSRAAMPLELLHKYT 160
>gi|254291138|ref|ZP_04961935.1| hypothetical protein A33_0021 [Vibrio cholerae AM-19226]
gi|150422983|gb|EDN14933.1| hypothetical protein A33_0021 [Vibrio cholerae AM-19226]
Length = 210
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ V+ + E+L + + KW+K NL S + ++H+ DSL V H +I
Sbjct: 15 TSLTVTEQQREQLVGYVQMLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFI 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE- 134
D+G+G G PGI +I E L++S K+ FL+ V+ + + R++E
Sbjct: 74 DVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHELKINNVLPVQSRVEEF 130
Query: 135 APQMITTCDVISARALADLDTLLEY 159
P+ + DV+ +RA A + ++ +
Sbjct: 131 DPE--SGFDVVLSRAFASMTDMVNW 153
>gi|149199436|ref|ZP_01876472.1| glucose-inhibited division protein B [Lentisphaera araneosa
HTCC2155]
gi|149137514|gb|EDM25931.1| glucose-inhibited division protein B [Lentisphaera araneosa
HTCC2155]
Length = 223
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----IDLGSGG 82
+K E Y + K ++ NL ++ EDF IRH+ DS+ +P + +DLG GG
Sbjct: 24 QKAEEIYQVVTKINETHNLTRITSPEDFKIRHLIDSICSVAYYPELATESLKILDLGCGG 83
Query: 83 GFPGIITSI---QLS----SIEGGLVNLIESKNKKASFLRYVVQKT-AARGKVFACRIQE 134
GFP I S QL EG V + + AS L KT ARG+ A + +
Sbjct: 84 GFPCIPLSAYNPQLDITGLDSEGTKVKCV---AQAASELGLSNLKTIHARGRELAIKEEH 140
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q D+++ARA+A D L++ +L K
Sbjct: 141 KAQY----DIVTARAVATADKLIKECRQFLKPK 169
>gi|29830853|ref|NP_825487.1| 16S rRNA methyltransferase GidB [Streptomyces avermitilis MA-4680]
gi|29607966|dbj|BAC72022.1| putative 16S ribosomal RNA small subunit methyltransferase
[Streptomyces avermitilis MA-4680]
Length = 246
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETL-----EKLEYFYFLFLKWSKKINLVSSSTVEDFW 55
M+Y + + A L +RE + + Y L ++ L+ V W
Sbjct: 1 MRYGRTVPVTEAAELPPAPEQAREVFGDRFADAVRYAELLAEAGVQR-GLIGPREVPRLW 59
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL
Sbjct: 60 ERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVREDLK---ITLLEPLLRRTNFLT 116
Query: 116 YVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
VV+ T RG R +E I V++ARA+A LD L + P L
Sbjct: 117 EVVELLGLDHVTVIRG-----RAEEVMGKIPPVHVVTARAVAPLDRLATWGIPLL 166
>gi|300689822|ref|YP_003750817.1| glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum PSI07]
gi|299076882|emb|CBJ49495.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum PSI07]
Length = 223
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A + L++L + L KW++ NL + D H+ DSL
Sbjct: 7 ADTRSELDAGARALGLPLDAAQLDRLLAYQVLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 66
Query: 64 R--------VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
V ++ P +D+GSGGG PGI +I I +V++++ KK +FL
Sbjct: 67 AAVPRIAGLVRRVQPEAPRVLDVGSGGGLPGIPLAIACPDIGVTMVDIVQ---KKTAFL 122
>gi|238899344|ref|YP_002925027.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229467105|gb|ACQ68879.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 211
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N+S E +K+ + L +W+K N S ++ I+HV DS+ V PY +ID
Sbjct: 15 NLSEEQKQKIISYIELLCQWNKTYNFTSVHDPKEMLIKHVLDSIIV---APYLKGRKFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+G+G G PG++ +I L L++S K+ FLR V Q
Sbjct: 72 VGTGPGLPGLLLAIVLPDSH---FTLLDSIGKRICFLRQVQQ 110
>gi|87122926|ref|ZP_01078791.1| glucose-inhibited division protein B [Marinomonas sp. MED121]
gi|86161799|gb|EAQ63099.1| glucose-inhibited division protein B [Marinomonas sp. MED121]
Length = 210
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGG 82
T++KL + L KW+K NL + V+ H+ DSL PY ID+G+G
Sbjct: 22 TIQKLVDYLALLQKWNKAYNLTAIRDVDQMIALHLIDSLSTI---PYIQGDKIIDVGTGP 78
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
G PG++ +I L++S KK FL V + A E
Sbjct: 79 GLPGMVLAICFPE---KAFTLLDSNGKKTRFLTQVKMELGVDNVTVANERVELHAQAGQY 135
Query: 143 DVISARALADLDTLLEYSFP 162
D + +RA A L ++ ++ P
Sbjct: 136 DHVISRAFASLQDMINWTLP 155
>gi|325954874|ref|YP_004238534.1| ribosomal RNA small subunit methyltransferase G [Weeksella virosa
DSM 16922]
gi|323437492|gb|ADX67956.1| Ribosomal RNA small subunit methyltransferase G [Weeksella virosa
DSM 16922]
Length = 209
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
+++++ +E+L L+ +W+++IN+VS ++ ++ H+ SL + ++ + S +D
Sbjct: 11 SLTKKQIEQLSRLGDLYKEWNEQINVVSRKDIDKLYVNHILHSLAIAKVMEFTDGSKVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--A 135
+G+GGG PGI +I ++ LV+ I K K VV A + + ++ A
Sbjct: 71 VGTGGGLPGIPLAILFPNVHFHLVDSIGKKIK-------VVHAIATSLGLENVKAEQKRA 123
Query: 136 PQMITTCDVISARALADLDTLLEY 159
+ D + +RA+ + +E+
Sbjct: 124 ESLTDQYDFVVSRAVTAMPKFVEW 147
>gi|15828599|ref|NP_325959.1| glucose-inhibited division protein B [Mycoplasma pulmonis UAB CTIP]
gi|20177898|sp|Q98R82|RSMG_MYCPU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14089541|emb|CAC13301.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Mycoplasma pulmonis]
Length = 227
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSI 74
T ++T +LE F L + +KKINL S + W + +S++ L P+
Sbjct: 8 TNEYGQKTASRLEQFVKLIEEENKKINLTSFEG-QRLWQEGIYESIKC--LEPFVKSNDS 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G GFP + I ++ + +IES K+ FL V + ++F R++
Sbjct: 65 LLDIGAGVGFPSVPFLIVNPEVK---LTIIESNKKRVLFLEKVKKDLNLSFEIFNGRVEN 121
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
+ I D I+ARALA L+ L+E +
Sbjct: 122 FNKEI-HFDFITARALAPLNILMELT 146
>gi|88860626|ref|ZP_01135263.1| glucose-inhibited division protein B [Pseudoalteromonas tunicata
D2]
gi|88817221|gb|EAR27039.1| glucose-inhibited division protein B [Pseudoalteromonas tunicata
D2]
Length = 206
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ N LL ++ L+K + ++ L KW+K NL S + ++H+ DSL V
Sbjct: 5 KLNQLLAQTSIELTQLQKQQLVKYVELLNKWNKAYNLTSVRDPNEMMVKHILDSL-VVAP 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H +ID+G+G G PG++ +I L + L++S K+ FL V +
Sbjct: 64 HLPGKHYIDVGTGPGLPGVVLAIALPDTQ---FILLDSLGKRVRFLTQVKHELGLSNISP 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEY 159
R+++ Q D + +RA A L ++++
Sbjct: 121 VQSRVEDF-QPPVKLDGVLSRAFASLQDMVDW 151
>gi|238753971|ref|ZP_04615330.1| Ribosomal RNA small subunit methyltransferase G [Yersinia ruckeri
ATCC 29473]
gi|238707723|gb|EEQ00082.1| Ribosomal RNA small subunit methyltransferase G [Yersinia ruckeri
ATCC 29473]
Length = 207
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S E IRH+ DS+ V H +ID+G+G G PG
Sbjct: 23 QQLVGYVELLHKWNKAYNLTSVRDPEQMLIRHILDSI-VVNPHLQGQRFIDVGTGPGLPG 81
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
I +I L++S K+ FLR V + + R+++ VI
Sbjct: 82 IPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLNNIEPVQSRVEDFSGEPGFDGVI 138
Query: 146 SARALADLDTLLEY 159
S RA A LD +L +
Sbjct: 139 S-RAFASLDDMLSW 151
>gi|257452320|ref|ZP_05617619.1| glucose inhibited division protein B [Fusobacterium sp. 3_1_5R]
gi|317058863|ref|ZP_07923348.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
3_1_5R]
gi|313684539|gb|EFS21374.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
3_1_5R]
Length = 234
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDL 78
++S + +E L + L L++++ NL + + +H+ DSL + + P + ID+
Sbjct: 15 SLSEKQIENLLTYVTLLLEYNQHTNLTAIREEKAVIEKHILDSLLLQEYIPKDATTAIDI 74
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+G GFPG++ +I ++ L++S KK FL +V + + +V R ++ Q
Sbjct: 75 GTGAGFPGMVLAICNPTV---YFTLMDSVGKKTKFLEWVKENLKLQNVEVINARAEDYIQ 131
Query: 138 MITT---CDVISARALADLDTLLEYSFPWL 164
+ D+ R ++ L +LEY P+L
Sbjct: 132 ISKRREYYDLGFCRGVSKLAVILEYMIPFL 161
>gi|302880135|ref|YP_003848699.1| methyltransferase GidB [Gallionella capsiferriformans ES-2]
gi|302582924|gb|ADL56935.1| methyltransferase GidB [Gallionella capsiferriformans ES-2]
Length = 216
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+V +T +KL + L +KW+K NL + + H+ DSL V H W+D+G
Sbjct: 23 SVDSDTEQKLIDYLQLLVKWNKVYNLTAIRDPQQMVSYHLLDSLAVLP-HLQAGRWLDVG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVFACRIQEAPQM 138
G G PG++ +I V L++S +KK F++ +++ +V R+++
Sbjct: 82 CGAGLPGLVLAICRPDWS---VTLLDSNSKKTGFVQQAIIELGLHNAQVRCARVEDVDAS 138
Query: 139 ITTCDVISARALADLDTLLEYS 160
+IS RA +L L +
Sbjct: 139 QKYSGIIS-RAFTELGDFLRVT 159
>gi|15642767|ref|NP_232400.1| 16S rRNA methyltransferase GidB [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|153820110|ref|ZP_01972777.1| hypothetical protein A5C_0004 [Vibrio cholerae NCTC 8457]
gi|153821960|ref|ZP_01974627.1| hypothetical protein A5E_0009 [Vibrio cholerae B33]
gi|227082886|ref|YP_002811437.1| glucose inhibited division protein B [Vibrio cholerae M66-2]
gi|229508287|ref|ZP_04397791.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae BX
330286]
gi|229508639|ref|ZP_04398134.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
B33]
gi|229517145|ref|ZP_04406591.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC9]
gi|229606561|ref|YP_002877209.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MJ-1236]
gi|254851565|ref|ZP_05240915.1| glucose-inhibited division protein B [Vibrio cholerae MO10]
gi|255746816|ref|ZP_05420762.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholera
CIRS 101]
gi|262155896|ref|ZP_06029018.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
INDRE 91/1]
gi|298501186|ref|ZP_07010985.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MAK 757]
gi|20177906|sp|Q9KNG5|RSMG_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766911|sp|C3LSJ9|RSMG_VIBCM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|9657376|gb|AAF95913.1| glucose inhibited division protein B [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|126509341|gb|EAZ71935.1| hypothetical protein A5C_0004 [Vibrio cholerae NCTC 8457]
gi|126520499|gb|EAZ77722.1| hypothetical protein A5E_0009 [Vibrio cholerae B33]
gi|227010774|gb|ACP06986.1| glucose inhibited division protein B [Vibrio cholerae M66-2]
gi|229346208|gb|EEO11180.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC9]
gi|229354353|gb|EEO19281.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
B33]
gi|229354560|gb|EEO19482.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae BX
330286]
gi|229369216|gb|ACQ59639.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
MJ-1236]
gi|254847270|gb|EET25684.1| glucose-inhibited division protein B [Vibrio cholerae MO10]
gi|255735573|gb|EET90972.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholera
CIRS 101]
gi|262030348|gb|EEY48990.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
INDRE 91/1]
gi|297540058|gb|EFH76120.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MAK 757]
Length = 210
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+GSG G PGI +I E LI+S K+ FL+ V+
Sbjct: 75 VGSGPGLPGIPLAIMHPDKE---FVLIDSLGKRIRFLKQVIH 113
>gi|330812745|ref|YP_004357207.1| glucose inhibited division protein B methyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327380853|gb|AEA72203.1| putative glucose inhibited division protein B methyltransferase
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 211
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L +KW+K NL + ++ RH+ DSL V W+D+GSGGG PGI
Sbjct: 28 QLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSF-VENGRWLDVGSGGGMPGI 86
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+I + V ++S KK FL V
Sbjct: 87 PLAILFPDSQ---VTCLDSNGKKTRFLTQV 113
>gi|302559672|ref|ZP_07312014.1| methyltransferase GidB [Streptomyces griseoflavus Tu4000]
gi|302477290|gb|EFL40383.1| methyltransferase GidB [Streptomyces griseoflavus Tu4000]
Length = 238
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 28 YAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E +T V+
Sbjct: 88 VREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVMGKLTPVHVV 139
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLATWGIPLL 158
>gi|74318825|ref|YP_316565.1| 16S rRNA methyltransferase GidB [Thiobacillus denitrificans ATCC
25259]
gi|123772845|sp|Q3SF56|RSMG_THIDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|74058320|gb|AAZ98760.1| glucose inhibited division protein [Thiobacillus denitrificans ATCC
25259]
Length = 208
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ +KL + L KW++ NL + H+ DSL H +D+GSGGG
Sbjct: 21 DATQKLLAYLALLDKWNRVYNLTAVRDAGRMVSHHLLDSLAAVP-HFRGETVLDVGSGGG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQEAPQMI 139
PGI +I ++ V LI+S KK +FL +Q A G V R+++ +
Sbjct: 80 LPGIPLAIARPDLQ---VTLIDSVAKKTAFL---LQAKAELGLANLSVVTGRVEDY-RPA 132
Query: 140 TTCDVISARALADL 153
DV+++RA +DL
Sbjct: 133 ARFDVVTSRAFSDL 146
>gi|145597097|ref|YP_001161394.1| 16S rRNA methyltransferase GidB [Salinispora tropica CNB-440]
gi|189040822|sp|A4XDK0|RSMG_SALTO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145306434|gb|ABP57016.1| methyltransferase GidB [Salinispora tropica CNB-440]
Length = 242
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ + V + P S +D+GSG G PG++ ++ + V L
Sbjct: 43 GLIGPREAPRIWDRHLLNCAAVAERIPLGSTVLDVGSGAGLPGLVLAVARPDLS---VTL 99
Query: 104 IESKNKKASFLRYVVQK--TAARGKVFACRIQEAPQM-----ITTCDVISARALADLDTL 156
+E ++ +FL V + AA +V R +E T DV++ARA+A LD L
Sbjct: 100 VEPLARRTAFLVEAVAQLDLAASVQVVRGRAEEIASGGGGVEPLTGDVVTARAVAPLDRL 159
Query: 157 LEYSFP 162
+ P
Sbjct: 160 ARWCLP 165
>gi|237729051|ref|ZP_04559532.1| glucose-inhibited division protein B [Citrobacter sp. 30_2]
gi|226909673|gb|EEH95591.1| glucose-inhibited division protein B [Citrobacter sp. 30_2]
Length = 207
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLKGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + A R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELALTNITPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 143 SLNDMVSW 150
>gi|172041700|ref|YP_001801414.1| glucose-inhibited division protein B [Corynebacterium urealyticum
DSM 7109]
gi|171853004|emb|CAQ05980.1| glucose-inhibited division protein B [Corynebacterium urealyticum
DSM 7109]
Length = 271
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ +S + ++ ID+GSG G PGI +I +++ V L
Sbjct: 95 GLIGPREVPRIWDRHIMNSAVLEEIIEDGERVIDVGSGAGLPGIPLAIARPNVK---VQL 151
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYS 160
+E ++ FL VV+ +V R +E + + DV+++RA+A L L ++S
Sbjct: 152 LEPLLRRTKFLEEVVEDLGLDNVEVHRGRAEEKAIVRKLAGADVVTSRAVAPLGRLCQWS 211
Query: 161 FP 162
P
Sbjct: 212 LP 213
>gi|258405442|ref|YP_003198184.1| methyltransferase GidB [Desulfohalobium retbaense DSM 5692]
gi|257797669|gb|ACV68606.1| methyltransferase GidB [Desulfohalobium retbaense DSM 5692]
Length = 219
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVS--------SSTVEDFWIRHVEDSLRVFQLHP 70
Y +S E L + L +W+ +INLV S V D W H+ L+ Q P
Sbjct: 22 YEISEVQAELLAVYLRLLEQWNTRINLVGPRKWPQMLSQLVADSW--HLAALLQELQW-P 78
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +DLG+G G PGI + + G L+E + K+ +FL + + G +
Sbjct: 79 HQCQSLDLGAGAGLPGIPLRLFWTH---GRYTLVEIRQKRVAFLHNALAQMELPGTAIHH 135
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYS 160
R +E P+ + ++ +RA LL +
Sbjct: 136 GRAEELPETLLPAHLVLSRAFMPWHQLLPLA 166
>gi|221069724|ref|ZP_03545829.1| methyltransferase GidB [Comamonas testosteroni KF-1]
gi|220714747|gb|EED70115.1| methyltransferase GidB [Comamonas testosteroni KF-1]
Length = 219
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-------------RVF 66
+++ ++ L F L KW+K NL S ++ H+ DSL RV
Sbjct: 19 DLAPAQIDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPALLRHVSSLRVE 78
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ P +D+GSGGG PG++ +I I+ VN +++ KKA+F +Q+ AA +
Sbjct: 79 EGKRLP--LLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAF----IQQVAASLR 129
Query: 127 VFACR--IQEAPQMITTCDVISARALADL 153
+ R + T VIS RA A L
Sbjct: 130 LPNLRGIHDRVENLKTQYPVISCRAFASL 158
>gi|71278438|ref|YP_271684.1| 16S rRNA methyltransferase GidB [Colwellia psychrerythraea 34H]
gi|82592862|sp|Q47U39|RSMG_COLP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71144178|gb|AAZ24651.1| methyltransferase GidB [Colwellia psychrerythraea 34H]
Length = 209
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS+E ++ L + L KW+K NL S + ++H+ DSL V ++ + +ID+G+
Sbjct: 18 VSQEQIDLLIQYVELLNKWNKAYNLTSVRDPSEMLVKHIMDSLMVGEVLIGKN-FIDVGT 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-QKTAARGKVFACRIQEAPQMI 139
G G PGI +I E V L++S K+ +FLR VV Q + R++E Q
Sbjct: 77 GPGLPGIPLAILYP--ERNFV-LLDSLGKRITFLRQVVFQLKLSNVTPVKARVEEY-QGE 132
Query: 140 TTCDVISARALADLDTLLEY 159
D + +RA + L+ ++ +
Sbjct: 133 EPFDGVLSRAFSSLNDMVSW 152
>gi|289523965|ref|ZP_06440819.1| 16S rRNA methyltransferase GidB [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502621|gb|EFD23785.1| 16S rRNA methyltransferase GidB [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 235
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
++ L + +R+ L ++Y L L + + L + + + H+ D L L P
Sbjct: 13 SDVLEGIIDANRDKL--MDYAKLLGLA-NSRARLTGPADPKCIFDEHIVDCLAALPLIPS 69
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC- 130
+D+G+GGG PG++ ++ S + V+L++S KK L +V+ V C
Sbjct: 70 NIRIVDIGTGGGLPGLVWAVCRSDV---FVDLLDSVRKKCLVLEEMVRNLNLANVVVHCS 126
Query: 131 RIQE-APQMITTCDVISARALADLDTLLEYSFP 162
R +E A D+ +ARA++ L LLEY P
Sbjct: 127 RAEEFASSNKDLYDLAAARAVSHLGVLLEYFSP 159
>gi|332366130|gb|EGJ43886.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1059]
Length = 237
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIGNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDRAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|239930181|ref|ZP_04687134.1| glucose-inhibited division protein B [Streptomyces ghanaensis ATCC
14672]
gi|291438523|ref|ZP_06577913.1| conserved hypothetical GidB-family protein [Streptomyces ghanaensis
ATCC 14672]
gi|291341418|gb|EFE68374.1| conserved hypothetical GidB-family protein [Streptomyces ghanaensis
ATCC 14672]
Length = 239
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 28 YAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T ARG R +E + V+
Sbjct: 88 VREDLK---ITLLEPLLRRTTFLTEVVELLGLDHVTVARG-----RAEEVMGKLPPVHVV 139
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLATWGIPLL 158
>gi|145221427|ref|YP_001132105.1| methyltransferase GidB [Mycobacterium gilvum PYR-GCK]
gi|315446821|ref|YP_004079700.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. Spyr1]
gi|189045862|sp|A4T4S9|RSMG_MYCGI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145213913|gb|ABP43317.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium gilvum PYR-GCK]
gi|315265124|gb|ADU01866.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. Spyr1]
Length = 227
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V+ W RH+ + + +L D+GSG G PGI ++ + V L
Sbjct: 39 GLLGPREVDRIWDRHILNCAVIGELVEAGERVADVGSGAGLPGIPLALARPDVH---VVL 95
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSF 161
IE +++ FLR ++ V R ++ + + DV+ +RA+A LD L ++S
Sbjct: 96 IEPLLRRSDFLREAIEDVGIECSVVRGRAEDRSVREEVGPTDVVVSRAVASLDKLAKWSS 155
Query: 162 PWL 164
P L
Sbjct: 156 PLL 158
>gi|187476516|ref|YP_784540.1| glucose inhibited division protein B [Bordetella avium 197N]
gi|123515348|sp|Q2L2S3|RSMG_BORA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115421102|emb|CAJ47586.1| glucose inhibited division protein B [Bordetella avium 197N]
Length = 224
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYPSIWID 77
E EKL + +W++ NL + E I+H+ DSL V Q P+ D
Sbjct: 28 EQQEKLLRYMAQMQRWNRTYNLTAIRDPEQMLIQHLFDSLSVVQPLVRALQAGQPAKVYD 87
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-A 135
+GSGGG PG++ +I + + +++ KK +F++ + RI+ A
Sbjct: 88 VGSGGGLPGVVLAIVQPEWD---ITCVDAVEKKTAFVQQMAGTLMLPNLHAMHARIERVA 144
Query: 136 PQMITTCDVISARALADL 153
P CDV+ +RA A L
Sbjct: 145 P---ADCDVVISRAFASL 159
>gi|157373140|ref|YP_001481129.1| 16S rRNA methyltransferase GidB [Serratia proteamaculans 568]
gi|166989555|sp|A8GLL1|RSMG_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157324904|gb|ABV44001.1| methyltransferase GidB [Serratia proteamaculans 568]
Length = 206
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + + KW+K NL S + +RH+ DS+ V H +ID+G+G G PG
Sbjct: 22 QQLLGYVGMLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPHLQGKRFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
I +I L++S K+ FLR V + + R++E P VI
Sbjct: 81 IPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLTNVEPVQSRVEEFPAEPPFDGVI 137
Query: 146 SARALADLDTLLEY 159
S RA A L +L +
Sbjct: 138 S-RAFASLQDMLSW 150
>gi|326799925|ref|YP_004317744.1| ribosomal RNA small subunit methyltransferase G [Sphingobacterium
sp. 21]
gi|326550689|gb|ADZ79074.1| Ribosomal RNA small subunit methyltransferase G [Sphingobacterium
sp. 21]
Length = 211
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 22/153 (14%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
+ +E +++L+ Y W+ +IN++S ++ + RHV SL + +L + + +D+
Sbjct: 19 IQKEQIDRLQDLYAF---WNAQINVISRKDIDSLYERHVLHSLAIAKLVSFKAGATILDV 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ----E 134
G+GGGFPGI +I + LV+ I K K VV++ A + IQ
Sbjct: 76 GTGGGFPGIPLAILFPQTQFLLVDSIGKKIK-------VVKEVA--NALGLTNIQTSHSR 126
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
A Q D + +RA+ L +PW+ K
Sbjct: 127 AEQTPGKFDFVISRAVTRLGEF----YPWVRNK 155
>gi|218551274|ref|YP_002385066.1| 16S rRNA methyltransferase GidB [Escherichia fergusonii ATCC 35469]
gi|226725359|sp|B7LK85|RSMG_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218358816|emb|CAQ91473.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
fergusonii ATCC 35469]
Length = 207
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDV 144
L++S K+ FLR V + +R +VF E P D
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLDNITPVQSRVEVFPA---EPP-----FDG 135
Query: 145 ISARALADLDTLLEY 159
+ +RA A LD +L +
Sbjct: 136 VISRAFASLDDMLNW 150
>gi|269468171|gb|EEZ79870.1| methyltransferase GidB [uncultured SUP05 cluster bacterium]
Length = 204
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPG 86
L+Y +F KW+K NL + +E +H+ DSL + PY +D+G+G G PG
Sbjct: 28 LDYLMLIF-KWNKTYNLSAIRDLESGVKKHLLDSLSIL---PYIGNEPLLDVGAGAGLPG 83
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I+ +I + V++++S KK F+++ + + E Q + I+
Sbjct: 84 IVLAIVRPELS---VSVLDSVGKKCRFMQFAKTQLKLDNLTVVNQRVEDFQAMKCFTQIT 140
Query: 147 ARALADLDTLLEYS 160
+RA A++D L+ +
Sbjct: 141 SRAFAEVDKTLKLT 154
>gi|332998036|gb|EGK17641.1| methyltransferase GidB [Shigella flexneri K-272]
gi|333013714|gb|EGK33079.1| methyltransferase GidB [Shigella flexneri K-227]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEYSFPWLYQ 166
L+ ++ W +Q
Sbjct: 143 SLNDMVS----WCHQ 153
>gi|258622944|ref|ZP_05717959.1| Glucose inhibited division protein [Vibrio mimicus VM573]
gi|258584727|gb|EEW09461.1| Glucose inhibited division protein [Vibrio mimicus VM573]
Length = 210
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
T +V+ + E+L + L KW+K NL S + ++H+ DSL V +H +ID
Sbjct: 16 TLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSVHLEGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+G+G G PGI +I + L++S K+ FL+ V+ +
Sbjct: 75 VGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHE 114
>gi|325684926|gb|EGD27070.1| glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 239
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ YN +++ ++ ++ ++ ++ +NL + ++ +++H DS+ L +P
Sbjct: 10 LSKYNFKLSPVQEQQFKTYFKELVRANEHVNLTRITDEDEVYLKHFYDSVTPLLL--WPE 67
Query: 74 IWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
++ D+G+G GFP + I +E V +++S K+ +FL +++K G
Sbjct: 68 VFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEKLGIEGVN 124
Query: 128 F----ACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
A + + P D+++ARA+A + L EY P
Sbjct: 125 LVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLP 163
>gi|262402092|ref|ZP_06078656.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC586]
gi|262351738|gb|EEZ00870.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC586]
Length = 210
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
T +V+ + E+L + L KW+K NL S + ++H+ DSL V +H +ID
Sbjct: 16 TLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSVHLEGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+G+G G PGI +I + L++S K+ FL+ V+ +
Sbjct: 75 VGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHE 114
>gi|256786607|ref|ZP_05525038.1| 16S rRNA methyltransferase GidB [Streptomyces lividans TK24]
Length = 223
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L + K L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 15 LLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRE 74
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISAR 148
++ + L+E ++ +FL VV+ T RG R +E + V++AR
Sbjct: 75 DLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVMGKLPPVHVVTAR 126
Query: 149 ALADLDTLLEYSFPWL 164
A+A LD L + P L
Sbjct: 127 AVAPLDRLATWGIPLL 142
>gi|258626069|ref|ZP_05720920.1| Glucose inhibited division protein [Vibrio mimicus VM603]
gi|262166772|ref|ZP_06034509.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
VM223]
gi|262172751|ref|ZP_06040429.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
MB-451]
gi|258581595|gb|EEW06493.1| Glucose inhibited division protein [Vibrio mimicus VM603]
gi|261893827|gb|EEY39813.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
MB-451]
gi|262026488|gb|EEY45156.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
VM223]
Length = 210
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
T +V+ + E+L + L KW+K NL S + ++H+ DSL V +H +ID
Sbjct: 16 TLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSVHLEGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+G+G G PGI +I + L++S K+ FL+ V+ +
Sbjct: 75 VGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHE 114
>gi|193211880|ref|YP_001997833.1| 16S rRNA methyltransferase GidB [Chlorobaculum parvum NCIB 8327]
gi|193085357|gb|ACF10633.1| methyltransferase GidB [Chlorobaculum parvum NCIB 8327]
Length = 244
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 2 KYCDSNSILRANYLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
+Y N + L + + E L+ L + L +W+ K+NL+S ++HV
Sbjct: 25 RYVMPNDLQLLERLCREHGIPAEKNALKLLVRYTELLEEWNHKVNLISRKEDAPVIVKHV 84
Query: 60 EDSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
S+ + ++H + +DLG+GGG PGI +I L++S KK + + +
Sbjct: 85 FHSMLISRIHDFKPGEKVLDLGTGGGLPGIPLAILFPETS---FLLVDSTGKKIAACKAM 141
Query: 118 VQKTAARGKVFAC--RIQEAPQMITTCDVISARALADLDTLLEY 159
+ K G V A R++E +I D + +R +A L+ L Y
Sbjct: 142 I-KELGLGNVMAVHSRVEELRGVIF--DTVLSRQVAPLEELCSY 182
>gi|257465889|ref|ZP_05630200.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917045|ref|ZP_07913285.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
gi|313690920|gb|EFS27755.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
Length = 234
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDL 78
++S + +E L + L L++++ NL + + +H+ DSL + + P + ID+
Sbjct: 15 SLSEKQIENLLTYVTLLLEYNQHTNLTAIREEKAVIEKHILDSLLLQEYIPKDATTAIDI 74
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+G GFPG++ +I I L++S KK FL +V + + +V R ++ Q
Sbjct: 75 GTGAGFPGMVLAICNPMIH---FTLMDSVGKKTKFLEWVKEDLNLQNVEVINARAEDYIQ 131
Query: 138 MITT---CDVISARALADLDTLLEYSFPWL 164
+ D+ R ++ L +LEY P+L
Sbjct: 132 ISKRREYYDLGFCRGVSKLAVILEYMIPFL 161
>gi|170694310|ref|ZP_02885464.1| methyltransferase GidB [Burkholderia graminis C4D1M]
gi|170140733|gb|EDT08907.1| methyltransferase GidB [Burkholderia graminis C4D1M]
Length = 232
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---- 71
L ++S L KL + L KW+ NL + I+H+ DSL + P+
Sbjct: 24 LGLLDLSDAQLGKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIV---PHLALR 80
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----K 126
P +D+GSGGG PGI+ +I L G VN I +KK +F Q A G
Sbjct: 81 NPRSVLDVGSGGGLPGIVLAIVLPDC-GVTVNDI--VHKKTAFQ---AQAKAELGLTNLS 134
Query: 127 VFACRI---QEAPQMITTCDVISARALADL 153
V R+ Q ++ DVI +RA A+L
Sbjct: 135 VVTGRVETLQPGAEVPAKFDVIVSRAFAEL 164
>gi|126641595|ref|YP_001084579.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
17978]
Length = 159
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
++H+ DSL + + P + +D+G+GGG PG+I I L E V L++S KK F
Sbjct: 1 MLVKHLLDSLSILKDLPAGRL-LDVGTGGGMPGMI--IALCQPERSCV-LLDSNGKKIRF 56
Query: 114 LRYVVQKTAARGKV-FACRI--QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
L+ + + + R+ Q+ + DVI++RA A L +E + P+L+++
Sbjct: 57 LKQFIADLKLKNVIAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHEQ 113
>gi|91070183|gb|ABE11104.1| putative glucose inhibited division protein B [uncultured
Prochlorococcus marinus clone HF10-11D6]
Length = 246
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WIDLGSGGGFPGIITSIQLSS 95
+ K NL +D+W+ V DS+ F+ P + ++D+GSG GFPG+ +I +
Sbjct: 42 NNKTNLTRLINGDDYWVSQVFDSIWPFKTFPNFNFDNKKFLDIGSGCGFPGLAYAITHPN 101
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--RIQEAPQ---MITTCDVISARAL 150
E + L++S KK L+ +++ + + RI+ M + ++ + RA+
Sbjct: 102 SE---IYLVDSSKKKTDALKALIKAINFKNNIHVINDRIENLAHQSLMRNSFNIATTRAV 158
Query: 151 ADLDTLLEYSFPWLYQK 167
++ T+ EY P L ++
Sbjct: 159 SNPSTVSEYILPMLKKE 175
>gi|300940926|ref|ZP_07155452.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 21-1]
gi|300454356|gb|EFK17849.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 21-1]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|260576111|ref|ZP_05844104.1| glucose inhibited division protein [Rhodobacter sp. SW2]
gi|259021591|gb|EEW24894.1| glucose inhibited division protein [Rhodobacter sp. SW2]
Length = 128
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
LIE+ +KA+FLR Q+ + +V A RI+ P DV+SARALA LD LL Y+
Sbjct: 17 TLIEADQRKATFLRQAAQELNLKVQVLAQRIESTPPQ--AADVVSARALAPLDQLLSYA 73
>gi|170682169|ref|YP_001746070.1| 16S rRNA methyltransferase GidB [Escherichia coli SMS-3-5]
gi|218702590|ref|YP_002410219.1| 16S rRNA methyltransferase GidB [Escherichia coli IAI39]
gi|226725355|sp|B7NR42|RSMG_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725358|sp|B1LL67|RSMG_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170519887|gb|ACB18065.1| methyltransferase GidB [Escherichia coli SMS-3-5]
gi|218372576|emb|CAR20450.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli IAI39]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|320174631|gb|EFW49767.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella dysenteriae CDC 74-1112]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|89074718|ref|ZP_01161176.1| glucose-inhibited division protein B [Photobacterium sp. SKA34]
gi|89049482|gb|EAR55043.1| glucose-inhibited division protein B [Photobacterium sp. SKA34]
Length = 206
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V+ + L++L + L KW+K NL S + ++H+ DS+ V Q S +ID+G
Sbjct: 15 QVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSIVVSQYLDGDS-YIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+G G PGI +I L++S K+ F+R V+ +
Sbjct: 74 TGPGLPGIPLAIMCPDKS---FTLLDSLGKRIRFIRQVIHE 111
>gi|301020856|ref|ZP_07184917.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 69-1]
gi|331675224|ref|ZP_08375977.1| 16S rRNA methyltransferase GidB [Escherichia coli TA280]
gi|331685467|ref|ZP_08386053.1| 16S rRNA methyltransferase GidB [Escherichia coli H299]
gi|300398426|gb|EFJ81964.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 69-1]
gi|331067669|gb|EGI39071.1| 16S rRNA methyltransferase GidB [Escherichia coli TA280]
gi|331077838|gb|EGI49050.1| 16S rRNA methyltransferase GidB [Escherichia coli H299]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|239942677|ref|ZP_04694614.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
gi|239989136|ref|ZP_04709800.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
11379]
Length = 238
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E + Y L K+ L+ V W RH+ + + ++ P D+GSG G PG
Sbjct: 24 EAVRYAELLADAGVKR-GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMIT 140
I ++ ++ + L+E ++ +FL+ VV+ T RG R +E +
Sbjct: 83 IPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRG-----RAEEVLGTLQ 134
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
V++ARA+A LD L + P L
Sbjct: 135 PVQVVTARAVAPLDRLAGWGVPLL 158
>gi|331665394|ref|ZP_08366295.1| 16S rRNA methyltransferase GidB [Escherichia coli TA143]
gi|331057904|gb|EGI29890.1| 16S rRNA methyltransferase GidB [Escherichia coli TA143]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|82779068|ref|YP_405417.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae Sd197]
gi|309784451|ref|ZP_07679090.1| methyltransferase GidB [Shigella dysenteriae 1617]
gi|123561166|sp|Q329S9|RSMG_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81243216|gb|ABB63926.1| GldB [Shigella dysenteriae Sd197]
gi|308927958|gb|EFP73426.1| methyltransferase GidB [Shigella dysenteriae 1617]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|152968447|ref|YP_001364231.1| methyltransferase GidB [Kineococcus radiotolerans SRS30216]
gi|189045856|sp|A6WGM8|RSMG_KINRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151362964|gb|ABS05967.1| methyltransferase GidB [Kineococcus radiotolerans SRS30216]
Length = 254
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++ + L + L+ V W RH+ + + ++ S IDLGSG G PG
Sbjct: 38 DRAATYRELLATAGVERGLIGPREVPRLWDRHLLNCAYLGEVIDQGSSVIDLGSGAGLPG 97
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ-EAPQMITTCDVI 145
I ++ ++ + L+E ++ +FLR + + R +V R + E + + V+
Sbjct: 98 IPLALARPDLQ---IRLVEPLERRYTFLREAITELGLRDQVAVARGRAEDVRGEFSASVV 154
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A L TL ++ P +
Sbjct: 155 TARAVAPLKTLYGWALPLV 173
>gi|332363406|gb|EGJ41191.1| glucose inhibited division protein B [Streptococcus sanguinis SK49]
Length = 237
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ--LHPYPSIWIDLGSGGG 83
++ E ++ L ++W++KINL + + + +++H DS+ V Q + +D+G+G G
Sbjct: 23 DQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIVNQELKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + ++ + + R ++ Q
Sbjct: 83 FPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRAEDFAQDKAFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L E + P+L
Sbjct: 140 AQFDLVTARAVARMQVLSELTIPYL 164
>gi|323965808|gb|EGB61259.1| glucose inhibited division protein [Escherichia coli M863]
gi|327250892|gb|EGE62594.1| methyltransferase GidB [Escherichia coli STEC_7v]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGDRFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 143 SLNDMVSW 150
>gi|242309357|ref|ZP_04808512.1| glucose inhibited division protein [Helicobacter pullorum MIT
98-5489]
gi|239523928|gb|EEQ63794.1| glucose inhibited division protein [Helicobacter pullorum MIT
98-5489]
Length = 161
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP----SIW 75
N+ E +KLE + + L+W+K +L + ++E +++EDSL ++
Sbjct: 2 NLGVEISKKLEDYAIMLLEWNKIHSLSGAKSLEMIQ-KNIEDSLYPLEIESLKLRDKKFL 60
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFA 129
D+GSG GFP I I L G V L E KKA+FL+ V + R KV
Sbjct: 61 FDVGSGNGFPAIPLGIVL----GSKVILCEPNAKKAAFLQNVKVELGLENFCVMRQKVEQ 116
Query: 130 CRIQEAPQMITT 141
+++ P +IT+
Sbjct: 117 ITMEDKPDIITS 128
>gi|116493452|ref|YP_805187.1| cell division SAM-dependent methyltransferase [Pediococcus
pentosaceus ATCC 25745]
gi|122265084|sp|Q03DH7|RSMG_PEDPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103602|gb|ABJ68745.1| 16S rRNA m(7)G-527 methyltransferase [Pediococcus pentosaceus ATCC
25745]
Length = 243
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSI 74
Y +S + + +Y + ++ ++ +NL + + + +++H DS+ P +
Sbjct: 15 YQISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVTPLLEAPEYFKSGAE 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGK 126
D+G+G GFP + I S++ V +++S NK+ +FL+ +V + R +
Sbjct: 75 LCDVGAGAGFPSLPMKILFPSLK---VTIVDSLNKRITFLKTLVDQLELTDVTLVHDRAE 131
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F + + ++++ARA+A L L E P + Q
Sbjct: 132 TFGAKKSVYREKF---EIVTARAVARLSVLSELCIPLVKQ 168
>gi|116514833|ref|YP_813739.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274435|sp|Q047S1|RSMG_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116094148|gb|ABJ59301.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126527|gb|ADY85857.1| Glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 239
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ YN +++ ++ ++ ++ ++ +NL + ++ +++H DS+ L +P
Sbjct: 10 LSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLL--WPE 67
Query: 74 IWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
++ D+G+G GFP + I +E V +++S K+ +FL +++K G
Sbjct: 68 VFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEKLGIEGVN 124
Query: 128 F----ACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
A + + P D+++ARA+A + L EY P
Sbjct: 125 LVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLP 163
>gi|323975192|gb|EGB70296.1| glucose inhibited division protein [Escherichia coli TW10509]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|326314884|ref|YP_004232556.1| ribosomal RNA small subunit methyltransferase G [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323371720|gb|ADX43989.1| Ribosomal RNA small subunit methyltransferase G [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 243
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--- 63
++ LRA ++S L +L F L KW++ NL + ++ H+ DSL
Sbjct: 9 SAPLRAGAETLGLDLSETQLAQLLEFLALLQKWNQVYNLTAVRDPQEMLTHHLLDSLAAV 68
Query: 64 -------RVFQLHPYPSI------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ Q P + +D+GSGGG PG++ +I S++ V+ +++ KK
Sbjct: 69 APLQRHLKAVQGLPGSAGEGARLRLLDVGSGGGLPGVVFAICCPSLD---VSCVDTVAKK 125
Query: 111 ASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A+F++ R + R++ + DV+S RA A L + +S
Sbjct: 126 AAFIQQAAVSLRLRNLRGIHARVE---TLAGPFDVVSCRAFASLPDFVAWS 173
>gi|320539762|ref|ZP_08039423.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Serratia
symbiotica str. Tucson]
gi|320030165|gb|EFW12183.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Serratia
symbiotica str. Tucson]
Length = 206
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + + KW+K NL S + +RH+ DS+ V H S +ID+G+G G PG
Sbjct: 22 QQLLGYIVMLEKWNKAYNLTSVRDAQQMLVRHILDSI-VVNSHLQGSRFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
I +I L++S K+ FLR V + + R++E D +
Sbjct: 81 IPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLHNIEPVHSRVEEF-MAEPPFDGV 136
Query: 146 SARALADLDTLLEY 159
+RA A L +L +
Sbjct: 137 ISRAFASLQDMLSW 150
>gi|313124635|ref|YP_004034894.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281198|gb|ADQ61917.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 239
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ YN +++ ++ ++ ++ ++ +NL + ++ +++H DS+ L +P
Sbjct: 10 LSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLL--WPE 67
Query: 74 IWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
++ D+G+G GFP + I +E V +++S K+ +FL +++K G
Sbjct: 68 VFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEKLGIEGVN 124
Query: 128 F----ACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
A + + P D+++ARA+A + L EY P
Sbjct: 125 LVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLP 163
>gi|281420102|ref|ZP_06251101.1| 16S rRNA methyltransferase GidB [Prevotella copri DSM 18205]
gi|281405902|gb|EFB36582.1| 16S rRNA methyltransferase GidB [Prevotella copri DSM 18205]
Length = 253
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWI-D 77
N++ E ++ E L+ W+ KIN++S +++ + HV SL + + +H P I D
Sbjct: 56 NLTEEQKKQFEALDALYRDWNSKINVISRKDIDNLYEHHVLHSLAIAKAIHFRPGTEILD 115
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVN 102
G GGGFPGI +I + L++
Sbjct: 116 FGCGGGFPGIPLAILFPECKFKLID 140
>gi|296271538|ref|YP_003654170.1| methyltransferase GidB [Thermobispora bispora DSM 43833]
gi|296094325|gb|ADG90277.1| methyltransferase GidB [Thermobispora bispora DSM 43833]
Length = 226
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +++ + L + L+ V W RH+ + V + P + +D+GSG G
Sbjct: 21 EAMDRARVYAELLAGPGVERGLLGPREVPRIWDRHMLNCGVVAEEVPENTTLVDIGSGAG 80
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG++ +I + V L+E ++ FL + + +V R +E
Sbjct: 81 LPGVVLAIIRPDVR---VTLLEPLLRRTVFLSEITEILKLDNVEVLRGRAEEL-AYKRVF 136
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
DV +ARA+A LD L+ +S P L +
Sbjct: 137 DVATARAVAPLDRLVAWSLPLLRE 160
>gi|293391122|ref|ZP_06635456.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951656|gb|EFE01775.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 232
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
L KW+K NL S +D ++H+ DSL V PY +ID+G+G G PG+ +I
Sbjct: 52 LLNKWNKAYNLTSVRDPQDMLVKHILDSLVV---SPYLQGDRFIDVGTGPGLPGLPLAI- 107
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
+ + V L++S K+ SF+R V+K K R++E Q D + +RA A
Sbjct: 108 -INPDKQFV-LLDSLGKRISFIRNAVRKLGLTNVKPVLSRVEEY-QPEEKFDGVLSRAFA 164
Query: 152 DLDTLLEY 159
L + E+
Sbjct: 165 SLKDMAEW 172
>gi|218707386|ref|YP_002414905.1| 16S rRNA methyltransferase GidB [Escherichia coli UMN026]
gi|293407377|ref|ZP_06651299.1| ribosomal RNA small subunit methyltransferase G [Escherichia coli
FVEC1412]
gi|293413190|ref|ZP_06655856.1| 16S rRNA methyltransferase GidB [Escherichia coli B354]
gi|298383119|ref|ZP_06992714.1| glucose inhibited division protein B [Escherichia coli FVEC1302]
gi|300896069|ref|ZP_07114628.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 198-1]
gi|226725357|sp|B7NF56|RSMG_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218434483|emb|CAR15410.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli UMN026]
gi|284923854|emb|CBG36953.1| glucose inhibited division protein [Escherichia coli 042]
gi|291425668|gb|EFE98704.1| ribosomal RNA small subunit methyltransferase G [Escherichia coli
FVEC1412]
gi|291468323|gb|EFF10818.1| 16S rRNA methyltransferase GidB [Escherichia coli B354]
gi|298276955|gb|EFI18473.1| glucose inhibited division protein B [Escherichia coli FVEC1302]
gi|300360055|gb|EFJ75925.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 198-1]
Length = 207
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|327482901|gb|AEA86211.1| 16S rRNA methyltransferase GidB [Pseudomonas stutzeri DSM 4166]
Length = 215
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WIDLGSGGGFPGIITSIQ 92
+KW+K NL + ++ RH+ DSL V P+ + W+D+GSGGG PG+ +I
Sbjct: 39 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVV---PFVAEGGRNWLDVGSGGGMPGVPLAIM 95
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
L++S KK FL V ++ A +V R+++ Q D I++RA +
Sbjct: 96 FPERA---FTLLDSNGKKTRFLTQVKLELKLANLEVVHARVEQF-QPSIAFDGITSRAFS 151
Query: 152 DLDTLLEYS 160
L+ ++
Sbjct: 152 SLEDFASWT 160
>gi|289770499|ref|ZP_06529877.1| GidB [Streptomyces lividans TK24]
gi|289700698|gb|EFD68127.1| GidB [Streptomyces lividans TK24]
Length = 247
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 36 YAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 95
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E + V+
Sbjct: 96 VREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVMGKLPPVHVV 147
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 148 TARAVAPLDRLATWGIPLL 166
>gi|189040871|sp|A4SCT8|RSMG_PROVI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 221
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ E + L + + W+ K+NL+S IRHV SL +H + +DL
Sbjct: 22 ITDEQHQLLVRYAQMLESWNTKVNLISRKEDAPVLIRHVFHSLLPSLVHNFRDGETVLDL 81
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ 137
G+GGG PGI +I ++ L++S KK + ++++ + R++E
Sbjct: 82 GTGGGLPGIPLAIMYPQVQ---FLLVDSTGKKITACSAMIEELGLTNARAMHTRVEELKG 138
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ + I +R +A L L Y+ P L
Sbjct: 139 L--AFNTILSRQVAPLKELSRYAAPLL 163
>gi|148982410|ref|ZP_01816748.1| glucose-inhibited division protein B [Vibrionales bacterium SWAT-3]
gi|145960492|gb|EDK25862.1| glucose-inhibited division protein B [Vibrionales bacterium SWAT-3]
Length = 217
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VS + +L + L KW+K NL S + ++H+ DS+ + H +ID+G
Sbjct: 25 EVSEKQRSQLVGYVELLNKWNKAYNLTSVRDPLEMMVKHILDSI-IVSTHLQGKRFIDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI SI E L++S K+ F++ VV + V R++E Q
Sbjct: 84 TGPGLPGIPLSIMNPDSE---FYLLDSLGKRIRFIKQVVHELGIDNVVPVQSRVEEF-QP 139
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 140 EEKFDAVLSRAFASMTDMVEW 160
>gi|104774705|ref|YP_619685.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123251759|sp|Q1G8A5|RSMG_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|103423786|emb|CAI98794.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 239
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ YN +++ ++ ++ ++ ++ +NL + ++ +++H DS+ L +P
Sbjct: 10 LSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLL--WPE 67
Query: 74 IWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
++ D+G+G GFP + I +E V +++S K+ +FL +++K G
Sbjct: 68 VFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEKLGIEGVN 124
Query: 128 F----ACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
A + + P D+++ARA+A + L EY P
Sbjct: 125 LVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLP 163
>gi|315420679|gb|ADU15872.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ FLR +V ++ R +E+ + D +RA+A LD L+++S
Sbjct: 91 LEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLMKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|283782568|ref|YP_003373322.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis 409-05]
gi|283441362|gb|ADB13828.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis 409-05]
Length = 255
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + LLN V E LEK + F+ + L+ + W RH+ +S V
Sbjct: 39 LEGSPLLN--EVLGEALEKCKLFHVKLQQEGLIRGLIGPRDMNILWERHILNSAAVV--- 93
Query: 70 PYPSIWI---------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P+ I D+GSGGGFPG++ + L + V LIE ++ +LR V
Sbjct: 94 PFIKEAIVGRKNKRVADVGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLRECVAL 150
Query: 121 TAARG-KVFACRIQEA-----PQMITTCDVISARALADLDTLLEYSFPWL 164
+ +F R E I DV++ RA+A + L ++ P L
Sbjct: 151 MKLKNVTIFHGRSDEVIDKVKSHEIPAFDVVTCRAVAPMTKLAGWTIPLL 200
>gi|15804340|ref|NP_290379.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 EDL933]
gi|15833936|ref|NP_312709.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
Sakai]
gi|16131608|ref|NP_418196.1| 16S rRNA m(7)G527 methyltransferase, SAM-dependent;
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. MG1655]
gi|26250486|ref|NP_756526.1| 16S rRNA methyltransferase GidB [Escherichia coli CFT073]
gi|30064955|ref|NP_839126.1| 16S rRNA methyltransferase GidB [Shigella flexneri 2a str. 2457T]
gi|74314234|ref|YP_312653.1| 16S rRNA methyltransferase GidB [Shigella sonnei Ss046]
gi|82546100|ref|YP_410047.1| 16S rRNA methyltransferase GidB [Shigella boydii Sb227]
gi|89110267|ref|AP_004047.1| methyltransferase, glucose-inhibited cell-division protein
[Escherichia coli str. K-12 substr. W3110]
gi|91213267|ref|YP_543253.1| 16S rRNA methyltransferase GidB [Escherichia coli UTI89]
gi|110644081|ref|YP_671811.1| 16S rRNA methyltransferase GidB [Escherichia coli 536]
gi|110807564|ref|YP_691084.1| 16S rRNA methyltransferase GidB [Shigella flexneri 5 str. 8401]
gi|117626011|ref|YP_859334.1| glucose-inhibited division protein B [Escherichia coli APEC O1]
gi|157163222|ref|YP_001460540.1| 16S rRNA methyltransferase GidB [Escherichia coli HS]
gi|168748530|ref|ZP_02773552.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4113]
gi|168753642|ref|ZP_02778649.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4401]
gi|168766240|ref|ZP_02791247.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4486]
gi|168772211|ref|ZP_02797218.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4196]
gi|168779975|ref|ZP_02804982.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4076]
gi|168786583|ref|ZP_02811590.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC869]
gi|170022223|ref|YP_001727177.1| 16S rRNA methyltransferase GidB [Escherichia coli ATCC 8739]
gi|170083241|ref|YP_001732561.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187732172|ref|YP_001882423.1| 16S rRNA methyltransferase GidB [Shigella boydii CDC 3083-94]
gi|188493070|ref|ZP_03000340.1| methyltransferase GidB [Escherichia coli 53638]
gi|191169754|ref|ZP_03031413.1| 16S rRNA methyltransferase GidB [Escherichia coli B7A]
gi|191170432|ref|ZP_03031985.1| 16S rRNA methyltransferase GidB [Escherichia coli F11]
gi|193063828|ref|ZP_03044915.1| 16S rRNA methyltransferase GidB [Escherichia coli E22]
gi|193071606|ref|ZP_03052512.1| 16S rRNA methyltransferase GidB [Escherichia coli E110019]
gi|194428104|ref|ZP_03060648.1| 16S rRNA methyltransferase GidB [Escherichia coli B171]
gi|194435612|ref|ZP_03067715.1| 16S rRNA methyltransferase GidB [Escherichia coli 101-1]
gi|195936367|ref|ZP_03081749.1| glucose-inhibited division protein B [Escherichia coli O157:H7 str.
EC4024]
gi|208808840|ref|ZP_03251177.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4206]
gi|208812418|ref|ZP_03253747.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4045]
gi|208818673|ref|ZP_03258993.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4042]
gi|209399374|ref|YP_002273268.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4115]
gi|209921221|ref|YP_002295305.1| 16S rRNA methyltransferase GidB [Escherichia coli SE11]
gi|215489078|ref|YP_002331509.1| 16S rRNA methyltransferase GidB [Escherichia coli O127:H6 str.
E2348/69]
gi|217324250|ref|ZP_03440334.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14588]
gi|218556311|ref|YP_002389225.1| 16S rRNA methyltransferase GidB [Escherichia coli IAI1]
gi|218560815|ref|YP_002393728.1| 16S rRNA methyltransferase GidB [Escherichia coli S88]
gi|218692028|ref|YP_002400240.1| 16S rRNA methyltransferase GidB [Escherichia coli ED1a]
gi|218697466|ref|YP_002405133.1| 16S rRNA methyltransferase GidB [Escherichia coli 55989]
gi|227883962|ref|ZP_04001767.1| glucose-inhibited division protein B [Escherichia coli 83972]
gi|237703541|ref|ZP_04534022.1| ribosomal RNA small subunit methyltransferase G [Escherichia sp.
3_2_53FAA]
gi|238902831|ref|YP_002928627.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli BW2952]
gi|253775625|ref|YP_003038456.1| 16S rRNA methyltransferase GidB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038959|ref|ZP_04873011.1| methyltransferase gidB [Escherichia sp. 1_1_43]
gi|254795746|ref|YP_003080583.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14359]
gi|256021238|ref|ZP_05435103.1| 16S rRNA methyltransferase GidB [Shigella sp. D9]
gi|256025529|ref|ZP_05439394.1| 16S rRNA methyltransferase GidB [Escherichia sp. 4_1_40B]
gi|260846475|ref|YP_003224253.1| methyltransferase GidB [Escherichia coli O103:H2 str. 12009]
gi|260857845|ref|YP_003231736.1| methyltransferase GidB [Escherichia coli O26:H11 str. 11368]
gi|260870474|ref|YP_003236876.1| methyltransferase GidB [Escherichia coli O111:H- str. 11128]
gi|261225897|ref|ZP_05940178.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli O157:H7 str. FRIK2000]
gi|261258942|ref|ZP_05951475.1| methyltransferase GidB [Escherichia coli O157:H7 str. FRIK966]
gi|293417213|ref|ZP_06659840.1| 16S rRNA methyltransferase GidB [Escherichia coli B185]
gi|293464066|ref|ZP_06664480.1| 16S rRNA methyltransferase GidB [Escherichia coli B088]
gi|297519013|ref|ZP_06937399.1| 16S rRNA methyltransferase GidB [Escherichia coli OP50]
gi|300815005|ref|ZP_07095230.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 107-1]
gi|300824550|ref|ZP_07104660.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 119-7]
gi|300902978|ref|ZP_07120921.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 84-1]
gi|300916391|ref|ZP_07133131.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 115-1]
gi|300932375|ref|ZP_07147640.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 187-1]
gi|300950657|ref|ZP_07164551.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 116-1]
gi|300958748|ref|ZP_07170865.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 175-1]
gi|300984346|ref|ZP_07176952.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 45-1]
gi|301019836|ref|ZP_07183977.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 196-1]
gi|301047563|ref|ZP_07194635.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 185-1]
gi|301305611|ref|ZP_07211701.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 124-1]
gi|301644416|ref|ZP_07244415.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 146-1]
gi|306815908|ref|ZP_07450046.1| 16S rRNA methyltransferase GidB [Escherichia coli NC101]
gi|307140440|ref|ZP_07499796.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|307313188|ref|ZP_07592813.1| methyltransferase GidB [Escherichia coli W]
gi|309795703|ref|ZP_07690118.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 145-7]
gi|312967850|ref|ZP_07782062.1| methyltransferase GidB [Escherichia coli 2362-75]
gi|312971968|ref|ZP_07786142.1| methyltransferase GidB [Escherichia coli 1827-70]
gi|331644467|ref|ZP_08345596.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|331649566|ref|ZP_08350652.1| 16S rRNA methyltransferase GidB [Escherichia coli M605]
gi|331655402|ref|ZP_08356401.1| 16S rRNA methyltransferase GidB [Escherichia coli M718]
gi|331660084|ref|ZP_08361022.1| 16S rRNA methyltransferase GidB [Escherichia coli TA206]
gi|331670591|ref|ZP_08371430.1| 16S rRNA methyltransferase GidB [Escherichia coli TA271]
gi|331679844|ref|ZP_08380514.1| 16S rRNA methyltransferase GidB [Escherichia coli H591]
gi|332282465|ref|ZP_08394878.1| ribosomal RNA small subunit methyltransferase G [Shigella sp. D9]
gi|62288117|sp|P0A6U5|RSMG_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|62288118|sp|P0A6U6|RSMG_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|62288119|sp|P0A6U7|RSMG_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122421809|sp|Q1R4J2|RSMG_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122957079|sp|Q0SYT6|RSMG_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123147503|sp|Q0TAW9|RSMG_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123558240|sp|Q31UN9|RSMG_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123615765|sp|Q3YVP4|RSMG_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224586|sp|A1AHS0|RSMG_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166989744|sp|A8A6K3|RSMG_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039386|sp|B1IWZ8|RSMG_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725354|sp|B7MGG0|RSMG_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725356|sp|B7M596|RSMG_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797824|sp|B5YXE4|RSMG_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797825|sp|B6I3X7|RSMG_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229558760|sp|B1X9W8|RSMG_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691694|sp|B2TUN5|RSMG_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766890|sp|B7UMK5|RSMG_ECO27 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766891|sp|B7L890|RSMG_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766892|sp|B7N2H9|RSMG_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|259495493|sp|C4ZZ18|RSMG_ECOBW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21465733|pdb|1JSX|A Chain A, Crystal Structure Of The Escherichia Coli
Glucose-Inhibited Division Protein B (Gidb)
gi|12518597|gb|AAG58943.1|AE005605_11 glucose-inhibited division; chromosome replication [Escherichia
coli O157:H7 str. EDL933]
gi|26110916|gb|AAN83100.1|AE016769_215 Methyltransferase gidB [Escherichia coli CFT073]
gi|290589|gb|AAA62092.1| glucose inhibited division protein [Escherichia coli]
gi|581247|emb|CAA25774.1| unnamed protein product [Escherichia coli]
gi|1790179|gb|AAC76763.1| 16S rRNA m(7)G527 methyltransferase, SAM-dependent;
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. MG1655]
gi|13364157|dbj|BAB38105.1| glucose-inhibited division protein GidB [Escherichia coli O157:H7
str. Sakai]
gi|30043216|gb|AAP18937.1| glucose-inhibited division protein GidB [Shigella flexneri 2a str.
2457T]
gi|73857711|gb|AAZ90418.1| GldB [Shigella sonnei Ss046]
gi|81247511|gb|ABB68219.1| GidB [Shigella boydii Sb227]
gi|85676298|dbj|BAE77548.1| methyltransferase, glucose-inhibited cell-division protein
[Escherichia coli str. K12 substr. W3110]
gi|91074841|gb|ABE09722.1| putative methyltransferase GidB [Escherichia coli UTI89]
gi|110345673|gb|ABG71910.1| glucose inhibited division protein B [Escherichia coli 536]
gi|110617112|gb|ABF05779.1| glucose-inhibited division [Shigella flexneri 5 str. 8401]
gi|115515135|gb|ABJ03210.1| glucose-inhibited division protein B [Escherichia coli APEC O1]
gi|157068902|gb|ABV08157.1| methyltransferase GidB [Escherichia coli HS]
gi|169757151|gb|ACA79850.1| methyltransferase GidB [Escherichia coli ATCC 8739]
gi|169891076|gb|ACB04783.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187429164|gb|ACD08438.1| methyltransferase GidB [Shigella boydii CDC 3083-94]
gi|187771511|gb|EDU35355.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4196]
gi|188016845|gb|EDU54967.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4113]
gi|188488269|gb|EDU63372.1| methyltransferase GidB [Escherichia coli 53638]
gi|189002346|gb|EDU71332.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4076]
gi|189358956|gb|EDU77375.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4401]
gi|189364706|gb|EDU83125.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4486]
gi|189373248|gb|EDU91664.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC869]
gi|190900205|gb|EDV60095.1| 16S rRNA methyltransferase GidB [Escherichia coli B7A]
gi|190909240|gb|EDV68826.1| 16S rRNA methyltransferase GidB [Escherichia coli F11]
gi|192930543|gb|EDV83150.1| 16S rRNA methyltransferase GidB [Escherichia coli E22]
gi|192955070|gb|EDV85567.1| 16S rRNA methyltransferase GidB [Escherichia coli E110019]
gi|194413862|gb|EDX30140.1| 16S rRNA methyltransferase GidB [Escherichia coli B171]
gi|194425155|gb|EDX41139.1| 16S rRNA methyltransferase GidB [Escherichia coli 101-1]
gi|208728641|gb|EDZ78242.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4206]
gi|208733695|gb|EDZ82382.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4045]
gi|208738796|gb|EDZ86478.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4042]
gi|209160774|gb|ACI38207.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4115]
gi|209753808|gb|ACI75211.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753810|gb|ACI75212.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753812|gb|ACI75213.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753814|gb|ACI75214.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753816|gb|ACI75215.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209914480|dbj|BAG79554.1| glucose inhibited division protein B [Escherichia coli SE11]
gi|215267150|emb|CAS11598.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-divisionprotein [Escherichia coli
O127:H6 str. E2348/69]
gi|217320471|gb|EEC28895.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14588]
gi|218354198|emb|CAV00831.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli 55989]
gi|218363080|emb|CAR00718.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli IAI1]
gi|218367584|emb|CAR05368.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli S88]
gi|218429592|emb|CAR10550.2| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli ED1a]
gi|222035453|emb|CAP78198.1| Methyltransferase gidB [Escherichia coli LF82]
gi|226838924|gb|EEH70951.1| methyltransferase gidB [Escherichia sp. 1_1_43]
gi|226902805|gb|EEH89064.1| ribosomal RNA small subunit methyltransferase G [Escherichia sp.
3_2_53FAA]
gi|227839240|gb|EEJ49706.1| glucose-inhibited division protein B [Escherichia coli 83972]
gi|238861773|gb|ACR63771.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli BW2952]
gi|242379278|emb|CAQ34085.1| 16S rRNA m[7]G527 methyltransferase [Escherichia coli BL21(DE3)]
gi|253326669|gb|ACT31271.1| methyltransferase GidB [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253979749|gb|ACT45419.1| glucose-inhibited division protein [Escherichia coli BL21(DE3)]
gi|254595146|gb|ACT74507.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli O157:H7 str. TW14359]
gi|257756494|dbj|BAI27996.1| methyltransferase GidB [Escherichia coli O26:H11 str. 11368]
gi|257761622|dbj|BAI33119.1| methyltransferase GidB [Escherichia coli O103:H2 str. 12009]
gi|257766830|dbj|BAI38325.1| methyltransferase GidB [Escherichia coli O111:H- str. 11128]
gi|260451403|gb|ACX41825.1| methyltransferase GidB [Escherichia coli DH1]
gi|281180798|dbj|BAI57128.1| glucose inhibited division protein B [Escherichia coli SE15]
gi|281603138|gb|ADA76122.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Shigella flexneri 2002017]
gi|291321698|gb|EFE61134.1| 16S rRNA methyltransferase GidB [Escherichia coli B088]
gi|291431244|gb|EFF04237.1| 16S rRNA methyltransferase GidB [Escherichia coli B185]
gi|294493000|gb|ADE91756.1| methyltransferase GidB [Escherichia coli IHE3034]
gi|299882064|gb|EFI90275.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 196-1]
gi|300300549|gb|EFJ56934.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 185-1]
gi|300314629|gb|EFJ64413.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 175-1]
gi|300404973|gb|EFJ88511.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 84-1]
gi|300408382|gb|EFJ91920.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 45-1]
gi|300416295|gb|EFJ99605.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 115-1]
gi|300450027|gb|EFK13647.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 116-1]
gi|300459880|gb|EFK23373.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 187-1]
gi|300522951|gb|EFK44020.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 119-7]
gi|300531897|gb|EFK52959.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 107-1]
gi|300839119|gb|EFK66879.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 124-1]
gi|301077255|gb|EFK92061.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 146-1]
gi|305850304|gb|EFM50761.1| 16S rRNA methyltransferase GidB [Escherichia coli NC101]
gi|306906871|gb|EFN37380.1| methyltransferase GidB [Escherichia coli W]
gi|307555879|gb|ADN48654.1| methyltransferase GidB [Escherichia coli ABU 83972]
gi|307628814|gb|ADN73118.1| 16S rRNA methyltransferase GidB [Escherichia coli UM146]
gi|308120582|gb|EFO57844.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 145-7]
gi|309704188|emb|CBJ03535.1| glucose inhibited division protein [Escherichia coli ETEC H10407]
gi|310334345|gb|EFQ00550.1| methyltransferase GidB [Escherichia coli 1827-70]
gi|312287411|gb|EFR15319.1| methyltransferase GidB [Escherichia coli 2362-75]
gi|312948306|gb|ADR29133.1| 16S rRNA methyltransferase GidB [Escherichia coli O83:H1 str. NRG
857C]
gi|313647644|gb|EFS12092.1| methyltransferase GidB [Shigella flexneri 2a str. 2457T]
gi|315063050|gb|ADT77377.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli W]
gi|315138325|dbj|BAJ45484.1| 16S rRNA methyltransferase GidB [Escherichia coli DH1]
gi|315254567|gb|EFU34535.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 85-1]
gi|315285543|gb|EFU44985.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 110-3]
gi|315292826|gb|EFU52178.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 153-1]
gi|315296884|gb|EFU56173.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 16-3]
gi|315618552|gb|EFU99138.1| methyltransferase GidB [Escherichia coli 3431]
gi|320186277|gb|EFW61013.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella flexneri CDC 796-83]
gi|320191156|gb|EFW65806.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. EC1212]
gi|320193715|gb|EFW68348.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli WV_060327]
gi|320201227|gb|EFW75808.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli EC4100B]
gi|320639468|gb|EFX09083.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
G5101]
gi|320644908|gb|EFX13944.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H- str.
493-89]
gi|320650174|gb|EFX18670.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H- str. H
2687]
gi|320655523|gb|EFX23458.1| 16S rRNA methyltransferase GidB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661146|gb|EFX28582.1| 16S rRNA methyltransferase GidB [Escherichia coli O55:H7 str. USDA
5905]
gi|320666275|gb|EFX33281.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
LSU-61]
gi|323155421|gb|EFZ41604.1| methyltransferase GidB [Escherichia coli EPECa14]
gi|323161008|gb|EFZ46927.1| methyltransferase GidB [Escherichia coli E128010]
gi|323167014|gb|EFZ52753.1| methyltransferase GidB [Shigella sonnei 53G]
gi|323173365|gb|EFZ58994.1| methyltransferase GidB [Escherichia coli LT-68]
gi|323177760|gb|EFZ63344.1| methyltransferase GidB [Escherichia coli 1180]
gi|323189527|gb|EFZ74807.1| methyltransferase GidB [Escherichia coli RN587/1]
gi|323380888|gb|ADX53156.1| methyltransferase GidB [Escherichia coli KO11]
gi|323934909|gb|EGB31287.1| glucose inhibited division protein [Escherichia coli E1520]
gi|323944216|gb|EGB40296.1| glucose inhibited division protein [Escherichia coli H120]
gi|323949983|gb|EGB45867.1| glucose inhibited division protein [Escherichia coli H252]
gi|323954965|gb|EGB50743.1| glucose inhibited division protein [Escherichia coli H263]
gi|323959806|gb|EGB55456.1| glucose inhibited division protein [Escherichia coli H489]
gi|323971219|gb|EGB66465.1| glucose inhibited division protein [Escherichia coli TA007]
gi|324008008|gb|EGB77227.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 57-2]
gi|324018462|gb|EGB87681.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 117-3]
gi|324115904|gb|EGC09830.1| glucose inhibited division protein [Escherichia coli E1167]
gi|326340512|gb|EGD64311.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. 1044]
gi|326341578|gb|EGD65367.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. 1125]
gi|330908053|gb|EGH36572.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli AA86]
gi|331036761|gb|EGI08987.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|331042064|gb|EGI14208.1| 16S rRNA methyltransferase GidB [Escherichia coli M605]
gi|331047417|gb|EGI19495.1| 16S rRNA methyltransferase GidB [Escherichia coli M718]
gi|331053299|gb|EGI25332.1| 16S rRNA methyltransferase GidB [Escherichia coli TA206]
gi|331062653|gb|EGI34573.1| 16S rRNA methyltransferase GidB [Escherichia coli TA271]
gi|331073016|gb|EGI44341.1| 16S rRNA methyltransferase GidB [Escherichia coli H591]
gi|332089410|gb|EGI94514.1| methyltransferase GidB [Shigella boydii 3594-74]
gi|332104817|gb|EGJ08163.1| ribosomal RNA small subunit methyltransferase G [Shigella sp. D9]
gi|332345730|gb|AEE59064.1| methyltransferase GidB [Escherichia coli UMNK88]
gi|332750749|gb|EGJ81157.1| methyltransferase GidB [Shigella flexneri 4343-70]
gi|332750897|gb|EGJ81303.1| methyltransferase GidB [Shigella flexneri K-671]
gi|332751743|gb|EGJ82141.1| methyltransferase GidB [Shigella flexneri 2747-71]
gi|332764003|gb|EGJ94240.1| methyltransferase GidB [Shigella flexneri 2930-71]
gi|332995987|gb|EGK15614.1| methyltransferase GidB [Shigella flexneri VA-6]
gi|332997090|gb|EGK16706.1| methyltransferase GidB [Shigella flexneri K-218]
gi|333013464|gb|EGK32835.1| methyltransferase GidB [Shigella flexneri K-304]
Length = 207
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|323939197|gb|EGB35410.1| glucose inhibited division protein [Escherichia coli E482]
Length = 207
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|320009744|gb|ADW04594.1| methyltransferase GidB [Streptomyces flavogriseus ATCC 33331]
Length = 238
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E + Y L K+ L+ V W RH+ + + ++ P D+GSG G PG
Sbjct: 24 EAVRYAELLADAGVKR-GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMIT 140
I ++ ++ + L+E ++ +FL+ VV+ T RG R +E +
Sbjct: 83 IPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLNHVTVVRG-----RAEEVLGTLQ 134
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
V++ARA+A LD L + P L
Sbjct: 135 PVHVVTARAVAPLDRLAGWGVPLL 158
>gi|227543811|ref|ZP_03973860.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|300908879|ref|ZP_07126342.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri SD2112]
gi|227186188|gb|EEI66259.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|300894286|gb|EFK87644.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri SD2112]
Length = 241
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VF---QLHPYPSIW 75
+S E +++ +Y L ++ ++ +NL + ++ +++H DS+ F +L
Sbjct: 16 TLSAEQMQQFADYYQLLVETNEHVNLTRITEKDEVYLKHFYDSITGAFAEPRLESEELTL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKV 127
D+G+G GFP + I ++ V +++S NK+ +FL +V K R +
Sbjct: 76 CDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEALVAKLGLTDVTLIHDRAET 132
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
F+ + +P D+++ARA+A L L E P
Sbjct: 133 FSAK--NSPYR-EKFDIVTARAVARLSVLSELCLP 164
>gi|163803607|ref|ZP_02197473.1| glucose-inhibited division protein B [Vibrio sp. AND4]
gi|159172601|gb|EDP57459.1| glucose-inhibited division protein B [Vibrio sp. AND4]
Length = 211
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VS + E+L + L KW+K NL S ++ ++H+ DS+ V H +ID+G
Sbjct: 18 QVSEKQREQLVGYVELLDKWNKAYNLTSVRDPQEMLVKHILDSI-VVSTHLPGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G G PGI +I + E L++S K+ F++ VV + R++E Q
Sbjct: 77 TGPGLPGIPLAIM--NPEKSFY-LLDSLGKRIRFIKQVVHTLGLKNVTAIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDGVLSRAFASMTDMVEW 153
>gi|241664776|ref|YP_002983136.1| 16S rRNA methyltransferase GidB [Ralstonia pickettii 12D]
gi|240866803|gb|ACS64464.1| methyltransferase GidB [Ralstonia pickettii 12D]
Length = 222
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A ++ +++L + L KW++ NL + D H+ DSL
Sbjct: 6 TDARSELEAGARALGLSLDEAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 65
Query: 64 ----RVFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
R+ +L P +D+GSGGG PGI +I + +V++++ KK +FL
Sbjct: 66 SAVSRIAELARRAQPDAPRVLDVGSGGGLPGIPLAIAFPDVSVTMVDIVQ---KKTAFL 121
>gi|120608763|ref|YP_968441.1| 16S rRNA methyltransferase GidB [Acidovorax citrulli AAC00-1]
gi|189039370|sp|A1TI79|RSMG_ACIAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120587227|gb|ABM30667.1| 16S rRNA m(7)G-527 methyltransferase [Acidovorax citrulli AAC00-1]
Length = 243
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--- 63
++ LRA ++S L +L F L KW++ NL + ++ H+ DSL
Sbjct: 9 SAPLRAGAEALGLDLSEAHLGQLLEFLALLQKWNQVYNLTAVRDPQEMLTHHLLDSLAAV 68
Query: 64 -------RVFQLHPYPSI------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
R Q P + +D+GSGGG PG++ +I +++ V+ +++ KK
Sbjct: 69 APLQRHLRGMQDLPGSAGDGAKLRLLDVGSGGGLPGVVFAICCPALD---VSCVDTVAKK 125
Query: 111 ASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A+F++ R + R++ + DV+S RA A L + +S
Sbjct: 126 AAFIQQAAVSLRLRNLRGIHARVE---NLAGPFDVVSCRAFASLPDFVAWS 173
>gi|90413744|ref|ZP_01221732.1| glucose-inhibited division protein B [Photobacterium profundum
3TCK]
gi|90325213|gb|EAS41710.1| glucose-inhibited division protein B [Photobacterium profundum
3TCK]
Length = 206
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V+ + +++L + L KW+K NL S + ++H+ DS+ V H +ID+G
Sbjct: 15 QVTEQQVQQLVGYVELLHKWNKAYNLTSVRDPHEMLVKHIMDSI-VVSAHLQGENFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQM 138
+G G PGI +I L++S K+ F++ VV + A R++E Q
Sbjct: 74 TGPGLPGIPLAIMCPEKN---FTLLDSLGKRIRFIKQVVHELNIANVTPVQSRVEEF-QP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A ++ ++ +
Sbjct: 130 EQGFDGVISRAFASMNDMVSW 150
>gi|302535579|ref|ZP_07287921.1| 16S rRNA methyltransferase GidB [Streptomyces sp. C]
gi|302444474|gb|EFL16290.1| 16S rRNA methyltransferase GidB [Streptomyces sp. C]
Length = 245
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E + Y L K+ L+ V W RH+ + + ++ P D+GSG G PG
Sbjct: 31 EAVRYAELLADAGVKR-GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPG 89
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMIT 140
I ++ ++ + L+E ++ +FL+ VV+ T RG R +E +
Sbjct: 90 IPLALVRRDLK---ITLLEPLLRRTTFLQEVVELLGLDHVTVVRG-----RAEEVLGKLQ 141
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
V++ARA+A LD L + P L
Sbjct: 142 PVHVVTARAVAPLDRLAGWGVPLL 165
>gi|300925570|ref|ZP_07141443.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 182-1]
gi|301324959|ref|ZP_07218514.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 78-1]
gi|300418344|gb|EFK01655.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 182-1]
gi|300848130|gb|EFK75890.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 78-1]
Length = 215
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 38 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 94
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 95 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 150
Query: 152 DLDTLL 157
L+ ++
Sbjct: 151 SLNDMV 156
>gi|50123436|ref|YP_052603.1| 16S rRNA methyltransferase GidB [Pectobacterium atrosepticum
SCRI1043]
gi|55976380|sp|Q6CYI7|RSMG_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49613962|emb|CAG77415.1| glucose inhibited division protein B [Pectobacterium atrosepticum
SCRI1043]
Length = 206
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S + +RH+ DS+ V + H + +ID+G+G G PGI +I
Sbjct: 33 KWNKAYNLTSVRDPQQMLVRHIMDSI-VVEPHLHGQRFIDVGTGPGLPGIPLAIVRPESH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ FLR V + R+++ P VIS RA A L +
Sbjct: 92 ---FTLLDSLGKRVRFLRQVQHELQLENITPVQSRVEDFPAEPPFDGVIS-RAFASLQDM 147
Query: 157 LEY 159
+ +
Sbjct: 148 ISW 150
>gi|21222292|ref|NP_628071.1| 16S rRNA methyltransferase GidB [Streptomyces coelicolor A3(2)]
gi|7387701|sp|O54571|RSMG_STRCO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|2898105|gb|AAC03485.1| GidB-like [Streptomyces coelicolor A3(2)]
gi|4808381|emb|CAB42703.1| conserved hypothetical GidB-family protein [Streptomyces coelicolor
A3(2)]
Length = 239
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 28 YAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E + V+
Sbjct: 88 VREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVMGKLPPVHVV 139
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLATWGIPLL 158
>gi|257463657|ref|ZP_05628048.1| glucose inhibited division protein B [Fusobacterium sp. D12]
gi|317061207|ref|ZP_07925692.1| glucose inhibited division protein B [Fusobacterium sp. D12]
gi|313686883|gb|EFS23718.1| glucose inhibited division protein B [Fusobacterium sp. D12]
Length = 234
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 16 LNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L +N+S E +E L + L L++++ NL + + +H+ DSL + + P +
Sbjct: 9 LQKWNISLEEKQIEALLSYVSLLLEYNRHTNLTAIREEKAVLEKHILDSLLLQEFIPKEA 68
Query: 74 -IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I ++ L++S KK FL V + +V R
Sbjct: 69 KTAIDIGTGAGFPGMVLAICNPHLQ---FTLMDSVGKKTKFLEVVKEHLQLENVEVVNAR 125
Query: 132 IQEAPQMITT---CDVISARALADLDTLLEYSFPWL 164
++ Q+ D+ R ++ L +LEY P+L
Sbjct: 126 AEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFL 161
>gi|300983836|ref|ZP_07176778.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 200-1]
gi|300306865|gb|EFJ61385.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 200-1]
Length = 217
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 40 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 96
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 97 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 152
Query: 152 DLDTLL 157
L+ ++
Sbjct: 153 SLNDMV 158
>gi|55981940|ref|YP_145237.1| 16S rRNA methyltransferase GidB [Thermus thermophilus HB8]
gi|62298017|sp|Q9LCY2|RSMG_THET8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|55773353|dbj|BAD71794.1| glucose inhibited division protein B [Thermus thermophilus HB8]
Length = 249
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------IDLG 79
LE Y L + S K+NL + E+ ++H DSL + +L +W +DLG
Sbjct: 33 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRL----PLWQGPLRVLDLG 88
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+G GFPG+ I +E + L+++ KK +F+ ++ +G
Sbjct: 89 TGAGFPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKG 131
>gi|324012754|gb|EGB81973.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 60-1]
Length = 216
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 39 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 95
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 96 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 151
Query: 152 DLDTLL 157
L+ ++
Sbjct: 152 SLNDMV 157
>gi|89889332|ref|ZP_01200843.1| glucose-inhibited methyltransferase division protein, gidB
[Flavobacteria bacterium BBFL7]
gi|89517605|gb|EAS20261.1| glucose-inhibited methyltransferase division protein, gidB
[Flavobacteria bacterium BBFL7]
Length = 213
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---------FQLHP 70
++S +E+ L+ +W+ +IN++S ++ + RHV SL + P
Sbjct: 11 HLSDHQMEQFAQLGDLYAEWNSQINVISRKDIDQLYTRHVLHSLGIACVVRFRESLPNTP 70
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G+GGGFPGI +I +LI++ KK + VV+ A + K
Sbjct: 71 GGARVMDVGTGGGFPGIPLAIMFPKTN---FHLIDAIGKKIKVVDTVVE--ALQLKNVTT 125
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYS 160
+ A ++ D I +RA+ ++ + ++
Sbjct: 126 QHGRAEKVKGKFDFIVSRAVTNMPDFVSWT 155
>gi|254548923|ref|ZP_05139370.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 224
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLRNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|145219090|ref|YP_001129799.1| glucose-inhibited division protein B [Prosthecochloris vibrioformis
DSM 265]
gi|145205254|gb|ABP36297.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium phaeovibrioides
DSM 265]
Length = 248
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ E + L + + W+ K+NL+S IRHV SL +H + +D
Sbjct: 48 QITDEQHQLLVRYAQMLESWNTKVNLISRKEDAPVLIRHVFHSLLPSLVHNFRDGETVLD 107
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAP 136
LG+GGG PGI +I ++ L++S KK + ++++ + R++E
Sbjct: 108 LGTGGGLPGIPLAIMYPQVQ---FLLVDSTGKKITACSAMIEELGLTNARAMHTRVEELK 164
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
+ + I +R +A L L Y+ P L
Sbjct: 165 GL--AFNTILSRQVAPLKELSRYAAPLL 190
>gi|148543343|ref|YP_001270713.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri DSM 20016]
gi|184152753|ref|YP_001841094.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri JCM 1112]
gi|227364417|ref|ZP_03848507.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|325683616|ref|ZP_08163132.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
gi|166989746|sp|A5VHQ2|RSMG_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797827|sp|B2G582|RSMG_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148530377|gb|ABQ82376.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus reuteri DSM
20016]
gi|183224097|dbj|BAG24614.1| glucose-inhibited division protein B [Lactobacillus reuteri JCM
1112]
gi|227070510|gb|EEI08843.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|324977966|gb|EGC14917.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
Length = 241
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IW 75
+S E +++ +Y L ++ ++ +NL + + +++H DS+ P
Sbjct: 16 TLSAEQMQQFADYYQLLVETNEHVNLTRITEKNEVYLKHFYDSITGAFAEPRLESEDLTL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+G+G GFP + I ++ V +++S NK+ +FL +V K G E
Sbjct: 76 CDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEDLVAKLGLTGVTLIHDRAET 132
Query: 136 PQMITTC-----DVISARALADLDTLLEYSFP 162
T+ D+++ARA+A L L E P
Sbjct: 133 FSAKTSPYREKFDIVTARAVARLSVLSELCLP 164
>gi|326383903|ref|ZP_08205587.1| 16S rRNA methyltransferase GidB [Gordonia neofelifaecis NRRL
B-59395]
gi|326197362|gb|EGD54552.1| 16S rRNA methyltransferase GidB [Gordonia neofelifaecis NRRL
B-59395]
Length = 236
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + + ++ L+ + W RH+ + + ++ ID+GSG G PGI
Sbjct: 32 ERYADILVQQGVLRGLIGPRELPQLWTRHLLNCAVLSEVIDDSETVIDIGSGAGLPGIPL 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCD 143
++ +E + LIE ++ +FL VV+ T RG+ + + + D
Sbjct: 92 AVARPDLE---ITLIEPLLRRTTFLDEVVEGLHLGNVTVIRGRAEEKAVL---KQVRPAD 145
Query: 144 VISARALADLDTLLEYSFPWL 164
V+++RA+A L+ L +S P +
Sbjct: 146 VVTSRAVAPLERLARWSAPLI 166
>gi|242556525|pdb|3G88|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group P61
gi|242556526|pdb|3G88|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group P61
gi|242556528|pdb|3G89|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet And Amp In Space Group P61
gi|242556529|pdb|3G89|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet And Amp In Space Group P61
gi|242556532|pdb|3G8A|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556533|pdb|3G8A|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556534|pdb|3G8A|C Chain C, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556535|pdb|3G8A|D Chain D, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556536|pdb|3G8A|E Chain E, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556537|pdb|3G8A|F Chain F, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556539|pdb|3G8B|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group I222
gi|242556540|pdb|3G8B|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group I222
Length = 249
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------IDLG 79
LE Y L + S K+NL + E+ ++H DSL + +L +W +DLG
Sbjct: 33 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRL----PLWQGPLRVLDLG 88
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+G GFPG+ I +E + L+++ KK +F+ ++ +G
Sbjct: 89 TGAGFPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKG 131
>gi|7657948|emb|CAB89206.1| putative glucose inhibited division protein B [Thermus
thermophilus]
Length = 225
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------IDLG 79
LE Y L + S K+NL + E+ ++H DSL + +L +W +DLG
Sbjct: 9 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRL----PLWQGPLRVLDLG 64
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+G GFPG+ I +E + L+++ KK +F+ ++ +G
Sbjct: 65 TGAGFPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKG 107
>gi|194431148|ref|ZP_03063441.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae 1012]
gi|194420603|gb|EDX36679.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae 1012]
gi|320180078|gb|EFW55020.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella boydii ATCC 9905]
gi|332084594|gb|EGI89788.1| methyltransferase GidB [Shigella boydii 5216-82]
gi|332084733|gb|EGI89919.1| methyltransferase GidB [Shigella dysenteriae 155-74]
Length = 207
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQ--KTAARGKVFACRIQEAPQMITTCDVISARAL 150
L++S K+ FLR V K G V R++E P VIS RA
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIGPV-QSRVEEFPSEPPFDGVIS-RAF 141
Query: 151 ADLDTLLEY 159
A L+ ++ +
Sbjct: 142 ASLNDMVSW 150
>gi|302336547|ref|YP_003801754.1| glucose inhibited division protein [Olsenella uli DSM 7084]
gi|301320387|gb|ADK68874.1| glucose inhibited division protein [Olsenella uli DSM 7084]
Length = 253
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + ++DLG+G GFPGI +I ++ GL LI+S KKA + + + G++ A
Sbjct: 79 HENYFVDLGTGAGFPGIPLAI--ATGMSGL--LIDSVGKKAHAVEGFIHTLSLSGQLSAK 134
Query: 131 RIQE---APQMITTCDVISARALADLDTLLEYSFPWL 164
I+ A + D +SARA+A+L L+EY+ P L
Sbjct: 135 GIRAEDLARRKAGAFDYVSARAVAELPVLVEYASPLL 171
>gi|298253036|ref|ZP_06976828.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis 5-1]
gi|297532431|gb|EFH71317.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis 5-1]
Length = 236
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + LLN V E LEK + F+ + L+ + W RH+ +S V
Sbjct: 20 LEGSPLLN--EVLGEALEKCKLFHVKLQQEGLIRGLIGPRDMNILWERHILNSAAVV--- 74
Query: 70 PYPSIWI---------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P+ I D+GSGGGFPG++ + L + V LIE ++ +LR V
Sbjct: 75 PFIKEAIVGRKNKRVADVGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLRECVAL 131
Query: 121 TAARG-KVFACRIQEA-----PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +F R E I DV++ RA+A + L ++ P L +
Sbjct: 132 MKLKNVTIFHGRSDEVIDKVKSHEIPAFDVVTCRAVAPMTKLAGWTIPLLNK 183
>gi|289642459|ref|ZP_06474604.1| methyltransferase GidB [Frankia symbiont of Datisca glomerata]
gi|289507718|gb|EFD28672.1| methyltransferase GidB [Frankia symbiont of Datisca glomerata]
Length = 245
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S V + + +D+GSG G PGI ++ + V L
Sbjct: 37 GLIGPREADRLWERHLLNSAVVAEAIDQAAAVVDVGSGAGLPGIPLALARPDLR---VTL 93
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC-----DVISARALADLDTLLE 158
+E ++ FL+ V + G+V R AP T DV ARALA L+ L
Sbjct: 94 LEPMQRRCLFLQEAVGRLGLEGRVTVLR-GRAPDAAATVETHAFDVCLARALAPLERLGA 152
Query: 159 YSFPWL 164
P +
Sbjct: 153 MLLPMV 158
>gi|328675262|gb|AEB27937.1| Ribosomal RNA small subunit methyltransferase G [Francisella cf.
novicida 3523]
Length = 202
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + ++D ++H+ DSL V + + S +D+G+GGG PG++ +I
Sbjct: 30 LLEKWNKVYNMTAIKKLDDMLVKHLFDSLAVAK-YIKGSSTVDVGTGGGLPGVVLAILYP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLD 154
+ LI+S KK FL+ V K + D I +RA + +D
Sbjct: 89 QHQ---FTLIDSVGKKIMFLKNV--KKSLNLNNINPLNMRIENFDGNFDNIISRAFSSVD 143
Query: 155 TLLE 158
T E
Sbjct: 144 TFYE 147
>gi|312964008|ref|ZP_07778479.1| glucose inhibited division protein B [Pseudomonas fluorescens WH6]
gi|311282043|gb|EFQ60653.1| glucose inhibited division protein B [Pseudomonas fluorescens WH6]
Length = 214
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLS 94
+KW+K NL + ++ RH+ DSL V P+ W+D+GSGGG PGI +I
Sbjct: 40 IKWNKAYNLTAVRNPDEMVSRHLLDSLSVM---PFIENGRWLDVGSGGGMPGIPLAILFP 96
Query: 95 SIEGGLVNLIESKNKKASFLRYV 117
+ V ++S KK FL V
Sbjct: 97 EAQ---VTCLDSNGKKTRFLTQV 116
>gi|300721122|ref|YP_003710390.1| glucose-inhibited division protein [Xenorhabdus nematophila ATCC
19061]
gi|297627607|emb|CBJ88126.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Xenorhabdus nematophila ATCC 19061]
Length = 206
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S+E ++L + + KW+K NL S E +RH+ DS+ V +P+ + +ID+
Sbjct: 16 LSQEQKQQLVAYVEMLNKWNKAYNLTSVRDPEQMLVRHIMDSIVV---NPFLHGTRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-AP 136
G+G G PG+ +I + L++S K+ FLR V + R++E P
Sbjct: 73 GTGPGLPGVPLAI---VRQDSHFTLLDSLGKRVRFLRQVQHELGLTNIDPVQSRVEEFIP 129
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ D + +RA A L +L +
Sbjct: 130 E--PPFDGVISRAFASLQDMLSW 150
>gi|116748593|ref|YP_845280.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
gi|193806435|sp|A0LHE3|RSMG2_SYNFM RecName: Full=Ribosomal RNA small subunit methyltransferase G 2;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 2; Short=16S rRNA m7G
methyltransferase 2
gi|116697657|gb|ABK16845.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
Length = 498
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
++ L +++ ++NL + ++ DSL L PS +DLG+G G PGI I
Sbjct: 42 YHQLLREFNPELNLTRIHNFANMVLKLYVDSLLPMNLVELPSPLMDLGTGPGMPGIPIKI 101
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ +E + L ES+ K+A+FL+ V++
Sbjct: 102 AMPELE---IVLAESRQKRAAFLKMAVER 127
>gi|311281695|ref|YP_003943926.1| methyltransferase GidB [Enterobacter cloacae SCF1]
gi|308750890|gb|ADO50642.1| methyltransferase GidB [Enterobacter cloacae SCF1]
Length = 207
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S + IRH+ DS+ V H +ID+G+G G PGI S+
Sbjct: 33 KWNKAYNLTSVRDPNEMLIRHILDSI-VVAPHLQGERFIDVGTGPGLPGIPLSVVRPEAH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ FLR V + R+++ P VIS RA A L+ +
Sbjct: 92 ---FTLLDSLGKRVRFLRQVQHELKLENVTPVQSRVEDFPAQPPFDGVIS-RAFASLNDM 147
Query: 157 LEY 159
+ +
Sbjct: 148 VSW 150
>gi|212712653|ref|ZP_03320781.1| hypothetical protein PROVALCAL_03748 [Providencia alcalifaciens DSM
30120]
gi|212684869|gb|EEB44397.1| hypothetical protein PROVALCAL_03748 [Providencia alcalifaciens DSM
30120]
Length = 207
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S E +RH+ DS+ V H + +ID+G+G G PG
Sbjct: 24 QQLVDYVGLLHKWNKAYNLTSVREPEQMLVRHIMDSI-VVNGHLKGNKFIDVGTGPGLPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
+ +I L++S K+ FL+ V + + R++E P VI
Sbjct: 83 VPLAIVRPDAH---FVLLDSLGKRVRFLKQVQHELGLTNIEPVQFRVEEYPANEGFDGVI 139
Query: 146 SARALADLDTLL 157
S RA A L+ +L
Sbjct: 140 S-RAFASLNDML 150
>gi|6539746|gb|AAF16006.1|AF187159_6 GidB [Streptomyces coelicolor A3(2)]
Length = 257
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 46 YAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 105
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E + V+
Sbjct: 106 VREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVMGKLPPVHVV 157
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 158 TARAVAPLDRLATWGIPLL 176
>gi|212637843|ref|YP_002314368.1| 16S rRNA methyltransferase GidB [Shewanella piezotolerans WP3]
gi|226725363|sp|B8CVV5|RSMG_SHEPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|212559327|gb|ACJ31781.1| Glucose inhibited division protein [Shewanella piezotolerans WP3]
Length = 207
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ S + ++L F + KW+K NL S E IRH+ DSL V H S +ID+G
Sbjct: 16 DASEQQKKQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDSL-VVSPHLKGSRFIDVG 74
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G G PGI +I E L++S K+ F + V + R+ EA Q
Sbjct: 75 TGPGLPGIPLAILNPDKE---FVLLDSLGKRIRFQKQVQFELGINNISSIESRV-EAYQP 130
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + +L++
Sbjct: 131 EELFDGVLSRAFASIQDMLQW 151
>gi|182437487|ref|YP_001825206.1| 16S rRNA methyltransferase GidB [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326778142|ref|ZP_08237407.1| Ribosomal RNA small subunit methyltransferase G [Streptomyces cf.
griseus XylebKG-1]
gi|178466003|dbj|BAG20523.1| putative glucose-inhibited division protein B [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326658475|gb|EGE43321.1| Ribosomal RNA small subunit methyltransferase G [Streptomyces cf.
griseus XylebKG-1]
Length = 246
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E + Y L K+ L+ V W RH+ + + ++ P D+GSG G PG
Sbjct: 32 EAVRYAELLADAGVKR-GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPG 90
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMIT 140
I ++ ++ + L+E ++ +FL+ VV+ T RG R +E +
Sbjct: 91 IPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRG-----RAEEVLGKLQ 142
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
V++ARA+A LD L + P L
Sbjct: 143 PVHVVTARAVAPLDRLAGWGVPLL 166
>gi|54310652|ref|YP_131672.1| 16S rRNA methyltransferase GidB [Photobacterium profundum SS9]
gi|55976423|sp|Q6LLF8|RSMG_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46915095|emb|CAG21870.1| Putative glucose inhibited division protein B [Photobacterium
profundum SS9]
Length = 206
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V+ + +++L + L KW+K NL S + ++H+ DS+ V H +ID+G
Sbjct: 15 QVTEQQVQQLVGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-VVSAHLQGENFIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQM 138
+G G PGI +I L++S K+ F++ VV + A R++E Q
Sbjct: 74 TGPGLPGIPLAIMCPEKN---FTLLDSLGKRIRFIKQVVHELKIANVTPVQSRVEEF-QP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A ++ ++ +
Sbjct: 130 EQGFDGVISRAFASMNDMVSW 150
>gi|329938644|ref|ZP_08288040.1| glucose inhibited division protein [Streptomyces griseoaurantiacus
M045]
gi|329302135|gb|EGG46027.1| glucose inhibited division protein [Streptomyces griseoaurantiacus
M045]
Length = 213
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ ++ + L
Sbjct: 15 GLIGPREVPRLWERHLLNCAVLSEVVPQSVTVCDVGSGAGLPGIPLALVREDLK---ITL 71
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL VV+ T RG R +E + V++ARA+A LD L
Sbjct: 72 LEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVMGQLPPVHVVTARAVAPLDRLA 126
Query: 158 EYSFPWL 164
+ P L
Sbjct: 127 TWGIPLL 133
>gi|308051497|ref|YP_003915063.1| 16S rRNA m(7)G-527 methyltransferase [Ferrimonas balearica DSM
9799]
gi|307633687|gb|ADN77989.1| 16S rRNA m(7)G-527 methyltransferase [Ferrimonas balearica DSM
9799]
Length = 207
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R + L+N VS E +L + KW+K NL S D +H+ DS+ V
Sbjct: 5 RLSTLINDSGLTVSAEQQAQLVELVRMLDKWNKAYNLTSVRDPMDMLEKHILDSI-VVGP 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H +ID+G+G G PG+ +I E L++S K+ F+R V+
Sbjct: 64 HLQGRRFIDVGTGPGLPGLPLAICNPDKE---FVLLDSLGKRIRFIRQVIHSLGLTNVTA 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEY 159
EA Q DV+ +RA A L+ +L +
Sbjct: 121 VESRVEAYQPDPGFDVVLSRAFASLEDMLTW 151
>gi|262204657|ref|YP_003275865.1| methyltransferase GidB [Gordonia bronchialis DSM 43247]
gi|262088004|gb|ACY23972.1| methyltransferase GidB [Gordonia bronchialis DSM 43247]
Length = 205
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ + + L+ V W RH+ + + ++ +D+GSG G PG+
Sbjct: 3 EVYHRILATDGIEHGLLGPREVPRLWDRHILNCAVIGEVIDDGESVVDIGSGAGLPGVAL 62
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCD 143
+I ++ V L+E ++++FL V + T RG+ I+ A + CD
Sbjct: 63 AIARPDLD---VVLLEPLLRRSAFLERAVAELGLSSVTVVRGRAEEKSIRTA---VGQCD 116
Query: 144 VISARALADLDTLLEYSFPWL 164
V ++RA+A L L +S P +
Sbjct: 117 VATSRAVAPLQRLCTWSAPLI 137
>gi|259501221|ref|ZP_05744123.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|302191029|ref|ZP_07267283.1| 16S rRNA methyltransferase GidB [Lactobacillus iners AB-1]
gi|325911351|ref|ZP_08173764.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
gi|259167348|gb|EEW51843.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|325476911|gb|EGC80064.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
Length = 239
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWIDLGSGG 82
E+ +Y + ++K NL + ++ +++H DSL + ++ D+G+G
Sbjct: 23 EQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLTPIIKFREMISNAESLCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT- 140
GFP + I I+ + +I+S K+ +FL +V++ + R ++A + I
Sbjct: 83 GFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKL 139
Query: 141 --TCDVISARALADLDTLLEYSFPWL 164
DV++ARA+A + L EY P +
Sbjct: 140 RENFDVVTARAVARMSVLSEYCLPLV 165
>gi|127514780|ref|YP_001095977.1| glucose-inhibited division protein B [Shewanella loihica PV-4]
gi|126640075|gb|ABO25718.1| methyltransferase GidB [Shewanella loihica PV-4]
Length = 234
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L F + KW+K NL S E IRH+ DSL H +ID+G+G G PG
Sbjct: 50 QQLLDFVAMLAKWNKAYNLTSVRDPEQMLIRHIMDSLAA-SPHLVGERFIDVGTGPGLPG 108
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ-EAPQMITTCDVI 145
I +I E L++S K+ F + VQ A G + + + EA Q D +
Sbjct: 109 IPLAIMNPDKE---FVLLDSLGKRIRFQKQ-VQFELAIGNISSVESRVEAYQPEEKFDGV 164
Query: 146 SARALADLDTLLEY 159
+RA A + +L++
Sbjct: 165 LSRAFASIQDMLQW 178
>gi|147673868|ref|YP_001218411.1| 16S rRNA methyltransferase GidB [Vibrio cholerae O395]
gi|262167090|ref|ZP_06034805.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC27]
gi|172047494|sp|A5F469|RSMG_VIBC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146315751|gb|ABQ20290.1| hypothetical protein VC0395_A2518 [Vibrio cholerae O395]
gi|227011998|gb|ACP08208.1| glucose inhibited division protein B [Vibrio cholerae O395]
gi|262024476|gb|EEY43162.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC27]
Length = 210
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+GSG G PGI +I E L++S K+ FL+ V+
Sbjct: 75 VGSGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIH 113
>gi|330831715|ref|YP_004394667.1| ribosomal RNA small subunit methyltransferase G [Aeromonas veronii
B565]
gi|328806851|gb|AEB52050.1| Ribosomal RNA small subunit methyltransferase G [Aeromonas veronii
B565]
Length = 211
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N + R N LL + +K + L KW+K NL S + ++H+ DSL
Sbjct: 2 ENMLERLNGLLMQAGIVITDTQKSQLVQLVELLHKWNKAYNLTSVRDPDAMLVKHILDSL 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V H + +ID+G+G G PG+ +I + L++S K+ +F+R V+Q+
Sbjct: 62 -VVSPHLHGERFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVIQELGL 117
Query: 124 RGKV-FACRIQEAPQMITTCDVISARALADLDTLLEY 159
R++E Q D + +RA A L+ +L +
Sbjct: 118 TNVTPVKSRVEEY-QPEVGFDGVLSRAFASLEDMLSW 153
>gi|157414076|ref|YP_001484942.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9215]
gi|166989554|sp|A8G6X5|RSMG_PROM2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157388651|gb|ABV51356.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9215]
Length = 237
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 25 TLEKLEYFYFLFLK---WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WID 77
T E++ F L +K + K NL + +D+W+ V DS+ F+ + ++D
Sbjct: 15 TEEEINLFQELQIKIKELNNKTNLTRLTDGDDYWVSQVFDSIWPFKAFTNINFDNKKFLD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-----RI 132
+GSG GFPG+ +I + E + LI+S KK ++++V++ + + +
Sbjct: 75 IGSGCGFPGLAYAITHPNSE---IYLIDSLKKKTDAIKFLVKQINFKNNIHVINDRVENL 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
M ++ + RA+++ T+ EY P L ++
Sbjct: 132 AHQSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|315653263|ref|ZP_07906186.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
gi|315489426|gb|EFU79065.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
Length = 224
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWIDLGSGG 82
E+ +Y + ++K NL + ++ +++H DSL + ++ D+G+G
Sbjct: 23 EQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLTPIIKFREMISNAESLCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT- 140
GFP + I I+ + +I+S K+ +FL +V++ + R ++A + I
Sbjct: 83 GFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKL 139
Query: 141 --TCDVISARALADLDTLLEYSFPWL 164
DV++ARA+A + L EY P +
Sbjct: 140 RENFDVVTARAVARMSVLSEYCLPLV 165
>gi|111020645|ref|YP_703617.1| glucose-inhibited division protein B [Rhodococcus jostii RHA1]
gi|110820175|gb|ABG95459.1| methyltransferase protein GidB (glucose inhibited division protein
B) [Rhodococcus jostii RHA1]
Length = 205
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + E +Y + L+ V W RH+ + V +L +D+GSG G
Sbjct: 4 ERFDIAERYYKSLASDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAG 63
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI +I + + L+E +++ +L V+ V R +E+ +
Sbjct: 64 LPGIPLAIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGG 120
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L+ L ++S P +++
Sbjct: 121 ADVVTSRAVAPLEKLAKWSLPLIHE 145
>gi|290473124|ref|YP_003465985.1| glucose-inhibited division protein [Xenorhabdus bovienii SS-2004]
gi|289172418|emb|CBJ79185.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Xenorhabdus bovienii SS-2004]
Length = 206
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S E ++L + + KW+K NL S E +RH+ DS+ V +P+ + +ID+
Sbjct: 16 LSLEQKQQLIAYVDMLNKWNKAYNLTSVRDPEQMLVRHIMDSIVV---NPFLHGTRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-AP 136
G+G G PGI +I L++S K+ FLR V + + R++E P
Sbjct: 73 GTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLKNIDPVQSRVEEFIP 129
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ D + +RA A L +L +
Sbjct: 130 E--PPFDGVISRAFASLQDMLSW 150
>gi|309803370|ref|ZP_07697465.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|309809024|ref|ZP_07702898.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|312871035|ref|ZP_07731137.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|312872104|ref|ZP_07732179.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|312873445|ref|ZP_07733495.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|312875319|ref|ZP_07735327.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|325913550|ref|ZP_08175915.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|329920815|ref|ZP_08277402.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
gi|308164534|gb|EFO66786.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|308170680|gb|EFO72699.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|311089153|gb|EFQ47589.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|311090954|gb|EFQ49348.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|311092397|gb|EFQ50766.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|311093363|gb|EFQ51705.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|325477129|gb|EGC80276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|328935595|gb|EGG32062.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
Length = 239
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWIDLGSGG 82
E+ +Y + ++K NL + ++ +++H DSL + ++ D+G+G
Sbjct: 23 EQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLTPIIKFREMISNAESLCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT- 140
GFP + I I+ + +I+S K+ +FL +V++ + R ++A + I
Sbjct: 83 GFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKL 139
Query: 141 --TCDVISARALADLDTLLEYSFPWL 164
DV++ARA+A + L EY P +
Sbjct: 140 RENFDVVTARAVARMSVLSEYCLPLV 165
>gi|189040870|sp|Q0SAH7|RSMG_RHOSR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 227
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + E +Y + L+ V W RH+ + V +L +D+GSG G
Sbjct: 26 ERFDIAERYYKSLASDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAG 85
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI +I + + L+E +++ +L V+ V R +E+ +
Sbjct: 86 LPGIPLAIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGG 142
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L+ L ++S P +++
Sbjct: 143 ADVVTSRAVAPLEKLAKWSLPLIHE 167
>gi|189040863|sp|A3QJS0|RSMG_SHELP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 207
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L F + KW+K NL S E IRH+ DSL H +ID+G+G G PG
Sbjct: 23 QQLLDFVAMLAKWNKAYNLTSVRDPEQMLIRHIMDSLAA-SPHLVGERFIDVGTGPGLPG 81
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ-EAPQMITTCDVI 145
I +I E L++S K+ F + VQ A G + + + EA Q D +
Sbjct: 82 IPLAIMNPDKE---FVLLDSLGKRIRFQKQ-VQFELAIGNISSVESRVEAYQPEEKFDGV 137
Query: 146 SARALADLDTLLEY 159
+RA A + +L++
Sbjct: 138 LSRAFASIQDMLQW 151
>gi|220909373|ref|YP_002484684.1| methyltransferase GidB [Cyanothece sp. PCC 7425]
gi|219865984|gb|ACL46323.1| methyltransferase GidB [Cyanothece sp. PCC 7425]
Length = 231
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIW--IDLGSGGG 83
Y L L ++++NL + +FW +H+ DSL P S W ID+G+G G
Sbjct: 35 LYELILTGNQQLNLTRITAPLEFWEKHLWDSLSGIAPFLSPAQTDTSSHWQAIDIGTGAG 94
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR------GKVFACRIQEAPQ 137
FPG++ +I + + LI+S KK S+L V + G+ A + + P
Sbjct: 95 FPGLVVAIVRPDWQ---LTLIDSTRKKISWLESTVAELGLSNVRPIWGR--AEELNQHPG 149
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D+ RA+A D YS P+L
Sbjct: 150 YHQGFDLGLIRAVASADRCAAYSLPFL 176
>gi|126697003|ref|YP_001091889.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9301]
gi|166224601|sp|A3PEW3|RSMG_PROM0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126544046|gb|ABO18288.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9301]
Length = 237
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 25 TLEKLEYFYFLFLK---WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WID 77
T E++ F L +K + K N+ + +D+W+ V DS+ F+ + ++D
Sbjct: 15 TEEEINMFQELQIKIKELNNKTNITRLTDGDDYWVSQVFDSIWPFKAFTNINFDNKKFLD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--RIQEA 135
+GSG GFPG+ +I + E + LI+S KK ++ +V+K + + RI+
Sbjct: 75 IGSGCGFPGLAYAITHPNSE---IYLIDSLKKKTDAIKILVEKINFKNNIHVINDRIENL 131
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
M ++ + RA+++ T+ EY P L ++
Sbjct: 132 AHHSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|332296663|ref|YP_004438586.1| Ribosomal RNA small subunit methyltransferase G [Thermodesulfobium
narugense DSM 14796]
gi|332179766|gb|AEE15455.1| Ribosomal RNA small subunit methyltransferase G [Thermodesulfobium
narugense DSM 14796]
Length = 207
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWIDLGSGGGFPGIITSI 91
LFL ++K+ +LVS ++VE+F+ +HV DSL L P ++D+G+G G PG+I SI
Sbjct: 38 LFL-YNKRHSLVSFNSVEEFFFKHVYDSLFPTVLCPDFFSTKEFLDIGTGAGIPGLILSI 96
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQMITT 141
L L+E K K+ FL V+ + + VF R++ E P+ + +
Sbjct: 97 CFPE---SLWILLEPKYKRVIFLEGVILELDIKNAIVFQERLENLKEIPERVIS 147
>gi|209515786|ref|ZP_03264649.1| methyltransferase GidB [Burkholderia sp. H160]
gi|209503813|gb|EEA03806.1| methyltransferase GidB [Burkholderia sp. H160]
Length = 227
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSI 74
++S E KL + L KW+ NL + I+H+ DSL + P+ PS
Sbjct: 27 DLSDEQQRKLLDYVALLAKWNNVYNLTAIRDPRQMLIQHILDSLSIV---PHLALRGPSA 83
Query: 75 WIDLGSGGGFPGIITSIQL 93
+D+GSGGG PGI+ +I L
Sbjct: 84 ALDVGSGGGLPGIVLAIVL 102
>gi|300934356|ref|ZP_07149612.1| 16S rRNA methyltransferase GidB [Corynebacterium resistens DSM
45100]
Length = 219
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV +S + + P +D+GSG G PGI +I + V L
Sbjct: 44 GLIGPREVPRIWERHVLNSAALEEAIPRDVRVVDVGSGAGLPGIPLAIARPDLN---VQL 100
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI---TTCDVISARALADLDTLLEYS 160
+E ++ +L +V++ V R ++ P ++ DV+++RA+A L L +S
Sbjct: 101 LEPLLRRTVYLDEIVRELGLNCSVHRGRAED-PNVVKELGGADVVTSRAVAPLGKLTTWS 159
Query: 161 FPWL 164
P +
Sbjct: 160 LPLV 163
>gi|39938753|ref|NP_950519.1| 16S rRNA methyltransferase GidB [Onion yellows phytoplasma OY-M]
gi|55976448|sp|Q6YQV6|RSMG_ONYPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39721862|dbj|BAD04352.1| S-adenosylmethionine-dependent [Onion yellows phytoplasma OY-M]
Length = 212
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L + + ++ + L K ++Y + ++K+NL S ++ D +H DSL + ++ + ++
Sbjct: 7 LKDKFALNEKQLNKFVFYYEFLKQENQKMNLTSIISLSDVCYKHFYDSLILKEIFNFNTV 66
Query: 75 --WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+ SG GFP I ++ + +IES KK +FL+ + F +
Sbjct: 67 TNLCDVDSGAGFPSFPLKILFPHLK---IVIIESSLKKINFLKQLSSHLELDNICFFHQR 123
Query: 133 QEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQK 167
E + + D + ARALA L+ +L++ P + +K
Sbjct: 124 VEQYDIAKNGSYDCVVARALARLELILKWCVPLVKKK 160
>gi|254230610|ref|ZP_04923969.1| methyltransferase GidB [Vibrio sp. Ex25]
gi|262392794|ref|YP_003284648.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. Ex25]
gi|151936870|gb|EDN55769.1| methyltransferase GidB [Vibrio sp. Ex25]
gi|262336388|gb|ACY50183.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. Ex25]
Length = 211
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VS + E+L + L KW+K NL S D ++H+ DS+ V H +ID+G
Sbjct: 18 EVSEQQREQLVGYVELLDKWNKAYNLTSVRDPLDMLVKHILDSI-VVSTHLPGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I L++S K+ F++ VV + R++E Q
Sbjct: 77 TGPGLPGIPLAIMNPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTPIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDGVLSRAFASMTDMVEW 153
>gi|269140866|ref|YP_003297567.1| glucose-inhibited cell division protein B
(S-adenosylmethionine-dependent methyltransferase)
[Edwardsiella tarda EIB202]
gi|267986527|gb|ACY86356.1| glucose-inhibited cell division protein B
(S-adenosylmethionine-dependent methyltransferase)
[Edwardsiella tarda EIB202]
gi|304560624|gb|ADM43288.1| Ribosomal RNA small subunit methyltransferase G [Edwardsiella tarda
FL6-60]
Length = 206
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
++L + L KW+K NL S D +RH+ DS+ V +PY +ID+G+G G
Sbjct: 22 QRLLGYVSLLDKWNKAYNLTSVRDPRDMLVRHIMDSIVV---NPYLQGQRFIDVGTGPGL 78
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAP 136
PGI +I L++S K+ FLR V ++ +R + F + E P
Sbjct: 79 PGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELHLDNIEPVQSRVEAF---VAEPP 132
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA A L ++ +
Sbjct: 133 -----FDGVISRAFASLQDMVSW 150
>gi|323705841|ref|ZP_08117413.1| methyltransferase GidB [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534837|gb|EGB24616.1| methyltransferase GidB [Thermoanaerobacterium xylanolyticum LX-11]
Length = 240
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 9/135 (6%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQ 92
L L+W++K+NL + + + I+H DSL + ID+G+G GFP + I
Sbjct: 34 LLLEWNEKMNLTAITEEREIIIKHFLDSLTALKCKVIKGSERIIDVGAGAGFPSVPLKIL 93
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITTCDVISAR 148
S++ + +++S K+ FL +V + ++ R ++ + + D+ +R
Sbjct: 94 YPSLK---LTIVDSLKKRTVFLDELVSYLNLKDVEIIHGRAEDLGKDSGLREKYDISLSR 150
Query: 149 ALADLDTLLEYSFPW 163
A+A L+ L+EY P+
Sbjct: 151 AVAQLNVLVEYCIPF 165
>gi|91229125|ref|ZP_01262898.1| glucose-inhibited division protein B [Vibrio alginolyticus 12G01]
gi|269965287|ref|ZP_06179408.1| Glucose inhibited division protein [Vibrio alginolyticus 40B]
gi|91187437|gb|EAS73780.1| glucose-inhibited division protein B [Vibrio alginolyticus 12G01]
gi|269830088|gb|EEZ84316.1| Glucose inhibited division protein [Vibrio alginolyticus 40B]
Length = 211
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VS + E+L + L KW+K NL S D ++H+ DS+ V H +ID+G
Sbjct: 18 EVSEQQREQLVGYVELLDKWNKAYNLTSVRDPLDMLVKHILDSI-VVSAHLPGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I L++S K+ F++ VV + R++E Q
Sbjct: 77 TGPGLPGIPLAIMNPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTPIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDGVLSRAFASMTDMVEW 153
>gi|262200037|ref|YP_003271246.1| methyltransferase GidB [Haliangium ochraceum DSM 14365]
gi|262083384|gb|ACY19353.1| methyltransferase GidB [Haliangium ochraceum DSM 14365]
Length = 211
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-IDLGSGGGFPGIITS 90
+ L KW++KINL S E HV D L + + P ++ +D+GSG G PG + +
Sbjct: 31 YLELLAKWNRKINLTGSREPEAL-AAHVVDCLALLRHIPADAVQAVDVGSGAGLPGAVVA 89
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYV 117
+ +E V +E +KK +FL V
Sbjct: 90 ALMPGLE---VTALEPIHKKHAFLSAV 113
>gi|262367752|gb|ACY64309.1| glucose inhibited division protein B [Yersinia pestis D182038]
Length = 173
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S + +RH+ DS+ V H S +ID+G+G G PGI +I
Sbjct: 30 LLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPHLQGSRFIDVGTGPGLPGIPLAIVRP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDVIS 146
L++S K+ FLR V ++ +R + F E P D +
Sbjct: 89 DAH---FTLLDSLGKRVRFLRQVQHELGLNNIEPVQSRVEAFTS---EPP-----FDGVI 137
Query: 147 ARALADLDTLLEY 159
+RA A L +L +
Sbjct: 138 SRAFASLQDMLSW 150
>gi|221633259|ref|YP_002522484.1| methyltransferase GidB [Thermomicrobium roseum DSM 5159]
gi|221156899|gb|ACM06026.1| methyltransferase GidB [Thermomicrobium roseum DSM 5159]
Length = 254
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 21/144 (14%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYPSIWIDLGSGGGFPGII 88
L L+W+++INL R + +SL + P ID+G+G G PGI
Sbjct: 36 LLLQWNRQINLTGLDEWSAIQRRLLVESLALLPWVDRACERKTPCRMIDVGTGAGIPGIP 95
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFACRIQEAPQMIT 140
++ S+ ++ L+++ KK FL VVQ+ R +V A P
Sbjct: 96 IAVVRPSL---MITLLDATKKKIRFLETVVQQLRLANVVPIHERAEVLA----HQPAHRG 148
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
+ +ARALA L T E + P+L
Sbjct: 149 RYHLATARALAHLATACELTLPFL 172
>gi|261415842|ref|YP_003249525.1| glucose inhibited division protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372298|gb|ACX75043.1| glucose inhibited division protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 217
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 13 NYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL------- 63
N L+ + V S ETL+KL F L + + NL+S+ E F RH+ DSL
Sbjct: 14 NQFLSGHGVQLSEETLDKLYQFADLVVDTKEYGNLISAKDSEKFLSRHIADSLVPFVFLG 73
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ W D+G+G G P +I + +++ +E ++ + +F++ V +K
Sbjct: 74 KTLSTQDDTVRWADMGAGAGCPVFPLAIAMPNVQ---FYAVEPRHMRVNFMQMVKEKLHL 130
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALA 151
V R + + +T D IS RAL+
Sbjct: 131 DNLTVVGKRFETSG--LTDLDFISCRALS 157
>gi|237747166|ref|ZP_04577646.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes HOxBLS]
gi|229378517|gb|EEO28608.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes HOxBLS]
Length = 221
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L KL + L KW+ NL + H+ DSL + +D+GSGGG P
Sbjct: 27 LNKLSTYLVLLSKWNAIYNLTAIRDWRAMLTHHLMDSLSIVPFLLECKNLLDVGSGGGLP 86
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
G+I +I ++ V LI+ +KK +F+ V + A + V R++E + DV
Sbjct: 87 GLILAIAYPELK---VTLIDIVHKKTAFMNQVKIELALKNVTVCTGRVEEL-FVDKKFDV 142
Query: 145 ISARALADLDTLLEYS 160
I +RA + L + S
Sbjct: 143 IVSRAFSSLSDFVSLS 158
>gi|149924590|ref|ZP_01912946.1| methyltransferase GidB [Plesiocystis pacifica SIR-1]
gi|149814556|gb|EDM74140.1| methyltransferase GidB [Plesiocystis pacifica SIR-1]
Length = 237
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 36 FLK-WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI---WIDLGSGGGFPGIITSI 91
FLK + + NL S D HV + L++ L + W+D+GSGGGFPG++ +I
Sbjct: 58 FLKFYGRAANLTGSLADADL-DAHVIEGLQLVALARQLGVQGRWLDIGSGGGFPGLVLAI 116
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAA------RGKVFAC--RIQEAPQMITTCD 143
L + L+E + K+A L ++K RG++ R E + D
Sbjct: 117 GLDL----QLTLVEPREKRADLLTLGLRKLGRADCEVLRGRIDGGQWRGIEGGPLEPGFD 172
Query: 144 VISARALADLDTLLEYSFPWL 164
SARA+ + + + PWL
Sbjct: 173 ACSARAVFEPERWVREGGPWL 193
>gi|154706726|ref|YP_001423622.1| 16S rRNA methyltransferase GidB [Coxiella burnetii Dugway
5J108-111]
gi|189039500|sp|A9KBS7|RSMG_COXBN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154356012|gb|ABS77474.1| methyltransferase [Coxiella burnetii Dugway 5J108-111]
Length = 204
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 24 ETLEKLEYFYFLFL-KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGS 80
ET+++ + + FL KW++ NL + + ++ H+ DSL + PY +D+GS
Sbjct: 18 ETIQQSMFAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSIL---PYLKGDKILDVGS 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQE---AP 136
G GFPGI + + LI+SK KK +FL + A+R K+ IQE +
Sbjct: 75 GAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLL----QAASRFKITNVTIIQERVGSY 127
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I+ RAL + ++E +
Sbjct: 128 QPGFYFDTITCRALGSVREIMEQT 151
>gi|146313754|ref|YP_001178828.1| 16S rRNA methyltransferase GidB [Enterobacter sp. 638]
gi|166989745|sp|A4WGE7|RSMG_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145320630|gb|ABP62777.1| 16S rRNA m(7)G-527 methyltransferase [Enterobacter sp. 638]
Length = 207
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S + IRH+ DS+ V H +ID+G+G G PGI SI
Sbjct: 33 KWNKAYNLTSVRDPNEMLIRHILDSI-VVAPHLRGERFIDVGTGPGLPGIPLSIVRPECH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ FLR V + + R++ P VIS RA A L+ +
Sbjct: 92 ---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEAFPSEPPFDGVIS-RAFASLNDM 147
Query: 157 LEY 159
+ +
Sbjct: 148 VSW 150
>gi|194467503|ref|ZP_03073490.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
gi|194454539|gb|EDX43436.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
Length = 241
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVF---QLHPYPSIWI 76
+S E +++ +Y L ++ ++ +NL + ++ +++H DS + F +L
Sbjct: 17 LSAEQMQQFADYYRLLVETNEHVNLTRITEKDEVYLKHFYDSIMGAFAEPRLESEELTLC 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVF 128
D+G+G GFP + I ++ V +++S NK+ +FL +V K R + F
Sbjct: 77 DIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEDLVAKLGLTDVTLIHDRAETF 133
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + +P D+++ARA+A L L E P
Sbjct: 134 SAK--NSPYR-EKFDIVTARAVARLSVLSELCLP 164
>gi|295402129|ref|ZP_06812088.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|312112750|ref|YP_003991066.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
gi|294975812|gb|EFG51431.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|311217851|gb|ADP76455.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
Length = 238
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----- 75
+S + L + E +Y L ++W++K+NL + + +++H DSL P+ +
Sbjct: 17 LSSQALAQFERYYELLIEWNEKMNLTAITDKPSVYLKHFFDSLS-------PAFYYDFSQ 69
Query: 76 ----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--- 128
D+G+G GFP I I ++ +++++S K+ FL ++ + F
Sbjct: 70 SLSLCDVGAGAGFPSIPLKICFPHLK---LSVVDSLQKRIHFLEHLAAELGLADVEFYHD 126
Query: 129 -ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + + DV+ ARA+A + L E P +
Sbjct: 127 RAETFGRNKEFRESFDVVIARAVARMPVLSELCLPLV 163
>gi|312882251|ref|ZP_07741997.1| 16S rRNA methyltransferase GidB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370095|gb|EFP97601.1| 16S rRNA methyltransferase GidB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 210
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 15 LLNTYNVSRETL--EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
L++ N+ T+ EKL + L KW+K NL S + I+H+ DS+ V + +
Sbjct: 11 LIDQTNLEVSTIQKEKLLGYVSLLDKWNKAYNLTSVRKPSEMVIKHIMDSIVVSE-YLEG 69
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ID+G+G G PGI +I + E L++S K+ F++ V+ + +
Sbjct: 70 DRFIDVGTGPGLPGIPLAIMQPNKE---FVLLDSLGKRVRFIKQVIHELDIKNVTPVQSR 126
Query: 133 QEAPQMITTCDVISARALADLDTLLEY 159
E Q D + +RA A + ++E+
Sbjct: 127 VEEYQTNDKFDGVLSRAFASMTDMVEW 153
>gi|261749369|ref|YP_003257054.1| glucose-inhibited division protein B [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
gi|261497461|gb|ACX83911.1| glucose-inhibited division protein B [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 203
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L+ W+ +NL+S T +F+ +HV L +VF P S +DLG+GGGFPGI SI
Sbjct: 25 LYAYWNAYVNLISRKTFHNFYQQHVLFCLGIAKVFTFFP-GSCVMDLGTGGGFPGIPLSI 83
Query: 92 QLSSIEGGLVN 102
E LV+
Sbjct: 84 VFPHTEFILVD 94
>gi|261213273|ref|ZP_05927555.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC341]
gi|260837547|gb|EEX64250.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC341]
Length = 210
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
T +VS + E+L + L KW+K NL S + ++H+ DS+ V H +I
Sbjct: 15 TTLSVSEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSM-VVSPHLNGERFI 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G G PGI +I + L++S K+ FL+ V+ +
Sbjct: 74 DVGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHE 114
>gi|227538457|ref|ZP_03968506.1| glucose-inhibited cell division protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241643|gb|EEI91658.1| glucose-inhibited cell division protein [Sphingobacterium
spiritivorum ATCC 33300]
Length = 211
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---IDLGSGGGFPGIITSI 91
L+ W+ +IN++S +E ++ HV SL + + + +D+G+GGGFPGI +I
Sbjct: 29 LYPFWNNQINVISRKDIESLYLHHVLHSLGIAKFMTEITAGTHILDVGTGGGFPGIPLAI 88
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
++ +L++S KK +R V TA A Q+ D + +RA+
Sbjct: 89 LFPEVK---FHLVDSIGKKIKVVREVA--TALGLTNVEADHMRAEQLDYKYDFVVSRAVT 143
Query: 152 DLDTLLEYSFPWLYQK 167
L PW+ K
Sbjct: 144 RLGDFA----PWIRNK 155
>gi|297627569|ref|YP_003689332.1| methyltransferase gidB (glucose-inhibited division protein B)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296923334|emb|CBL57934.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 261
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ E + + + + + L+ E W RH+ + + ++ +D+GSG G
Sbjct: 71 DQFESMSGYVDILVGQGVEWGLLGPREPERIWSRHIMNCAALLEVIGEGVDVLDVGSGAG 130
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG++ +I + V L+E ++ +FL+ V + G+V R A + D
Sbjct: 131 LPGLVIAIARPDLN---VTLLEPLLRRFNFLKEAVDELGLDGQVLVER-GRAEDLKQHFD 186
Query: 144 VISARALADLDTLLEYSFP 162
V++ RA+A L LL ++ P
Sbjct: 187 VVTCRAVARLPKLLGWTMP 205
>gi|170766772|ref|ZP_02901225.1| methyltransferase GidB [Escherichia albertii TW07627]
gi|170124210|gb|EDS93141.1| methyltransferase GidB [Escherichia albertii TW07627]
Length = 207
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIAPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 143 SLNDMVSW 150
>gi|302552689|ref|ZP_07305031.1| 16S rRNA methyltransferase GidB [Streptomyces viridochromogenes DSM
40736]
gi|302470307|gb|EFL33400.1| 16S rRNA methyltransferase GidB [Streptomyces viridochromogenes DSM
40736]
Length = 238
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 28 YAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E I V+
Sbjct: 88 VREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVMGKIQPVHVV 139
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLATWGIPLL 158
>gi|227327864|ref|ZP_03831888.1| glucose-inhibited division protein B [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 206
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S + +RH+ DS+ V + H +ID+G+G G PGI +I
Sbjct: 33 KWNKAYNLTSVRDPQQMLVRHIMDSI-VVEPHLDGQRFIDVGTGPGLPGIPLAIVRPESH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ FLR V + R++E P VIS RA A L +
Sbjct: 92 ---FTLLDSLGKRVRFLRQVQHELQLENITPVQSRVEEFPAEPPFDGVIS-RAFASLQDM 147
Query: 157 LEY 159
+ +
Sbjct: 148 ISW 150
>gi|126438347|ref|YP_001074038.1| 16S rRNA methyltransferase GidB [Mycobacterium sp. JLS]
gi|189045864|sp|A3Q8S0|RSMG_MYCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126238147|gb|ABO01548.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. JLS]
Length = 225
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
Y FL ++ L+ + W RH+ +S + +L D+GSG G PGI +
Sbjct: 24 YAEFLATAGVER-GLIGPRETDRIWDRHILNSAALGELVESGDRIADIGSGAGLPGIPLA 82
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISAR 148
+ + V LIE ++ FL VV V R ++ + + DV+++R
Sbjct: 83 LARPDVH---VTLIEPMQRRCEFLTEVVDALGVAVIVVRGRAEDPAVRREVGEMDVVTSR 139
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+ LD L +S L +
Sbjct: 140 AVGSLDKLATWSMGILRE 157
>gi|237786650|ref|YP_002907355.1| glucose-inhibited division protein B [Corynebacterium
kroppenstedtii DSM 44385]
gi|237759562|gb|ACR18812.1| glucose-inhibited division protein B [Corynebacterium
kroppenstedtii DSM 44385]
Length = 253
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 29 LEYFYFLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
L Y L+ + L+ W RH+ + + +L S +D+GSG G PGI
Sbjct: 62 LAVAYHESLRSDATVRGLIGPREAPRLWERHILNCAVIGELMDRDSRVVDIGSGAGLPGI 121
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITT 141
+I ++ + LIE + ++ ++L +V K + RG+ I+ +
Sbjct: 122 PLAIARPDLD---ITLIEPQLRRVNYLEEIVGKLGLDNVSVVRGRAEEKTIK---RQNRG 175
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D +++RA+A L L+ +S P Q
Sbjct: 176 ADYVTSRAVAPLGKLMGWSLPLTRQ 200
>gi|171920429|ref|ZP_02931744.1| methyltransferase GidB [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186701591|ref|ZP_02971303.1| methyltransferase GidB [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|171902876|gb|EDT49165.1| methyltransferase GidB [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186700819|gb|EDU19101.1| methyltransferase GidB [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 236
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ ++ R ++
Sbjct: 77 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 133
Query: 135 APQ-MITTCDVISARALADLDTLLEYS 160
Q M + DV ++RA+A LD +LE S
Sbjct: 134 LTQSMRESFDVATSRAVASLDKILEIS 160
>gi|309805118|ref|ZP_07699171.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
gi|308165572|gb|EFO67802.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
Length = 239
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWIDLGSGG 82
E+ +Y + ++K NL + ++ +++H DSL + ++ D+G+G
Sbjct: 23 EQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLTPIIKFREIISNAESLCDVGAGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT- 140
GFP + I I+ + +I+S K+ +FL +V++ + R ++A + I
Sbjct: 83 GFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKL 139
Query: 141 --TCDVISARALADLDTLLEYSFPWL 164
DV++ARA+A + L EY P +
Sbjct: 140 RENFDVVTARAVARMSVLSEYCLPLV 165
>gi|226362888|ref|YP_002780668.1| 16S rRNA methyltransferase GidB [Rhodococcus opacus B4]
gi|226241375|dbj|BAH51723.1| methyltransferase GidB [Rhodococcus opacus B4]
Length = 227
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + E +Y + L+ V W RH+ + V +L +D+GSG G
Sbjct: 26 ERFDIAERYYKSLATDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAG 85
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI +I + + L+E +++ +L V+ V R +E+ +
Sbjct: 86 LPGIPLAIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGG 142
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L+ L ++S P +++
Sbjct: 143 ADVVTSRAVAPLEKLAKWSLPLIHE 167
>gi|315058440|gb|ADT72769.1| Ribosomal RNA small subunit methyltransferase G [Campylobacter
jejuni subsp. jejuni S3]
Length = 188
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L S +L E KKA+FLR + ++ ++ ++QE D
Sbjct: 75 PAVFLAFLLQSN----FHLFEPNPKKAAFLRTLKIECELPNLHIYKKKVQEYKNTFKA-D 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDVKPLLE 144
>gi|187930941|ref|YP_001890925.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187711850|gb|ACD30147.1| methyltransferase GidB [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 202
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 30 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADL 153
+ L++S KK FL+ V + + RI+ + D I +RA + +
Sbjct: 89 QHQ---FTLVDSVGKKIMFLKNVKKNLSLNNINPLNTRIE---NLEGNFDNIISRAFSSV 142
Query: 154 DTLLE 158
DT E
Sbjct: 143 DTFYE 147
>gi|116750027|ref|YP_846714.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
gi|193806434|sp|A0LLH7|RSMG1_SYNFM RecName: Full=Ribosomal RNA small subunit methyltransferase G 1;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 1; Short=16S rRNA m7G
methyltransferase 1
gi|116699091|gb|ABK18279.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
Length = 220
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 1 MKYCDSNSILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
M+ S LRA LN + VS + E L L L+W+ + NL + + H
Sbjct: 1 MRETPSPQTLRA--FLNGHGIAVSPQQAEMLFEHVRLMLEWNLRSNLTRITEFDRILTAH 58
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ DSL + P +D+G+G GFPG+ I + + L+ES KK SFL+ ++
Sbjct: 59 LLDSLLPARWLPLTGKTLDVGTGAGFPGVPLKILHPETQ---MYLLESNRKKVSFLKVLL 115
Query: 119 QKTAARG-KVFACRIQEAPQMITTCD 143
+ G V R +E T D
Sbjct: 116 AGLSLPGIHVLHGRWEEPEGWFTEED 141
>gi|218297061|ref|ZP_03497738.1| methyltransferase GidB [Thermus aquaticus Y51MC23]
gi|218242616|gb|EED09153.1| methyltransferase GidB [Thermus aquaticus Y51MC23]
Length = 242
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 29/155 (18%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV------------EDSLRVFQLHPYPS 73
L+ Y L L+ ++K +L + T + +H E LRV
Sbjct: 26 LKAFSTLYDLLLEGNRKASLTALRTEREVVAKHFLDSLTLLLLPLWEGPLRV-------- 77
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV----FA 129
+DLG+G GFPG+ I +E V L+++ KK +FL VV +G A
Sbjct: 78 --LDLGTGAGFPGLPLKIVRPELE---VVLLDATRKKVAFLEEVVAALGLKGAFPLWGRA 132
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ P+ ++ARA+A L L E P+L
Sbjct: 133 EEVAHLPEHREAYQRVTARAVAHLCVLAELGLPFL 167
>gi|170026422|ref|YP_001722927.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis YPIII]
gi|238688495|sp|B1JR33|RSMG_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169752956|gb|ACA70474.1| methyltransferase GidB [Yersinia pseudotuberculosis YPIII]
Length = 206
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S + +RH+ DS+ V H S +ID+G+G G PGI +I
Sbjct: 30 LLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPHLQGSRFIDVGTGPGLPGIPLAIVRP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLD 154
L++S K+ FLR V + EA D + +RA A L
Sbjct: 89 DAH---FTLLDSLGKRVRFLRQVQHELGLNNIELVQSRVEAFTSEPPFDGVISRAFASLQ 145
Query: 155 TLLEY 159
+L +
Sbjct: 146 DMLSW 150
>gi|332524942|ref|ZP_08401128.1| 16S rRNA methyltransferase GidB [Rubrivivax benzoatilyticus JA2]
gi|332108237|gb|EGJ09461.1| 16S rRNA methyltransferase GidB [Rubrivivax benzoatilyticus JA2]
Length = 207
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSIW 75
V+ +E LE + L +W+ NL + +H+ D L V + P +
Sbjct: 16 EVTPGQVEALERYLALLQRWNATYNLTAVRDPAQMLTQHLADCLAVVKPLAARLPAGRV- 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+D+GSGGG PG++ +I G V +++ KKA+F+R
Sbjct: 75 LDVGSGGGLPGVVLAIM-----GWDVTCVDTVGKKAAFIR 109
>gi|283956395|ref|ZP_06373875.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 1336]
gi|283792115|gb|EFC30904.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 1336]
Length = 188
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L S +L E KKA+FLR + ++ + ++ ++QE D
Sbjct: 75 PAVFLAFLLQSN----FHLFEPNPKKAAFLRTLKIECELSNLHIYKEKVQECKNTFKA-D 129
Query: 144 VISARALADLDTLLE 158
+I++R+L D+ LLE
Sbjct: 130 IITSRSLMDVKPLLE 144
>gi|254226942|ref|ZP_04920508.1| hypothetical protein VCV51_1868 [Vibrio cholerae V51]
gi|125620547|gb|EAZ48915.1| hypothetical protein VCV51_1868 [Vibrio cholerae V51]
Length = 210
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGEHFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQE-A 135
+G+G G PGI +I E L++S K+ FL+ V+ + R++E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLLVQSRVEEFD 131
Query: 136 PQMITTCDVISARALADLDTLLEY 159
P+ + D + +RA A + ++ +
Sbjct: 132 PE--SGFDGVLSRAFASMTDMVNW 153
>gi|296105466|ref|YP_003615612.1| 16S rRNA methyltransferase GidB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059925|gb|ADF64663.1| 16S rRNA methyltransferase GidB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 207
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
KW+K NL S + IRH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 33 KWNKAYNLTSVRDPNEMLIRHILDSIVVA---PYLNGERFIDVGTGPGLPGIPLSIVRPE 89
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
L++S K+ FLR V + R++E P VIS RA A L+
Sbjct: 90 SH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEEFPAEPPFDGVIS-RAFASLN 145
Query: 155 TLLEY 159
++ +
Sbjct: 146 DMVSW 150
>gi|283836164|ref|ZP_06355905.1| hypothetical protein CIT292_10590 [Citrobacter youngae ATCC 29220]
gi|291068358|gb|EFE06467.1| 16S rRNA methyltransferase GidB [Citrobacter youngae ATCC 29220]
Length = 207
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLKGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELGLTNITPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 143 SLNDMVSW 150
>gi|171920818|ref|ZP_02931995.1| methyltransferase GidB [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|185178850|ref|ZP_02964631.1| methyltransferase GidB [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188024382|ref|ZP_02997048.1| methyltransferase GidB [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188518462|ref|ZP_03003949.1| methyltransferase GidB [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|188524181|ref|ZP_03004245.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867429|ref|ZP_03079433.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273257|ref|ZP_03205793.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209554410|ref|YP_002284457.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225550480|ref|ZP_03771429.1| methyltransferase GidB [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|225551429|ref|ZP_03772375.1| methyltransferase GidB [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|171903586|gb|EDT49875.1| methyltransferase GidB [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|184209486|gb|EDU06529.1| methyltransferase GidB [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188018650|gb|EDU56690.1| methyltransferase GidB [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188998134|gb|EDU67231.1| methyltransferase GidB [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|195659979|gb|EDX53359.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660905|gb|EDX54158.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249777|gb|EDY74557.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209541911|gb|ACI60140.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225379244|gb|EEH01609.1| methyltransferase GidB [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|225379634|gb|EEH01996.1| methyltransferase GidB [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 236
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ ++ R ++
Sbjct: 77 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 133
Query: 135 APQ-MITTCDVISARALADLDTLLEYS 160
Q M + DV ++RA+A LD +LE S
Sbjct: 134 LTQSMRESFDVATSRAVASLDKILEIS 160
>gi|153829675|ref|ZP_01982342.1| hypothetical protein A59_0021 [Vibrio cholerae 623-39]
gi|148874851|gb|EDL72986.1| hypothetical protein A59_0021 [Vibrio cholerae 623-39]
Length = 210
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE-A 135
+G+G G PGI +I E L++S K+ FL+ V+ + R++E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPVQSRVEEFD 131
Query: 136 PQMITTCDVISARALADLDTLLEY 159
P+ ++ D + +RA A + ++ +
Sbjct: 132 PE--SSFDGVLSRAFASMTDMVNW 153
>gi|317503188|ref|ZP_07961249.1| glucose inhibited division protein B [Prevotella salivae DSM 15606]
gi|315665691|gb|EFV05297.1| glucose inhibited division protein B [Prevotella salivae DSM 15606]
Length = 209
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGG 83
++ E L+ W+ KIN++S +++ + HV SL +V + P I +D G+GGG
Sbjct: 18 QQYEMLDALYRDWNSKINVISRKDIDNLYEHHVLHSLAIAKVLRFKPSTEI-LDFGTGGG 76
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKAS 112
FPGI +I L++ I K + A+
Sbjct: 77 FPGIPLAIMFPQCRFHLIDGIGKKIRVAT 105
>gi|62263584|gb|AAX78174.1| unknown protein [synthetic construct]
Length = 240
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 59 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 117
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 118 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPLNTRIE---NLEGNFDNIISRAFSS 170
Query: 153 LDTLLE 158
+DT E
Sbjct: 171 VDTFYE 176
>gi|260595794|ref|YP_003208365.1| 16S rRNA methyltransferase GidB [Cronobacter turicensis z3032]
gi|260214971|emb|CBA26598.1| Ribosomal RNA small subunit methyltransferase G [Cronobacter
turicensis z3032]
Length = 207
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + + KW+K NL S + +RH+ DS+ V + H S +ID+G+G G PGI
Sbjct: 23 QLVAYVDMLNKWNKAYNLTSVRDPNEMLVRHIMDSI-VVEPHLKGSRFIDVGTGPGLPGI 81
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
SI L++S K+ FLR V + R++ P VIS
Sbjct: 82 PLSIVRPDSH---FTLLDSLGKRVRFLRQVQHELKLDNIAPVQSRVEAFPAEPPFDGVIS 138
Query: 147 ARALADLDTLLEY 159
RA A L ++ +
Sbjct: 139 -RAFASLSDMVNW 150
>gi|188996632|ref|YP_001930883.1| methyltransferase GidB [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931699|gb|ACD66329.1| methyltransferase GidB [Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------DLG 79
+E + + + LKW+K NL S ++ I+H DSL + +L +I + D G
Sbjct: 21 IELFDKYISMLLKWNKVYNLTSVRKKDEIVIKHFLDSLTLVKLFEAKAINVEDKEIADFG 80
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G GFPG+ +++ + + LIES NKK FL + ++ V R A +
Sbjct: 81 TGAGFPGV--PLKIYYQDKIKLYLIESINKKCIFLEMLKKELKIDYTVLCDR---AENID 135
Query: 140 TTCDVISARALAD 152
D++ +RA +
Sbjct: 136 KKFDIVVSRATGE 148
>gi|86152702|ref|ZP_01070907.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612782|ref|YP_001000676.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|148926093|ref|ZP_01809779.1| gidB like protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|167005598|ref|ZP_02271356.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|205356708|ref|ZP_03223469.1| gidB [Campylobacter jejuni subsp. jejuni CG8421]
gi|166224579|sp|A1VZY5|RSMG_CAMJJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85843587|gb|EAQ60797.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87249119|gb|EAQ72080.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|145845572|gb|EDK22664.1| gidB like protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|205345446|gb|EDZ32088.1| gidB [Campylobacter jejuni subsp. jejuni CG8421]
Length = 188
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L S +L E KKA+FLR + ++ ++ ++QE D
Sbjct: 75 PAVFLAFLLQSN----FHLFEPNPKKAAFLRTLKIECELPNLHIYKEKVQEYKNTFKA-D 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDVKPLLE 144
>gi|309780415|ref|ZP_07675165.1| 16S rRNA methyltransferase GidB [Ralstonia sp. 5_7_47FAA]
gi|308920808|gb|EFP66455.1| 16S rRNA methyltransferase GidB [Ralstonia sp. 5_7_47FAA]
Length = 222
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ + L A ++ +++L + L KW++ NL + D H+ DSL
Sbjct: 6 TDARAELEAGARALGLSLDEAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 65
Query: 64 ----RVFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
R+ +L P +D+GSGGG PGI +I + +V++++ KK +FL
Sbjct: 66 SAVSRIAELARRAQPDAPRVLDVGSGGGLPGIPLAIAFPDVSVTMVDIVQ---KKTAFL 121
>gi|297539953|ref|YP_003675722.1| methyltransferase GidB [Methylotenera sp. 301]
gi|297259300|gb|ADI31145.1| methyltransferase GidB [Methylotenera sp. 301]
Length = 217
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S L++ L + E KL + L KW+K NL + + H+ DSL V
Sbjct: 8 QSKLQSGLLEMDLQIDAEKQAKLIAYLLLIDKWNKVHNLTAIRDPLEMVTLHLLDSLSVL 67
Query: 67 QLHPY-----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P+ P +D+G+G G P I +I L ++ V I+S KK SF+R V +
Sbjct: 68 ---PHVQALTPKCLLDVGAGAGLPSIPLAICLPELQ---VTAIDSVAKKTSFMRQVKGEL 121
Query: 122 AARG-KVFACRIQEAPQMITTCDVISARALADL 153
+V R+ EA + DVI +RA +++
Sbjct: 122 GLSNFQVEVGRV-EALKKDVKFDVIISRAFSEI 153
>gi|328676167|gb|AEB27037.1| Ribosomal RNA small subunit methyltransferase G [Francisella cf.
novicida Fx1]
Length = 202
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 30 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 89 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPLNTRIE---NLEGNFDNIISRAFSS 141
Query: 153 LDTLLE 158
+DT E
Sbjct: 142 VDTFYE 147
>gi|89255506|ref|YP_512867.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica LVS]
gi|115314026|ref|YP_762749.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica OSU18]
gi|156501436|ref|YP_001427501.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167009351|ref|ZP_02274282.1| methyltransferase GidB [Francisella tularensis subsp. holarctica
FSC200]
gi|167010276|ref|ZP_02275207.1| methyltransferase GidB [Francisella tularensis subsp. holarctica
FSC200]
gi|208780015|ref|ZP_03247358.1| methyltransferase GidB [Francisella novicida FTG]
gi|254366932|ref|ZP_04982969.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica 257]
gi|290954265|ref|ZP_06558886.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica URFT1]
gi|295312329|ref|ZP_06803116.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica URFT1]
gi|122325911|sp|Q0BP72|RSMG_FRATO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122501364|sp|Q2A5Y4|RSMG_FRATH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224588|sp|A7N992|RSMG_FRATF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89143337|emb|CAJ78500.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica LVS]
gi|115128925|gb|ABI82112.1| glucose-inhibited cell division protein [Francisella tularensis
subsp. holarctica OSU18]
gi|134252759|gb|EBA51853.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica 257]
gi|156252039|gb|ABU60545.1| methyltransferase/glucose inhibited cell division protein B
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|208744019|gb|EDZ90320.1| methyltransferase GidB [Francisella novicida FTG]
Length = 205
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 33 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 91
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 92 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPLNTRIE---NLEGNFDNIISRAFSS 144
Query: 153 LDTLLE 158
+DT E
Sbjct: 145 VDTFYE 150
>gi|295426138|ref|ZP_06818805.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
gi|295064174|gb|EFG55115.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
Length = 240
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ ++++ + + E ++ ++ ++ +NL + ED +++H DS + L + ++
Sbjct: 13 HNFDLTDKQKTQFEQYFKDLVETNEHVNLTRITDKEDVYLKHFFDS--ITPLFTFKDVFT 70
Query: 77 ------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFA 129
D+G+G GFP I I L ++ + +++S K+ +FL+ ++ K + ++
Sbjct: 71 KGATLCDVGAGAGFPSIPLKILLPDLK---ITIVDSLAKRLTFLKELIAKLGLSEVELVH 127
Query: 130 CRIQEAPQMI---TTCDVISARALADLDTLLEYSFPWL 164
R ++ Q D+++ARA+A++ L EY P +
Sbjct: 128 GRAEDVGQNKLYREHFDLVTARAVANMTVLSEYCLPLV 165
>gi|322835094|ref|YP_004215121.1| methyltransferase GidB [Rahnella sp. Y9602]
gi|321170295|gb|ADW75994.1| methyltransferase GidB [Rahnella sp. Y9602]
Length = 206
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S +RH+ DS+ V + H S +ID+G+G G PG
Sbjct: 22 QQLIGYVELLHKWNKAYNLTSVRDPMQMLVRHIMDSIVVNE-HLQGSRFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDV 144
I +I L++S K+ FLR V + + + R++E P + D
Sbjct: 81 IPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLKNIEPVQSRVEEFEPDPL--FDG 135
Query: 145 ISARALADLDTLLEY 159
+ +RA A L +L +
Sbjct: 136 VISRAFASLQDMLSW 150
>gi|126659305|ref|ZP_01730441.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
gi|126619387|gb|EAZ90120.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
Length = 241
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-----FQLHPYPS 73
+ ++E LEK E Y L +++INL + ++FW +H+ DSL F +
Sbjct: 16 WQPTQEQLEKWEILYQEILLINRQINLTRITEPQEFWEKHLWDSLAGVIGLDFLNYKDSL 75
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
ID+G+G GFPG+ SI + L++ + K K + ++ + ++ V A I
Sbjct: 76 KVIDIGTGAGFPGLPISIIFPHWQLTLLDSTQKKIKVINLFLEALKLSNSQTVVGRAEAI 135
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
PQ D+ RA+ + EY P+L
Sbjct: 136 GHLPQHREKYDLGLIRAVGEPSVCAEYVLPFL 167
>gi|84394518|ref|ZP_00993228.1| glucose-inhibited division protein B [Vibrio splendidus 12B01]
gi|84374871|gb|EAP91808.1| glucose-inhibited division protein B [Vibrio splendidus 12B01]
Length = 148
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS + +L + L KW+K NL S ++ ++H+ DS+ + H +ID+G+
Sbjct: 19 VSEKQRGQLVGYVELLNKWNKAYNLTSVRDPQEMMVKHILDSI-IVSTHLQGKRFIDVGT 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMI 139
G G PGI SI E L++S K+ F++ V+ + V R++E Q
Sbjct: 78 GPGLPGIPLSIMNPDCE---FYLLDSLGKRIRFIKQVIHELGIDNVVPVQSRVEEF-QPE 133
Query: 140 TTCDVISARALADL 153
D + +RA A +
Sbjct: 134 EKFDAVLSRAFASM 147
>gi|299531162|ref|ZP_07044574.1| 16S rRNA methyltransferase GidB [Comamonas testosteroni S44]
gi|298720865|gb|EFI61810.1| 16S rRNA methyltransferase GidB [Comamonas testosteroni S44]
Length = 220
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-----QLHPYPS------I 74
++ L F L KW+K NL S ++ H+ DSL ++ P
Sbjct: 25 IDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPALLRHVNCLPQEEGKRLP 84
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR--I 132
+D+GSGGG PG++ +I I+ VN +++ KKA+F +Q+ AA ++ R
Sbjct: 85 LLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAF----IQQVAASLRLPNLRGIH 137
Query: 133 QEAPQMITTCDVISARALADL 153
+ T VIS RA A L
Sbjct: 138 DRVENLKTRYPVISCRAFASL 158
>gi|255037112|ref|YP_003087733.1| methyltransferase GidB [Dyadobacter fermentans DSM 18053]
gi|254949868|gb|ACT94568.1| methyltransferase GidB [Dyadobacter fermentans DSM 18053]
Length = 206
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L+ W+ ++N++S ++ + RHV SL +V Q P +I +D+G+GGGFPG+ +I
Sbjct: 25 LYEYWNARVNVISRQDIDTLYERHVLHSLGIAKVQQFRPGTAI-LDVGTGGGFPGVPLAI 83
Query: 92 QLSSIEGGLVNLIESK 107
+ LV+ I K
Sbjct: 84 MFPEAQFHLVDSIGKK 99
>gi|22128011|ref|NP_671434.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM 10]
gi|45443759|ref|NP_995298.1| 16S rRNA methyltransferase GidB [Yersinia pestis biovar Microtus
str. 91001]
gi|21961159|gb|AAM87685.1|AE014015_10 glucose-inhibited division protein [Yersinia pestis KIM 10]
gi|45438629|gb|AAS64175.1| glucose inhibited division protein B [Yersinia pestis biovar
Microtus str. 91001]
Length = 223
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S + +RH+ DS+ V H S +ID+G+G G PGI +I
Sbjct: 47 LLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPHLQGSRFIDVGTGPGLPGIPLAIVRP 105
Query: 95 SIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDVIS 146
L++S K+ FLR V ++ +R + F E P D +
Sbjct: 106 DAH---FTLLDSLGKRVRFLRQVQHELGLNNIEPVQSRVEAFTS---EPP-----FDGVI 154
Query: 147 ARALADLDTLLEY 159
+RA A L +L +
Sbjct: 155 SRAFASLQDMLSW 167
>gi|290968162|ref|ZP_06559707.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
gi|290781837|gb|EFD94420.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
Length = 237
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWID 77
++ + +E+ F+ ++ +K +NL + ++ ++H+ DSL + ++ + +D
Sbjct: 16 SIQPQQMEQYTKFFEYLVEINKVMNLTKLTAPDEVALKHMADSLSCYDEEIFKVRATVLD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKVFACR 131
LG+G GFPGI I ++ + +S K+ F+ V Q G+
Sbjct: 76 LGTGAGFPGIPLKIYRPDLQ---LTFFDSLKKRLQFISCVTDLLQIKQTVCLHGRAEDLA 132
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
Q+ + D++++RA+A L L E++ P++
Sbjct: 133 HQDVYR--EQFDLVTSRAVARLSVLAEWALPYV 163
>gi|70733508|ref|YP_263283.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens Pf-5]
gi|82592864|sp|Q4K3A0|RSMG_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68347807|gb|AAY95413.1| methyltransferase GidB [Pseudomonas fluorescens Pf-5]
Length = 211
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
+KW+K NL + ++ RH+ DSL V W+D+GSGGG PGI +I
Sbjct: 37 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFIEN-GCWLDVGSGGGMPGIPLAILFPES 95
Query: 97 EGGLVNLIESKNKKASFLRYV 117
+ V ++S KK FL V
Sbjct: 96 Q---VTCLDSNGKKTRFLTQV 113
>gi|311109649|ref|YP_003982502.1| methyltransferase [Achromobacter xylosoxidans A8]
gi|310764338|gb|ADP19787.1| methyltransferase GidB [Achromobacter xylosoxidans A8]
Length = 229
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 25/150 (16%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---------PSIW 75
T+ KL + +W++ NL + + I+H+ DSL + P+ P+
Sbjct: 31 TMAKLLNYLSQMQRWNRTYNLTAIRDPQQMLIQHLFDSLAA--VGPFNEALGASGTPAKV 88
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+GSGGG PG++ +I V +++ KK +F+R + G + +Q +
Sbjct: 89 YDVGSGGGLPGVVLAIMRPHWS---VTCVDAVEKKTAFVRQM------SGVLALPNLQAS 139
Query: 136 PQMITT-----CDVISARALADLDTLLEYS 160
I T C+++++RA A LD + +
Sbjct: 140 HARIETLTPAECNIVTSRAFASLDDFAQLA 169
>gi|288927301|ref|ZP_06421148.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 317 str.
F0108]
gi|288330135|gb|EFC68719.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 317 str.
F0108]
Length = 206
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGG 83
LE+L L+ W+++IN+VS +++ ++ HV SL + + + + +D G+GGG
Sbjct: 16 LEQLTQLGELYRTWNERINVVSRKDIDNLYLHHVLHSLAIAKYVQFKAGTRVLDFGTGGG 75
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQMITTC 142
FPGI +I L+ ++ A +R + AA G A Q+A +
Sbjct: 76 FPGIPLAIVFPECRFKLI------DRTAKKIRVTQEIAAAIGLTNATAEQKAGEEEWGEY 129
Query: 143 DVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 130 DFVVSRAVMPLPDLMK 145
>gi|283954548|ref|ZP_06372067.1| hypothetical protein C414_000230048 [Campylobacter jejuni subsp.
jejuni 414]
gi|283793952|gb|EFC32702.1| hypothetical protein C414_000230048 [Campylobacter jejuni subsp.
jejuni 414]
Length = 188
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
+K++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 KKVKIYKELLQKFNRIHNLTHLKNIDE----NILDSVKILNFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P I + L S +L E KKA+FLR + ++ ++ ++QE D
Sbjct: 75 PAIFLAFLLQSN----FHLFEPNPKKAAFLRTLKIECELLNLHIYKEKVQECKNTFKA-D 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDIKPLLE 144
>gi|254372080|ref|ZP_04987573.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. novicida GA99-3549]
gi|151569811|gb|EDN35465.1| methyltransferase glucose-inhibited cell division protein
[Francisella novicida GA99-3549]
Length = 205
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 33 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 91
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 92 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPLNTRIE---NLEGNFDNIISRAFSS 144
Query: 153 LDTLLE 158
+DT E
Sbjct: 145 VDTFYE 150
>gi|38257425|sp|Q82FE3|RSMG_STRAW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 238
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 28 YAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E I V+
Sbjct: 88 VREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVIRG-----RAEEVMGKIPPVHVV 139
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLATWGIPLL 158
>gi|310288300|ref|YP_003939559.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum S17]
gi|309252237|gb|ADO53985.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum S17]
Length = 232
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 21/167 (12%)
Query: 16 LNTYNVSRETL----EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------LRV 65
L+ + RE L +KLE F+ + + L+ + W RH+ +S +R
Sbjct: 14 LDDSAIVREALGEAYDKLEVFHVKLSREGELRGLIGPRDISIIWERHILNSAACVPFIRE 73
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---- 121
D+GSGGGFPGI+ + + E LIE ++ +L+ V
Sbjct: 74 VTDRSKAKTIADVGSGGGFPGIVAAACMPDCE---FTLIEPMERRVEWLQECVDDMDLQN 130
Query: 122 ----AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
AR RI+ + V++ RA+A + L ++ P L
Sbjct: 131 VTIIRARSDEVIDRIKHHEGELKPFSVVTCRAVAPMTKLAGWTLPLL 177
>gi|253997704|ref|YP_003049768.1| methyltransferase GidB [Methylotenera mobilis JLW8]
gi|253984383|gb|ACT49241.1| methyltransferase GidB [Methylotenera mobilis JLW8]
Length = 225
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +KL + L KW++ NL + + H+ DSL V H +D+G+G G
Sbjct: 35 EQTQKLLDYVALIYKWNQVHNLTAVREPMEMVTLHILDSLSVLA-HIECKRLLDVGAGAG 93
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE----APQM 138
P I +I L ++ V I++ KK SF+R V + A V RI+E + +M
Sbjct: 94 LPSIPLAICLPELQ---VTSIDAVQKKVSFMRQVKAELGLANFSVIHGRIEEQTVPSKEM 150
Query: 139 ITTCDVISARALADL 153
DVI +RA +++
Sbjct: 151 PEKFDVIISRAFSEI 165
>gi|229524903|ref|ZP_04414308.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
bv. albensis VL426]
gi|229338484|gb|EEO03501.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
bv. albensis VL426]
Length = 210
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+G+G G PGI +I E L++S K+ FL+ V+ +
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHE 114
>gi|134302726|ref|YP_001122694.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis WY96-3418]
gi|166224590|sp|A4J072|RSMG_FRATW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134050503|gb|ABO47574.1| Methyltransferase gidB (glucose- inhibited division protein B)
[Francisella tularensis subsp. tularensis WY96-3418]
Length = 205
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 33 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 91
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 92 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPLNTRIE---NLEGNFDNIISRAFSS 144
Query: 153 LDTLLE 158
+DT E
Sbjct: 145 VDTFYE 150
>gi|56708696|ref|YP_170592.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110671168|ref|YP_667725.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis FSC198]
gi|224457904|ref|ZP_03666377.1| glucose-inhibited division protein B [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254368470|ref|ZP_04984487.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica FSC022]
gi|254371326|ref|ZP_04987328.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC033]
gi|254875570|ref|ZP_05248280.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|81597046|sp|Q5NEF0|RSMG_FRATT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122970832|sp|Q14FV3|RSMG_FRAT1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56605188|emb|CAG46320.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110321501|emb|CAL09703.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC198]
gi|151569566|gb|EDN35220.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC033]
gi|157121364|gb|EDO65565.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica FSC022]
gi|254841569|gb|EET20005.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|282159946|gb|ADA79337.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis NE061598]
Length = 205
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 33 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 91
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 92 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPLNTRIE---NLEGNFDNIISRAFSS 144
Query: 153 LDTLLE 158
+DT E
Sbjct: 145 VDTFYE 150
>gi|145301182|ref|YP_001144023.1| 16S rRNA methyltransferase GidB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166224343|sp|A4STQ3|RSMG_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|142853954|gb|ABO92275.1| glucose inhibited division protein B [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 208
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S + ++H+ DSL V H + +ID+G+G G PG+ +I
Sbjct: 30 LLHKWNKAYNLTSVRDPDAMLVKHILDSL-VVSPHLHGERFIDVGTGPGLPGLPLAI--I 86
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVISARALADL 153
+ + V L++S K+ +F+R V+Q R++E Q D + +RA A L
Sbjct: 87 NPDKQFV-LLDSLGKRINFIRQVIQVLGLTNVTPVKSRVEEY-QPDVGFDCVLSRAFASL 144
Query: 154 DTLLEY 159
+ +L +
Sbjct: 145 EDMLSW 150
>gi|51598259|ref|YP_072450.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis IP
32953]
gi|108810164|ref|YP_654080.1| 16S rRNA methyltransferase GidB [Yersinia pestis Antiqua]
gi|108814146|ref|YP_649913.1| 16S rRNA methyltransferase GidB [Yersinia pestis Nepal516]
gi|145601144|ref|YP_001165220.1| 16S rRNA methyltransferase GidB [Yersinia pestis Pestoides F]
gi|150260937|ref|ZP_01917665.1| glucose inhibited division protein B [Yersinia pestis CA88-4125]
gi|153947796|ref|YP_001403126.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis IP
31758]
gi|162419517|ref|YP_001608480.1| 16S rRNA methyltransferase GidB [Yersinia pestis Angola]
gi|165926220|ref|ZP_02222052.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939988|ref|ZP_02228525.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009598|ref|ZP_02230496.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213356|ref|ZP_02239391.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401525|ref|ZP_02307019.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422855|ref|ZP_02314608.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425517|ref|ZP_02317270.1| methyltransferase GidB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167468639|ref|ZP_02333343.1| glucose-inhibited division protein B [Yersinia pestis FV-1]
gi|186897460|ref|YP_001874572.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis PB1/+]
gi|218931105|ref|YP_002348980.1| 16S rRNA methyltransferase GidB [Yersinia pestis CO92]
gi|229839839|ref|ZP_04459998.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229841923|ref|ZP_04462079.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229896800|ref|ZP_04511963.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Pestoides A]
gi|229904689|ref|ZP_04519800.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Nepal516]
gi|270488399|ref|ZP_06205473.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM D27]
gi|294505651|ref|YP_003569713.1| glucose-inhibited division protein B [Yersinia pestis Z176003]
gi|20177890|sp|Q8Z9R9|RSMG_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81638065|sp|Q663Q0|RSMG_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122979241|sp|Q1C087|RSMG_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122979846|sp|Q1CCG7|RSMG_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224630|sp|A4TSI5|RSMG_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166989557|sp|A7FPE8|RSMG_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238687313|sp|A9R5U7|RSMG_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691429|sp|B2K7J3|RSMG_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51591541|emb|CAH23213.1| glucose inhibited division protein B [Yersinia pseudotuberculosis
IP 32953]
gi|108777794|gb|ABG20313.1| glucose inhibited division protein B [Yersinia pestis Nepal516]
gi|108782077|gb|ABG16135.1| glucose inhibited division protein B [Yersinia pestis Antiqua]
gi|115349716|emb|CAL22697.1| glucose inhibited division protein B [Yersinia pestis CO92]
gi|145212840|gb|ABP42247.1| glucose inhibited division protein B [Yersinia pestis Pestoides F]
gi|149290345|gb|EDM40422.1| glucose inhibited division protein B [Yersinia pestis CA88-4125]
gi|152959291|gb|ABS46752.1| methyltransferase GidB [Yersinia pseudotuberculosis IP 31758]
gi|162352332|gb|ABX86280.1| methyltransferase GidB [Yersinia pestis Angola]
gi|165912114|gb|EDR30754.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922080|gb|EDR39257.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991520|gb|EDR43821.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205654|gb|EDR50134.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958247|gb|EDR55268.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048907|gb|EDR60315.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055531|gb|EDR65324.1| methyltransferase GidB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186700486|gb|ACC91115.1| methyltransferase GidB [Yersinia pseudotuberculosis PB1/+]
gi|229678807|gb|EEO74912.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Nepal516]
gi|229691262|gb|EEO83315.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229696205|gb|EEO86252.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229700238|gb|EEO88274.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Pestoides A]
gi|262363816|gb|ACY60537.1| glucose-inhibited division protein B [Yersinia pestis D106004]
gi|270336903|gb|EFA47680.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM D27]
gi|294356110|gb|ADE66451.1| glucose-inhibited division protein B [Yersinia pestis Z176003]
gi|320017464|gb|ADW01036.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 206
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S + +RH+ DS+ V H S +ID+G+G G PGI +I
Sbjct: 30 LLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPHLQGSRFIDVGTGPGLPGIPLAIVRP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDVIS 146
L++S K+ FLR V ++ +R + F E P D +
Sbjct: 89 DAH---FTLLDSLGKRVRFLRQVQHELGLNNIEPVQSRVEAFTS---EPP-----FDGVI 137
Query: 147 ARALADLDTLLEY 159
+RA A L +L +
Sbjct: 138 SRAFASLQDMLSW 150
>gi|297158785|gb|ADI08497.1| 16S rRNA methyltransferase GidB [Streptomyces bingchenggensis
BCW-1]
Length = 237
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ + + L
Sbjct: 40 GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALTRPDLR---ITL 96
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL+ VV+ T RG R +E + V++ARA+A LD L
Sbjct: 97 LEPLLRRTNFLQEVVELLGLDHVTVVRG-----RAEEVLGKLPPMHVVTARAVAPLDRLA 151
Query: 158 EYSFPWL 164
+ P L
Sbjct: 152 GWGVPLL 158
>gi|54112557|gb|AAV28912.1| NT02FT1550 [synthetic construct]
Length = 205
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 33 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 91
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 92 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPLNTRIE---NLEGNFDNIISRAFSS 144
Query: 153 LDTLLE 158
+DT E
Sbjct: 145 VDTFYE 150
>gi|229491187|ref|ZP_04385015.1| 16S rRNA methyltransferase GidB [Rhodococcus erythropolis SK121]
gi|229321925|gb|EEN87718.1| 16S rRNA methyltransferase GidB [Rhodococcus erythropolis SK121]
Length = 223
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E E +Y + L+ V W RH+ + + +L +D+GSG G PG
Sbjct: 26 EIAERYYQSLATDGVERGLIGPREVPRLWERHLLNCAVIGELIAEGESVVDVGSGAGLPG 85
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDV 144
I +I ++ V L+E +++ +L ++ V R +E+ + DV
Sbjct: 86 IPLAIARPDLK---VTLVEPLLRRSVYLAEFIESNGLDVLVVRGRAEESGVVKEAGGADV 142
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
+++RA+A L+ L +S P +++
Sbjct: 143 VTSRAVAPLEKLARWSLPLIHE 164
>gi|226309511|ref|YP_002769473.1| methyltransferase GidB [Rhodococcus erythropolis PR4]
gi|226188630|dbj|BAH36734.1| methyltransferase GidB [Rhodococcus erythropolis PR4]
Length = 226
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E E +Y + L+ V W RH+ + + +L +D+GSG G PG
Sbjct: 29 EIAERYYQSLATDGVERGLIGPREVPRLWERHLLNCAVIGELIAEGESVVDVGSGAGLPG 88
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDV 144
I +I ++ V L+E +++ +L ++ V R +E+ + DV
Sbjct: 89 IPLAIARPDLK---VTLVEPLLRRSVYLAEFIESNGLDVLVVRGRAEESGVVKEAGGADV 145
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
+++RA+A L+ L +S P +++
Sbjct: 146 VTSRAVAPLEKLARWSLPLIHE 167
>gi|315078980|gb|EFT50992.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL053PA2]
Length = 211
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S+ + L P D+GSG G PGI +I +E + L
Sbjct: 39 GLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MTL 95
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
IE ++++FL + + +V R A DV+ +RA+A L TL+ ++
Sbjct: 96 IEPMLRRSNFLTEALDELGLDDRVTVVR-GRAEDADLRVDVVVSRAVAKLATLINWTADL 154
Query: 164 LYQ 166
+ +
Sbjct: 155 IVE 157
>gi|229593491|ref|YP_002875610.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens SBW25]
gi|229365357|emb|CAY53741.1| glucose inhibited division protein B methyltransferase [Pseudomonas
fluorescens SBW25]
Length = 214
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLS 94
+KW+K NL + ++ RH+ DSL V P+ W+D+GSGGG PGI +I
Sbjct: 40 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVM---PFIENGRWLDVGSGGGMPGIPLAILFP 96
Query: 95 SIEGGLVNLIESKNKKASFLRYV 117
+ V ++S KK FL V
Sbjct: 97 ESQ---VTCLDSNGKKTRFLTQV 116
>gi|254391434|ref|ZP_05006636.1| methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|294813734|ref|ZP_06772377.1| Methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|197705123|gb|EDY50935.1| methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|294326333|gb|EFG07976.1| Methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
Length = 248
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ ++ + L
Sbjct: 49 GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRPDLK---ITL 105
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL+ VV+ T RG R +E + V++ARA+A LD L
Sbjct: 106 LEPLLRRTNFLQEVVELLGLDHVTVVRG-----RAEEVLGKLPPVHVVTARAVAPLDRLA 160
Query: 158 EYSFPWL 164
+ P L
Sbjct: 161 GWGVPLL 167
>gi|157377626|ref|YP_001476226.1| glucose-inhibited division protein B [Shewanella sediminis HAW-EB3]
gi|189040718|sp|A8G1X5|RSMG_SHESH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157320000|gb|ABV39098.1| methyltransferase GidB [Shewanella sediminis HAW-EB3]
Length = 206
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F + KW+K NL S + IRH+ DSL V H +ID+G+G G PGI +I
Sbjct: 28 FVEMLNKWNKAYNLTSIRDPQQMLIRHIMDSLAV-SPHLVGERFIDVGTGPGLPGIPLAI 86
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
+ + V L++S K+ F + V + + EA Q T D + +RA A
Sbjct: 87 M--NPDKTFV-LLDSLGKRIRFQKQVQHELGIKNISSVESRVEAYQPETKFDGVLSRAFA 143
Query: 152 DLDTLLEY 159
++ +L +
Sbjct: 144 SIEDMLHW 151
>gi|317151994|ref|YP_004120042.1| glucose inhibited division protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942245|gb|ADU61296.1| glucose inhibited division protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 221
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 17/142 (11%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRV------FQLHPYPSIWIDLGSGGGFPGIIT 89
+KW+ K+NLV S + V DSL + L P + +DLG+G G PGI
Sbjct: 37 LVKWNAKMNLVGPSDWRTIFDTLVVDSLYLADFLNGLDLGNAP-LCLDLGAGAGLPGIPL 95
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI------TTC 142
I G L+ES++K+A+F+R V + VF R ++A + T
Sbjct: 96 RILWPH---GDYWLVESRDKRATFMRSAVGRLGLTATSVFHGRAEDALDRLARHGQHATA 152
Query: 143 DVISARALADLDTLLEYSFPWL 164
D+I +RA LL + P L
Sbjct: 153 DLIVSRAFMPWPQLLPFVRPML 174
>gi|313792580|gb|EFS40666.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA1]
gi|313803581|gb|EFS44763.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA2]
gi|313839609|gb|EFS77323.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL086PA1]
gi|314963887|gb|EFT07987.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL082PA1]
gi|327457427|gb|EGF04082.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL092PA1]
Length = 211
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S+ + L P D+GSG G PGI +I +E + L
Sbjct: 39 GLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MTL 95
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
IE ++++FL + + +V R A DV+ +RA+A L TL+ ++
Sbjct: 96 IEPMLRRSNFLTEALDELGLDDRVTVVR-GRAEDADLRVDVVVSRAVAKLATLINWTADL 154
Query: 164 LYQ 166
+ +
Sbjct: 155 IVE 157
>gi|227113931|ref|ZP_03827587.1| glucose-inhibited division protein B [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 206
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S + +RH+ DS+ V + H + +ID+G+G G PGI +I
Sbjct: 33 KWNKAYNLTSVRDPQQMLVRHIMDSI-VVEPHLHGQRFIDVGTGPGLPGIPLAIVRPDSH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ FLR V + R++ P VIS RA A L +
Sbjct: 92 ---FTLLDSLGKRVRFLRQVQHELQLENITPVQSRVEAFPAEPPFDGVIS-RAFASLQDM 147
Query: 157 LEY 159
+ +
Sbjct: 148 ISW 150
>gi|326442155|ref|ZP_08216889.1| 16S rRNA methyltransferase GidB [Streptomyces clavuligerus ATCC
27064]
Length = 240
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ ++ + L
Sbjct: 41 GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRPDLK---ITL 97
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL+ VV+ T RG R +E + V++ARA+A LD L
Sbjct: 98 LEPLLRRTNFLQEVVELLGLDHVTVVRG-----RAEEVLGKLPPVHVVTARAVAPLDRLA 152
Query: 158 EYSFPWL 164
+ P L
Sbjct: 153 GWGVPLL 159
>gi|170762322|ref|YP_001752119.1| methyltransferase GidB [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|183508528|ref|ZP_02958052.1| methyltransferase GidB [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|189040729|sp|B1AI25|RSMG_UREP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168827899|gb|ACA33161.1| methyltransferase GidB [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|182675965|gb|EDT87870.1| methyltransferase GidB [Ureaplasma parvum serovar 14 str. ATCC
33697]
Length = 236
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ ++ R ++
Sbjct: 77 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 133
Query: 135 APQ-MITTCDVISARALADLDTLLEYS 160
Q M + D+ ++RA+A LD +LE S
Sbjct: 134 LTQSMRESFDIATSRAVASLDKILEIS 160
>gi|168239644|ref|ZP_02664702.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194734008|ref|YP_002116816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|238690702|sp|B4TN41|RSMG_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194709510|gb|ACF88731.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197287674|gb|EDY27065.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 207
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 87 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEYSFPWLYQ 166
L+ ++ W +Q
Sbjct: 143 SLNDMVS----WCHQ 153
>gi|118496713|ref|YP_897763.1| glucose-inhibited cell division protein [Francisella tularensis
subsp. novicida U112]
gi|194324020|ref|ZP_03057795.1| methyltransferase GidB [Francisella tularensis subsp. novicida FTE]
gi|166224589|sp|A0Q444|RSMG_FRATN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118422619|gb|ABK89009.1| glucose-inhibited cell division protein [Francisella novicida U112]
gi|194321917|gb|EDX19400.1| methyltransferase GidB [Francisella tularensis subsp. novicida FTE]
Length = 205
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 33 LLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 91
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 92 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPINTRIE---NLEGNFDNIISRAFSS 144
Query: 153 LDTLLE 158
+DT E
Sbjct: 145 VDTFYE 150
>gi|223038816|ref|ZP_03609108.1| 16S rRNA methyltransferase GidB [Campylobacter rectus RM3267]
gi|222879789|gb|EEF14878.1| 16S rRNA methyltransferase GidB [Campylobacter rectus RM3267]
Length = 185
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-----IDLGSGGGFPGIITSIQLSSI 96
K N V S T + DS+ ++ +P IW ID+GSG GFP I ++ L
Sbjct: 22 KFNRVHSLTSYKNLNEQIADSIAPLEI--FPQIWGAKTAIDVGSGAGFPAIFLAMILREC 79
Query: 97 EGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
E +L E KK+SFL YV + V AC+I++ T +I++RAL
Sbjct: 80 E---WHLFEPSPKKSSFLSYVKAELNLTNVCVKACKIEDGEPF--TAQLITSRALMKTKD 134
Query: 156 LL 157
LL
Sbjct: 135 LL 136
>gi|315420681|gb|ADU15873.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLRRTEFLREMVTDRGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|282863325|ref|ZP_06272384.1| methyltransferase GidB [Streptomyces sp. ACTE]
gi|282561660|gb|EFB67203.1| methyltransferase GidB [Streptomyces sp. ACTE]
Length = 238
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E + Y L K+ L+ V W RH+ + + + P D+GSG G PG
Sbjct: 24 EAVRYAELLADAGVKR-GLIGPREVPRLWGRHLLNCAVLSEAVPEGVTVCDVGSGAGLPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMIT 140
I ++ ++ + L+E ++ +FL+ VV+ T RG R +E +
Sbjct: 83 IPLALVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRG-----RAEEVLGSLP 134
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
V++ARA+A LD L + P L
Sbjct: 135 PVHVVTARAVAPLDRLAGWGVPLL 158
>gi|153212978|ref|ZP_01948572.1| hypothetical protein A55_0019 [Vibrio cholerae 1587]
gi|153803601|ref|ZP_01958187.1| hypothetical protein A51_B2828 [Vibrio cholerae MZO-3]
gi|229515959|ref|ZP_04405416.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
TMA 21]
gi|229520163|ref|ZP_04409590.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae TM
11079-80]
gi|297581980|ref|ZP_06943900.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|124116204|gb|EAY35024.1| hypothetical protein A55_0019 [Vibrio cholerae 1587]
gi|124120866|gb|EAY39609.1| hypothetical protein A51_B2828 [Vibrio cholerae MZO-3]
gi|229342757|gb|EEO07748.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae TM
11079-80]
gi|229347059|gb|EEO12021.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
TMA 21]
gi|297533847|gb|EFH72688.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 210
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+G+G G PGI +I E L++S K+ FL+ V+
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIH 113
>gi|296167148|ref|ZP_06849555.1| methyltransferase GidB [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897470|gb|EFG77069.1| methyltransferase GidB [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 241
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ VE W RH+ +S V +L ID+GSG G PGI ++ ++ V L
Sbjct: 51 GLLGPREVERIWDRHLLNSAAVAELLEPGDRVIDIGSGAGLPGIPLALARPDVD---VVL 107
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E +++ FL V++ +V R ++ D +RA+A LD L ++S
Sbjct: 108 LEPLLRRSEFLSEAVEQLGLAVEVVRGRAEDPWVRDRFGERDAAVSRAVASLDKLAKWSV 167
Query: 162 PWL 164
P L
Sbjct: 168 PLL 170
>gi|121730053|ref|ZP_01682462.1| hypothetical protein VCV52_0002 [Vibrio cholerae V52]
gi|121628202|gb|EAX60725.1| hypothetical protein VCV52_0002 [Vibrio cholerae V52]
Length = 210
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+G+G G PGI +I E L++S K+ FL+ V+
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIH 113
>gi|307565608|ref|ZP_07628088.1| 16S rRNA methyltransferase GidB [Prevotella amnii CRIS 21A-A]
gi|307345767|gb|EFN91124.1| 16S rRNA methyltransferase GidB [Prevotella amnii CRIS 21A-A]
Length = 208
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
++S + +++ Y L+ W+ KIN++S +++ + HV S+ + +L + + +D
Sbjct: 12 DLSDKQIKQFSLLYDLYQDWNAKINIISRKDIDNLYEHHVLHSMAIAKLIHFKAGTTILD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
G+GGGFPGI +I + +++ K K A+
Sbjct: 72 FGTGGGFPGIPLAILFPEVSFKMIDGTGKKIKVAT 106
>gi|197286881|ref|YP_002152753.1| glucose-inhibited division protein B [Proteus mirabilis HI4320]
gi|194684368|emb|CAR46007.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis HI4320]
Length = 208
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
+KL + + KW+K NL S + IRH+ DS+ V Q + + +ID+G+G G PG
Sbjct: 25 QKLTAYVAMLDKWNKAYNLTSVRDPQQMLIRHILDSIVVSQ-YLKGNNFIDVGTGPGLPG 83
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
I +I L++S K+ F++ V + A + R++E Q+ D +
Sbjct: 84 IPLAIMRPDHH---FVLLDSLGKRVRFMKQVQHELALHNIEPVQYRVEEY-QVEKPFDGV 139
Query: 146 SARALADLDTLL 157
+RA A + +L
Sbjct: 140 ISRAFASMKDML 151
>gi|119475230|ref|ZP_01615583.1| glucose-inhibited division protein B [marine gamma proteobacterium
HTCC2143]
gi|119451433|gb|EAW32666.1| glucose-inhibited division protein B [marine gamma proteobacterium
HTCC2143]
Length = 215
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
++ L +KW+K NL + + RH+ DSL V PY + +ID+G+G G PGI+
Sbjct: 31 YHQLLVKWNKAYNLTAVRNSREMISRHLLDSLTVA---PYLHGNRFIDIGAGAGLPGIVL 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQEAPQMITTCDVISA 147
+I + +L++S KK FL + V+ G + R+++ + T + I +
Sbjct: 88 AILFPERQ---FDLLDSNGKKTRFL-FQVKTELGLGNITIHHSRVEQL-SVEHTYEGILS 142
Query: 148 RALADLDTLLEYS 160
RA A L ++ S
Sbjct: 143 RAFASLADMVNCS 155
>gi|227529772|ref|ZP_03959821.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
gi|227350256|gb|EEJ40547.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
Length = 253
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VF---QLHPYPSIW 75
N+S +++ +Y L + ++ +NL + ++ +++H DS+ VF +L
Sbjct: 28 NLSDAQMKQFAEYYDLLVATNEHVNLTRITEKKEVYLKHFFDSISGVFAEPKLMTDELTL 87
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKV 127
D+G+G GFP I I ++ V +++S NK+ FL+ +V + R +
Sbjct: 88 CDIGAGAGFPSIPIKIAFPQLK---VTIVDSLNKRIIFLQELVDQLGLSDVTLVHDRAET 144
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
F+ + + + D+++ARA+A L L E P
Sbjct: 145 FSAKRSDHREQY---DIVTARAVARLAVLSELCLP 176
>gi|313771079|gb|EFS37045.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL074PA1]
gi|313806843|gb|EFS45341.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA2]
gi|313811756|gb|EFS49470.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL083PA1]
gi|313814234|gb|EFS51948.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL025PA1]
gi|313815712|gb|EFS53426.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL059PA1]
gi|313817631|gb|EFS55345.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL046PA2]
gi|313821544|gb|EFS59258.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA1]
gi|313824513|gb|EFS62227.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA2]
gi|313826857|gb|EFS64571.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL063PA1]
gi|313829175|gb|EFS66889.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL063PA2]
gi|313832290|gb|EFS70004.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL007PA1]
gi|313832750|gb|EFS70464.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL056PA1]
gi|314916200|gb|EFS80031.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA4]
gi|314917467|gb|EFS81298.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA1]
gi|314921804|gb|EFS85635.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA3]
gi|314926249|gb|EFS90080.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA3]
gi|314930931|gb|EFS94762.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL067PA1]
gi|314955401|gb|EFS99806.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL027PA1]
gi|314959145|gb|EFT03247.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA1]
gi|314961650|gb|EFT05751.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA2]
gi|314969096|gb|EFT13194.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA1]
gi|314975187|gb|EFT19282.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL053PA1]
gi|314977597|gb|EFT21692.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL045PA1]
gi|314979933|gb|EFT24027.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL072PA2]
gi|314985056|gb|EFT29148.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA1]
gi|314987125|gb|EFT31217.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA2]
gi|314990674|gb|EFT34765.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA3]
gi|315081510|gb|EFT53486.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL078PA1]
gi|315083066|gb|EFT55042.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL027PA2]
gi|315086601|gb|EFT58577.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA3]
gi|315088003|gb|EFT59979.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL072PA1]
gi|315097176|gb|EFT69152.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL038PA1]
gi|315099355|gb|EFT71331.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL059PA2]
gi|315102304|gb|EFT74280.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL046PA1]
gi|315107401|gb|EFT79377.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL030PA1]
gi|315109696|gb|EFT81672.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL030PA2]
gi|327332488|gb|EGE74223.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL096PA2]
gi|327334112|gb|EGE75827.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL096PA3]
gi|327444482|gb|EGE91136.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL013PA2]
gi|327446735|gb|EGE93389.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL043PA2]
gi|327448823|gb|EGE95477.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL043PA1]
gi|327454240|gb|EGF00895.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA3]
gi|327456299|gb|EGF02954.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL083PA2]
gi|328755997|gb|EGF69613.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA1]
gi|328757988|gb|EGF71604.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL020PA1]
gi|328758962|gb|EGF72578.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL025PA2]
gi|328759885|gb|EGF73475.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL099PA1]
Length = 211
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S+ + L P D+GSG G PGI +I +E + L
Sbjct: 39 GLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MTL 95
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
IE ++++FL + + +V R A DV+ +RA+A L TL+ ++
Sbjct: 96 IEPMLRRSNFLTEALDELGLDDRVTVVR-GRAEDADLHVDVVVSRAVAKLATLINWTADL 154
Query: 164 LYQ 166
+ +
Sbjct: 155 IVE 157
>gi|227354886|ref|ZP_03839301.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis ATCC 29906]
gi|227165039|gb|EEI49875.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis ATCC 29906]
Length = 208
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
+KL + + KW+K NL S + IRH+ DS+ V Q + + +ID+G+G G PG
Sbjct: 25 QKLTAYVAMLDKWNKAYNLTSVRDPQQMLIRHILDSIVVSQ-YLEGNNFIDVGTGPGLPG 83
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
I +I L++S K+ F++ V + A + R++E Q+ D +
Sbjct: 84 IPLAIMRPDHH---FVLLDSLGKRVRFMKQVQHELALHNIEPVQYRVEEY-QVEKPFDGV 139
Query: 146 SARALADLDTLL 157
+RA A + +L
Sbjct: 140 ISRAFASMKDML 151
>gi|260774972|ref|ZP_05883872.1| ribosomal RNA small subunit methyltransferase G [Vibrio
coralliilyticus ATCC BAA-450]
gi|260609062|gb|EEX35221.1| ribosomal RNA small subunit methyltransferase G [Vibrio
coralliilyticus ATCC BAA-450]
Length = 210
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VS ++L + + KW+K NL S D ++H+ DS+ V H +ID+G
Sbjct: 18 EVSDNQRDQLVGYVEMLNKWNKAYNLTSVRDPSDMLVKHILDSI-VVSSHLQGQRFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE-APQ 137
+G G PGI SI E L++S K+ F++ V+ + R++E PQ
Sbjct: 77 TGPGLPGIPLSIMNPDKE---FYLLDSLGKRIRFIKQVLHELKIENVTPIQSRVEEFQPQ 133
Query: 138 MITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 134 --DKFDGVLSRAFASMVDMVEW 153
>gi|197249483|ref|YP_002148810.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|226797830|sp|B5EZ06|RSMG_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|197213186|gb|ACH50583.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 207
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPG 86
L + + KW+K NL S + +RH+ DS+ V PY +ID+G+G G PG
Sbjct: 24 LAAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
I +I L L++S K+ FLR V + R++ P VI
Sbjct: 81 IPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVI 137
Query: 146 SARALADLDTLLEY 159
S RA A L+ ++ +
Sbjct: 138 S-RAFASLNDMVSW 150
>gi|15843553|ref|NP_338590.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis
CDC1551]
gi|31795092|ref|NP_857585.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis AF2122/97]
gi|121635905|ref|YP_976128.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|121639830|ref|YP_980054.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148663786|ref|YP_001285309.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis H37Ra]
gi|167969457|ref|ZP_02551734.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
H37Ra]
gi|215413847|ref|ZP_03422512.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
94_M4241A]
gi|215425181|ref|ZP_03423100.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T92]
gi|215432900|ref|ZP_03430819.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
EAS054]
gi|219555766|ref|ZP_03534842.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T17]
gi|224992325|ref|YP_002647015.1| glucose-inhibited division protein B [Mycobacterium bovis BCG str.
Tokyo 172]
gi|254233401|ref|ZP_04926727.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis C]
gi|254366455|ref|ZP_04982499.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis str. Haarlem]
gi|260184848|ref|ZP_05762322.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis CPHL_A]
gi|260198979|ref|ZP_05766470.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|260203132|ref|ZP_05770623.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis K85]
gi|289441362|ref|ZP_06431106.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|289445520|ref|ZP_06435264.1| chromosome partitioning protein parA [Mycobacterium tuberculosis
CPHL_A]
gi|289567876|ref|ZP_06448103.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T17]
gi|289572571|ref|ZP_06452798.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis K85]
gi|289748457|ref|ZP_06507835.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T92]
gi|289756054|ref|ZP_06515432.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis EAS054]
gi|298527391|ref|ZP_07014800.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 94_M4241A]
gi|306778283|ref|ZP_07416620.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu001]
gi|306778813|ref|ZP_07417150.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu002]
gi|306786840|ref|ZP_07425162.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu003]
gi|306786969|ref|ZP_07425291.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu004]
gi|306791524|ref|ZP_07429826.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu005]
gi|306795589|ref|ZP_07433891.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu006]
gi|306801564|ref|ZP_07438232.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu008]
gi|306805773|ref|ZP_07442441.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu007]
gi|306970170|ref|ZP_07482831.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu009]
gi|306974402|ref|ZP_07487063.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu010]
gi|307082110|ref|ZP_07491280.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu011]
gi|307086721|ref|ZP_07495834.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu012]
gi|38257378|sp|P59964|RSMG_MYCBO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045861|sp|A1KEG3|RSMG_MYCBP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045866|sp|A5U9P7|RSMG_MYCTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13883931|gb|AAK48404.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
CDC1551]
gi|31620690|emb|CAD96136.1| PROBABLE GLUCOSE-INHIBITED DIVISION PROTEIN B GID [Mycobacterium
bovis AF2122/97]
gi|121491552|emb|CAL70009.1| Probable glucose-inhibited division protein B GID [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|121495478|emb|CAL73967.1| Probable glucose-inhibited division protein B gid [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124603194|gb|EAY61469.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis C]
gi|134151967|gb|EBA44012.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis str. Haarlem]
gi|148507938|gb|ABQ75747.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
H37Ra]
gi|224775441|dbj|BAH28247.1| glucose-inhibited division protein B [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289414281|gb|EFD11521.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|289418478|gb|EFD15679.1| chromosome partitioning protein parA [Mycobacterium tuberculosis
CPHL_A]
gi|289537002|gb|EFD41580.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis K85]
gi|289541629|gb|EFD45278.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T17]
gi|289689044|gb|EFD56473.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T92]
gi|289696641|gb|EFD64070.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis EAS054]
gi|298497185|gb|EFI32479.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 94_M4241A]
gi|308213433|gb|EFO72832.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu001]
gi|308328150|gb|EFP17001.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu002]
gi|308328612|gb|EFP17463.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu003]
gi|308336267|gb|EFP25118.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu004]
gi|308339873|gb|EFP28724.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu005]
gi|308343885|gb|EFP32736.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu006]
gi|308347669|gb|EFP36520.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu007]
gi|308351587|gb|EFP40438.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu008]
gi|308352294|gb|EFP41145.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu009]
gi|308356297|gb|EFP45148.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu010]
gi|308360184|gb|EFP49035.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu011]
gi|308363871|gb|EFP52722.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu012]
gi|315420675|gb|ADU15870.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
gi|323717335|gb|EGB26540.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis CDC1551A]
Length = 224
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|312880835|ref|ZP_07740635.1| 16S rRNA m(7)G-527 methyltransferase [Aminomonas paucivorans DSM
12260]
gi|310784126|gb|EFQ24524.1| 16S rRNA m(7)G-527 methyltransferase [Aminomonas paucivorans DSM
12260]
Length = 229
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 19/158 (12%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L N+ R ++ +F L + + L + W HV D L P
Sbjct: 5 LTEPLNLLRRHEGEVRHFVALLATANTRARLTGPTDELVLWEDHVVDCAAALALLPQGGQ 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV----------VQKTAAR 124
ID+G+GGG PG++ ++ + V L++S +K + + + VQ R
Sbjct: 65 VIDVGTGGGLPGLVWALCRPDVA---VTLLDSVERKCALVGEMVQVLGLPPERVQVVCER 121
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ FA R +E D+ SARA+ + L E P
Sbjct: 122 SETFAARNRE------VFDLASARAVCEAGVLAEVLSP 153
>gi|256372783|ref|YP_003110607.1| glucose inhibited division protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256009367|gb|ACU54934.1| glucose inhibited division protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 218
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 16/86 (18%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK---------TAARG 125
W+DLGSGGG PG+I +++L + EG L++++ ++A+FL V+ A RG
Sbjct: 43 WVDLGSGGGIPGLIVALELPASEG---LLVDARQRRAAFLTEAVRALNWSARVRIAAERG 99
Query: 126 KVFACRIQEAPQMITTCDVISARALA 151
+V A + ++ D + AR
Sbjct: 100 EVLA----RSKEIRERADAVVARGFG 121
>gi|171462844|ref|YP_001796957.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192382|gb|ACB43343.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 222
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------LRVFQLHPYPS 73
+S + LE F +W++ N + +D H+ DS LR F P
Sbjct: 16 ELSLANIADLELFLQEMGRWNRVHNFTAIEGEKDSVRLHLIDSIAVLPVLRRFLNEASPR 75
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
I DLGSGGG P I +I ++LIE+ KK +FL++V K + +V + R
Sbjct: 76 I-ADLGSGGGLPAIPIAIIQPEWR---LSLIEAIRKKTAFLQHVRGKLKLKNIEVLSERA 131
Query: 133 QE-APQMITTCDVISARALADLDTLLEYSFPWL 164
+ A Q D + +RA +L LE S P L
Sbjct: 132 EAVAAQQSGQYDAVISRAFTNLARFLELSLPLL 164
>gi|123969209|ref|YP_001010067.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. AS9601]
gi|166224602|sp|A2BT49|RSMG_PROMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123199319|gb|ABM70960.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. AS9601]
Length = 237
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 25 TLEKLEYFYFLFLK---WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WID 77
T E++ F L +K + K NL + +D+W+ V DS+ F+ + ++D
Sbjct: 15 TEEEINLFQELQIKIKELNNKTNLTRLTDGDDYWVSQVFDSIWPFKAFTNINFDNKKFLD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-----RI 132
+GSG GFPG+ +I + E + LI+S KK ++ +V++ + + +
Sbjct: 75 IGSGCGFPGLAYAITHPNSE---IYLIDSLKKKTDAIKILVEQINFKNNIHVINDRVENL 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
M ++ + RA+++ T+ EY P L ++
Sbjct: 132 AHQSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|238765115|ref|ZP_04626049.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
kristensenii ATCC 33638]
gi|238696667|gb|EEP89450.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
kristensenii ATCC 33638]
Length = 206
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LLN ++ +K + ++ L KW+K NL S +RH+ DS+ V
Sbjct: 4 KLDSLLNAAGIALPDQQKHQLVGYVELLDKWNKAYNLTSVRDPMQMLVRHILDSI-VVNP 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQK 120
H + +ID+G+G G PGI +I L++S K+ FLR V ++
Sbjct: 63 HLQGNRFIDVGTGPGLPGIPLAIVRPDAH---FVLLDSLGKRVRFLRQVQHELGLSNIEP 119
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+R + FA + D + +RA A L +L +
Sbjct: 120 VQSRVEDFAAK--------PPFDGVISRAFASLQDMLSW 150
>gi|302341711|ref|YP_003806240.1| glucose inhibited division protein [Desulfarculus baarsii DSM 2075]
gi|301638324|gb|ADK83646.1| glucose inhibited division protein [Desulfarculus baarsii DSM 2075]
Length = 210
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
L+W++ I LV + + W+ D L + L P +D+G+G GFPG++ ++ L +
Sbjct: 39 LLRWNQSIRLVGHRAMGEAWLNLALDGLAMVPLL-GPGRLLDIGAGAGFPGLVLALALPA 97
Query: 96 IEGGLVNLIESKNKKASFLRYVVQ--KTAARGKVFACRIQEAPQMITTCDVISARALADL 153
+ V +I+ + KK SF ++ + +R R E + D +S RA+ D+
Sbjct: 98 LT---VTMIDGRAKKVSFQKHAARLLGLGSRVAPVVGRAGEGALAGQSFDFVSLRAVTDV 154
Query: 154 DTLLEYSFPW 163
L + P+
Sbjct: 155 AGSLALARPF 164
>gi|90581141|ref|ZP_01236940.1| glucose-inhibited division protein B [Vibrio angustum S14]
gi|90437662|gb|EAS62854.1| glucose-inhibited division protein B [Vibrio angustum S14]
Length = 206
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V+ + L++L + L KW+K NL S + ++H+ DS+ V + + +ID+G
Sbjct: 15 QVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-VVSHYLDGATYIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+G G PGI +I L++S K+ F+R V+ +
Sbjct: 74 TGPGLPGIPLAIMCPDKS---FTLLDSLGKRIRFIRQVIHE 111
>gi|153827711|ref|ZP_01980378.1| methyltransferase GidB [Vibrio cholerae MZO-2]
gi|149737814|gb|EDM52719.1| methyltransferase GidB [Vibrio cholerae MZO-2]
Length = 139
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+G+G G PGI +I E L++S K+ FL+ V+
Sbjct: 75 VGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIH 113
>gi|170729226|ref|YP_001763252.1| 16S rRNA methyltransferase GidB [Shewanella woodyi ATCC 51908]
gi|193806451|sp|B1KQ44|RSMG_SHEWM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169814573|gb|ACA89157.1| methyltransferase GidB [Shewanella woodyi ATCC 51908]
Length = 206
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L N+S T +K + F+ + KW+K NL S + IRH+ DSL V + H
Sbjct: 10 LAEMNLSATTEQKKQLVGFVEMLNKWNKAYNLTSIRDPQQMLIRHIMDSLAVSK-HLVGE 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ID+G+G G PGI +I + E V L++S K+ F + V +
Sbjct: 69 RFIDVGTGPGLPGIPLAIM--NPERSFV-LLDSLGKRIRFQKQVQHELGIHNISSVESRV 125
Query: 134 EAPQMITTCDVISARALADLDTLLEY 159
EA + D + +RA A ++ +L +
Sbjct: 126 EAFEPEVKFDGVLSRAFASIEDMLHW 151
>gi|218755711|ref|ZP_03534507.1| glucose-inhibited division protein B [Mycobacterium tuberculosis GM
1503]
gi|289764110|ref|ZP_06523488.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis GM 1503]
gi|297636606|ref|ZP_06954386.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis KZN
4207]
gi|289711616|gb|EFD75632.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis GM 1503]
gi|315420683|gb|ADU15874.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
gi|328460697|gb|AEB06120.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis KZN 4207]
Length = 224
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|315420677|gb|ADU15871.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|313765039|gb|EFS36403.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL013PA1]
Length = 211
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S+ + L P D+GSG G PGI +I +E + L
Sbjct: 39 GLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MTL 95
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
IE ++++FL + + +V R A DV+ +RA+A L TL+ ++
Sbjct: 96 IEPMLRRSNFLTEALDELGLDDRVTVVR-GRAEDADLHVDVVVSRAVAKLATLINWTADL 154
Query: 164 LYQ 166
+ +
Sbjct: 155 IVE 157
>gi|188535591|ref|YP_001909388.1| 16S rRNA methyltransferase GidB [Erwinia tasmaniensis Et1/99]
gi|238689684|sp|B2VCB2|RSMG_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188030633|emb|CAO98529.1| Methyltransferase GidB (Glucose-inhibited division protein B)
[Erwinia tasmaniensis Et1/99]
Length = 205
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 22/155 (14%)
Query: 15 LLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
LL T +S +K + + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 8 LLKTAGISLSDRQKQQLVGYVEMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLIG 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAAR 124
+ID+G+G G PG+ +I G L++S K+ FL+ V + +R
Sbjct: 67 ERFIDVGTGPGLPGVPLAIVRP---GAHFTLLDSLGKRVRFLKQVQHELKLDNITPVQSR 123
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ FA E P D + +RA A L+ ++ +
Sbjct: 124 VEEFAG---EPP-----FDGVISRAFASLNDMVSW 150
>gi|13357596|ref|NP_077870.1| glucose inhibited division protein B [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|13959380|sp|Q9PRA5|RSMG_UREPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|11356855|pir||E82942 glucose inhibited division protein B UU040 [imported] - Ureaplasma
urealyticum
gi|6898987|gb|AAF30445.1|AE002103_10 glucose inhibited division protein B [Ureaplasma parvum serovar 3
str. ATCC 700970]
Length = 214
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ ++ R ++
Sbjct: 55 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 111
Query: 135 APQ-MITTCDVISARALADLDTLLEYS 160
Q M + D+ ++RA+A LD +LE S
Sbjct: 112 LTQSMRESFDIATSRAVASLDKILEIS 138
>gi|293393680|ref|ZP_06637989.1| glucose inhibited division protein B [Serratia odorifera DSM 4582]
gi|291423802|gb|EFE97022.1| glucose inhibited division protein B [Serratia odorifera DSM 4582]
Length = 206
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 22/157 (14%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
+ LL +S +K + ++ + KW+K NL S + IRH+ DS+ V H
Sbjct: 6 DSLLAAAGISLPDRQKQQLLGYVGMLDKWNKAYNLTSVRDPQQMLIRHILDSI-VVNPHL 64
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTA 122
+ID+G+G G PGI +I L++S K+ FLR V ++
Sbjct: 65 AGMRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLNNIEPVQ 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+R + F + E P D + +RA A L +L +
Sbjct: 122 SRVEAF---VAEPP-----FDGVISRAFASLQDMLAW 150
>gi|291276349|ref|YP_003516121.1| glucose-inhibited division protein B [Helicobacter mustelae 12198]
gi|290963543|emb|CBG39375.1| glucose-inhibited division protein B; GidB [Helicobacter mustelae
12198]
Length = 179
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L L+W++ NL S + ++ DS+ + S ID+GSG GFP + +I
Sbjct: 15 LLLEWNQIHNL-SGNLTPRLAEEYLLDSIYPLEFIQSFSRCIDVGSGAGFPAVPLAICCP 73
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADL 153
E LIE +NK+A+FL+YV + +V RI+E D+I++RA+ D
Sbjct: 74 RSE---FLLIEPRNKRAAFLQYVSSELGLSNIQVKKMRIEEVGGRCV--DLITSRAVMDA 128
Query: 154 DTLL 157
+L+
Sbjct: 129 PSLI 132
>gi|260662612|ref|ZP_05863507.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum 28-3-CHN]
gi|260553303|gb|EEX26246.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum 28-3-CHN]
Length = 245
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------WIDLGSGGGFP 85
+Y L ++ ++ +NL + + + +++H DSL YP + D+G+G GFP
Sbjct: 28 YYQLLVQTNEHLNLTAITAETEVYLKHFYDSLT--GAFAYPKLQSQALTLCDIGAGAGFP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQ 137
+ I S +E V +++S NK+ +FL + V R + FA + +
Sbjct: 86 SLPLKIAFSQLE---VTIVDSLNKRINFLADLCDDLGLTGVHLVHDRAETFAAKGSPYRE 142
Query: 138 MITTCDVISARALADLDTLLEYSFP 162
D+++ARA+A L L E P
Sbjct: 143 QF---DLVTARAVARLVVLGELCLP 164
>gi|50843782|ref|YP_057009.1| glucose-inhibited division protein B [Propionibacterium acnes
KPA171202]
gi|289424162|ref|ZP_06425945.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK187]
gi|289427458|ref|ZP_06429171.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J165]
gi|295131872|ref|YP_003582535.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK137]
gi|55976373|sp|Q6A5B2|RSMG_PROAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50841384|gb|AAT84051.1| glucose inhibited division protein B [Propionibacterium acnes
KPA171202]
gi|289154859|gb|EFD03541.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK187]
gi|289159388|gb|EFD07579.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J165]
gi|291376738|gb|ADE00593.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK137]
gi|332676737|gb|AEE73553.1| ribosomal RNA small subunit methyltransferase G [Propionibacterium
acnes 266]
Length = 208
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S+ + L P D+GSG G PGI +I +E + L
Sbjct: 36 GLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MTL 92
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
IE ++++FL + + +V R A DV+ +RA+A L TL+ ++
Sbjct: 93 IEPMLRRSNFLTEALDELGLDDRVTVVR-GRAEDADLHVDVVVSRAVAKLATLINWTADL 151
Query: 164 LYQ 166
+ +
Sbjct: 152 IVE 154
>gi|168234384|ref|ZP_02659442.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194469918|ref|ZP_03075902.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456282|gb|EDX45121.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205331682|gb|EDZ18446.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 207
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 87 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 143 SLNDMVSW 150
>gi|95929979|ref|ZP_01312719.1| methyltransferase GidB [Desulfuromonas acetoxidans DSM 684]
gi|95133948|gb|EAT15607.1| methyltransferase GidB [Desulfuromonas acetoxidans DSM 684]
Length = 219
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+S E E ++ + L W++KINL + W +H+ DSL + + S +D+G
Sbjct: 15 QLSSEQYELIDQYLDELLVWNRKINLTAIRQKNICWQKHIIDSLMLGEFIDPDSCLLDIG 74
Query: 80 SGGGFPGIITSI---QLSSIEGGLVNLIESKNKKASFLRYVVQK 120
SG G P I I QLS V +++ +KK F ++ V+K
Sbjct: 75 SGAGLPSIPLKIFYPQLS------VTSVDTVSKKIQFQKHCVRK 112
>gi|149190484|ref|ZP_01868755.1| glucose-inhibited division protein B [Vibrio shilonii AK1]
gi|148835738|gb|EDL52704.1| glucose-inhibited division protein B [Vibrio shilonii AK1]
Length = 211
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSL 63
+N ++ LL+ ++ L+K + ++ L KW+K NL S ED ++H+ DS+
Sbjct: 3 NNLTVKLEQLLSETSLEVSELQKQQLVGYVQLLDKWNKAYNLTSVRRPEDMLVKHILDSI 62
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
V + H +ID+G+G G PGI +I + L++S K+ F++ VV +
Sbjct: 63 IVGE-HLEGERFIDVGTGPGLPGIPLAIMHPNRS---FTLLDSLGKRIRFIKQVVHE 115
>gi|290959010|ref|YP_003490192.1| glucose inhibited division protein [Streptomyces scabiei 87.22]
gi|260648536|emb|CBG71647.1| glucose inhibited division protein [Streptomyces scabiei 87.22]
Length = 238
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 14/139 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI ++
Sbjct: 28 YAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVI 145
++ + L+E ++ +FL VV+ T RG R +E + V+
Sbjct: 88 VRQDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVLGTLQPVHVV 139
Query: 146 SARALADLDTLLEYSFPWL 164
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLAAWGIPLL 158
>gi|254375227|ref|ZP_04990707.1| glucose-inhibited cell division protein [Francisella novicida
GA99-3548]
gi|151572945|gb|EDN38599.1| glucose-inhibited cell division protein [Francisella novicida
GA99-3548]
Length = 205
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K N+ + +++ ++H+ DSL V + S +D+G+GGG PG++ +I
Sbjct: 33 LLEKWNKVYNITAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTGGGLPGVVLAILYP 91
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISARALAD 152
+ L++S KK FL+ V+K+ + + RI+ + D I +RA +
Sbjct: 92 QHQ---FTLVDSVGKKIMFLKN-VKKSLSLNNINPINTRIE---NLEGNFDNIISRAFSS 144
Query: 153 LDTLLE 158
+DT E
Sbjct: 145 VDTFYE 150
>gi|113461840|ref|YP_719909.1| 16S rRNA methyltransferase GidB [Haemophilus somnus 129PT]
gi|123327493|sp|Q0I5W5|RSMG_HAES1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112823883|gb|ABI25972.1| 16S rRNA m(7)G-527 methyltransferase [Haemophilus somnus 129PT]
Length = 212
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N +L+ LL T N+ +E L +L L KW+K NL S + ++H+ DS+ V
Sbjct: 5 NFLLKNTALLPT-NLQKERLVQL---VLLLNKWNKAYNLTSVRDPMEMLVKHILDSIVV- 59
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVN------LIESKNKKASFLRYVV 118
PY +I+ID+G+G G PG+ +I +N L++S K+ SF+R V
Sbjct: 60 --SPYLQGNIFIDVGTGPGLPGLPLAI---------INPDKKFFLLDSLGKRISFIRNAV 108
Query: 119 QKTAARG-KVFACRIQE-APQMITTCDVISARALADLDTLLEY 159
++ + R++E P D + +RA A L + E+
Sbjct: 109 RELELTNVEPVLSRVEEFKPD--HQFDGVLSRAFASLKDMTEW 149
>gi|145628868|ref|ZP_01784668.1| glucose-inhibited division protein B [Haemophilus influenzae
22.1-21]
gi|144979338|gb|EDJ89024.1| glucose-inhibited division protein B [Haemophilus influenzae
22.1-21]
Length = 184
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ + E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVIPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 130 EDKFDGVLSRAFASLKDMTDW 150
>gi|170718146|ref|YP_001785175.1| 16S rRNA methyltransferase GidB [Haemophilus somnus 2336]
gi|168826275|gb|ACA31646.1| methyltransferase GidB [Haemophilus somnus 2336]
Length = 220
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N +L+ LL T N+ +E L +L L KW+K NL S + ++H+ DS+ V
Sbjct: 13 NFLLKNTALLPT-NLQKERLVQL---VLLLNKWNKAYNLTSVRDPMEMLVKHILDSIVV- 67
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVN------LIESKNKKASFLRYVV 118
PY +I+ID+G+G G PG+ +I +N L++S K+ SF+R V
Sbjct: 68 --SPYLQGNIFIDVGTGPGLPGLPLAI---------INPDKKFFLLDSLGKRISFIRNAV 116
Query: 119 QKTAARG-KVFACRIQE-APQMITTCDVISARALADLDTLLEY 159
++ + R++E P D + +RA A L + E+
Sbjct: 117 RELELTNVEPVLSRVEEFKPD--HQFDGVLSRAFASLKDMTEW 157
>gi|254515877|ref|ZP_05127937.1| methyltransferase GidB [gamma proteobacterium NOR5-3]
gi|219675599|gb|EED31965.1| methyltransferase GidB [gamma proteobacterium NOR5-3]
Length = 212
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W+K NL + RH+ DSL V+ H ID+G+G G PGI +I L ++
Sbjct: 34 RWNKTYNLTAVRDERAMVTRHLLDSLAVYP-HLQGQRLIDVGTGAGLPGIPLAIALPNLH 92
Query: 98 GGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE-APQMITTCDVISARALADLDT 155
L++S KK FL + V + + V R+ + P DV+ +RA A L
Sbjct: 93 ---FTLLDSNGKKTRFLVHAVSELGLSNVDVVKSRVSDYVPAQ--GFDVVLSRAFASLGD 147
Query: 156 LL 157
++
Sbjct: 148 MI 149
>gi|187918051|ref|YP_001883614.1| methyltransferase GidB [Borrelia hermsii DAH]
gi|238689280|sp|B2RZN8|RSMG_BORHD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119860899|gb|AAX16694.1| methyltransferase GidB [Borrelia hermsii DAH]
Length = 207
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQL--HPYPSIWIDLGS 80
E+++KL+++ L + + NLVS + + D + H DS+ F + P +D+GS
Sbjct: 19 ESIDKLKFYIKRVLLFGSRFNLVSKNDLRFDAVLLHALDSVVGFPIIKDNNPHQVLDVGS 78
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
G GFPGII +I +S + L+E NKK +FLR
Sbjct: 79 GAGFPGIILAIFDNSRK---YVLLERSNKKVTFLR 110
>gi|16762453|ref|NP_458070.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143941|ref|NP_807283.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56415741|ref|YP_152816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62182356|ref|YP_218773.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161616996|ref|YP_001590961.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167994880|ref|ZP_02575970.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168245183|ref|ZP_02670115.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168823140|ref|ZP_02835140.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194443339|ref|YP_002043121.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448458|ref|YP_002047904.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261829|ref|ZP_03161903.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197364669|ref|YP_002144306.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198243877|ref|YP_002217821.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200388761|ref|ZP_03215373.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|213052662|ref|ZP_03345540.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213649866|ref|ZP_03379919.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850448|ref|ZP_03381346.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|308065943|ref|NP_462772.3| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|54037193|sp|P64238|RSMG_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54041309|sp|P64237|RSMG_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75479636|sp|Q57HX0|RSMG_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81599662|sp|Q5PJX2|RSMG_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040821|sp|A9MXB7|RSMG_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797831|sp|B5FN43|RSMG_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238690239|sp|B4TAY2|RSMG_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238690765|sp|B5BIP4|RSMG_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238693555|sp|B4SYE1|RSMG_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|25300022|pir||AF0953 glucose inhibited division protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16422447|gb|AAL22731.1| associated with glucose-inhibited division [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16504758|emb|CAD03122.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139577|gb|AAO71143.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56129998|gb|AAV79504.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129989|gb|AAX67692.1| associate with glucose-inhibited division [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161366360|gb|ABX70128.1| hypothetical protein SPAB_04817 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402002|gb|ACF62224.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406762|gb|ACF66981.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197096146|emb|CAR61742.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197240084|gb|EDY22704.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197938393|gb|ACH75726.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199605859|gb|EDZ04404.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205327328|gb|EDZ14092.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205336052|gb|EDZ22816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205340562|gb|EDZ27326.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|261249012|emb|CBG26870.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|312915004|dbj|BAJ38978.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321222171|gb|EFX47244.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322716850|gb|EFZ08421.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|326625608|gb|EGE31953.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|332990722|gb|AEF09705.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 207
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 87 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 143 SLNDMVSW 150
>gi|327485242|gb|AEA79649.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio cholerae LMA3894-4]
Length = 210
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID+G+
Sbjct: 19 VTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFIDVGT 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
G G PGI +I E L++S K+ FL+ V+
Sbjct: 78 GPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIH 113
>gi|326336195|ref|ZP_08202367.1| glucose inhibited division protein B [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691704|gb|EGD33671.1| glucose inhibited division protein B [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 203
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQ 92
L+ W+ +IN++S +E F + H+ SL + ++ + S +D+G+GGGFPGI +I
Sbjct: 25 LYKDWNTRINVISRKDMEHFVLHHLLHSLGIAKICSFESGIKVLDVGTGGGFPGIPLAIL 84
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARAL 150
+ LV+ I K K VVQ+ A + Q+ + D I +RA+
Sbjct: 85 YPEVSFHLVDSIGKKIK-------VVQEVANALSLTNVTYQQVRVETLEGQYDYIVSRAV 137
Query: 151 ADLD 154
+D
Sbjct: 138 TQMD 141
>gi|303235753|ref|ZP_07322360.1| 16S rRNA methyltransferase GidB [Prevotella disiens FB035-09AN]
gi|302484200|gb|EFL47188.1| 16S rRNA methyltransferase GidB [Prevotella disiens FB035-09AN]
Length = 208
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ + E+ Y L++ W+ KIN++S +E+ + HV SL + + + + +D
Sbjct: 12 LTNKQQEQFAALYDLYVDWNSKINVISRKDIENLYEHHVLHSLAIAKFINFQDDTNVLDF 71
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I + LI+ KK V + + E +
Sbjct: 72 GTGGGFPGIPLAIMFPNAN---FKLIDGTGKKIKVANEVANAIGLENVLPQHKRGEEEK- 127
Query: 139 ITTCDVISARALADLDTLL 157
D I +RA+ L L+
Sbjct: 128 -GKFDFIVSRAVMPLPDLM 145
>gi|255020231|ref|ZP_05292300.1| Ribosomal RNA small subunit methyltransferase G [Acidithiobacillus
caldus ATCC 51756]
gi|254970373|gb|EET27866.1| Ribosomal RNA small subunit methyltransferase G [Acidithiobacillus
caldus ATCC 51756]
Length = 215
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+Y L +W++ NL + +H+ DSL + P + +D+GSG G PG+
Sbjct: 35 LDYLAQLQ-RWNRSHNLTAIRDPHAMVAQHLLDSLALLPHLPD-GLLLDVGSGAGLPGVP 92
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ--EAPQMITTCDVI 145
+I S + LIE KKA+FLR+V + R V A R++ P+
Sbjct: 93 LAIVRSGQD---FVLIEPNAKKAAFLRHVHRHLGLVRVVVHAGRVENYRPPEPAAAVLSR 149
Query: 146 SARALADLDTLLEY 159
+ +LA LD + ++
Sbjct: 150 ATASLARLDAMTQH 163
>gi|12045241|ref|NP_073052.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|255660406|ref|ZP_05405815.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|1346132|sp|P47620|RSMG_MYCGE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|3844968|gb|AAC71607.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|166078794|gb|ABY79412.1| methyltransferase GidB [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 192
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID-----LGSGGGF 84
E + L + +K NL T E + V + L +F+ Y +ID LGSG G
Sbjct: 7 EKYVDLVFEANKNFNLTGFKTKEAIYQNLVIEILTLFK--GYEKFFIDKTVADLGSGNGS 64
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PGII + I+ LV LI+SK+KK SFL + ++ V C E + DV
Sbjct: 65 PGIILKLLFQKIK-KLV-LIDSKHKKISFLNKLTKQLNLEKTVAICERIEVHK--NHYDV 120
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
I +R L+ + + + +F L K
Sbjct: 121 ICSRGLSTIIKVNDLAFSLLNSK 143
>gi|189045877|sp|B0UWH2|RSMG_HAES2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 28/163 (17%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N +L+ LL T N+ +E L +L L KW+K NL S + ++H+ DS+ V
Sbjct: 5 NFLLKNTALLPT-NLQKERLVQL---VLLLNKWNKAYNLTSVRDPMEMLVKHILDSIVV- 59
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVN------LIESKNKKASFLRYVV 118
PY +I+ID+G+G G PG+ +I +N L++S K+ SF+R V
Sbjct: 60 --SPYLQGNIFIDVGTGPGLPGLPLAI---------INPDKKFFLLDSLGKRISFIRNAV 108
Query: 119 QKTAARG-KVFACRIQE-APQMITTCDVISARALADLDTLLEY 159
++ + R++E P D + +RA A L + E+
Sbjct: 109 RELELTNVEPVLSRVEEFKPD--HQFDGVLSRAFASLKDMTEW 149
>gi|289826267|ref|ZP_06545379.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
Length = 207
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 32 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 88
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 89 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 144
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 145 SLNDMVSW 152
>gi|207859096|ref|YP_002245747.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213026622|ref|ZP_03341069.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
gi|213579758|ref|ZP_03361584.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|224585668|ref|YP_002639467.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|206710899|emb|CAR35263.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224470196|gb|ACN48026.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|267996161|gb|ACY91046.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160405|emb|CBW19931.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|320088298|emb|CBY98059.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|323132235|gb|ADX19665.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
Length = 209
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 32 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 88
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 89 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 144
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 145 SLNDMVSW 152
>gi|328471204|gb|EGF42106.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus 10329]
Length = 211
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VS + E+L + L KW+K NL S + ++H+ DS+ V H +ID+G
Sbjct: 18 DVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVGTHLQGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I L++S K+ F++ VV + R++E Q
Sbjct: 77 TGPGLPGIPLAIMHPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTPIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDGVLSRAFASMTDMVEW 153
>gi|204928642|ref|ZP_03219841.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204322075|gb|EDZ07273.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322630216|gb|EFY26987.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|323200495|gb|EFZ85573.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323219999|gb|EGA04469.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323262377|gb|EGA45935.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
Length = 207
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 87 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 143 SLNDMVSW 150
>gi|157363104|ref|YP_001469871.1| methyltransferase GidB [Thermotoga lettingae TMO]
gi|189040727|sp|A8F3S3|RSMG_THELT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157313708|gb|ABV32807.1| methyltransferase GidB [Thermotoga lettingae TMO]
Length = 225
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EKL+ + L + S INL S E +H+ D VF + +D+G+GGG PG
Sbjct: 21 EKLDSYIDLLI--SAPINLTSLRDKEYAIHKHIVDI--VFPVKMLTGKLLDVGTGGGIPG 76
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAP-QMITTCDV 144
+I +I L I LV ES KK +L ++ C R ++ P + D+
Sbjct: 77 LILAI-LFPINATLV---ESVRKKVMWLEKILNMLNIGNVNLLCSRAEKLPADKKESFDI 132
Query: 145 ISARALADLDTLLEYSFPW 163
++ARA+++L LLE P+
Sbjct: 133 VTARAVSELRILLELCAPF 151
>gi|229530213|ref|ZP_04419602.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
12129(1)]
gi|229332346|gb|EEN97833.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
12129(1)]
Length = 210
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ V+ + E+L + L KW+K NL S + ++H+ DSL V H +ID
Sbjct: 16 SLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPHLVGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+G+G G PGI ++ E L++S K+ FL+ V+
Sbjct: 75 VGTGPGLPGIPLAVMHPDKE---FVLLDSLGKRIRFLKQVIH 113
>gi|213418554|ref|ZP_03351620.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 196
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 19 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 75
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 76 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 131
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 132 SLNDMVSW 139
>gi|318042306|ref|ZP_07974262.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CB0101]
Length = 249
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSL-----RVFQLHPYPSIWIDLGSGGGFPGIITSIQL 93
W+ ++NL +DFWI V DSL R+ + P ID+G+GGGFPG+ ++
Sbjct: 36 WNGRVNLTRLVEGDDFWIAQVFDSLWPLQQRLQEQAEAPLRCIDVGTGGGFPGLAIAVAF 95
Query: 94 SSIEGGLVNLIESKNK 109
+ LV+ + K +
Sbjct: 96 PQAQLTLVDSVGRKTQ 111
>gi|262341120|ref|YP_003283975.1| glucose-inhibited division protein B [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272457|gb|ACY40365.1| glucose-inhibited division protein B [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 206
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLG 79
+ L KL L+ W+ +NL+S T DF +H+ L +VF P S +DLG
Sbjct: 13 NQQLYKLSSLKNLYAYWNTHVNLISRKTFYDFDQQHILFCLGIAKVFSFFP-GSCVMDLG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVN 102
+GGGFPGI SI E LV+
Sbjct: 72 TGGGFPGIPLSIVFPHTEFILVD 94
>gi|229816219|ref|ZP_04446529.1| hypothetical protein COLINT_03269 [Collinsella intestinalis DSM
13280]
gi|229808227|gb|EEP44019.1| hypothetical protein COLINT_03269 [Collinsella intestinalis DSM
13280]
Length = 257
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGG 82
ET E+ + ++ +NL + D I H+ DSL +++ P P ++D+G+G
Sbjct: 42 ETAERCVQHLLYVNQVNQVMNLTRIKDIHDALILHIVDSLALYRDLPIDPEHFLDMGTGA 101
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GFPGI ++ S G L++ + K + + G C A +M
Sbjct: 102 GFPGIPFAL-YSGCSGVLLDSVGKKIDAVNAFIDALGIEDVEGIHDRCE-SYAMKMRGRF 159
Query: 143 DVISARALADLDTLLEYSFPWL 164
D + ARA+ + ++EY P+L
Sbjct: 160 DTVFARAVGQMSMIIEYGTPFL 181
>gi|205354544|ref|YP_002228345.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205274325|emb|CAR39349.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326629679|gb|EGE36022.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 209
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 32 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 88
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 89 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 144
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 145 SLNDMVSW 152
>gi|220933186|ref|YP_002510094.1| methyltransferase GidB [Halothermothrix orenii H 168]
gi|219994496|gb|ACL71099.1| methyltransferase GidB [Halothermothrix orenii H 168]
Length = 240
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 33 YFLFLKW-SKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGSGGGFPGIITS 90
Y FLK +KK NL + ++ +H DSL + + +ID+G+G GFPG++
Sbjct: 32 YLKFLKEENKKYNLTALDEPDEIITKHFFDSLSFLSKFNLKQEKFIDIGTGAGFPGMVIK 91
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMI--TTCDVIS 146
I ++ + L++S K+ +FL+ + + + +V R ++ A I D +
Sbjct: 92 IFKPGLD---MILLDSLAKRVNFLKKLSTRLGLKKLEVVHARAEDLARDKIYREGFDWVV 148
Query: 147 ARALADLDTLLEYSFPWL 164
ARA+A ++TL EY+ P +
Sbjct: 149 ARAVAPVNTLSEYTLPLV 166
>gi|291297417|ref|YP_003508815.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
gi|290472376|gb|ADD29795.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
Length = 242
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGS 80
R L + F+ L ++ +NL + E +H DSL + + S ID+G+
Sbjct: 23 RPYLPQFALFFELLTTVNQNLNLTAIRDEEGIIYKHFADSLSCLRYAGFASGLSVIDVGT 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMI 139
G GFPG+ +I S I+ +L+++ KK F+ V Q A + R +E + +
Sbjct: 83 GAGFPGLPLAIVRSDIQ---FDLLDATKKKIEFVAKVAQTLALVNTQALWGRSEELGRQV 139
Query: 140 TTCDVISA---RALADLDTLLEYSFPWL 164
+ A RA+A L T E + P +
Sbjct: 140 VKRETYGAALTRAVASLATAAELTLPLV 167
>gi|153952100|ref|YP_001397922.1| methyltransferase GidB [Campylobacter jejuni subsp. doylei 269.97]
gi|166224578|sp|A7H342|RSMG_CAMJD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152939546|gb|ABS44287.1| methyltransferase GidB [Campylobacter jejuni subsp. doylei 269.97]
Length = 188
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L S +L E KK +FLR + ++ + ++ ++QE D
Sbjct: 75 PAVFLAFLLQSN----FHLFEPNPKKTAFLRTLKIECELSNLHIYKEKVQEYKNTF-KAD 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDIKPLLE 144
>gi|124268970|ref|YP_001022974.1| 16S rRNA methyltransferase GidB [Methylibium petroleiphilum PM1]
gi|166224598|sp|A2SMF0|RSMG_METPP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|124261745|gb|ABM96739.1| glucose inhibited division protein B [Methylibium petroleiphilum
PM1]
Length = 221
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 18/143 (12%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVF-----QLHPYPSIWIDLGSGGGFPGIITSIQ 92
+W++ NL + +H+ DSL V Q +D+GSG G PG+ ++
Sbjct: 43 RWNRVYNLTAVREPAQMLTQHLLDSLAVVAPLRRQTRATAIALLDVGSGAGLPGVAIAVA 102
Query: 93 LSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVISARA-- 149
I V+ +++ +KKASF+R V V+ + R++ + DVI++RA
Sbjct: 103 CPEIH---VSCVDTVSKKASFIRQVGVELGLTHFQALHARVESLAS--SNFDVITSRAFA 157
Query: 150 -LADLDTLLEYSFP----WLYQK 167
LAD TL E + W+ K
Sbjct: 158 SLADFVTLTEAALAPDGVWMAMK 180
>gi|238913126|ref|ZP_04656963.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|322617214|gb|EFY14119.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619098|gb|EFY15984.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625165|gb|EFY21993.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322634359|gb|EFY31093.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635243|gb|EFY31958.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642880|gb|EFY39465.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645084|gb|EFY41614.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650433|gb|EFY46845.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653625|gb|EFY49952.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661547|gb|EFY57770.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322661629|gb|EFY57848.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669791|gb|EFY65933.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671984|gb|EFY68103.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675005|gb|EFY71091.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683695|gb|EFY79708.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686082|gb|EFY82067.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192001|gb|EFZ77238.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323202724|gb|EFZ87761.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208301|gb|EFZ93242.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211736|gb|EFZ96569.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218598|gb|EGA03305.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323224770|gb|EGA09035.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323232522|gb|EGA16624.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235297|gb|EGA19382.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323241085|gb|EGA25122.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241366|gb|EGA25398.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248596|gb|EGA32526.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252105|gb|EGA35965.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258591|gb|EGA42254.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323268214|gb|EGA51690.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270628|gb|EGA54073.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 209
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 32 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 88
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 89 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 144
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 145 SLNDMVSW 152
>gi|296141902|ref|YP_003649145.1| methyltransferase GidB [Tsukamurella paurometabola DSM 20162]
gi|296030036|gb|ADG80806.1| methyltransferase GidB [Tsukamurella paurometabola DSM 20162]
Length = 239
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
EY + L + L+ V W RHV + + +L +D+GSG G PGI
Sbjct: 40 EYAHVLATDGVVR-GLIGPREVPRLWERHVLNCAVLGELVEAGETLVDVGSGAGLPGIPV 98
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I +E V L+E ++A FL +V R +E Q D +++
Sbjct: 99 AIARPDVE---VILVEPLLRRAVFLEEFCGPRLPNVRVVRGRAEERSVVQAAGGADAVTS 155
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA++ L +S P L +
Sbjct: 156 RAVSGFPKLAPWSAPLLRE 174
>gi|148825234|ref|YP_001289987.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae PittEE]
gi|229846574|ref|ZP_04466682.1| glucose-inhibited division protein B [Haemophilus influenzae
7P49H1]
gi|166224592|sp|A5UA03|RSMG_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148715394|gb|ABQ97604.1| glucose-inhibited division protein B [Haemophilus influenzae
PittEE]
gi|229810667|gb|EEP46385.1| glucose-inhibited division protein B [Haemophilus influenzae
7P49H1]
Length = 203
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNATPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEYSF 161
D + +RA A L + ++ +
Sbjct: 130 EDKFDGVLSRAFASLKDMTDWCY 152
>gi|116874155|ref|YP_850936.1| glucose-inhibited division protein B [Listeria welshimeri serovar
6b str. SLCC5334]
gi|123461489|sp|A0AMC5|RSMG_LISW6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116743033|emb|CAK22157.1| glucose-inhibited division protein B [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 238
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S +++ ++ + ++W++K+NL + + ++ +++H DS+ + SI D
Sbjct: 17 LSATQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISATFYVDFTSFDSIC-D 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I ++ V++++S K+ +FL + +K F A
Sbjct: 76 VGAGAGFPSIPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 133 QNKAHREKYDLVTARAVARMSVLAELCIPLV 163
>gi|28899853|ref|NP_799458.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus RIMD
2210633]
gi|153838483|ref|ZP_01991150.1| methyltransferase GidB [Vibrio parahaemolyticus AQ3810]
gi|260361981|ref|ZP_05774986.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus K5030]
gi|260876532|ref|ZP_05888887.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AN-5034]
gi|260897411|ref|ZP_05905907.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus Peru-466]
gi|260902396|ref|ZP_05910791.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AQ4037]
gi|31076671|sp|Q87K99|RSMG_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28808105|dbj|BAC61342.1| glucose inhibited division protein B [Vibrio parahaemolyticus RIMD
2210633]
gi|149748106|gb|EDM58965.1| methyltransferase GidB [Vibrio parahaemolyticus AQ3810]
gi|308087900|gb|EFO37595.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus Peru-466]
gi|308090351|gb|EFO40046.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AN-5034]
gi|308107140|gb|EFO44680.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AQ4037]
gi|308114160|gb|EFO51700.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus K5030]
Length = 211
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VS + E+L + L KW+K NL S + ++H+ DS+ V H +ID+G
Sbjct: 18 DVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVGTHLQGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I L++S K+ F++ VV + R++E Q
Sbjct: 77 TGPGLPGIPLAIMHPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTPIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDGVLSRAFASMTDMVEW 153
>gi|296273205|ref|YP_003655836.1| methyltransferase GidB [Arcobacter nitrofigilis DSM 7299]
gi|296097379|gb|ADG93329.1| methyltransferase GidB [Arcobacter nitrofigilis DSM 7299]
Length = 194
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI-RHVEDSLRVFQLHPYPSI 74
L N+ + L K E F W K NL S+ +ED I +++ DS+ V +
Sbjct: 6 LEELNLGEDFLPKCEEFKKTLQHWGKVHNL--SAELEDEKIEKNIYDSIYVLKFIKDYKT 63
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+G+G G+PG+I ++ +I+ LIE + K+ +FL ++ C E
Sbjct: 64 VADIGTGAGYPGLILAMARPNIK---FYLIEPRAKRVAFLNFIKNSLKLDNIEILCNRVE 120
Query: 135 APQMITTCDVISARALADLDTLLE 158
+ I D+I++RA+ + LL+
Sbjct: 121 YVKDI-KVDLITSRAVTNTSLLLD 143
>gi|213427462|ref|ZP_03360212.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 216
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 32 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 88
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 89 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 144
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 145 SLNDMVSW 152
>gi|238750332|ref|ZP_04611834.1| Ribosomal RNA small subunit methyltransferase G [Yersinia rohdei
ATCC 43380]
gi|238711565|gb|EEQ03781.1| Ribosomal RNA small subunit methyltransferase G [Yersinia rohdei
ATCC 43380]
Length = 214
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 22/159 (13%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LLN ++ +K + + L KW+K NL S +RH+ DS+ V
Sbjct: 12 KLDSLLNAAEITLPDQQKHQLIGYVELLHKWNKAYNLTSVRDPLQMLVRHILDSI-VVNP 70
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQK 120
H S +ID+G+G G PGI +I L++S K+ FLR V ++
Sbjct: 71 HLQGSRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRIRFLRQVQHELGLNNIEP 127
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+R + F + E P D + +RA A L +L +
Sbjct: 128 VQSRVEDF---VAEPP-----FDGVISRAFASLQDMLSW 158
>gi|145640462|ref|ZP_01796046.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|145275048|gb|EDK14910.1| glucose-inhibited division protein B [Haemophilus influenzae
22.4-21]
Length = 203
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTNVTPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 130 EDKFDGVLSRAFASLKDMTDW 150
>gi|313621875|gb|EFR92552.1| 16S rRNA methyltransferase GidB [Listeria innocua FSL J1-023]
Length = 238
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S + +++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHXXDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLAELCMPLV 163
>gi|264676174|ref|YP_003276080.1| methyltransferase GidB [Comamonas testosteroni CNB-2]
gi|262206686|gb|ACY30784.1| methyltransferase GidB [Comamonas testosteroni CNB-2]
Length = 220
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-------RVFQLHPYPS----I 74
++ L F L KW+K NL S ++ H+ DSL R P
Sbjct: 25 IDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPALLRHVNRLPLEEGKRLP 84
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR--I 132
+D+GSGGG PG++ +I I+ VN +++ KKA+F +Q+ AA ++ R
Sbjct: 85 LLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAF----IQQVAAALRLPNLRGIH 137
Query: 133 QEAPQMITTCDVISARALADL 153
+ T VIS RA A L
Sbjct: 138 DRVENLKTRYPVISCRAFASL 158
>gi|315178651|gb|ADT85565.1| glucose-inhibited division protein B [Vibrio furnissii NCTC 11218]
Length = 211
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VS E+L + L KW+K NL S D ++H+ DS+ V L +ID+G
Sbjct: 18 DVSERQCEQLVGYVELLNKWNKAYNLTSVRDTSDMLVKHIMDSIVVSPLL-VGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQM 138
+G G PGI +I + L++S K+ F++ V+ + R++E
Sbjct: 77 TGPGLPGIPLAIMNPTKS---FVLLDSLGKRIRFIKQVLHELNITNVTPVQSRVEEFDGG 133
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 134 EDGFDGVLSRAFASITDMVEW 154
>gi|319940688|ref|ZP_08015030.1| ribosomal RNA small subunit methyltransferase G [Sutterella
wadsworthensis 3_1_45B]
gi|319805839|gb|EFW02606.1| ribosomal RNA small subunit methyltransferase G [Sutterella
wadsworthensis 3_1_45B]
Length = 214
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF- 66
S+L A + + + L+ E + L LKW+K NL + E+ H+ DS +
Sbjct: 9 SVLTAGLTQLGLSSNLDVLKGFESYAELLLKWNKVYNLTAIRNPEEVLTHHLLDSATLVP 68
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P +D+G GGG P + ++ L + V +++ KKA+F+ +
Sbjct: 69 ALQRFVPGVDAVLDVGCGGGLPSVPLALLLPHLS---VTGVDAVGKKAAFVNQAAIELGL 125
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADL 153
+ R +M+ T I++RA A L
Sbjct: 126 KN--LTARHARVEKMVGTWKAITSRAFASL 153
>gi|323345433|ref|ZP_08085656.1| glucose inhibited division protein B [Prevotella oralis ATCC 33269]
gi|323093547|gb|EFZ36125.1| glucose inhibited division protein B [Prevotella oralis ATCC 33269]
Length = 208
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWID 77
N++ E + E L+ +W+ KIN++S ++ + HV SL + + + S +D
Sbjct: 12 NLTDEQQYQFEQLAPLYEEWNAKINVISRKDIDHLYEHHVLHSLAIAKEISFVSGTTVLD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+G+GGGFPGI +I + L++ I K K A+
Sbjct: 72 VGTGGGFPGIPLAILFPNCRFKLIDSIGKKVKVAA 106
>gi|238787870|ref|ZP_04631667.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
frederiksenii ATCC 33641]
gi|238724213|gb|EEQ15856.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
frederiksenii ATCC 33641]
Length = 209
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +K + + L KW+K NL S +RH+ DS+ V
Sbjct: 7 KLDSLLKAADIALPDQQKHQLIGYVELLHKWNKAYNLTSVRDPMQMLVRHILDSI-VVNP 65
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQK 120
H + +ID+G+G G PGI +I L++S K+ FLR V ++
Sbjct: 66 HLQGNRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLSNIEP 122
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+R + FA + D + +RA A L +L +
Sbjct: 123 VQSRVEDFAAK--------PPFDGVISRAFASLQDMLSW 153
>gi|224283946|ref|ZP_03647268.1| glucose-inhibited division protein B [Bifidobacterium bifidum NCIMB
41171]
gi|313141098|ref|ZP_07803291.1| methyltransferase gidB [Bifidobacterium bifidum NCIMB 41171]
gi|313133608|gb|EFR51225.1| methyltransferase gidB [Bifidobacterium bifidum NCIMB 41171]
Length = 232
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 21/167 (12%)
Query: 16 LNTYNVSRETL----EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------LRV 65
L+ + RETL +KLE F+ + + L+ + W RH+ +S +R
Sbjct: 14 LDDSAIVRETLGEAYDKLEVFHVKLSREGELRGLIGPRDISIIWERHILNSAACVPFIRE 73
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---- 121
D+GSGGGFPGI+ + + LIE ++ +L+ V
Sbjct: 74 VTDRSKAKTIADVGSGGGFPGIVAAACMPDC---AFTLIEPMERRVEWLQECVDDMDLQN 130
Query: 122 ----AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
AR RI+ + +++ RA+A + L ++ P L
Sbjct: 131 VTIIRARSDEVIDRIKHHEGELKPFSIVTCRAVAPMTKLAGWTLPLL 177
>gi|168464789|ref|ZP_02698681.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|195632297|gb|EDX50781.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
Length = 207
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVIS 146
L L++S K+ FLR V + T + +V A + E P D +
Sbjct: 87 LPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAY-LSEPP-----FDGVI 137
Query: 147 ARALADLDTLLEY 159
+RA A L+ ++ +
Sbjct: 138 SRAFASLNDMVSW 150
>gi|300362899|ref|ZP_07059069.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
gi|300352949|gb|EFJ68827.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
Length = 239
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQ 67
ANY + +S + E+ +Y ++++KK+NL + + +++H DS L
Sbjct: 11 ANY---GFKLSSKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSITPLLEFSD 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGK 126
L D+G+G GFP + I + + +++S K+ FL +V + +
Sbjct: 68 LFKGEKSLCDVGAGAGFPSLPIKILCPDLS---ITIVDSLGKRLKFLDELVSDLSLDKVT 124
Query: 127 VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+ R ++A Q + D+++ RA+A + L EY P
Sbjct: 125 LVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|145638597|ref|ZP_01794206.1| glucose-inhibited division protein B [Haemophilus influenzae
PittII]
gi|145272192|gb|EDK12100.1| glucose-inhibited division protein B [Haemophilus influenzae
PittII]
gi|309750098|gb|ADO80082.1| 16S rRNA 7-methylguanosine methyltransferase GidB [Haemophilus
influenzae R2866]
Length = 203
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S + +++L L KW+K NL S ++ ++H+ DSL V L+ +ID+G+
Sbjct: 16 ISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSL-VVSLYLQGDRFIDVGT 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PG+ +I S + L++S K+ SF+R +++ E Q
Sbjct: 75 GPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVTPVLSRVEEYQPED 131
Query: 141 TCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 132 KFDGVLSRAFASLKDMTDW 150
>gi|307152663|ref|YP_003888047.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
gi|306982891|gb|ADN14772.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
Length = 243
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 16/147 (10%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGGF 84
K + Y L ++++NL E+FW +H+ DSL L ID+G+G GF
Sbjct: 29 KFQRLYTEILLANRQLNLTRIIEPEEFWEKHLWDSLSGVVHLGLKTDNLSVIDIGTGAGF 88
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT---- 140
PG+ +I + G V L++S KK FL +V + E +MI
Sbjct: 89 PGVPVAI---AFPGWTVTLLDSVQKKMVFLNSLVSAMELENTSL---LTERVEMIAQDKK 142
Query: 141 ---TCDVISARALADLDTLLEYSFPWL 164
+ D+ RA+A EY+ P L
Sbjct: 143 YRESYDISLIRAVASASICAEYALPLL 169
>gi|238921735|ref|YP_002935250.1| 16S rRNA methyltransferase GidB [Edwardsiella ictaluri 93-146]
gi|259495494|sp|C5BF32|RSMG_EDWI9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238871304|gb|ACR71015.1| 16S rRNA methyltransferase GidB, putative [Edwardsiella ictaluri
93-146]
Length = 206
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGF 84
++L + L KW+K NL S D +RH+ DS+ V PY +ID+G+G G
Sbjct: 22 QRLLGYVSLLDKWNKAYNLTSVREPRDMLVRHIMDSIVV---SPYLQGLRFIDVGTGPGL 78
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAP 136
PGI +I L++S K+ FLR V ++ +R + F + E P
Sbjct: 79 PGIPLAIVRPDAN---FTLLDSLGKRVRFLRQVQHELRLDNIEPVQSRVEAF---VAEPP 132
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA A L ++ +
Sbjct: 133 -----FDGVISRAFASLQDMVSW 150
>gi|145634515|ref|ZP_01790224.1| glucose-inhibited division protein B [Haemophilus influenzae
PittAA]
gi|319897995|ref|YP_004136192.1| methyltransferase, sam-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3031]
gi|145268060|gb|EDK08055.1| glucose-inhibited division protein B [Haemophilus influenzae
PittAA]
gi|317433501|emb|CBY81884.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3031]
Length = 203
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTNVTPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 130 EDKFDGVLSRAFASLKDMTDW 150
>gi|153206162|ref|ZP_01945425.1| methyltransferase GidB [Coxiella burnetii 'MSU Goat Q177']
gi|212217718|ref|YP_002304505.1| 16S rRNA methyltransferase GidB [Coxiella burnetii CbuK_Q154]
gi|226796821|sp|B6J8V2|RSMG_COXB1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120577292|gb|EAX33916.1| methyltransferase GidB [Coxiella burnetii 'MSU Goat Q177']
gi|212011980|gb|ACJ19360.1| methyltransferase [Coxiella burnetii CbuK_Q154]
Length = 204
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 24 ETLEKLEYFYFLFL-KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGS 80
ET+++ + FL KW++ NL + + ++ H+ DSL + PY +D+GS
Sbjct: 18 ETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSIL---PYLKGDKILDVGS 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQE---AP 136
G GFPGI + + LI+SK KK +FL + A+R K+ IQE +
Sbjct: 75 GAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLL----QAASRFKITNVTIIQERVGSY 127
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I+ RAL + ++E +
Sbjct: 128 QPGFYFDTITCRALGSVREIMEQT 151
>gi|212211702|ref|YP_002302638.1| 16S rRNA methyltransferase GidB [Coxiella burnetii CbuG_Q212]
gi|226796822|sp|B6J2B9|RSMG_COXB2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|212010112|gb|ACJ17493.1| methyltransferase [Coxiella burnetii CbuG_Q212]
Length = 204
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 24 ETLEKLEYFYFLFL-KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGS 80
ET+++ + FL KW++ NL + + ++ H+ DSL + PY +D+GS
Sbjct: 18 ETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSIL---PYLKGDKILDVGS 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQE---AP 136
G GFPGI + + LI+SK KK +FL + A+R K+ IQE +
Sbjct: 75 GAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLL----QAASRFKITNVTIIQERVGSY 127
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I+ RAL + ++E +
Sbjct: 128 QPGFYFDTITCRALGSVREIMEQT 151
>gi|168263228|ref|ZP_02685201.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205348134|gb|EDZ34765.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 207
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I
Sbjct: 30 MLHKWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L L++S K+ FLR V + R++ P VIS RA A
Sbjct: 87 LPD---AYFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLLEY 159
L+ ++ +
Sbjct: 143 SLNDMVSW 150
>gi|15643470|ref|NP_228516.1| glucose-inhibited division protein B [Thermotoga maritima MSB8]
gi|7387702|sp|Q9WZG6|RSMG_THEMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|4981231|gb|AAD35789.1|AE001742_4 glucose-inhibited division protein B [Thermotoga maritima MSB8]
Length = 238
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 17/98 (17%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGK 126
+D+GSG G PG+I +I S ++ V L++S+ K +FLR V++K R +
Sbjct: 76 LLDVGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLENVSVVKERAE 132
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
F+ +E D ++ARA+A L+ L+E P L
Sbjct: 133 NFSKERRE------EFDYVTARAVARLNVLVEICTPAL 164
>gi|165918741|ref|ZP_02218827.1| methyltransferase GidB [Coxiella burnetii RSA 334]
gi|165917569|gb|EDR36173.1| methyltransferase GidB [Coxiella burnetii RSA 334]
Length = 204
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 24 ETLEKLEYFYFLFL-KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGS 80
ET+++ + FL KW++ NL + + ++ H+ DSL + PY +D+GS
Sbjct: 18 ETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSIL---PYLKGDKILDVGS 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQE---AP 136
G GFPGI + + LI+SK KK +FL + A+R K+ IQE +
Sbjct: 75 GAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLL----QAASRFKITNVTIIQERVGSY 127
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I+ RAL + ++E +
Sbjct: 128 QPGFYFDTITCRALGSVREIMEQT 151
>gi|29655210|ref|NP_820902.1| 16S rRNA methyltransferase GidB [Coxiella burnetii RSA 493]
gi|161829865|ref|YP_001597740.1| 16S rRNA methyltransferase GidB [Coxiella burnetii RSA 331]
gi|3122151|sp|P94614|RSMG_COXBU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|189039501|sp|A9NBA9|RSMG_COXBR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1780761|emb|CAA71460.1| unnamed protein product [Coxiella burnetii]
gi|29542482|gb|AAO91416.1| methyltransferase [Coxiella burnetii RSA 493]
gi|161761732|gb|ABX77374.1| methyltransferase GidB [Coxiella burnetii RSA 331]
Length = 204
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 24 ETLEKLEYFYFLFL-KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGS 80
ET+++ + FL KW++ NL + + ++ H+ DSL + PY +D+GS
Sbjct: 18 ETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSIL---PYLKGDKILDVGS 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQE---AP 136
G GFPGI + + LI+SK KK +FL + A+R K+ IQE +
Sbjct: 75 GAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLL----QAASRFKITNVTIIQERVGSY 127
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I+ RAL + ++E +
Sbjct: 128 QPGFYFDTITCRALGSVREIMEQT 151
>gi|315284177|ref|ZP_07872085.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
gi|313612177|gb|EFR86411.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
Length = 238
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + SI D
Sbjct: 17 LSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFESIC-D 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQ 133
+G+G GFP I I ++ V++++S K+ +FL + +K F A
Sbjct: 76 VGAGAGFPSIPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFG 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D ++ARA+A + L E P +
Sbjct: 133 QNKAHREKYDFVTARAVARMSVLSELCMPLV 163
>gi|318058976|ref|ZP_07977699.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SA3_actG]
gi|318077330|ref|ZP_07984662.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SA3_actF]
gi|333025725|ref|ZP_08453789.1| putative 16S rRNA methyltransferase GidB [Streptomyces sp. Tu6071]
gi|332745577|gb|EGJ76018.1| putative 16S rRNA methyltransferase GidB [Streptomyces sp. Tu6071]
Length = 239
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ ++ + L
Sbjct: 40 GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRRDLK---ITL 96
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL VV+ T RG R +E + V++ARA+A LD L
Sbjct: 97 LEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVLGTLQPVHVVTARAVAPLDRLA 151
Query: 158 EYSFPWL 164
+ P L
Sbjct: 152 GWGVPLL 158
>gi|46908989|ref|YP_015378.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes serotype 4b
str. F2365]
gi|55976451|sp|Q71VW1|RSMG_LISMF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46882262|gb|AAT05555.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 4b str. F2365]
Length = 238
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I +E V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLE---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|238853720|ref|ZP_04644087.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
gi|238833656|gb|EEQ25926.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
Length = 239
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQ 67
ANY + +S + E+ +Y ++++KK+NL + + +++H DS L
Sbjct: 11 ANY---GFKLSSKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSITPLLEFSD 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGK 126
L D+G+G GFP + I + + +++S K+ FL +V + +
Sbjct: 68 LFKGEKSLCDVGAGAGFPSLPIKILCPDLS---ITIVDSLGKRLKFLDELVSDLSLDKVT 124
Query: 127 VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+ R ++A Q + D+++ RA+A + L EY P
Sbjct: 125 LVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|294638359|ref|ZP_06716612.1| 16S rRNA methyltransferase GidB [Edwardsiella tarda ATCC 23685]
gi|291088612|gb|EFE21173.1| 16S rRNA methyltransferase GidB [Edwardsiella tarda ATCC 23685]
Length = 206
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 20/139 (14%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S + +RH+ DS+ V H +ID+G+G G PG
Sbjct: 22 QQLLAYVELLDKWNKAYNLTSVRDPREMLVRHIMDSI-VVSPHLQGQRFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQM 138
I +I L++S K+ FLR V ++ +R + F + E P
Sbjct: 81 IPLAIVRPESH---FTLLDSLGKRVRFLRQVQHALQLNNIEPVQSRVESF---VAEPP-- 132
Query: 139 ITTCDVISARALADLDTLL 157
D + +RA A L +L
Sbjct: 133 ---FDGVISRAFASLQDML 148
>gi|261250649|ref|ZP_05943224.1| ribosomal RNA small subunit methyltransferase G [Vibrio orientalis
CIP 102891]
gi|260939218|gb|EEX95205.1| ribosomal RNA small subunit methyltransferase G [Vibrio orientalis
CIP 102891]
Length = 210
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS E+L + + KW+K NL S ++ ++H+ DS+ + H +ID+G+
Sbjct: 19 VSSHQREQLVGYVEMLNKWNKAYNLTSVRDPQEMLVKHIMDSI-IVSTHLQGERFIDVGT 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
G G PGI +I + + L++S K+ F++ V+ + R++E Q
Sbjct: 78 GPGLPGIPLAIMNPTKQ---FCLLDSLGKRIRFIKQVLHELKIDNVNPIQSRVEEY-QPE 133
Query: 140 TTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 134 DKFDGVLSRAFASITDMVEW 153
>gi|260911194|ref|ZP_05917797.1| glucose-inhibited division protein B [Prevotella sp. oral taxon 472
str. F0295]
gi|260634674|gb|EEX52761.1| glucose-inhibited division protein B [Prevotella sp. oral taxon 472
str. F0295]
Length = 215
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
N++ E ++L L+ W++KIN+VS +++ ++ HV SL + + + + +D
Sbjct: 19 NLTAEQQDQLIKLGELYRMWNEKINVVSRKDIDNLYLHHVLHSLAIAKYVQFKAGTRVLD 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
G+GGGFPGI +I + L++ K
Sbjct: 79 FGTGGGFPGIPLAIVFPECQFKLIDRTAKK 108
>gi|323492999|ref|ZP_08098135.1| 16S rRNA methyltransferase GidB [Vibrio brasiliensis LMG 20546]
gi|323312735|gb|EGA65863.1| 16S rRNA methyltransferase GidB [Vibrio brasiliensis LMG 20546]
Length = 210
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ VS + +L + + KW+K NL S ++ ++H+ DS+ V H +I
Sbjct: 15 TSLEVSDQQRSQLVGYVEMLDKWNKAYNLTSVRDPQEMLVKHIMDSI-VVSTHLQGESFI 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE- 134
D+G+G G PGI SI + L++S K+ F++ V+ + R++E
Sbjct: 74 DVGTGPGLPGIPLSIMNPDKQ---FVLLDSLGKRIRFIKQVLHELKIENVTPVQSRVEEY 130
Query: 135 APQMITTCDVISARALADLDTLLEY 159
P+ D + +RA A + ++E+
Sbjct: 131 LPE--DKFDAVLSRAFASMTDMVEW 153
>gi|295837763|ref|ZP_06824696.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB74]
gi|197698919|gb|EDY45852.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB74]
Length = 239
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ ++ + L
Sbjct: 40 GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRRDLK---ITL 96
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL VV+ T RG R +E + V++ARA+A LD L
Sbjct: 97 LEPLLRRTNFLSEVVELLGLDHVTVVRG-----RAEEVLGTLQPVHVVTARAVAPLDRLA 151
Query: 158 EYSFPWL 164
+ P L
Sbjct: 152 GWGVPLL 158
>gi|148269368|ref|YP_001243828.1| methyltransferase GidB [Thermotoga petrophila RKU-1]
gi|166224627|sp|A5IJ79|RSMG_THEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147734912|gb|ABQ46252.1| methyltransferase GidB [Thermotoga petrophila RKU-1]
Length = 228
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 17/98 (17%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGK 126
+D+GSG G PG+I +I S ++ V L++S+ K +FLR V++K R +
Sbjct: 66 LLDVGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLENVSVVKERAE 122
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
F+ +E D ++ARA+A L+ L+E P L
Sbjct: 123 NFSKERRE------EFDYVTARAVARLNVLVEICTPAL 154
>gi|117620993|ref|YP_858689.1| 16S rRNA methyltransferase GidB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166224342|sp|A0KQY8|RSMG_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117562400|gb|ABK39348.1| methyltransferase GidB [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 214
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S + ++H+ DSL V Q H + +ID+G+G G PG+ +I
Sbjct: 30 LLHKWNKAYNLTSVRDPDAMLVKHILDSLVVSQ-HLHGERFIDVGTGPGLPGLPLAIINP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVISARALADL 153
+ L++S K+ +F+R V+ + R++E Q D + +RA A L
Sbjct: 89 DKQ---FVLLDSLGKRINFIRQVILELGLTNVTPVKSRVEEY-QPEVGFDGVLSRAFASL 144
Query: 154 DTLLEY 159
+ +L +
Sbjct: 145 EDMLSW 150
>gi|89092257|ref|ZP_01165211.1| Glucose inhibited division protein [Oceanospirillum sp. MED92]
gi|89083345|gb|EAR62563.1| Glucose inhibited division protein [Oceanospirillum sp. MED92]
Length = 212
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S +++L + L +KW+K NL + + RH+ DSL V I ID+GS
Sbjct: 24 LSEHQIDQLIRYLNLLIKWNKAYNLTAVRNPMEMIDRHLIDSLSVVPFIEGKRI-IDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PGI +I + V ++S KK F + +G++ + + +
Sbjct: 83 GPGLPGIPLAICYPELP---VTTLDSNGKKTRF------QLQVKGELGLNNLTVVNERVE 133
Query: 141 TC-----DVISARALADLDTLLEYSFPWLYQK 167
C D + +RA A L+ ++ ++ +Q+
Sbjct: 134 NCNFEPFDQVISRAFASLEDMINWTQQLCHQE 165
>gi|86150497|ref|ZP_01068722.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596347|ref|ZP_01099584.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 84-25]
gi|218562613|ref|YP_002344392.1| putative methyltransferase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|20177911|sp|Q9PNU3|RSMG_CAMJE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85839092|gb|EAQ56356.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191188|gb|EAQ95160.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360319|emb|CAL35115.1| putative methyltransferase (GidB homolog) [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|284926227|gb|ADC28579.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni IA3902]
gi|315928356|gb|EFV07671.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930919|gb|EFV09900.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 305]
Length = 188
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
EK++ + L K+++ NL +++ ++ DS+++ + + D+GSG GF
Sbjct: 19 EKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILDFYDFSKAKNIADIGSGAGF 74
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCD 143
P + + L S +L E KKA+FLR + ++ ++ ++QE D
Sbjct: 75 PVVFLAFLLQSN----FHLFEPNPKKAAFLRTLKIECELPNLHIYKEKVQEYKNTFKA-D 129
Query: 144 VISARALADLDTLLE 158
+I++RAL D+ LLE
Sbjct: 130 IITSRALMDVKPLLE 144
>gi|157964061|ref|YP_001504095.1| 16S rRNA methyltransferase GidB [Shewanella pealeana ATCC 700345]
gi|189040717|sp|A8HAH3|RSMG_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157849061|gb|ABV89560.1| methyltransferase GidB [Shewanella pealeana ATCC 700345]
Length = 207
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L F + KW+K NL S E IRH+ DSL V H S +ID+G+G G PG
Sbjct: 23 KQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDSL-VVSPHLKGSRFIDVGTGPGLPG 81
Query: 87 IITSI 91
I +I
Sbjct: 82 IPLAI 86
>gi|260771037|ref|ZP_05879965.1| ribosomal RNA small subunit methyltransferase G [Vibrio furnissii
CIP 102972]
gi|260613926|gb|EEX39117.1| ribosomal RNA small subunit methyltransferase G [Vibrio furnissii
CIP 102972]
Length = 211
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VS E+L + L KW+K NL S D ++H+ DS+ V L +ID+G
Sbjct: 18 DVSERQREQLVGYVELLNKWNKAYNLTSVRDTSDMLVKHIMDSIVVSPLL-VGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQM 138
+G G PGI +I + L++S K+ F++ V+ + R++E
Sbjct: 77 TGPGLPGIPLAIMNPTKS---FVLLDSLGKRIRFIKQVLHELNITNVTPVQSRVEEFDGG 133
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 134 EDGFDGVLSRAFASITDMVEW 154
>gi|281411935|ref|YP_003346014.1| methyltransferase GidB [Thermotoga naphthophila RKU-10]
gi|281373038|gb|ADA66600.1| methyltransferase GidB [Thermotoga naphthophila RKU-10]
Length = 228
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 17/98 (17%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGK 126
+D+GSG G PG+I +I S ++ V L++S+ K +FLR V++K R +
Sbjct: 66 LLDVGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLENVSVVKERAE 122
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
F+ +E D ++ARA+A L+ L+E P L
Sbjct: 123 NFSRERRE------EFDYVTARAVARLNVLVEICTPAL 154
>gi|330447282|ref|ZP_08310932.1| methyltransferase GidB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491473|dbj|GAA05429.1| methyltransferase GidB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 206
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V+ + L++L + L KW+K NL S + ++H+ DS+ V + + +ID+G
Sbjct: 15 QVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-VVSKYLGGTNYIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+G G PGI +I L++S K+ F+R V+ +
Sbjct: 74 TGPGLPGIPLAIMCPDKS---FTLLDSLGKRIRFIRQVIHE 111
>gi|269962682|ref|ZP_06177027.1| Glucose inhibited division protein [Vibrio harveyi 1DA3]
gi|269832605|gb|EEZ86719.1| Glucose inhibited division protein [Vibrio harveyi 1DA3]
Length = 211
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VS + E+L + L KW+K NL S + ++H+ DS+ V H +ID+G
Sbjct: 18 EVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVSTHLPGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G G PGI +I L++S K+ F++ VV + R++E Q
Sbjct: 77 TGPGLPGIPLAIMNPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTAIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDGVLSRAFASMTDMVEW 153
>gi|312794884|ref|YP_004027806.1| methyltransferase gidB [Burkholderia rhizoxinica HKI 454]
gi|312166659|emb|CBW73662.1| Methyltransferase gidB (EC 2.1.-.-) [Burkholderia rhizoxinica HKI
454]
Length = 236
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+LR +S E + L + L KW+ NL + I+H+ DSL +
Sbjct: 26 LLRGGATELGVPLSEEQIGGLLDYVGLLTKWNAVYNLTAIREPRQMVIQHLLDSLAIV-- 83
Query: 69 HPY-----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK---NKKASFLRYVVQK 120
PY P+ +D+GSGGG PGI+ ++ + S + +++ K ++A +
Sbjct: 84 -PYIASRSPASLLDVGSGGGLPGIVIALAMPSCDVVTNDIVHKKTAFQQQAKGCLRLSNL 142
Query: 121 TAARGKVFACRIQ-EAPQMITTCDVISARALADL 153
+ G+V A R + + P D I +RA A+L
Sbjct: 143 SIVTGRVQALRAEIDVP---VRFDAIVSRAFAEL 173
>gi|73663751|ref|YP_302532.1| 16S rRNA methyltransferase GidB [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123641435|sp|Q49UI6|RSMG_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|72496266|dbj|BAE19587.1| glucose inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 239
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWI-DLGSGGGFPGIITSIQ 92
+ ++W++K+NL S + + +++H DS+ F + I D+G+G GFP I I
Sbjct: 31 MLVEWNEKMNLTSITEEHEVYLKHFYDSIATSFYTDLTKELTICDVGAGAGFPSIPLKII 90
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA---PQMITTCDVISARA 149
+++ V +++S NK+ FL + + F E + D+++ARA
Sbjct: 91 FPNLK---VTIVDSLNKRIHFLNQLAEALELDNVSFVHDRAETYGKGDYRASYDIVTARA 147
Query: 150 LADLDTLLEYSFPWL 164
+A L L E P +
Sbjct: 148 VARLSVLSELCLPLV 162
>gi|311065161|ref|YP_003971887.1| methyltransferase GidB [Bifidobacterium bifidum PRL2010]
gi|310867481|gb|ADP36850.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum PRL2010]
Length = 232
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 21/167 (12%)
Query: 16 LNTYNVSRETL----EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------LRV 65
L+ + RE L +KLE F+ + + L+ + W RH+ +S +R
Sbjct: 14 LDDSAIVREALGEAYDKLEVFHVKLSREGELRGLIGPRDISIIWERHILNSAACVPFIRE 73
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---- 121
D+GSGGGFPGI+ + + + LIE ++ +L+ V
Sbjct: 74 VADRSKAKTIADVGSGGGFPGIVAATCMPDC---VFTLIEPMERRVEWLQECVDDMDLQN 130
Query: 122 ----AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
AR RI+ + V++ RA+A + L ++ P L
Sbjct: 131 VTIIRARSDEVIDRIKHHEGELKPFSVVTCRAVAPMTKLAGWTLPLL 177
>gi|302520507|ref|ZP_07272849.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB78]
gi|302429402|gb|EFL01218.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB78]
Length = 239
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ ++ + L
Sbjct: 40 GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRRDLK---ITL 96
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL VV+ T RG R +E + V++ARA+A LD L
Sbjct: 97 LEPLLRRTNFLTEVVELLGLDHVTVVRG-----RAEEVLGTLQPVHVVTARAVAPLDRLA 151
Query: 158 EYSFPWL 164
+ P L
Sbjct: 152 GWGVPLL 158
>gi|37785810|gb|AAR02617.1| GidB [Aeromonas hydrophila]
Length = 208
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S + ++H+ DSL V H + +ID+G+G G PG+ +I
Sbjct: 30 LLHKWNKAYNLTSVRDPDAMLVKHILDSL-VVSRHLHGERFIDVGTGPGLPGLPLAIINP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDVISARALADL 153
+ L++S K+ +F+R V+ + A R++E Q D + +RA A L
Sbjct: 89 DKQ---FVLLDSLGKRINFIRQVILELGLANVTPVKSRVEEY-QPEVGFDGVLSRAFASL 144
Query: 154 DTLL 157
+ +L
Sbjct: 145 EDML 148
>gi|291285164|ref|YP_003501982.1| Ribosomal RNA small subunit methyltransferase G [Escherichia coli
O55:H7 str. CB9615]
gi|290765037|gb|ADD58998.1| Ribosomal RNA small subunit methyltransferase G [Escherichia coli
O55:H7 str. CB9615]
Length = 207
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
+ KW+K N S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 30 MLHKWNKAYNPTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIV 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
L++S K+ FLR V + + R++E P VIS RA A
Sbjct: 87 RPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS-RAFA 142
Query: 152 DLDTLL 157
L+ ++
Sbjct: 143 SLNDMV 148
>gi|315305256|ref|ZP_07875212.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
gi|313626378|gb|EFR95555.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
Length = 238
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGG 82
L++ ++ + ++W++K+NL + + ++ +++H DS+ + SI D+G+G
Sbjct: 22 LKQFRDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFTEFRSIC-DVGAGA 80
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQM 138
GFP I I +E V++++S K+ +FL + +K F A +
Sbjct: 81 GFPSIPLKICFPHLE---VSIVDSLKKRMTFLEALAEKLVLTNVHFYHDRAETFGQNKAH 137
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
++++ARA+A + L E P +
Sbjct: 138 REKYNLVTARAVARMSVLSELCLPLV 163
>gi|314922664|gb|EFS86495.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL001PA1]
gi|314965748|gb|EFT09847.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL082PA2]
gi|314982891|gb|EFT26983.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA3]
gi|315091199|gb|EFT63175.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA4]
gi|315094430|gb|EFT66406.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL060PA1]
gi|315105150|gb|EFT77126.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA2]
gi|327328926|gb|EGE70686.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL103PA1]
Length = 211
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S+ + L P D+GSG G PGI +I +E + L
Sbjct: 39 GLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MIL 95
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
IE ++++FL + + +V R A DV+ +RA+A L TL+ ++
Sbjct: 96 IEPMLRRSNFLTEAIDELGLDDRVSVVR-GRAEDADLHVDVVVSRAVAKLATLINWT 151
>gi|156972767|ref|YP_001443674.1| glucose-inhibited division protein B [Vibrio harveyi ATCC BAA-1116]
gi|166224628|sp|A7N0X5|RSMG_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156524361|gb|ABU69447.1| hypothetical protein VIBHAR_00432 [Vibrio harveyi ATCC BAA-1116]
Length = 211
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VS + E+L + L KW+K NL S + ++H+ DS+ V H +ID+G
Sbjct: 18 EVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVSTHLPGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G G PGI +I L++S K+ F++ VV + R++E Q
Sbjct: 77 TGPGLPGIPLAIMNPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTAIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDGVLSRAFASMTDMVEW 153
>gi|167626209|ref|YP_001676503.1| 16S rRNA methyltransferase GidB [Shewanella halifaxensis HAW-EB4]
gi|189040824|sp|B0TQG4|RSMG_SHEHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167356231|gb|ABZ78844.1| methyltransferase GidB [Shewanella halifaxensis HAW-EB4]
Length = 207
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ + ++L F + KW+K NL S E IRH+ DSL V H S +ID+G+G
Sbjct: 18 TEQQKKQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDSL-VVSPHLKGSRFIDVGTG 76
Query: 82 GGFPGIITSI 91
G PGI +I
Sbjct: 77 PGLPGIPLAI 86
>gi|82703882|ref|YP_413448.1| methyltransferase GidB [Nitrosospira multiformis ATCC 25196]
gi|123543763|sp|Q2Y5B5|RSMG_NITMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82411947|gb|ABB76056.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosospira multiformis ATCC
25196]
Length = 216
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L KW++ NL + E HV DSL V H S D+GSG G PGI
Sbjct: 25 RLLQYLALIQKWNRVHNLTAVREPEAMLALHVLDSLAVLP-HIGGSRIADVGSGAGLPGI 83
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ L+ E +V L+ES +KKA+FL+
Sbjct: 84 --PVALARPEWRVV-LVESNHKKAAFLQ 108
>gi|27364444|ref|NP_759972.1| 16S rRNA methyltransferase GidB [Vibrio vulnificus CMCP6]
gi|37681445|ref|NP_936054.1| glucose-inhibited division protein B [Vibrio vulnificus YJ016]
gi|320154848|ref|YP_004187227.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio vulnificus MO6-24/O]
gi|29336648|sp|Q8DDH8|RSMG_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976474|sp|Q7MGH0|RSMG_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27360563|gb|AAO09499.1| methyltransferase GidB [Vibrio vulnificus CMCP6]
gi|37200197|dbj|BAC96025.1| glucose inhibited division protein B [Vibrio vulnificus YJ016]
gi|319930160|gb|ADV85024.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio vulnificus MO6-24/O]
Length = 211
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V+ E+L + L KW+K NL S +D ++H+ DS+ V H +ID+G
Sbjct: 18 QVNERQREQLLGYVELLNKWNKAYNLTSVRDPQDMLVKHILDSI-VVAPHLDGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G G PGI +I L++S K+ F++ V+ + R++E Q
Sbjct: 77 TGPGLPGIPLAIMHPE---KTFFLLDSLGKRIRFIKQVLHELKIENVTTVQSRVEEF-QP 132
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A + ++E+
Sbjct: 133 EEKFDGVLSRAFASMTDMVEW 153
>gi|120600845|ref|YP_965419.1| 16S rRNA methyltransferase GidB [Shewanella sp. W3-18-1]
gi|146295046|ref|YP_001185470.1| 16S rRNA methyltransferase GidB [Shewanella putrefaciens CN-32]
gi|166224613|sp|A4YCI8|RSMG_SHEPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224615|sp|A1RQC0|RSMG_SHESW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120560938|gb|ABM26865.1| methyltransferase GidB [Shewanella sp. W3-18-1]
gi|145566736|gb|ABP77671.1| methyltransferase GidB [Shewanella putrefaciens CN-32]
gi|319428564|gb|ADV56638.1| methyltransferase GidB [Shewanella putrefaciens 200]
Length = 206
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ + E ++L F + KW+K NL S E +RH+ DSL V H +ID+G
Sbjct: 16 SATAEQKKQLIDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSL-VVSKHLQGERFIDVG 74
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G G PGI +I + L++S K+ F + V + R EA Q
Sbjct: 75 TGPGLPGIPLAIMNPN---KTFVLLDSLGKRIRFQKQVAFELGIRNISSVESRVEAYQAE 131
Query: 140 TTCDVISARALADLDTLLEY 159
D + +RA A + +L +
Sbjct: 132 QQFDGVLSRAFASIQDMLSW 151
>gi|41410443|ref|NP_963279.1| glucose-inhibited division protein B [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|45645208|sp|Q9L7M3|RSMG_MYCPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|41399277|gb|AAS06895.1| Gid [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 248
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V+ W RH+ +S V +L ID+GSG G PGI +I + V L
Sbjct: 58 GLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPLAIARPDL---EVVL 114
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISARALADLDTLLEYSF 161
+E +++ FL VV + +V R +E P D +RA+A LD L ++S
Sbjct: 115 LEPLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVSRAVAALDKLTKWSM 174
Query: 162 PWLYQ 166
P L
Sbjct: 175 PLLRH 179
>gi|56751255|ref|YP_171956.1| 16S rRNA methyltransferase GidB [Synechococcus elongatus PCC 6301]
gi|81299078|ref|YP_399286.1| 16S rRNA methyltransferase GidB [Synechococcus elongatus PCC 7942]
gi|81596038|sp|Q5N2N4|RSMG_SYNP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123557523|sp|Q31RM0|RSMG_SYNE7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56686214|dbj|BAD79436.1| glucose inhibited division protein B [Synechococcus elongatus PCC
6301]
gi|81167959|gb|ABB56299.1| methyltransferase GidB [Synechococcus elongatus PCC 7942]
Length = 242
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-----YPSIWIDLGSGGGF 84
E Y + ++++NL + +F +H+ DSL + L P + ID+G+GGGF
Sbjct: 29 EALYHGIIAGNQRLNLTRITDPAEFTEKHLWDSL--YGLRPLLTDDWSGEIIDIGTGGGF 86
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
PG+ +I L+ V L++S KK FL+ + Q+
Sbjct: 87 PGLPAAIALTKSR---VMLLDSTRKKIQFLQTLAQE 119
>gi|254777657|ref|ZP_05219173.1| 16S rRNA methyltransferase GidB [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 248
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V+ W RH+ +S V +L ID+GSG G PGI +I + V L
Sbjct: 58 GLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPLAIARPDL---EVVL 114
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISARALADLDTLLEYSF 161
+E +++ FL VV + +V R +E P D +RA+A LD L ++S
Sbjct: 115 LEPLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVSRAVAALDKLTKWSM 174
Query: 162 PWLYQ 166
P L
Sbjct: 175 PLLRH 179
>gi|187930587|ref|YP_001901074.1| 16S rRNA methyltransferase GidB [Ralstonia pickettii 12J]
gi|187727477|gb|ACD28642.1| methyltransferase GidB [Ralstonia pickettii 12J]
Length = 222
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ + L A ++ +++L + L KW++ NL + D H+ DSL
Sbjct: 6 TDARAELEAGARALGLSLDDAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 65
Query: 64 ----RVFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
R+ L P +D+GSGGG PGI +I + +V++++ KK +FL
Sbjct: 66 SAVSRIAGLARRAQPDAPRVLDVGSGGGLPGIPLAIAFPDVSVTMVDIVQ---KKTAFL 121
>gi|227876535|ref|ZP_03994646.1| possible S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Mobiluncus mulieris ATCC
35243]
gi|269977735|ref|ZP_06184695.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris 28-1]
gi|227842849|gb|EEJ53047.1| possible S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Mobiluncus mulieris ATCC
35243]
gi|269934039|gb|EEZ90613.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris 28-1]
Length = 224
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ YF L + LV W RH+ + + P + D+GSG G PG++
Sbjct: 34 MRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGLPGLV 93
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
+I ++ V LIES +K+ +L +V + +V R ++ ++A
Sbjct: 94 LAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDL-HGKEHFPFVTA 149
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+ +L TLL + P + K
Sbjct: 150 RAVGNLSTLLGWVAPLVRSK 169
>gi|6969267|gb|AAF33688.1| putative gidB [Mycobacterium avium subsp. paratuberculosis]
Length = 245
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V+ W RH+ +S V +L ID+GSG G PGI +I + V L
Sbjct: 58 GLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPLAIARPDL---EVVL 114
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISARALADLDTLLEYSF 161
+E +++ FL VV + +V R +E P D +RA+A LD L ++S
Sbjct: 115 LEPLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVSRAVAALDKLTKWSM 174
Query: 162 PWLYQ 166
P L
Sbjct: 175 PLLRH 179
>gi|91795107|ref|YP_564758.1| glucose-inhibited division protein B [Shewanella denitrificans
OS217]
gi|123356335|sp|Q12HP1|RSMG_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91717109|gb|ABE57035.1| methyltransferase GidB [Shewanella denitrificans OS217]
Length = 208
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIIT 89
F + KW+K NL S + E IRHV DSL V PY S +ID+G+G G PGI
Sbjct: 28 FVEMLNKWNKAYNLTSVRSPEQMLIRHVMDSLTV---SPYLSGKRFIDVGTGPGLPGIPL 84
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITT 141
+I E L++S K+ F + V + +R + F I+
Sbjct: 85 AIMNPDKE---FVLLDSLGKRIRFQKQVQFELKINNISSVESRVEAFQPEIK-------- 133
Query: 142 CDVISARALADLDTLL 157
D + +RA A + +L
Sbjct: 134 FDGVLSRAFASVQDML 149
>gi|224498352|ref|ZP_03666701.1| glucose-inhibited division protein B [Listeria monocytogenes
Finland 1988]
Length = 238
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + SI
Sbjct: 16 ELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFESI-C 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVYFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|304385713|ref|ZP_07368057.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
gi|304328217|gb|EFL95439.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
Length = 243
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIW 75
+ VS + + + +Y ++ ++ +NL + + ++ +++H DS+ P P I
Sbjct: 15 WTVSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTPGIA 74
Query: 76 I-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGK 126
+ D+G+G GFP + I L ++ V +++S NK+ FL+ +V + R +
Sbjct: 75 LCDVGAGAGFPSLPMKILLPELK---VTIVDSLNKRIKFLQALVDELGLTDVELVHDRAE 131
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F + + +++ARA+A L L E P + Q
Sbjct: 132 TFGAKKS---AYRASFALVTARAVARLSVLSELCLPLVKQ 168
>gi|289810085|ref|ZP_06540714.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 123
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I L
Sbjct: 35 KWNKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIVLPD 91
Query: 96 IEGGLVNLIESKNKKASFLRYV 117
L++S K+ FLR V
Sbjct: 92 AH---FTLLDSLGKRVRFLRQV 110
>gi|307699839|ref|ZP_07636890.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris FB024-16]
gi|307614877|gb|EFN94095.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris FB024-16]
Length = 224
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ YF L + LV W RH+ + + P + D+GSG G PG++
Sbjct: 34 MRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGLPGLV 93
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
+I ++ V LIES +K+ +L +V + +V R ++ ++A
Sbjct: 94 LAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDL-HGKEHFPFVTA 149
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+ +L TLL + P + K
Sbjct: 150 RAVGNLSTLLGWVAPLVRPK 169
>gi|306817496|ref|ZP_07451240.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris ATCC 35239]
gi|304649720|gb|EFM47001.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris ATCC 35239]
Length = 224
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ YF L + LV W RH+ + + P + D+GSG G PG++
Sbjct: 34 MRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGLPGLV 93
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
+I ++ V LIES +K+ +L +V + +V R ++ ++A
Sbjct: 94 LAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDL-HGKEHFPFVTA 149
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+ +L TLL + P + K
Sbjct: 150 RAVGNLSTLLGWVAPLVRPK 169
>gi|282853031|ref|ZP_06262368.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J139]
gi|282582484|gb|EFB87864.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J139]
Length = 208
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S+ + L P D+GSG G PGI +I +E + L
Sbjct: 36 GLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MIL 92
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
IE ++++FL + + +V R A DV+ +RA+A L TL+ ++
Sbjct: 93 IEPMLRRSNFLTEAIDELGLDDRVSVVR-GRAEDADLHVDVVVSRAVAKLATLINWT 148
>gi|300812283|ref|ZP_07092719.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496703|gb|EFK31789.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 239
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 77/156 (49%), Gaps = 17/156 (10%)
Query: 16 LNTYNVSRETLEKLEY--FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ YN +++ ++ ++ ++ ++ +NL + ++ +++H DS+ L +P
Sbjct: 10 LSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLL--WPE 67
Query: 74 IWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
++ D+G+G GFP + I +E V +++S K+ +FL +++K G
Sbjct: 68 VFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEKLGIEGVN 124
Query: 128 F----ACRIQEAPQMITTCDVISARALADLDTLLEY 159
A + + P D+++ARA+A + L EY
Sbjct: 125 LVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEY 160
>gi|304390474|ref|ZP_07372427.1| 16S rRNA methyltransferase GidB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326230|gb|EFL93475.1| 16S rRNA methyltransferase GidB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 226
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
++ Y+ L + L+ W RH+ + + QL P D+GSG G PG+
Sbjct: 36 QMRYYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEGVQVADVGSGAGLPGL 95
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +I + + LIES ++ +L++ +++ E + T ++A
Sbjct: 96 VLAIGRPDLS---LTLIESMARRCEWLQFCIEELGLDNVRIRNARAEDIRGKQTFSYLTA 152
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+ +L TLL ++ P + ++
Sbjct: 153 RAVGNLSTLLGWTAPLVKKQ 172
>gi|260654329|ref|ZP_05859819.1| 16S rRNA methyltransferase GidB [Jonquetella anthropi E3_33 E1]
gi|260630962|gb|EEX49156.1| 16S rRNA methyltransferase GidB [Jonquetella anthropi E3_33 E1]
Length = 212
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
++ L SS W HV D L + ID+G+GGG PG++ ++ V
Sbjct: 15 RVRLTGSSDPTVLWQEHVTDCLYLASAVEGTEKIIDVGTGGGLPGVVLAVCFPKSH---V 71
Query: 102 NLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALADLDTLLEY 159
L++S+ KKA L +V+ V + R +E A D ARA+ + L EY
Sbjct: 72 TLLDSQKKKAVQLGKIVEALELENVSVISARSEELAAARREEWDCAVARAVCEAPVLAEY 131
Query: 160 SFPWLYQ 166
P + Q
Sbjct: 132 LSPLVRQ 138
>gi|298345822|ref|YP_003718509.1| glucose-inhibited division protein B [Mobiluncus curtisii ATCC
43063]
gi|298235883|gb|ADI67015.1| glucose-inhibited division protein B [Mobiluncus curtisii ATCC
43063]
Length = 226
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
++ Y+ L + L+ W RH+ + + QL P D+GSG G PG+
Sbjct: 36 QMRYYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEGVQVADVGSGAGLPGL 95
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +I + + LIES ++ +L++ +++ E + T ++A
Sbjct: 96 VLAIGRPDLS---LTLIESMARRCEWLQFCIEELGLDNVRIRNARAEDIRGKQTFSYLTA 152
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+ +L TLL ++ P + ++
Sbjct: 153 RAVGNLSTLLGWTAPLVKKQ 172
>gi|261823730|ref|YP_003261836.1| 16S rRNA methyltransferase GidB [Pectobacterium wasabiae WPP163]
gi|261607743|gb|ACX90229.1| methyltransferase GidB [Pectobacterium wasabiae WPP163]
Length = 206
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S + IRH+ DS+ V + H +ID+G+G G PGI +I
Sbjct: 33 KWNKAYNLTSVRDPQQMLIRHIMDSI-VVESHLSGQRFIDVGTGPGLPGIPLAIVRPESH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ FLR V + R++ P VIS RA A L +
Sbjct: 92 ---FTLLDSLGKRVRFLRQVQHELQLENITPVQSRVEAFPAEPPFDGVIS-RAFASLQDM 147
Query: 157 LEY 159
+ +
Sbjct: 148 ISW 150
>gi|123444381|ref|YP_001008346.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332163558|ref|YP_004300135.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|166224629|sp|A1JTD7|RSMG_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122091342|emb|CAL14228.1| glucose inhibited division protein B [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|318608065|emb|CBY29563.1| rrna small subunit methyltransferase, glucose inhibited division
protein GidB [Yersinia enterocolitica subsp. palearctica
Y11]
gi|325667788|gb|ADZ44432.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861788|emb|CBX71961.1| ribosomal RNA small subunit methyltransferase G [Yersinia
enterocolitica W22703]
Length = 206
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 20/133 (15%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S +RH+ DS+ V H S +ID+G+G G PGI +I
Sbjct: 30 LLDKWNKAYNLTSVRDPMQMLVRHILDSI-VVNPHLQGSRFIDVGTGPGLPGIPLAIVRP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDVIS 146
L++S K+ FLR V ++ +R + FA + D +
Sbjct: 89 DAH---FVLLDSLGKRVRFLRQVQHELGLSNIEPVQSRVEDFAAK--------PPFDGVI 137
Query: 147 ARALADLDTLLEY 159
+RA A L +L +
Sbjct: 138 SRAFASLQDMLSW 150
>gi|315657683|ref|ZP_07910565.1| glucose inhibited division protein B [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492155|gb|EFU81764.1| glucose inhibited division protein B [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 226
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
++ Y+ L + L+ W RH+ + + QL P D+GSG G PG+
Sbjct: 36 QMRYYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEGVQVADVGSGAGLPGL 95
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +I + + LIES ++ +L++ +++ E + T ++A
Sbjct: 96 VLAIGRPDLS---LTLIESMARRCEWLQFCIEELGLDNVRIRNARAEDIRGKQTFSYLTA 152
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+ +L TLL ++ P + ++
Sbjct: 153 RAVGNLSTLLGWTAPLVKKQ 172
>gi|156936120|ref|YP_001440036.1| 16S rRNA methyltransferase GidB [Cronobacter sakazakii ATCC
BAA-894]
gi|166224587|sp|A7MMW2|RSMG_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156534374|gb|ABU79200.1| hypothetical protein ESA_04014 [Cronobacter sakazakii ATCC BAA-894]
Length = 207
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + + KW+K NL S + +RH+ DS+ V + H + +ID+G+G G PGI
Sbjct: 23 QLVAYVDMLNKWNKAYNLTSVRDPNEMLVRHIMDSI-VVEPHLKGTRFIDVGTGPGLPGI 81
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+I L++S K+ FLR V
Sbjct: 82 PLAIVRPDSH---FTLLDSLGKRVRFLRQV 108
>gi|320104128|ref|YP_004179719.1| methyltransferase GidB [Isosphaera pallida ATCC 43644]
gi|319751410|gb|ADV63170.1| methyltransferase GidB [Isosphaera pallida ATCC 43644]
Length = 505
Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S E + +L ++ L + ++NL E+ ++H DSL V + P+ ID+G+
Sbjct: 22 LSDEAIGRLWRYHRLLRAANPELNLTRIHQFENMVLKHYVDSLLVTRFEALPTPLIDMGT 81
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PG+ ++L+ E L+ L E + + FL VV + G ++ P IT
Sbjct: 82 GPGLPGV--PLKLARPELELI-LAEPRGARVEFLERVVAELGLEG------VEVHPGKIT 132
Query: 141 ------TCDVISARALADLDTLLE 158
T VI+ RA+A + LE
Sbjct: 133 RRYDRPTRGVIT-RAVASIPETLE 155
>gi|148825127|ref|YP_001289881.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
F11]
gi|148723654|gb|ABR08279.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis F11]
Length = 224
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E + FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLHRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|310778409|ref|YP_003966742.1| 16S rRNA m(7)G-527 methyltransferase [Ilyobacter polytropus DSM
2926]
gi|309747732|gb|ADO82394.1| 16S rRNA m(7)G-527 methyltransferase [Ilyobacter polytropus DSM
2926]
Length = 233
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQL 93
L L+ +K NL + + +H DS+ + + + ID+G+G GFPG++ +I
Sbjct: 30 LLLETNKHTNLTAIRDEDSLIEKHFIDSMLLQKSISENTETAIDIGTGAGFPGMVLAICN 89
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMITTCDVISARAL 150
I+ L++S KK FL V + +V R +E + T D+ R +
Sbjct: 90 PKIK---FTLMDSVGKKTDFLEMVKNELGLENVEVINDRAEEFIKNEKRGTYDLGLCRGV 146
Query: 151 ADLDTLLEYSFPWL 164
+ L+ +LEY P+L
Sbjct: 147 SKLNVILEYMIPFL 160
>gi|270290031|ref|ZP_06196257.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
gi|270281568|gb|EFA27400.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
Length = 243
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIWI 76
VS + + + +Y ++ ++ +NL + + ++ +++H DS+ P P I +
Sbjct: 16 TVSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTPLLEAPQFFTPGIAL 75
Query: 77 -DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKV 127
D+G+G GFP + I L ++ V +++S NK+ FL+ +V + R +
Sbjct: 76 CDVGAGAGFPSLPMKILLPELK---VTIVDSLNKRIKFLQALVDELGLTDVELVHDRAET 132
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F + + +++ARA+A L L E P + Q
Sbjct: 133 FGAKKS---AYRASFALVTARAVARLSVLSELCLPLVKQ 168
>gi|242092572|ref|XP_002436776.1| hypothetical protein SORBIDRAFT_10g008640 [Sorghum bicolor]
gi|241914999|gb|EER88143.1| hypothetical protein SORBIDRAFT_10g008640 [Sorghum bicolor]
Length = 190
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 21/100 (21%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----------------IDLG 79
L+W++++NL + + + RHV DSL + L P + ID+G
Sbjct: 68 LLEWNQRMNLTAVTDEAEVMTRHVADSLAM--LPPLERAYRGRSTSAGGSIDGVSLIDVG 125
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SG G PG+I ++ S + L+ES K+ +FL + V+
Sbjct: 126 SGAGLPGLILAVARPSWK---FTLLESMRKRCTFLEHAVE 162
>gi|215405977|ref|ZP_03418158.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
02_1987]
gi|215448266|ref|ZP_03435018.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T85]
gi|289747763|ref|ZP_06507141.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 02_1987]
gi|289760092|ref|ZP_06519470.1| ribosomal RNA small subunit methyltransferase G [Mycobacterium
tuberculosis T85]
gi|294995601|ref|ZP_06801292.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis 210]
gi|289688291|gb|EFD55779.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 02_1987]
gi|289715656|gb|EFD79668.1| ribosomal RNA small subunit methyltransferase G [Mycobacterium
tuberculosis T85]
gi|326905752|gb|EGE52685.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis W-148]
Length = 224
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
++ ++ FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LDPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|145632754|ref|ZP_01788488.1| glucose-inhibited division protein B [Haemophilus influenzae 3655]
gi|144986949|gb|EDJ93501.1| glucose-inhibited division protein B [Haemophilus influenzae 3655]
Length = 203
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVTPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 130 EDKFDGVLSRAFASLKDMTDW 150
>gi|332143483|ref|YP_004429221.1| glucose-inhibited division protein B [Alteromonas macleodii str.
'Deep ecotype']
gi|254766873|sp|B4RS91|RSMG_ALTMD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|327553505|gb|AEB00224.1| glucose-inhibited division protein B [Alteromonas macleodii str.
'Deep ecotype']
Length = 211
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +S ++L + L KW+K NL S + ++H+ DSL + H ID
Sbjct: 19 SLELSERQQQQLVDYVLLMDKWNKAYNLTSVRDPKQMMVKHILDSLAIVP-HLEGDNIID 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PG+ +I L++S K+ F+ V + EA
Sbjct: 78 VGTGPGLPGMPLAIAFPEKR---FTLLDSLGKRVRFMTQSVHTLGLKNVTPVQSRVEAHN 134
Query: 138 MITTCDVISARALADLDTLLEY 159
D++ +RA A L +L +
Sbjct: 135 GEVPYDIVLSRAFASLKDMLHW 156
>gi|238759550|ref|ZP_04620712.1| Ribosomal RNA small subunit methyltransferase G [Yersinia aldovae
ATCC 35236]
gi|238702209|gb|EEP94764.1| Ribosomal RNA small subunit methyltransferase G [Yersinia aldovae
ATCC 35236]
Length = 206
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ N LL ++ +K + + L KW+K NL S +RH+ DS+ V
Sbjct: 4 KLNSLLTAAGIALPDQQKYQLVGYVELLHKWNKAYNLTSVRDPMQMLVRHILDSI-VVNP 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H + +ID+G+G G PGI +I L++S K+ FLR V
Sbjct: 63 HLQGNRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQV 108
>gi|158521205|ref|YP_001529075.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
gi|158510031|gb|ABW66998.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
Length = 246
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
V+ LE +W++ +NL + + + +H DS+ P +D+G+
Sbjct: 34 VTDRHLESFSLHAEELARWNRTVNLTAITDPAESAEKHFLDSIVPATFIPPDGTLLDIGT 93
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ--EAPQ 137
G GFPGI + S++ + L++S K+ +FL V++ R V R++ E P
Sbjct: 94 GAGFPGIPLKVVFPSLD---LTLLDSALKRVTFLLQVLRLLGLERTIVLHRRMEQMERPP 150
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D I RA L + + P L +K
Sbjct: 151 AARPFDTIICRAFTALPAFVAAALPLLSEK 180
>gi|300742662|ref|ZP_07072683.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa M567]
gi|300381847|gb|EFJ78409.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa M567]
Length = 210
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV + V + + D+GSG G PG+ +I + + L
Sbjct: 39 GLIGPREVPRLWARHVLNCAAVQEYIAEGASVADVGSGAGLPGLCLAIARPDLS---ITL 95
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
IE ++ +L VV+ K+ R ++A + DV++ARA++ L L++ + P
Sbjct: 96 IEPLERRVIWLHEVVEDLGLENVKILRSRAEQAVGQV-EADVVTARAVSALVGLVDITLP 154
Query: 163 WL 164
L
Sbjct: 155 IL 156
>gi|254427374|ref|ZP_05041081.1| methyltransferase GidB [Alcanivorax sp. DG881]
gi|196193543|gb|EDX88502.1| methyltransferase GidB [Alcanivorax sp. DG881]
Length = 204
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L +KW++ NL + ++ RH+ DSL V H +D+G+G G PGII ++
Sbjct: 29 YVDLLVKWNQAYNLTAIRDPQEMVTRHLLDSLAVLP-HLGEGDTLDVGTGAGIPGIILAV 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMITTCDVISA 147
+ + V L++S KK F+R ++ +V R+++ AP I C
Sbjct: 88 --ARPQQAFV-LLDSNGKKTRFVRQARRELGLDNVEVVHGRVEQYRKAPSQI-IC----- 138
Query: 148 RALADLDTLLEYSFPWL 164
RA A L +L P +
Sbjct: 139 RAFASLSDMLALMTPIM 155
>gi|16272434|ref|NP_438647.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae Rd KW20]
gi|68249089|ref|YP_248201.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae 86-028NP]
gi|145630331|ref|ZP_01786112.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|148827683|ref|YP_001292436.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae PittGG]
gi|260580449|ref|ZP_05848277.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae RdAW]
gi|260582247|ref|ZP_05850040.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae NT127]
gi|319775586|ref|YP_004138074.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3047]
gi|329122368|ref|ZP_08250955.1| glucose inhibited division protein B [Haemophilus aegyptius ATCC
11116]
gi|1169897|sp|P44728|RSMG_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81336505|sp|Q4QN56|RSMG_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224593|sp|A5UGZ7|RSMG_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1573466|gb|AAC22146.1| glucose-inhibited division protein (gidB) [Haemophilus influenzae
Rd KW20]
gi|68057288|gb|AAX87541.1| methyltransferase GidB [Haemophilus influenzae 86-028NP]
gi|144984066|gb|EDJ91503.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|148718925|gb|ABR00053.1| glucose-inhibited division protein B [Haemophilus influenzae
PittGG]
gi|260092791|gb|EEW76726.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae RdAW]
gi|260094615|gb|EEW78510.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae NT127]
gi|301169207|emb|CBW28804.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae 10810]
gi|317450177|emb|CBY86393.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3047]
gi|327473650|gb|EGF19069.1| glucose inhibited division protein B [Haemophilus aegyptius ATCC
11116]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVTPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 130 EDKFDGVLSRAFASLKDMTDW 150
>gi|319949437|ref|ZP_08023498.1| 16S rRNA methyltransferase GidB [Dietzia cinnamea P4]
gi|319436899|gb|EFV91958.1| 16S rRNA methyltransferase GidB [Dietzia cinnamea P4]
Length = 239
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ Y FL ++ L+ W RHV +S +D+GSG G PGI
Sbjct: 34 IRYVEFLGTAGLER-GLMGPRERPRLWDRHVLNSAAAASALEDGEAVVDIGSGAGLPGIP 92
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT--CDVIS 146
++ + V L+E ++ +FL ++ + +V R +E + T DV++
Sbjct: 93 LALARPDLR---VTLVEPLLRRVTFLEEIIDELGIDVRVVRGRAEEKAVIATAGNADVVT 149
Query: 147 ARALADLDTLLEYSFPWL 164
+RA+A L L +S P L
Sbjct: 150 SRAVAPLAKLAGWSAPLL 167
>gi|323496916|ref|ZP_08101944.1| 16S rRNA methyltransferase GidB [Vibrio sinaloensis DSM 21326]
gi|323317990|gb|EGA70973.1| 16S rRNA methyltransferase GidB [Vibrio sinaloensis DSM 21326]
Length = 210
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VS + E L + + KW+K NL S +D ++H+ DS+ + H +ID+G
Sbjct: 18 DVSDKQRELLVGYVAMLDKWNKAYNLTSVRDPQDMLVKHILDSI-IVSTHLQGERFIDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQM 138
+G G PGI +I E L++S K+ F++ + + R++E Q
Sbjct: 77 TGPGLPGIPLAIMCPDKE---FFLLDSLGKRIRFIKQALHELKIENVTPIQSRVEEF-QP 132
Query: 139 ITTCDVISARALADL 153
D + +RA A +
Sbjct: 133 EEKFDAVLSRAFASM 147
>gi|261346699|ref|ZP_05974343.1| 16S rRNA methyltransferase GidB [Providencia rustigianii DSM 4541]
gi|282565099|gb|EFB70634.1| 16S rRNA methyltransferase GidB [Providencia rustigianii DSM 4541]
Length = 207
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + L KW+K NL S E +RH+ DS+ V H +ID+G+G G PG
Sbjct: 24 QQLVDYVGLLNKWNKAYNLTSVRDPELMLVRHIMDSI-VVNDHLKGYKFIDVGTGPGLPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
+ +I L++S K+ FL+ V + + R++E P + D +
Sbjct: 83 VPLAIVRPDSH---FVLLDSLGKRIRFLKQVQHELGLNNIEPVQARVEEYP-VKDGFDGV 138
Query: 146 SARALADLDTLLEY 159
+RA A L+ +L +
Sbjct: 139 ISRAFASLNDMLSW 152
>gi|157273313|gb|ABV27212.1| methyltransferase GidB [Candidatus Chloracidobacterium
thermophilum]
Length = 247
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
W+D+GSGGGFPG++ ++ + L E + KKA+FL++ V++ A G+V
Sbjct: 102 WVDVGSGGGFPGLVLAVACPNWH---FILAERRAKKAAFLQHCVEELALGGRV 151
>gi|239993738|ref|ZP_04714262.1| glucose-inhibited division protein B [Alteromonas macleodii ATCC
27126]
Length = 211
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ ++S + ++L + L KW+K NL S + ++H+ DSL + +I ID
Sbjct: 19 SLDLSDKQQQQLVDYVLLMDKWNKAYNLTSVRDPKQMMVKHILDSLAIVPFLDGNNI-ID 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PG+ +I L++S K+ F+ V E
Sbjct: 78 VGTGPGLPGMPLAIAFPDKS---FTLLDSLGKRVRFMTQCVHTLGLTNVTPVQSRVEEHN 134
Query: 138 MITTCDVISARALADLDTLLEY 159
T D++ +RA A L +L +
Sbjct: 135 GDTPYDIVLSRAFASLKDMLHW 156
>gi|229844352|ref|ZP_04464492.1| glucose-inhibited division protein B [Haemophilus influenzae
6P18H1]
gi|229812601|gb|EEP48290.1| glucose-inhibited division protein B [Haemophilus influenzae
6P18H1]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ + E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLINVIPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 130 EDKFDGVLSRAFASLKDMTDW 150
>gi|258655506|ref|YP_003204662.1| methyltransferase GidB [Nakamurella multipartita DSM 44233]
gi|258558731|gb|ACV81673.1| methyltransferase GidB [Nakamurella multipartita DSM 44233]
Length = 262
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ + + L P+ + +D+GSG G PG++ +I ++ V L
Sbjct: 60 GLIGPRETDRLWTRHLLNCAALTDLIPHGARLVDVGSGAGLPGLVLAIARPDVQ---VIL 116
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
+E ++ FL + + +V R Q+A D++ +RA+A L L
Sbjct: 117 VEPLERRVRFLLEAIDRLELDNCEVVRSRAQDAGPSAGGADLVVSRAVAPLGRL 170
>gi|154174377|ref|YP_001408663.1| methyltransferase GidB [Campylobacter curvus 525.92]
gi|193806437|sp|A7GZM1|RSMG_CAMC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112802117|gb|EAT99461.1| methyltransferase GidB [Campylobacter curvus 525.92]
Length = 186
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
K N V S T + + DS+ + L YP ID+GSG GFP I ++ L
Sbjct: 21 KFNRVHSLTNYKNFDEQISDSISPLKWLKFYPETAIDVGSGAGFPAIFLAMILKDCRWW- 79
Query: 101 VNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLE 158
L E KK+SFL YV + + V +C+I+ + +I++RAL LL+
Sbjct: 80 --LFEPNAKKSSFLSYVKAELNLKNVSVKSCKIEACEPFVA--QLITSRALMKTKELLK 134
>gi|289705890|ref|ZP_06502269.1| 16S rRNA methyltransferase GidB [Micrococcus luteus SK58]
gi|289557375|gb|EFD50687.1| 16S rRNA methyltransferase GidB [Micrococcus luteus SK58]
Length = 216
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + E + + L+ W RHV + V +L P ++ D+GSG G
Sbjct: 22 EALPRAEAYVAHLADTGIEWGLIGPREAPRLWERHVLNCAVVEELLPQGALVADVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG+ ++ + LIE ++ +L VV V R ++ +
Sbjct: 82 LPGLCLALARPDCQ---FLLIEPLERRVEWLDMVVADLGLENVDVIRGRAEQVSGNLDV- 137
Query: 143 DVISARALADLDTLLEYSFPWL 164
DV++ARA++ L TL+ + P L
Sbjct: 138 DVVTARAVSALKTLVPLTMPML 159
>gi|302035746|ref|YP_003796068.1| methyltransferase GidB [Candidatus Nitrospira defluvii]
gi|300603810|emb|CBK40142.1| Methyltransferase GidB [Candidatus Nitrospira defluvii]
Length = 218
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 32 FYFLFL----KWSKKINLVSSSTVEDFWIRHVEDS---LRVFQLHPYPSIWIDLGSGGGF 84
++F +L KW+K INL + + ++H DS L+V ++ + +D+G+G GF
Sbjct: 30 YFFRYLVELKKWNKAINLTAIDDDREVLVKHFIDSIAGLKVIDINDETEL-LDVGAGAGF 88
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P + + V L++ KK +FLRYVV G A
Sbjct: 89 PALPLKFVRPELS---VELLDPNEKKGAFLRYVVGTLGLVGATVAT 131
>gi|184201998|ref|YP_001856205.1| 16S rRNA methyltransferase GidB [Kocuria rhizophila DC2201]
gi|183582228|dbj|BAG30699.1| methyltransferase GidB [Kocuria rhizophila DC2201]
Length = 253
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RHV + V +L + +D+GSG G PG+ +I + + L
Sbjct: 81 GLIGPREAPRLWERHVLNCAVVQELIAPDARVVDVGSGAGLPGLCLAIARPDLH---LTL 137
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+E ++ +L VV V R ++A + + DV++ARA++ L L++ + P
Sbjct: 138 VEPLERRVVWLDEVVADLGLDNVTVLRARAEQAKKDVGPVDVVTARAVSALVGLVDITLP 197
Query: 163 WL 164
L
Sbjct: 198 LL 199
>gi|42525228|ref|NP_970608.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
gi|81829095|sp|Q6MGL7|RSMG3_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 3;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 3; Short=16S rRNA m7G
methyltransferase 3
gi|39577439|emb|CAE81262.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
Length = 221
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSI--W 75
++S + +L+ ++ LK+++ +NL+S+ TV H DS+ Q + PS+
Sbjct: 22 DLSPDLRTRLKTYHEELLKFNRTLNLISAKTVFVADALHFADSIMASQAIMKSNPSLDKI 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DLGSG GFPG+I ++ ++ V L+E KK FL +V
Sbjct: 82 YDLGSGNGFPGMIFALLYPKVQ---VVLVEFDQKKCEFLNHV 120
>gi|217965994|ref|YP_002351672.1| methyltransferase GidB [Listeria monocytogenes HCC23]
gi|254766895|sp|B8DD12|RSMG_LISMH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217335264|gb|ACK41058.1| methyltransferase GidB [Listeria monocytogenes HCC23]
gi|307572390|emb|CAR85569.1| glucose-inhibited division protein B [Listeria monocytogenes L99]
Length = 238
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--------ARGKVF 128
D+G+G GFP + I ++ V++++S K+ +FL + +K R ++F
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAEIF 131
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKY----DLVTARAVARMSVLSELCMPLV 163
>gi|193215519|ref|YP_001996718.1| 16S rRNA methyltransferase GidB [Chloroherpeton thalassium ATCC
35110]
gi|193088996|gb|ACF14271.1| methyltransferase GidB [Chloroherpeton thalassium ATCC 35110]
Length = 217
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 11 RANYLLNTY-------NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
RA L TY +S LE+L + + L+W++ +NLVS ++H+ SL
Sbjct: 3 RAELELVTYWTEKHGAELSNAQLERLWNYAEMILEWNQNVNLVSRKDAHTVMLKHILHSL 62
Query: 64 RVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ H + + +D+G+GGG PGI +I LI+S KK + R + +
Sbjct: 63 TMGFFHAFKTDESVLDIGTGGGLPGIPLAIAYPETR---FLLIDSVGKKINATRDMAMRL 119
Query: 122 AARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + R ++ + + +R + L L +++ P L
Sbjct: 120 GLKNVRTLKARAEDLKK--EKFHTVVSRQVTTLKKLCDWARPLL 161
>gi|126667598|ref|ZP_01738567.1| glucose-inhibited division protein B [Marinobacter sp. ELB17]
gi|126627867|gb|EAZ98495.1| glucose-inhibited division protein B [Marinobacter sp. ELB17]
Length = 215
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQLSS 95
KW+K NL + + R + DSL + P+ + +D+G+GGG PGI +I L
Sbjct: 39 KWNKAFNLTAVRDEREMVSRQLLDSLSIL---PFVTTHHLLDVGAGGGLPGIPLAIALPD 95
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+ L++S KK FL+ V + R EA Q IS+RA LD
Sbjct: 96 MR---FTLLDSNGKKTRFLKQCVLELGLRNLDVIHSRAEAYQPRELFIQISSRAFTALDN 152
>gi|291457896|ref|ZP_06597286.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419440|gb|EFE93159.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
Length = 261
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------- 75
LEK +Y + +K +NL S + D ++H DSL + + PS
Sbjct: 25 LEKFFLYYERMTEKNKVMNLTSITEESDVVLKHFTDSLSLAAVS-LPSAGDVSRETLLRN 83
Query: 76 -------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
ID+G+G GFPG+ I +E V L +S K+ FL ++++ +G
Sbjct: 84 TLPGKRLIDVGTGAGFPGLALKIAFPELE---VVLNDSLQKRLRFLNELIEELNLKG--I 138
Query: 129 ACRIQEAPQMI------TTCDVISARALADLDTLLEYSFPWL 164
+C A ++ D +RA+A L L EY P++
Sbjct: 139 SCVHGRAEELAHERKWRGAFDFSVSRAVARLSVLSEYDLPFV 180
>gi|254384780|ref|ZP_05000117.1| methyltransferase gidB [Streptomyces sp. Mg1]
gi|194343662|gb|EDX24628.1| methyltransferase gidB [Streptomyces sp. Mg1]
Length = 245
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + ++ P D+GSG G PGI ++ ++ + L
Sbjct: 47 GLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRRDLK---ITL 103
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL+ V+ T RG R +E + V++ARA+A LD L
Sbjct: 104 LEPLLRRTNFLQEAVELLGLDHVTVVRG-----RAEEVLGKLQPVHVVTARAVAPLDRLA 158
Query: 158 EYSFPWL 164
+ P L
Sbjct: 159 GWGVPLL 165
>gi|15805055|ref|NP_293740.1| 16S rRNA methyltransferase GidB [Deinococcus radiodurans R1]
gi|20177912|sp|Q9RYD6|RSMG_DEIRA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|6457673|gb|AAF09607.1|AE001865_4 gidB protein [Deinococcus radiodurans R1]
Length = 253
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGF 84
E+ L ++++NL + T ED ++H DSL + W +DLG+G GF
Sbjct: 30 EQFARLLALLRAGNERLNLTALKTEEDIVLKHFVDSLTTLRGGHLDGEWKTLDLGTGAGF 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQM 138
P + +I + + ++S KK F+R + T G+ A + ++ +
Sbjct: 90 PALPLAILRPELR---LTPLDSIRKKIDFVRETAAELGLSNVTPQVGR--AETLGQSAEH 144
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ D + ARA+A L L E + P L
Sbjct: 145 RGSYDRVVARAVAALPVLAELALPLL 170
>gi|283458989|ref|YP_003363638.1| S-adenosylmethionine-dependent methyltransferase [Rothia
mucilaginosa DY-18]
gi|283135053|dbj|BAI65818.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Rothia mucilaginosa DY-18]
Length = 213
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
L+ V W RHV + V + + P S+ D+GSG G PG+ +I ++ +
Sbjct: 42 GLIGPREVPRLWARHVLNCAVVQEYIAPNASVA-DVGSGAGLPGLCLAIARPDLK---LT 97
Query: 103 LIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
LIE ++ +L VV+ V R ++A + DV++ARA++ L LL+ +
Sbjct: 98 LIEPLERRVIWLNEVVEDLGLENVTVLRSRAEQAVGAV-EADVVTARAVSALVGLLDITL 156
Query: 162 PWL 164
P L
Sbjct: 157 PIL 159
>gi|307104809|gb|EFN53061.1| hypothetical protein CHLNCDRAFT_58678 [Chlorella variabilis]
Length = 1697
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE 134
ID+GSG G PGII +I E V L++S K+ F V+ A +V R +E
Sbjct: 283 IDVGSGAGLPGIILAIARPDWE---VTLLDSLQKRCRFAEAAVEAAGLANVRVHWGRAEE 339
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFP 162
A P + DV ARA+A+L L E P
Sbjct: 340 AGQDPALRQQHDVAIARAVAELRVLAELCLP 370
>gi|311112578|ref|YP_003983800.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa ATCC 17931]
gi|310944072|gb|ADP40366.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa ATCC 17931]
Length = 210
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV + V + + D+GSG G PG+ +I + + L
Sbjct: 39 GLIGPREVPRLWARHVLNCAAVQEYIAEGASVADVGSGAGLPGLCLAIARPDLA---ITL 95
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
IE ++ +L VV+ K+ R ++A + DV++ARA++ L L++ + P
Sbjct: 96 IEPLERRVIWLHEVVEDLGLENVKILRSRAEQAIGQV-DADVVTARAVSALVGLVDITLP 154
Query: 163 WL 164
L
Sbjct: 155 IL 156
>gi|255326487|ref|ZP_05367569.1| 16S rRNA methyltransferase GidB [Rothia mucilaginosa ATCC 25296]
gi|255296527|gb|EET75862.1| 16S rRNA methyltransferase GidB [Rothia mucilaginosa ATCC 25296]
Length = 213
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
L+ V W RHV + V + + P S+ D+GSG G PG+ +I ++ +
Sbjct: 42 GLIGPREVPRLWARHVLNCAVVQEYIAPNASVA-DVGSGAGLPGLCLAIARPDLK---LT 97
Query: 103 LIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
LIE ++ +L VV+ V R ++A + DV++ARA++ L LL+ +
Sbjct: 98 LIEPLERRVIWLNEVVEDLGLENVTVLRSRAEQAVGAV-EADVVTARAVSALVGLLDITL 156
Query: 162 PWL 164
P L
Sbjct: 157 PIL 159
>gi|163751412|ref|ZP_02158637.1| glucose-inhibited division protein B [Shewanella benthica KT99]
gi|161328715|gb|EDP99863.1| glucose-inhibited division protein B [Shewanella benthica KT99]
Length = 206
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 8 SILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S L YL + + ++L F + KW+K NL S + IRH+ DSL V
Sbjct: 3 SALLGEYLAEMNLTATEQQQQQLVGFVEMLNKWNKAYNLTSVRDPQQMLIRHIMDSLAV- 61
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H +ID+G+G G PGI +I + + V L++S K+ FL+ V
Sbjct: 62 SAHLVGERFIDVGTGPGLPGIPLAIM--NPDKHFV-LLDSLGKRIRFLKQV 109
>gi|309806385|ref|ZP_07700397.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
gi|308167216|gb|EFO69383.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
Length = 207
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
KK NL + ++ +++H DSL + ++ D+G+G GFP + I I
Sbjct: 5 KKTNLTRITEEDEVYLKHFYDSLTPIIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDI 64
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT---TCDVISARALAD 152
+ + +I+S K+ +FL +V++ + R ++A + I DV++ARA+A
Sbjct: 65 K---LTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVTARAVAR 121
Query: 153 LDTLLEYSFPWL 164
+ L EY P +
Sbjct: 122 MSVLSEYCLPLV 133
>gi|238810254|dbj|BAH70044.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 231
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSI----WIDLGSGGGFPGIITSIQLSS 95
+N+ T++D + + + DS+ F+ +H ++ +D+G+G GFP I I L +
Sbjct: 37 MNITGFKTLDDIFEQGILDSILAFENYMMHYDENLENKKILDVGAGAGFPSIPILIALDN 96
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+ +IES+ K+ +FL V + + R++E ++ ++I+ARA+A +
Sbjct: 97 KFN--LTIIESQKKRCNFLEKVKARFNLSVNIINSRVEEFFKLTNYFEIITARAVASIKV 154
Query: 156 L 156
L
Sbjct: 155 L 155
>gi|308190288|ref|YP_003923219.1| methyltransferase [Mycoplasma fermentans JER]
gi|319777682|ref|YP_004137333.1| methyltransferase gidb (glucose inhibiteddivision protein b)
[Mycoplasma fermentans M64]
gi|307625030|gb|ADN69335.1| methyltransferase [Mycoplasma fermentans JER]
gi|318038757|gb|ADV34956.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma fermentans M64]
Length = 230
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSI----WIDLGSGGGFPGIITSIQLSS 95
+N+ T++D + + + DS+ F+ +H ++ +D+G+G GFP I I L +
Sbjct: 36 MNITGFKTLDDIFEQGILDSILAFENYMMHYDENLENKKILDVGAGAGFPSIPILIALDN 95
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+ +IES+ K+ +FL V + + R++E ++ ++I+ARA+A +
Sbjct: 96 KFN--LTIIESQKKRCNFLEKVKARFNLSVNIINSRVEEFFKLTNYFEIITARAVASIKV 153
Query: 156 L 156
L
Sbjct: 154 L 154
>gi|315420685|gb|ADU15875.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+G G G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGRGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|152972649|ref|YP_001337795.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238897247|ref|YP_002921995.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae NTUH-K2044]
gi|166224594|sp|A6TG44|RSMG_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150957498|gb|ABR79528.1| glucose-inhibited division protein B [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549577|dbj|BAH65928.1| glucose-inhibited division protein B [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 207
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
+L + L KW+K NL S + +RH+ DS+ V PY S +ID+G+G G P
Sbjct: 23 QLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIVA---PYLQGSRFIDVGTGPGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
GI +I L++S K+ FLR V + R++ P V
Sbjct: 80 GIPLAIVCPESH---FTLLDSLGKRVRFLRQVQHELKLDNVTPVQSRVEAFPAEPPFDGV 136
Query: 145 ISARALADLDTLLEY 159
IS RA A L+ ++ +
Sbjct: 137 IS-RAFASLNDMVSW 150
>gi|145636245|ref|ZP_01791914.1| glucose-inhibited division protein B [Haemophilus influenzae
PittHH]
gi|145270410|gb|EDK10344.1| glucose-inhibited division protein B [Haemophilus influenzae
PittHH]
Length = 203
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVTPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 130 EDKFDGVLSRAFASLKDMTDW 150
>gi|325677529|ref|ZP_08157193.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
gi|325551776|gb|EGD21474.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
Length = 226
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV + + +L +D+GSG G PG+ +I + V L
Sbjct: 43 GLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPLAIARPDVR---VTL 99
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYS 160
+E +++ +L+ +V +V R +E + + DV+++RA+A L+ L +S
Sbjct: 100 VEPLLRRSVYLQEIVDSIGLDNVRVVRGRAEEPDVVKEVGGADVVTSRAVAPLEKLARWS 159
Query: 161 FP 162
P
Sbjct: 160 LP 161
>gi|323467284|gb|ADX70971.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|323467327|gb|ADX71014.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
Length = 240
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVF-QLHPYPSIWIDLGSGGGFPG 86
YF FL ++ ++ +NL + + +++H DS L VF + + D+G+G GFP
Sbjct: 28 YFKFL-IEVNEHVNLTRITEENEVYLKHFYDSITPLFVFGDVFKDGATLCDVGAGAGFPS 86
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITTC 142
I I S++ V +++S K+ +FL+ ++ K ++ R ++ Q
Sbjct: 87 IPLKILKPSLK---VTIVDSLAKRLTFLKDLIAKLGLDNVELVHGRAEDVGQNKLYREKF 143
Query: 143 DVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L EY P +
Sbjct: 144 DIVTARAIAKMSVLSEYCLPLV 165
>gi|269103812|ref|ZP_06156509.1| ribosomal RNA small subunit methyltransferase G [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268163710|gb|EEZ42206.1| ribosomal RNA small subunit methyltransferase G [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 206
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V+ + L++L + L KW+K NL S + ++H+ DS+ V + + +ID+G
Sbjct: 15 QVTEQQLDQLVGYVELLNKWNKAYNLTSVRDPNEMLVKHIMDSIVVSE-YLKGDHYIDVG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+G G PGI +I L++S K+ F+R V+
Sbjct: 74 TGPGLPGIPLAIMCPEKS---FTLLDSLGKRIRFIRQVI 109
>gi|309972357|gb|ADO95558.1| 16S rRNA 7-methylguanosine methyltransferase GidB [Haemophilus
influenzae R2846]
Length = 203
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + +++L L KW+K NL S ++ ++H+ DSL V PY +ID+
Sbjct: 16 ISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLQGDRFIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G PG+ +I S + L++S K+ SF+R +++ E Q
Sbjct: 73 GTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTNVTPVLSRVEEYQP 129
Query: 139 ITTCDVISARALADLDTLLEY 159
D + +RA A L + ++
Sbjct: 130 EDKFDGVLSRAFALLKDMTDW 150
>gi|303233445|ref|ZP_07320113.1| putative 16S rRNA methyltransferase GidB [Atopobium vaginae
PB189-T1-4]
gi|302480453|gb|EFL43545.1| putative 16S rRNA methyltransferase GidB [Atopobium vaginae
PB189-T1-4]
Length = 324
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 33/173 (19%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----------- 69
VS + L Y L ++ +K INL + I H DSL V H
Sbjct: 82 VSNAQITALYKHYSLLVETNKSINLTRITEPLAALILHYVDSLFVVHAHNTLCATGMIVR 141
Query: 70 --------------PYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ S+ +IDLG+G GFPGI L + + GL L++S KK +
Sbjct: 142 GTAGSEASSALQQISHGSLVSFIDLGTGAGFPGI--PFALLTGKSGL--LVDSVKKKIAC 197
Query: 114 LRYVVQKTAARGKVF--ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + V + R ++ P + +I ARA+A + TLLEY+ P L
Sbjct: 198 VSSFIDALDLSSSVTTSSMRFEDLPSLGYKTPLIIARAVAPIRTLLEYAAPLL 250
>gi|289450644|ref|YP_003475557.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185191|gb|ADC91616.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 263
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----------HPYP 72
E +KL+ + +K ++ +NL + + D ++H DSL + L H
Sbjct: 38 EAKDKLKKYGIELIKTNRMMNLTALTEPIDVAVKHFADSLTLLPLLKNEFSKFASAHAAD 97
Query: 73 SI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL------------RYVVQ 119
WID+G+G GFPG+ L+SI G ++L++S K+ +FL RY+
Sbjct: 98 QYRWIDVGTGAGFPGLPVQ-ALASI--GELSLLDSLKKRLAFLNDLAGILSVDNVRYIHA 154
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ G+ R + + ARA+A L L E P + Q
Sbjct: 155 RAEDAGRDKKYREHYS--------LAVARAVAPLPILCELCLPLVKQ 193
>gi|222100852|ref|YP_002535420.1| Methyltransferase gidB [Thermotoga neapolitana DSM 4359]
gi|254766910|sp|B9KAS1|RSMG_THENN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221573242|gb|ACM24054.1| Methyltransferase gidB [Thermotoga neapolitana DSM 4359]
Length = 229
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGK 126
+D+GSG G PG+I +I ++ V L++SK K FL +VV+K R +
Sbjct: 67 LLDVGSGNGVPGLILAIFFPELK---VTLLDSKEKAVQFLEHVVRKLNLENAAVVKERAE 123
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
F+ +E D +ARA+A L+TL+E P +
Sbjct: 124 NFSREHRE------EYDYATARAVARLNTLVEICAPAV 155
>gi|161505601|ref|YP_001572713.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|189040820|sp|A9MJR0|RSMG_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160866948|gb|ABX23571.1| hypothetical protein SARI_03777 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 207
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
KW+K NL S + +RH+ DS+ V PY +ID+G+G G PGI +I L
Sbjct: 33 KWNKAYNLTSVRDPAEMIVRHILDSIVVA---PYLQGQRFIDVGTGPGLPGIPLAIVLPD 89
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
L++S K+ FLR V + R++ P VIS RA A L
Sbjct: 90 AH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYPSEPPFDGVIS-RAFASLS 145
Query: 155 TLLEY 159
++ +
Sbjct: 146 DMVSW 150
>gi|303327750|ref|ZP_07358190.1| methyltransferase GidB [Desulfovibrio sp. 3_1_syn3]
gi|302862111|gb|EFL85045.1| methyltransferase GidB [Desulfovibrio sp. 3_1_syn3]
Length = 261
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----- 74
+V LE L + + +W+ +NLV + + +D R V DS F L +
Sbjct: 38 DVPSAALEPLAVYLEMLCRWNAAMNLVGARSWQDILARLVADS---FHLASFLEELPLPE 94
Query: 75 ----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFA 129
W DLGSG G PGI ++++ GG ++E + ++A FL ++ + + VF
Sbjct: 95 EPLSW-DLGSGAGLPGI--PLRMAWTRGGYY-MVEVRERRALFLSSILARLQLSATHVFR 150
Query: 130 CRIQEAPQ-MITTCDVISARALADLDTLLEYSFP 162
++ Q D I +RA LLE + P
Sbjct: 151 GSVEHFFQGQYYQADCIVSRAFMPWPELLELTLP 184
>gi|170288026|ref|YP_001738264.1| methyltransferase GidB [Thermotoga sp. RQ2]
gi|193806454|sp|B1L800|RSMG_THESQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170175529|gb|ACB08581.1| methyltransferase GidB [Thermotoga sp. RQ2]
Length = 228
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSG G PG+I +I ++ V L++S+ K +FLR V++K G V A + +
Sbjct: 66 LLDVGSGNGVPGLILAIFFPKLK---VVLLDSREKSVNFLRGVIEKLDL-GNVSAVKERA 121
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + D ++ARA+A L+ L+E P L
Sbjct: 122 ENFSRERREEFDYVTARAVARLNVLVEICTPAL 154
>gi|161508052|ref|YP_001578019.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DPC 4571]
gi|172048356|sp|A8YXD7|RSMG_LACH4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160349041|gb|ABX27715.1| Glucose inhibited division protein B [Lactobacillus helveticus DPC
4571]
Length = 240
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVF-QLHPYPSIWIDLGSGGGFPG 86
YF FL ++ ++ +NL + + +++H DS L VF + + D+G+G GFP
Sbjct: 28 YFKFL-IEVNEHVNLTRITEENEVYLKHFYDSITPLFVFGDVFKDGATLCDVGAGAGFPS 86
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITTC 142
I I S++ V +++S K+ +FL+ ++ K ++ R ++ Q
Sbjct: 87 IPLKILKPSLK---VTIVDSLAKRLTFLKDLIAKLGLDNVELVHGRAEDVGQNKLYREKF 143
Query: 143 DVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L EY P +
Sbjct: 144 DIVTARAVAKMSVLSEYCLPLV 165
>gi|254827370|ref|ZP_05232057.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
gi|254830761|ref|ZP_05235416.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 10403S]
gi|255016996|ref|ZP_05289122.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL F2-515]
gi|255025452|ref|ZP_05297438.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-003]
gi|258599748|gb|EEW13073.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
Length = 238
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S + +++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|16801993|ref|NP_472261.1| 16S rRNA methyltransferase GidB [Listeria innocua Clip11262]
gi|20177891|sp|Q926V6|RSMG_LISIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16415475|emb|CAC98159.1| GidB protein [Listeria innocua Clip11262]
Length = 238
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S + +++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDDQMKQFHDYFKMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|308235527|ref|ZP_07666264.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14018]
gi|311114009|ref|YP_003985230.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14019]
gi|310945503|gb|ADP38207.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14019]
Length = 236
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------D 77
+ L+K + F+ K LV + W RH+ +S V D
Sbjct: 32 DALDKCKMFHVKLQKEGLLRGLVGPRDMSILWERHILNSAAVVPFIKEAIKKSKKKSIAD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGGFPGI+ + L + V LIE ++ +L+ V+ +F R E
Sbjct: 92 VGSGGGFPGIVIAACLPDCD---VTLIEPMERRVLWLKECVELMGLDNVTIFHGRSDEII 148
Query: 137 QMITTC-----DVISARALADLDTLLEYSFPWL 164
+ I + DV++ RA+A + L ++ P L
Sbjct: 149 EKIKSHDISPFDVVTCRAVAPMTKLAGWTIPLL 181
>gi|184154551|ref|YP_001842891.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum IFO 3956]
gi|238689197|sp|B2GF22|RSMG_LACF3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|183225895|dbj|BAG26411.1| cell division protein GidB [Lactobacillus fermentum IFO 3956]
Length = 245
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 28/148 (18%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------WIDLGSGGGFP 85
+Y L ++ ++ +NL + + + +++H DSL YP + D+G+G GFP
Sbjct: 28 YYQLLVQTNEHLNLTAITAETEVYLKHFYDSLT--GAFAYPKLQSQALTLCDIGAGAGFP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLR-----------YVVQKTAARGKVFACRIQE 134
+ I +E V +++S NK+ +FL Y+V R + FA +
Sbjct: 86 SLPLKIAFPQLE---VTIVDSLNKRINFLADLCDDLGLTGVYLVHD---RAETFAAKGSP 139
Query: 135 APQMITTCDVISARALADLDTLLEYSFP 162
+ D+++ARA+A L L E P
Sbjct: 140 YREQF---DLVTARAVARLVVLGELCLP 164
>gi|227514197|ref|ZP_03944246.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
gi|227087429|gb|EEI22741.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
Length = 253
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------WIDLGSGGGFP 85
+Y L ++ ++ +NL + + + +++H DSL YP + D+G+G GFP
Sbjct: 36 YYQLLVQTNEHLNLTAITAETEVYLKHFYDSLT--GAFAYPKLQSQALTLCDIGAGAGFP 93
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQ 137
+ I +E V +++S NK+ +FL + V R + FA + +
Sbjct: 94 SLPLKIAFPQLE---VTIVDSLNKRINFLADLCDDLGLTGVHLVHDRAETFAAKGSPYRE 150
Query: 138 MITTCDVISARALADLDTLLEYSFP 162
D+++ARA+A L L E P
Sbjct: 151 QF---DLVTARAVARLVVLGELCLP 172
>gi|294674332|ref|YP_003574948.1| methyltransferase GidB [Prevotella ruminicola 23]
gi|294471908|gb|ADE81297.1| methyltransferase GidB [Prevotella ruminicola 23]
Length = 208
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWID 77
+S E ++ + L+ W+ KIN++S ++ + HV SL ++ P I +D
Sbjct: 13 LSDEQRQQFDALDALYRDWNTKINVISRKDIDQLYEHHVLHSLAIAKMINFRPGTRI-LD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVN 102
G+GGGFPG+ SI + L++
Sbjct: 72 FGTGGGFPGVPLSILFPECQFKLID 96
>gi|42519771|ref|NP_965701.1| glucose-inhibited division protein B [Lactobacillus johnsonii NCC
533]
gi|268320135|ref|YP_003293791.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
gi|55976462|sp|Q74HM3|RSMG_LACJO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|41584061|gb|AAS09667.1| glucose inhibited division protein B [Lactobacillus johnsonii NCC
533]
gi|262398510|emb|CAX67524.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
Length = 239
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------IDLGSGGGFP 85
+Y ++++KK+NL + + +++H DS + L +P ++ D+G+G GFP
Sbjct: 28 YYDKLVEFNKKVNLTRITDKNEVYLKHFFDS--ITPLLEFPDLFKGEKTLCDVGAGAGFP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQ---MITT 141
+ I ++ + +++S K+ FL +V + + R ++A Q +
Sbjct: 86 SLPIKILCPNLS---ITIVDSLGKRLKFLDELVNDLGLDKVTLVHSRAEDAGQNKDLREK 142
Query: 142 CDVISARALADLDTLLEYSFPW 163
D+++ RA+A + L EY P
Sbjct: 143 FDLVTGRAVARMSVLSEYCLPL 164
>gi|16804839|ref|NP_466324.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes EGD-e]
gi|47095609|ref|ZP_00233217.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|224502785|ref|ZP_03671092.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-561]
gi|254899740|ref|ZP_05259664.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J0161]
gi|254913057|ref|ZP_05263069.1| methyltransferase gidB [Listeria monocytogenes J2818]
gi|254937438|ref|ZP_05269135.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|255028091|ref|ZP_05300042.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes LO28]
gi|284800312|ref|YP_003412177.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284993497|ref|YP_003415265.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|20177887|sp|Q8Y3N3|RSMG_LISMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16412302|emb|CAD01015.1| GidB protein [Listeria monocytogenes EGD-e]
gi|47016039|gb|EAL06964.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|258610040|gb|EEW22648.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|284055874|gb|ADB66815.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284058964|gb|ADB69903.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|293591057|gb|EFF99391.1| methyltransferase gidB [Listeria monocytogenes J2818]
Length = 238
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S + +++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|206578596|ref|YP_002241279.1| methyltransferase GidB [Klebsiella pneumoniae 342]
gi|288937918|ref|YP_003441977.1| methyltransferase GidB [Klebsiella variicola At-22]
gi|290511658|ref|ZP_06551026.1| 16S rRNA methyltransferase GidB [Klebsiella sp. 1_1_55]
gi|226797826|sp|B5XZL6|RSMG_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|206567654|gb|ACI09430.1| methyltransferase GidB [Klebsiella pneumoniae 342]
gi|288892627|gb|ADC60945.1| methyltransferase GidB [Klebsiella variicola At-22]
gi|289775448|gb|EFD83448.1| 16S rRNA methyltransferase GidB [Klebsiella sp. 1_1_55]
Length = 207
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
+L + L KW+K NL S + +RH+ DS+ V PY S +ID+G+G G P
Sbjct: 23 QLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIVA---PYLQGSRFIDVGTGPGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
GI +I L++S K+ FLR V + R++ P V
Sbjct: 80 GIPLAIVRPESH---FTLLDSLGKRVRFLRQVQHELKLDNVTPVQSRVEAFPAEPPFDGV 136
Query: 145 ISARALADLDTLLEY 159
IS RA A L+ ++ +
Sbjct: 137 IS-RAFASLNDMVSW 150
>gi|260103056|ref|ZP_05753293.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
gi|260083146|gb|EEW67266.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
Length = 240
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVF-QLHPYPSIWIDLGSGGGFPG 86
YF FL ++ ++ +NL + + +++H DS L VF + + D+G+G GFP
Sbjct: 28 YFKFL-IEVNEHVNLTRITEENEVYLKHFYDSITPLFVFGDVFKDGATLCDVGAGAGFPS 86
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITTC 142
I I S++ V +++S K+ +FL+ ++ K ++ R ++ Q
Sbjct: 87 IPLKILKPSLK---VTIVDSLAKRLTFLKDLIAKLGLDNVELVHGRAEDVGQNKLYREKF 143
Query: 143 DVISARALADLDTLLEYSFPWL 164
D+++ARA+A + L EY P +
Sbjct: 144 DIVTARAVAKMSVLSEYCLPLV 165
>gi|284047379|ref|YP_003397719.1| methyltransferase GidB [Conexibacter woesei DSM 14684]
gi|283951600|gb|ADB54344.1| methyltransferase GidB [Conexibacter woesei DSM 14684]
Length = 245
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 58 HVEDSLRVFQLHPYPSIWI--DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
H+ DSL L + DLG+G GFPG+ ++ L + L+ES +K F+
Sbjct: 52 HLADSLVALALSDVSDARMIADLGAGAGFPGLPLAVALPEAN---IALVESIARKCGFIA 108
Query: 116 YVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V A R + + DV++ARALA L + EY+ P L +
Sbjct: 109 AAAASAGLTNVDVVAERAEAWADGMGRIDVVTARALAPLGVIAEYAAPLLRE 160
>gi|295678143|ref|YP_003606667.1| methyltransferase GidB [Burkholderia sp. CCGE1002]
gi|295437986|gb|ADG17156.1| methyltransferase GidB [Burkholderia sp. CCGE1002]
Length = 227
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPY-PSIWIDLGSGGGFP 85
KL + L KW+ NL + ++H+ DS+ + L P PS +D+GSGGG P
Sbjct: 35 KLLDYVALLAKWNNVYNLTAIRDPRQMLVQHILDSVSIVPHLAPRGPSSVLDVGSGGGMP 94
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFACRI---QEAPQM 138
GI+ +I L V + +KK +F Q A G V R+ Q ++
Sbjct: 95 GIVLAIVLPDWT---VTTNDIVHKKTAFQS---QAKAELGLANLSVVTGRVETLQPGAEV 148
Query: 139 ITTCDVISARALADL 153
DVI +RA A+L
Sbjct: 149 PAKFDVIVSRAFAEL 163
>gi|52426408|ref|YP_089545.1| glucose-inhibited division protein B [Mannheimia succiniciproducens
MBEL55E]
gi|81609342|sp|Q65Q00|RSMG_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52308460|gb|AAU38960.1| GidB protein [Mannheimia succiniciproducens MBEL55E]
Length = 213
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S + KL L KW+K NL S + I+H+ DS+ V PY ++ID+
Sbjct: 24 ISDQQKNKLVQLVLLLNKWNKAYNLTSVRDPMEMLIKHILDSVVV---SPYLQGDLFIDV 80
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE-AP 136
G+G G PG+ +I + + V L++S K+ SF+R V++ V R++E P
Sbjct: 81 GTGPGLPGLPLAI--INPDKNFV-LLDSLGKRISFIRNAVRELELSNVVPVLSRVEEYIP 137
Query: 137 QMITTCDVISARALADLDTLLEY 159
D I +RA A L + ++
Sbjct: 138 D--HKFDGILSRAFAILKDMTDW 158
>gi|116630298|ref|YP_815530.1| glucose-inhibited division protein B [Lactobacillus gasseri ATCC
33323]
gi|282852937|ref|ZP_06262278.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
gi|122272765|sp|Q040U0|RSMG_LACGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116095880|gb|ABJ61032.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus gasseri ATCC
33323]
gi|282556045|gb|EFB61666.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
Length = 239
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYPSI 74
+ +S + E+ +Y ++++KK+NL + + +++H DS L L
Sbjct: 15 FKLSNKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSITPLLEFSDLFKGEKS 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQ 133
D+G+G GFP + I + + +++S K+ FL ++ + + + R +
Sbjct: 75 LCDVGAGAGFPSLPIKILCPDLS---ITIVDSLGKRLKFLDELINDLSLDKVTLVHSRAE 131
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+A Q + D+++ RA+A + L EY P
Sbjct: 132 DAGQNKNLREKFDLVTGRAVARMSVLSEYCIPL 164
>gi|315925602|ref|ZP_07921812.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621143|gb|EFV01114.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 244
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S LEKL F ++ INL + F +H+ DSL L P ID+G
Sbjct: 25 SLSEGQLEKLYRFMESLKAVNEHINLTRITDDNAFVEKHLLDSL-ACPLTPADQRIIDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNK-----KASFLRYVVQKTAARGKVFACRIQE 134
+GGGFPGI +I + LV+ K K A ++ TAAR + +
Sbjct: 84 TGGGFPGIPLAIAYPQKQFVLVDATAKKVKAVEKIAADLGLANIELTAARAEALG----K 139
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
P D +RA+A L E P +
Sbjct: 140 NPAYRERFDAACSRAVAAYGILSELCLPLV 169
>gi|292490168|ref|YP_003533063.1| glucose-inhibited division protein GidB [Erwinia amylovora
CFBP1430]
gi|292901170|ref|YP_003540539.1| glucose-inhibited division protein B [Erwinia amylovora ATCC 49946]
gi|291201018|emb|CBJ48157.1| methyltransferase (glucose-inhibited division protein B) [Erwinia
amylovora ATCC 49946]
gi|291555610|emb|CBA24236.1| glucose-inhibited division protein GidB [Erwinia amylovora
CFBP1430]
gi|312174361|emb|CBX82614.1| glucose-inhibited division protein GidB [Erwinia amylovora ATCC
BAA-2158]
Length = 208
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 15 LLNTYNVSRETLEKLEYFYF--LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
LL T +S +K + + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 8 LLKTAGISLSDGQKHQLIGYVEMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLVG 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ID+G+G G PG+ +I L++S K+ FL+ V
Sbjct: 67 DRFIDVGTGPGLPGVPLAIVRPQAH---FTLLDSLGKRIRFLKQV 108
>gi|160331514|ref|XP_001712464.1| hypothetical protein HAN_2g321 [Hemiselmis andersenii]
gi|159765912|gb|ABW98139.1| hypothetical protein HAN_2g321 [Hemiselmis andersenii]
Length = 247
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVF------QLHPYPSIWIDLGSGGGFPGIITSIQL 93
+K INL+S T + + +H D+L + + + +D+G+G GFPG++ SI L
Sbjct: 58 NKYINLISKKTEFNIYRKHFLDTLTIVIFFKCFEKKKKKNACVDIGTGSGFPGLLLSILL 117
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMIT---TCDVISARA 149
L+ES KK+ F ++ + RI+ ++ D ++ARA
Sbjct: 118 PE---SFFLLVESIQKKSYFHGKIINFLFLNNSITLNSRIEGMGKLKEHRGNYDFLTARA 174
Query: 150 LADLDTLLEYSFPWL 164
+++++ L+++S P +
Sbjct: 175 VSEINPLIQFSCPLV 189
>gi|77461957|ref|YP_351464.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens Pf0-1]
gi|123602668|sp|Q3K431|RSMG_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77385960|gb|ABA77473.1| 16S rRNA m(7)G-527 methyltransferase [Pseudomonas fluorescens
Pf0-1]
Length = 214
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
+KW++ NL + ++ RH+ DSL V W+D+GSGGG PGI +I
Sbjct: 40 IKWNQAYNLTAVRDPDEMVSRHLLDSLSVMSFIEN-GRWLDVGSGGGMPGIPLAILYPDS 98
Query: 97 EGGLVNLIESKNKKASFLRYV 117
+ V ++S KK FL V
Sbjct: 99 Q---VTCLDSNGKKTRFLTQV 116
>gi|320095101|ref|ZP_08026810.1| methyltransferase GidB [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977968|gb|EFW09602.1| methyltransferase GidB [Actinomyces sp. oral taxon 178 str. F0338]
Length = 236
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F + + + L+ +E W RH+ +S V P +D+GSG G PGI+ ++
Sbjct: 52 FARMLEEEGELRGLLGPRDMERIWSRHLVNSAAVLDFLPRRGQVLDIGSGAGLPGIVIAV 111
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
++ V+L E ++ +L VV E + DV++ARA+A
Sbjct: 112 CRPDLD---VHLAEPMARRCEWLADVVDALGLDNTTIHQARAEELRGKGKADVVTARAVA 168
Query: 152 DLDTLLEYS 160
++ L+ +
Sbjct: 169 NMAKLVRMT 177
>gi|167571771|ref|ZP_02364645.1| methyltransferase GidB [Burkholderia oklahomensis C6786]
Length = 213
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + ++H+ DSL + + +D+GSGGG PGI+
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPHLGARGAAATALDVGSGGGLPGIV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I LS + V L + +KK++F + + G+V R+ +
Sbjct: 84 LAITLSEWQ---VTLNDIVHKKSAFQTQAKAELKLGNLSVVTGRVETLRL--GADVPGKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|114565205|ref|YP_752719.1| glucose-inhibited division protein B [Shewanella frigidimarina
NCIMB 400]
gi|114336498|gb|ABI73880.1| methyltransferase GidB [Shewanella frigidimarina NCIMB 400]
Length = 213
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 8 SILRANYLLNTY----NVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVED 61
S+L A L TY N+S L++ + F+ + KW+K NL + E IRHV D
Sbjct: 7 SVLSAQ--LKTYLAEMNMSATELQQKQLIGFVEMLDKWNKAYNLTAVRDPEQMLIRHVMD 64
Query: 62 SLRVFQLHPY--PSIWIDLGSGGGFPGIITSI 91
SL V PY +ID+G+G G PGI +I
Sbjct: 65 SLTV---SPYLEGQRFIDVGTGPGLPGIPLAI 93
>gi|167587940|ref|ZP_02380328.1| Glucose inhibited division protein [Burkholderia ubonensis Bu]
Length = 212
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 22 LDYVALLG-KWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDVGSGGGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMITTCD 143
I+ +I L + L ++++ K+ + R + + G+V +Q ++ D
Sbjct: 81 IVLAIVLPDWQITLNDIVQKKSAFQTQTRAELKLANLSVVTGRVET--LQPGVEVPEKFD 138
Query: 144 VISARALADLDTLLEYS 160
VI +RA ADL ++ +
Sbjct: 139 VIVSRAFADLSDFVKLA 155
>gi|210634759|ref|ZP_03298287.1| hypothetical protein COLSTE_02214 [Collinsella stercoris DSM 13279]
gi|210158699|gb|EEA89670.1| hypothetical protein COLSTE_02214 [Collinsella stercoris DSM 13279]
Length = 256
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQ 92
L + ++ +NL + + + HV DSL + P P ++D+G+G GFPGI ++
Sbjct: 52 LLVNQVNQYMNLTRIKDIHEALVLHVVDSLALTCDLPIEPERFLDMGTGAGFPGIPFAV- 110
Query: 93 LSSIEGGLVNLIESK-NKKASFLRYV----VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ EG L++ + K N +F+ + R + +A + EA + DV+ A
Sbjct: 111 YTGCEGILLDSVRKKVNAVNAFIDELGISNAHSVHERCESYA--LNEA----ASFDVVFA 164
Query: 148 RALADLDTLLEYSFPWL 164
RA+ ++ ++EY P+L
Sbjct: 165 RAVGQMNLIVEYGAPFL 181
>gi|227487668|ref|ZP_03917984.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227541378|ref|ZP_03971427.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092362|gb|EEI27674.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227182929|gb|EEI63901.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 205
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
W RH+ L+ +D+GSG G PG+ +I ++ V L+E K++ F
Sbjct: 44 LWDRHILPCALTESLYAEGKTVVDVGSGAGLPGVPLAIARPDLQ---VTLLEPLLKRSVF 100
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
LR V +K V R + + + D ++RA+A L L ++S P + +
Sbjct: 101 LREVAEKLGLE-NVHVARGRAEDKPVGKMDYATSRAVAPLWKLAKWSLPLVRK 152
>gi|239918802|ref|YP_002958360.1| glucose-inhibited division protein B [Micrococcus luteus NCTC 2665]
gi|281414971|ref|ZP_06246713.1| 16S rRNA methyltransferase GidB [Micrococcus luteus NCTC 2665]
gi|239840009|gb|ACS31806.1| glucose-inhibited division protein B [Micrococcus luteus NCTC 2665]
Length = 241
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + E + + L+ W RHV + V +L P ++ D+GSG G
Sbjct: 47 EALPRAEAYVAHLADTGIEWGLIGPREAPRLWERHVLNCAVVEELLPQGALVADVGSGAG 106
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG+ ++ + LIE ++ +L VV V R ++ +
Sbjct: 107 LPGLCLALARPDCQ---FLLIEPLERRVEWLDRVVADLGLENVDVIRGRAEQVSGNLDV- 162
Query: 143 DVISARALADLDTLLEYSFPWL 164
DV++ARA++ L TL+ + P L
Sbjct: 163 DVVTARAVSALKTLVPLTMPML 184
>gi|260592447|ref|ZP_05857905.1| 16S rRNA methyltransferase GidB [Prevotella veroralis F0319]
gi|260535493|gb|EEX18110.1| 16S rRNA methyltransferase GidB [Prevotella veroralis F0319]
Length = 207
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N++ E E+ L+ +W+ KIN++S +++ + HV SL + + + + +D
Sbjct: 11 NLTAEQEEQFNALNALYHEWNAKINVISRKDIDNLYEHHVLHSLAIAKFIKFCEGTNVLD 70
Query: 78 LGSGGGFPGIITSI 91
G+GGGFPGI +I
Sbjct: 71 FGTGGGFPGIPLAI 84
>gi|189039680|sp|A0K2M2|RSMG_ARTS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 216
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE E + + L+ V W RHV + + + S D+GSG G P
Sbjct: 20 LELAERYVEHLATSGTERGLIGPREVPRLWSRHVLNCAVIEREIARGSHVADVGSGAGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
G+ +I +E + LIE ++ +L+ VV V R + A M+ DV
Sbjct: 80 GLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLTNVTVMRTRAELAVGMV-NADV 135
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
++ARA++ L L + P L K
Sbjct: 136 VTARAVSALSNLAGLTIPLLGGK 158
>gi|329668022|gb|AEB93970.1| glucose inhibited division protein B [Lactobacillus johnsonii DPC
6026]
Length = 239
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--- 75
+ ++ + ++ +Y ++++KK+NL + + +++H DS + L +P ++
Sbjct: 15 FELNEKQQKQFATYYDKLVEFNKKVNLTRITDKNEVYLKHFFDS--ITPLLEFPDLFKGE 72
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACR 131
D+G+G GFP + I ++ + +++S K+ FL +V + + R
Sbjct: 73 KTLCDVGAGAGFPSLPIKILCPNLS---ITIVDSLGKRLKFLDELVNDLDLDKVTLVHSR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
++A Q + D+++ RA+A + L EY P
Sbjct: 130 AEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|163785694|ref|ZP_02180220.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
gi|159879038|gb|EDP73016.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
Length = 123
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
N +S + LE + + +LKW+ NL S E+ +H DSL + +L +I +
Sbjct: 16 NYIKISDKQLELFDKYLSFYLKWNNVYNLSSIRKKEEIVKKHFFDSLTLVKLFEKTNIEL 75
Query: 77 ------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D GSG GFPG+ I + ++LIE+ KK FL + ++
Sbjct: 76 RNKEVADFGSGAGFPGVPLKIYYEDLIN--LSLIEAVQKKCIFLEMLKKR 123
>gi|229822694|ref|YP_002884220.1| methyltransferase GidB [Beutenbergia cavernae DSM 12333]
gi|259495490|sp|C5C6N4|RSMG_BEUC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229568607|gb|ACQ82458.1| methyltransferase GidB [Beutenbergia cavernae DSM 12333]
Length = 212
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 29/149 (19%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F L + ++ L+ V W+RH+ +S V + P D+G+G G PG++ ++
Sbjct: 28 FGELLAEHGEERGLIGPREVPRLWLRHIVNSAAVARWLPDAGSVADVGTGAGLPGVVLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLR-------------YVVQKTAARGKVFACRIQEAPQM 138
++ V+L+E ++ ++L + VQ GK+ ++Q
Sbjct: 88 MRPDLD---VHLVEPMERRVAWLSELRDELDLDNVTLHQVQAQELHGKL---KVQ----- 136
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
++ARA+A L L ++ P L ++
Sbjct: 137 -----AVTARAVAPLGKLARWTLPLLSRR 160
>gi|116672709|ref|YP_833642.1| 16S rRNA methyltransferase GidB [Arthrobacter sp. FB24]
gi|116612818|gb|ABK05542.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter sp. FB24]
Length = 228
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 5/143 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE E + + L+ V W RHV + + + S D+GSG G P
Sbjct: 32 LELAERYVEHLATSGTERGLIGPREVPRLWSRHVLNCAVIEREIARGSHVADVGSGAGLP 91
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
G+ +I +E + LIE ++ +L+ VV V R + A M+ DV
Sbjct: 92 GLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLTNVTVMRTRAELAVGMV-NADV 147
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
++ARA++ L L + P L K
Sbjct: 148 VTARAVSALSNLAGLTIPLLGGK 170
>gi|317494635|ref|ZP_07953047.1| glucose inhibited division protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917237|gb|EFV38584.1| glucose inhibited division protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 206
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 24/143 (16%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
++L + L KW+K NL S ++ +RH+ DS+ V +P+ + +ID+G+G G
Sbjct: 22 QQLLGYVGLLDKWNKAYNLTSVRDPKEMLVRHILDSIVV---NPFLQGNRFIDVGTGPGL 78
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAP 136
PGI +I L++S K+ FLR V ++ +R + F + E P
Sbjct: 79 PGIPLAIVRPESH---FTLLDSLGKRVRFLRQVQHELKLTNIEPVQSRVEAF---LPEPP 132
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA A L +L +
Sbjct: 133 -----FDGVISRAFASLQDMLSW 150
>gi|290891984|ref|ZP_06554981.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
gi|290558578|gb|EFD92095.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
Length = 238
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|213966254|ref|ZP_03394438.1| 16S rRNA methyltransferase GidB [Corynebacterium amycolatum SK46]
gi|213951106|gb|EEB62504.1| 16S rRNA methyltransferase GidB [Corynebacterium amycolatum SK46]
Length = 227
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 31 YFYFLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
Y Y +L + L+ W RH+ +S V + + D+GSG G PGI
Sbjct: 38 YRYHSWLAEEATVRGLIGPRETPKLWDRHIINSAVVGEAIGKGLVVADIGSGAGLPGIPL 97
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKV--FACRIQEAPQMITT 141
++ ++ V L+E ++ +FL VV+ T RG+ A R + +
Sbjct: 98 ALARPDLK---VVLVEPLLRRTTFLNEVVKDLELDNVTVVRGRAEEKAVRAE-----VGQ 149
Query: 142 CDVISARALADLDTLLEYSFP 162
DV+++RA+A L L +S P
Sbjct: 150 VDVVTSRAVAPLGKLAGWSLP 170
>gi|225020857|ref|ZP_03710049.1| hypothetical protein CORMATOL_00865 [Corynebacterium matruchotii
ATCC 33806]
gi|224946339|gb|EEG27548.1| hypothetical protein CORMATOL_00865 [Corynebacterium matruchotii
ATCC 33806]
Length = 205
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L + E ++ L + W RH+ + + + D+GSG G
Sbjct: 10 DNLARAERYHDLLATTGAIRGFIGPRETPKLWDRHILNCAVLGEAIAAGLTVADIGSGAG 69
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQ 137
PGI +I + + L+E K+++FL VV + T RG+ ++ A
Sbjct: 70 LPGIPLAIARPDLT---IYLVEPLLKRSTFLTEVVHELGLENVTVIRGRAEEREVKAALG 126
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
++ DV+++RA+A L L +S P +
Sbjct: 127 LV---DVVTSRAVAPLGKLAGWSLPLV 150
>gi|118462827|ref|YP_884418.1| 16S rRNA methyltransferase GidB [Mycobacterium avium 104]
gi|189045860|sp|A0QND0|RSMG_MYCA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118164114|gb|ABK65011.1| methyltransferase GidB [Mycobacterium avium 104]
Length = 245
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V+ W RH+ +S V L ID+GSG G PGI +I + V L
Sbjct: 55 GLLGPREVDRIWDRHILNSAAVAGLLGRGDRIIDIGSGAGLPGIPLAIARPDL---EVVL 111
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISARALADLDTLLEYSF 161
+E +++ FL VV + +V R +E P D +RA+A LD L ++S
Sbjct: 112 LEPLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRNRFGDRDAAVSRAVAALDKLTKWSM 171
Query: 162 PWLYQ 166
P L
Sbjct: 172 PLLRH 176
>gi|310765905|gb|ADP10855.1| 16S rRNA methyltransferase GidB [Erwinia sp. Ejp617]
Length = 208
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + + KW+K NL S + +RH+ DS+ V + H +ID+G+G G PG
Sbjct: 22 QQLVGYVGMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLVGDRFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ +I L++S K+ FL+ V
Sbjct: 81 VPLAIVRPQAH---FTLLDSLGKRVRFLKQV 108
>gi|189040864|sp|Q07VT4|RSMG_SHEFN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 206
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 16 LNTYNVSRETLEKLEYFYFLFL--KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-- 71
L N+S L++ + F+ + KW+K NL + E IRHV DSL V PY
Sbjct: 10 LAEMNMSATELQQKQLIGFVEMLDKWNKAYNLTAVRDPEQMLIRHVMDSLTV---SPYLE 66
Query: 72 PSIWIDLGSGGGFPGIITSI 91
+ID+G+G G PGI +I
Sbjct: 67 GQRFIDVGTGPGLPGIPLAI 86
>gi|108802367|ref|YP_642564.1| 16S rRNA methyltransferase GidB [Mycobacterium sp. MCS]
gi|119866060|ref|YP_936012.1| methyltransferase GidB [Mycobacterium sp. KMS]
gi|122976256|sp|Q1B0S6|RSMG_MYCSS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045865|sp|A1U8R4|RSMG_MYCSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108772786|gb|ABG11508.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. MCS]
gi|119692149|gb|ABL89222.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. KMS]
Length = 225
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
Y FL ++ L+ + W RH+ +S + + D+GSG G PGI +
Sbjct: 24 YAEFLATAGVER-GLIGPRETDRIWDRHILNSAALGESVESGDRIADIGSGAGLPGIPLA 82
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM---ITTCDVISA 147
+ + V LIE ++ FL VV V R E P + + DV+++
Sbjct: 83 LARPDVH---VTLIEPMQRRCEFLTEVVDALGVAVIVVRGR-AENPAVRREVGEMDVVTS 138
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+ LD L +S L +
Sbjct: 139 RAVGSLDKLATWSMGILRE 157
>gi|253987527|ref|YP_003038883.1| 16S rRNA methyltransferase GidB [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253778977|emb|CAQ82137.1| methyltransferase GidB [Photorhabdus asymbiotica]
Length = 213
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQLSS 95
KW+K NL S E +RH+ DS+ V PY + ID+G+G G PGI +I
Sbjct: 40 KWNKTYNLTSVRDPEQMLVRHIMDSIIV---SPYLQGYRFIDVGTGPGLPGIPLAIVRPD 96
Query: 96 IEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQE---APQMITTCDVISARALA 151
L++S K+ FLR V + + A + R++E P D + +RA A
Sbjct: 97 SH---FTLLDSLGKRVRFLRQVQHELSLANIEPVQSRVEEYLSGPPF----DGVISRAFA 149
Query: 152 DLDTLLEY 159
L ++ +
Sbjct: 150 SLQDMVSW 157
>gi|254824832|ref|ZP_05229833.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|254851894|ref|ZP_05241242.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|254930924|ref|ZP_05264283.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|254992360|ref|ZP_05274550.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-064]
gi|255024123|ref|ZP_05296109.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J1-208]
gi|300763440|ref|ZP_07073438.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|258605190|gb|EEW17798.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|293582471|gb|EFF94503.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|293594074|gb|EFG01835.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|300515717|gb|EFK42766.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|328469139|gb|EGF40087.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 220]
gi|332313232|gb|EGJ26327.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes str. Scott A]
Length = 238
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|47093263|ref|ZP_00231034.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|47018337|gb|EAL09099.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|328468275|gb|EGF39281.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 1816]
Length = 238
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAVYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|299782734|gb|ADJ40732.1| Glucose inhibited division protein B [Lactobacillus fermentum CECT
5716]
Length = 245
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------WIDLGSGGGFP 85
+Y L ++ ++ +NL + + + +++H DSL YP + D+G+G GFP
Sbjct: 28 YYQLLVQTNEHLNLTAITAETEVYLKHFYDSLT--GAFAYPKLQSQALTLCDIGAGAGFP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQ 137
+ I +E V +++S NK+ +FL + V R + FA + +
Sbjct: 86 SLPLKIAFPQLE---VTIVDSLNKRINFLADLCDDLGLTGVXLVHDRAETFAAKGSPYRE 142
Query: 138 MITTCDVISARALADLDTLLEYSFP 162
D+++ARA+A L L E P
Sbjct: 143 QF---DLVTARAVARLVVLGELCLP 164
>gi|282860258|ref|ZP_06269329.1| 16S rRNA methyltransferase GidB [Prevotella bivia JCVIHMP010]
gi|282586991|gb|EFB92225.1| 16S rRNA methyltransferase GidB [Prevotella bivia JCVIHMP010]
Length = 208
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
++S + ++ Y L+ W+ KIN++S +++ + HV SL + ++ + + +D
Sbjct: 12 SLSEKQTKQFGMLYELYQDWNAKINVISRKDIDNLYEHHVLHSLAIAKMLHFKEGTNILD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
G+GGGFPGI +I +++ K K AS
Sbjct: 72 FGTGGGFPGIPLAIMFPEANFKMIDGTGKKIKVAS 106
>gi|226225352|ref|YP_002759459.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes Clip81459]
gi|259495498|sp|C1L0D6|RSMG_LISMC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225877814|emb|CAS06529.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. CLIP 80459]
Length = 238
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWI 76
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ + +I
Sbjct: 16 ELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTIC- 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRI 132
D+G+G GFP + I ++ V++++S K+ +FL + +K F A
Sbjct: 75 DVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETF 131
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ D+++ARA+A + L E P +
Sbjct: 132 GQNKAHREKYDLVTARAVARMSVLSELCMPLV 163
>gi|293602668|ref|ZP_06685109.1| glucose-inhibited cell division protein B [Achromobacter piechaudii
ATCC 43553]
gi|292818859|gb|EFF77899.1| glucose-inhibited cell division protein B [Achromobacter piechaudii
ATCC 43553]
Length = 237
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 25/147 (17%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---------PSIWIDL 78
KL + +W++ NL + + I+H+ DSL + P+ + D+
Sbjct: 34 KLLNYLAQMQRWNRTYNLTAIRDPQQMLIQHLFDSLSA--VAPFCEALGASGTSAKVYDV 91
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSGGG PG++ +I + V I++ KK +F+R + G + +Q
Sbjct: 92 GSGGGLPGVVLAIMQPAWS---VTCIDAVEKKTAFVRQM------SGALSLPNLQARHAR 142
Query: 139 ITT-----CDVISARALADLDTLLEYS 160
I T CD++++RA A LD + +
Sbjct: 143 IETLEPAECDIVTSRAFASLDDFAQLA 169
>gi|195953331|ref|YP_002121621.1| glucose inhibited division protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932943|gb|ACG57643.1| glucose inhibited division protein [Hydrogenobaculum sp. Y04AAS1]
Length = 176
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPGIITSIQLS 94
LKW+K L+S + + RH++D+ +F +L + I D+G+G GF G++ SI
Sbjct: 15 LKWNKVHKLISKADESKIFERHIKDAEEIFYKLKDFDIKEIADVGAGAGFLGVVFSILDK 74
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
++ V+LIE KK +FL ++ K +V C+ +A ++ T + RA
Sbjct: 75 DLK---VSLIEVVAKKCAFLEHIKVKLGLNYEVL-CK--DATRLEKTFEATIERAFG 125
>gi|313159131|gb|EFR58506.1| 16S rRNA methyltransferase GidB [Alistipes sp. HGB5]
Length = 207
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGF 84
++ Y L+ W+ KIN+VS + ++RHV SL + ++ + + +D+G GGGF
Sbjct: 17 QRFAALYDLYADWNAKINVVSRKDFDQLYLRHVLHSLAIAKVCAFDAGARILDVGCGGGF 76
Query: 85 PGIITSIQLSSIEGGLVNLIESK 107
P + +I V+ I K
Sbjct: 77 PSVPLAILFPEARFTAVDSIRKK 99
>gi|291303912|ref|YP_003515190.1| methyltransferase GidB [Stackebrandtia nassauensis DSM 44728]
gi|290573132|gb|ADD46097.1| methyltransferase GidB [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + +L + +D+GSG G PG++ +I + +V L
Sbjct: 40 GLIGPREVPRLWERHLLNCAVLGELIEPEADVLDIGSGAGLPGLVLAIVRPDV---VVTL 96
Query: 104 IESKNKKASFLRYVVQKTAARG----KVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+E ++ FL + T A G +V R +E + DV+++RA+A L L +
Sbjct: 97 VEPMARRTEFL---TEATEALGLDNVEVLRARAEEV-KPRGRADVVTSRAVAPLGKLSHW 152
Query: 160 SFP 162
P
Sbjct: 153 CLP 155
>gi|261341603|ref|ZP_05969461.1| hypothetical protein ENTCAN_08065 [Enterobacter cancerogenus ATCC
35316]
gi|288315954|gb|EFC54892.1| 16S rRNA methyltransferase GidB [Enterobacter cancerogenus ATCC
35316]
Length = 207
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
KW+K NL S + IRH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 33 KWNKAYNLTSVRDPNEMLIRHILDSIVVA---PYLKGERFIDVGTGPGLPGIPLSIVRPE 89
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
L++S K+ FLR V + R++ P VIS RA A L+
Sbjct: 90 SH---FTLLDSLGKRIRFLRQVQHELKLENITPVQSRVEAFPAEPPFDGVIS-RAFASLN 145
Query: 155 TLLEY 159
++ +
Sbjct: 146 DMVSW 150
>gi|259910325|ref|YP_002650681.1| 16S rRNA methyltransferase GidB [Erwinia pyrifoliae Ep1/96]
gi|224965947|emb|CAX57480.1| Methyltransferase (Glucose-inhibited division protein B) [Erwinia
pyrifoliae Ep1/96]
gi|283480448|emb|CAY76364.1| glucose-inhibited division protein GidB [Erwinia pyrifoliae DSM
12163]
Length = 208
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L + + KW+K NL S + +RH+ DS+ V + H +ID+G+G G PG
Sbjct: 22 QQLVGYVGMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLVGDRFIDVGTGPGLPG 80
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ +I L++S K+ FL+ V
Sbjct: 81 VPLAIVRPQAH---FTLLDSLGKRVRFLKQV 108
>gi|330040660|ref|XP_003239986.1| glucose-inhibited division protein B [Cryptomonas paramecium]
gi|327206912|gb|AEA39088.1| glucose-inhibited division protein B [Cryptomonas paramecium]
Length = 251
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI--------DLGSGGGFPGIITSIQLSS 95
NL+S+ ++E F+ H+ DSL + ++WI D+G+G GFPGII SI L
Sbjct: 75 NLISTRSLEIFYKTHLVDSLTL--TSTLSALWIIRKKRFYIDIGTGNGFPGIILSIILPK 132
Query: 96 IEGGLVNLIESKNKKASF----LRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
LI+ KK +F L ++ K + + ++ + C +I RA+
Sbjct: 133 ---CFFFLIDPTKKKVNFHYLTLLFLGLKNSKILLLKTNQLCKIKIFYNPCSIILTRAIC 189
Query: 152 DLDTLLEYSFPWLYQKK 168
+ L + F +L QK+
Sbjct: 190 KIVLLFDICF-FLIQKE 205
>gi|37524080|ref|NP_927424.1| glucose-inhibited division protein B [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|55976478|sp|Q7NA87|RSMG_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|36783503|emb|CAE12343.1| Glucose inhibited division protein B [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 206
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+S + ++L + + KW+K NL S E +RH+ DS+ V Q H + ID
Sbjct: 16 LSLQQKQQLVAYVDMLNKWNKAYNLTSVREPEQMLVRHIMDSIVVSPYLQGHRF----ID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+G+G G PGI +I L++S K+ FLR V
Sbjct: 72 VGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQV 108
>gi|257468581|ref|ZP_05632675.1| glucose inhibited division protein B [Fusobacterium ulcerans ATCC
49185]
gi|317062838|ref|ZP_07927323.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
ulcerans ATCC 49185]
gi|313688514|gb|EFS25349.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
ulcerans ATCC 49185]
Length = 233
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGSGGGFPGIITSIQL 93
L +++ NL + + +H DSL + L S ID+G+G GFPG++ +I
Sbjct: 30 LLTEYNSHTNLTALRDEKSIIEKHFLDSLLLQNLIKRESKKAIDIGTGAGFPGMVLAIFN 89
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-----TCDVISAR 148
IE L++S KK FL V K R A IT T D+ R
Sbjct: 90 PDIE---FTLMDSIGKKTKFLELV--KENLRLDNVNVVTSRAEDYITDGNRQTYDLGLCR 144
Query: 149 ALADLDTLLEYSFPWL 164
++ L T+LEY P+L
Sbjct: 145 GVSKLSTILEYIIPFL 160
>gi|149925398|ref|ZP_01913662.1| glucose-inhibited division protein B [Limnobacter sp. MED105]
gi|149825515|gb|EDM84723.1| glucose-inhibited division protein B [Limnobacter sp. MED105]
Length = 225
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-------QLHPYPSIWIDLGSGGGFPGI 87
L KW++ NL + + H+ DSL V Q P I +D+G+G G PG+
Sbjct: 46 LIQKWNRVYNLTAIRNNRELITHHLLDSLAVLPEIAFALQATSSPRI-LDVGAGAGLPGL 104
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVIS 146
+ +I + + + LI++ KKA+F++ + + + R++E Q D+I
Sbjct: 105 VLAIAQPNWQ---ITLIDTVQKKAAFMQQAIATLGLKNAQAVHGRVEEF-QADVPFDLIC 160
Query: 147 ARALADLDTLLEYS 160
+RA + ++ + S
Sbjct: 161 SRAFSSIENFIALS 174
>gi|158520421|ref|YP_001528291.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
gi|158509247|gb|ABW66214.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
Length = 490
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S L++L ++ L K + ++NL E+ ++ DS+ L PS +DLG+
Sbjct: 32 LSDAGLKQLWSYHCLLRKHNPELNLTRIHNFENMVLKLYVDSILPGTLVDLPSPLLDLGT 91
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
G G PGI I + V L E + K+ +FL VQ+
Sbjct: 92 GPGMPGIPLKIAFPELT---VLLAEGRGKRVAFLNTAVQE 128
>gi|260221688|emb|CBA30503.1| Ribosomal RNA small subunit methyltransferase G [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 224
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 27/142 (19%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-----QLHPY---------PSI 74
LEY L KW+K NL + ++ H+ DSL V QL P +
Sbjct: 29 LEYLA-LIQKWTKVYNLTAVRNPDEMLTHHLLDSLAVIAPLQKQLAALKEQGVFGDKPRL 87
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV---VQKTAARGKVFACR 131
+D+GSG G PGI+ +I I V+ +++ KKA+F++ V ++ RG R
Sbjct: 88 -LDVGSGAGLPGIVIAICCPHIT---VHCVDTVAKKAAFIQQVAVTLKLPNLRG--IHAR 141
Query: 132 IQEAPQMITTCDVISARALADL 153
++ + DV+S+RA A L
Sbjct: 142 VES---LTEPYDVVSSRAFASL 160
>gi|203284098|ref|YP_002221838.1| glucose inhibited division protein B [Borrelia duttonii Ly]
gi|226795818|sp|B5RL03|RSMG_BORDL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|201083541|gb|ACH93132.1| glucose inhibited division protein B [Borrelia duttonii Ly]
Length = 210
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQL--HPYPSIWI 76
N + E ++KL ++ L +S + NLVS++ D + H DS+ + P +
Sbjct: 15 NFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVSGLPIVKDKNPRQVL 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG GFPGI+ ++ + L+E NKKA FL+ + + +V ++E
Sbjct: 75 DVGSGAGFPGIVLALFDRCRK---YVLLERSNKKAIFLKMISLELGLENVEVLEHNVEEE 131
Query: 136 PQMITTCDVISARALADL 153
+ I+ RA D+
Sbjct: 132 Q---NKYEFITIRAFGDI 146
>gi|71065878|ref|YP_264605.1| 16S rRNA methyltransferase GidB [Psychrobacter arcticus 273-4]
gi|123648423|sp|Q4FS37|RSMG_PSYA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71038863|gb|AAZ19171.1| probable glucose inhibited division protein [Psychrobacter arcticus
273-4]
Length = 238
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
W+K NL + + + I+HV D L + P S+ +D+G+G G P +I I + E
Sbjct: 67 WNKAYNLTAITDPVEALIKHVIDCLAIITHLPSGSL-LDIGTGAGLPAVI--IAICQPER 123
Query: 99 GLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L +S KK F++ + + + + A RI EA ++ + DV+++RA A L +
Sbjct: 124 SCTAL-DSNQKKIRFIKQISSELGLSNMQPIASRI-EAHEV--SYDVVTSRAFASLIDFV 179
Query: 158 EYSFPWL 164
E + P L
Sbjct: 180 EVAQPRL 186
>gi|149911788|ref|ZP_01900392.1| glucose-inhibited division protein B [Moritella sp. PE36]
gi|149805134|gb|EDM65156.1| glucose-inhibited division protein B [Moritella sp. PE36]
Length = 206
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
L KW+K NL S E+ I+H+ DSL V PY +ID+G+G G PG+ +I
Sbjct: 30 LLHKWNKAYNLTSVRDPENMLIKHIMDSLVV---SPYLEGERFIDVGTGPGLPGLPLAIM 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE-APQMITTCDVISARAL 150
E L++S K+ F+ V + R++E P++ D + +RA
Sbjct: 87 NPDKE---FVLLDSLGKRIRFVTQAVHELKLTNVTPVQSRVEEYHPEI--KFDGVLSRAF 141
Query: 151 ADLDTLLEY 159
A L+ +L +
Sbjct: 142 ASLEDMLHW 150
>gi|295693715|ref|YP_003602325.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
crispatus ST1]
gi|295031821|emb|CBL51300.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus ST1]
Length = 240
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYP 72
+ + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+ +
Sbjct: 13 HNFKLTDQQIEQFKIYFNYLIEVNENVNLTRITEEDEVYLKHFYDSITPLFTFGDVFKDG 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ D+G+G GFP I I ++ + +++S K+ +FL+ ++ K + ++ R
Sbjct: 73 ATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITKLDLKDVELVHGR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q D+++ARA+A + L EY P +
Sbjct: 130 AEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLV 165
>gi|227879182|ref|ZP_03997054.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256849430|ref|ZP_05554862.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|262046097|ref|ZP_06019060.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|312976919|ref|ZP_07788668.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
gi|227861185|gb|EEJ68832.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256713546|gb|EEU28535.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|260573427|gb|EEX29984.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|310896247|gb|EFQ45312.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
Length = 240
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYP 72
+ + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+ +
Sbjct: 13 HNFKLTDQQIEQFKIYFNYLIEVNEHVNLTRITEEDEVYLKHFYDSITPLFTFGDVFKDG 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ D+G+G GFP I I ++ + +++S K+ +FL+ ++ K + ++ R
Sbjct: 73 ATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITKLDLKDVELVHGR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q D+++ARA+A + L EY P +
Sbjct: 130 AEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLV 165
>gi|254250983|ref|ZP_04944301.1| Glucose inhibited division protein [Burkholderia dolosa AUO158]
gi|124893592|gb|EAY67472.1| Glucose inhibited division protein [Burkholderia dolosa AUO158]
Length = 228
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPQQMMIQHILDSLSIVPHLRARESARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMITTCD 143
I+ +I L ++++ K+ + +R + + G+V + +Q + D
Sbjct: 97 IVLAIVRPDWHVTLNDIVQKKSAFQTQMRAELKLANLSVVTGRVES--LQPGVDVPEKFD 154
Query: 144 VISARALADL 153
VI +RA ADL
Sbjct: 155 VIVSRAFADL 164
>gi|256844007|ref|ZP_05549494.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|293380690|ref|ZP_06626739.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
gi|256613912|gb|EEU19114.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|290922730|gb|EFD99683.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
Length = 240
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYP 72
+ + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+ +
Sbjct: 13 HNFKLTDQQIEQFKIYFNYLIEVNEHVNLTRITEEDEVYLKHFYDSITPLFTFGDVFKDG 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ D+G+G GFP I I ++ + +++S K+ +FL+ ++ K + ++ R
Sbjct: 73 ATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITKLDLKDVELVHGR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q D+++ARA+A + L EY P +
Sbjct: 130 AEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLV 165
>gi|227889290|ref|ZP_04007095.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
gi|227850092|gb|EEJ60178.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
Length = 239
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--- 75
+ ++ + ++ +Y ++++KK+NL + +++H DS + L +P ++
Sbjct: 15 FELNEKQTKQFATYYDKLIEFNKKVNLTRIIDKNEVYLKHFFDS--ITPLLEFPDLFKGE 72
Query: 76 ---IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACR 131
D+G+G GFP + I ++ + +++S K+ FL +V + + R
Sbjct: 73 KTLCDVGAGAGFPSLPIKILCPNLS---ITIVDSLGKRLKFLDELVNDLGLDKVTLVHSR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
++A Q + D+++ RA+A + L EY P
Sbjct: 130 AEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|254496642|ref|ZP_05109505.1| glucose inhibited division protein B [Legionella drancourtii
LLAP12]
gi|254354070|gb|EET12742.1| glucose inhibited division protein B [Legionella drancourtii
LLAP12]
Length = 209
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + FL KW+ NL + +E +H+ DSL + I ID+G+G G PGI
Sbjct: 26 QLSNYLFLLKKWNAAYNLTAVRDLESMISKHLLDSLAILPWVNGRHI-IDVGTGPGLPGI 84
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
+I + E V L++S KK FL V ++ + +V R+ E D +
Sbjct: 85 PLAI--AKPEQNFV-LLDSNGKKTRFLNEVKRQLHLKNLEVVHFRV-ENYHPTQGFDTVV 140
Query: 147 ARALADLDTLLEYS 160
+RA + L +++++
Sbjct: 141 SRAFSSLAQMVQWT 154
>gi|257455183|ref|ZP_05620418.1| 16S rRNA methyltransferase GidB [Enhydrobacter aerosaccus SK60]
gi|257447145|gb|EEV22153.1| 16S rRNA methyltransferase GidB [Enhydrobacter aerosaccus SK60]
Length = 215
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
W+K NL + + I+H+ DSL + P + +D+G+G G P +I +I
Sbjct: 48 WNKAYNLTAIKDDQQALIKHIFDSLSIVPFLPAGDL-LDIGTGAGLPAVIVAI---CQPQ 103
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLL 157
V ++S KK F++ V + + A RI EA + T VI++RA A L +
Sbjct: 104 RAVTALDSNQKKIRFIKQVASELGLKNLTPVASRI-EAHE--GTYQVITSRAFASLVDFV 160
Query: 158 EYS 160
+S
Sbjct: 161 THS 163
>gi|332286172|ref|YP_004418083.1| glucose inhibited division protein B [Pusillimonas sp. T7-7]
gi|330430125|gb|AEC21459.1| glucose inhibited division protein B [Pusillimonas sp. T7-7]
Length = 223
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----------IDLGSGGGFPGI 87
+W+K NL + E ++H+ DSL + + P I +D+GSG G PG+
Sbjct: 38 RWNKTYNLTALRDPEQMLVQHLIDSLSIVK--PISKILDKNTVTENTVVDVGSGAGLPGV 95
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
+ +I + V+ I++ KK +F+R V R + R++ P D++
Sbjct: 96 VLAIMQPDWQ---VHCIDAVEKKMAFVRQVSGVLRLRNLQAHHKRVESMPPY--QADIVV 150
Query: 147 ARALADL 153
+RA A L
Sbjct: 151 SRAFASL 157
>gi|262273122|ref|ZP_06050939.1| ribosomal RNA small subunit methyltransferase G [Grimontia hollisae
CIP 101886]
gi|262222878|gb|EEY74186.1| ribosomal RNA small subunit methyltransferase G [Grimontia hollisae
CIP 101886]
Length = 204
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIWI 76
+ + +KL + + KW+K NL S D ++H+ DS+ V + H Y I
Sbjct: 15 QIPADQQDKLIGYVEMLHKWNKAYNLTSVRDPNDMIVKHIMDSIVVSEYLDGHHY----I 70
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G G PGI +I ++ ++ L++S K+ F+R V+ +
Sbjct: 71 DVGTGPGLPGIPLAI-INPVKS--FTLLDSLGKRIRFIRQVLHE 111
>gi|268679017|ref|YP_003303448.1| methyltransferase GidB [Sulfurospirillum deleyianum DSM 6946]
gi|268617048|gb|ACZ11413.1| methyltransferase GidB [Sulfurospirillum deleyianum DSM 6946]
Length = 189
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI- 74
+ +Y + + E F L L++++ N+ + T E ++++EDS+ Q ++
Sbjct: 1 MASYTLPAHFWDAAEQFATLLLQYNQTHNISGAKTKEAV-MKNIEDSIYPLQFLHVTTMK 59
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--R 131
ID+G+G GFPG++ ++ L + L E KK++FL ++ + V C R
Sbjct: 60 RGIDVGTGAGFPGLLLALALPHMH---FTLFEPIAKKSAFL-HLAKSALELYNVDVCTNR 115
Query: 132 IQEAPQMITTCDVISARALADLDTLLE 158
+++AP D+IS+RA+ + L++
Sbjct: 116 VEKAPSF--EADLISSRAVTNTKVLIK 140
>gi|270158241|ref|ZP_06186898.1| methyltransferase GidB [Legionella longbeachae D-4968]
gi|289163503|ref|YP_003453641.1| glucose inhibited division protein B GidB [Legionella longbeachae
NSW150]
gi|269990266|gb|EEZ96520.1| methyltransferase GidB [Legionella longbeachae D-4968]
gi|288856676|emb|CBJ10487.1| putative glucose inhibited division protein B GidB [Legionella
longbeachae NSW150]
Length = 208
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + FL KW+ NL + VE +H+ DSL + I ID+G+G G PGI
Sbjct: 27 LSDYLFLLNKWNAAYNLTAIRDVEAMVGKHILDSLAILPWLKGNRI-IDVGTGAGLPGI- 84
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
+ L+ E V L++S KK FL V ++ ++ R+ E D + +
Sbjct: 85 -PLALAKPEINFV-LLDSNGKKTRFLNEVKRQLNLENLEIVQIRV-ENYHPTQGFDTVLS 141
Query: 148 RALADLDTLLEYS 160
RA + L +++++
Sbjct: 142 RAFSSLGQMIQWT 154
>gi|206558429|ref|YP_002229189.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia J2315]
gi|238693059|sp|B4E582|RSMG_BURCJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|198034466|emb|CAR50331.1| methyltransferase GidB [Burkholderia cenocepacia J2315]
Length = 228
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPKQMLIQHILDSLSIVPHLRGRTSARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMITTCD 143
I+ +I + L ++++ K+ + +R +V + G+V + +Q ++ D
Sbjct: 97 IVLAIVEPGWQVTLNDIVQKKSAFQTQMRAELKLVNLSVVTGRVES--LQPGVEVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|315039148|ref|YP_004032716.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325957619|ref|YP_004293031.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|312277281|gb|ADQ59921.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325334184|gb|ADZ08092.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|327184264|gb|AEA32711.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1118]
Length = 240
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 83/159 (52%), Gaps = 17/159 (10%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW- 75
+ + ++ + ++ + ++ + ++ ++ +NL + ++ +++H DS + L + +++
Sbjct: 13 HNFELTDKQKQQFKLYFKMLIEVNEHVNLTRITEEDEVYLKHFYDS--ITPLFTFGAVFK 70
Query: 76 -----IDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARG-KVF 128
D+G+G GFP SI L ++ GL V +++S K+ +FL+ ++ + ++
Sbjct: 71 DGATLCDVGAGAGFP----SIPLKILKPGLKVTIVDSLQKRLNFLKDLISELGLTDVELV 126
Query: 129 ACRIQEAPQMI---TTCDVISARALADLDTLLEYSFPWL 164
R ++ Q D+++ARA+A + L EY P +
Sbjct: 127 HGRAEDVGQNKLYRERFDIVTARAVARMSVLSEYCLPLV 165
>gi|268318295|ref|YP_003292014.1| glucose inhibited division protein [Rhodothermus marinus DSM 4252]
gi|262335829|gb|ACY49626.1| glucose inhibited division protein [Rhodothermus marinus DSM 4252]
Length = 239
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGF 84
E+LE++ L + + NLVS T+ + RH+ L P+P S+ +D G+GGG
Sbjct: 35 EQLEHYARLLQELGRHHNLVSRETLPELHRRHLLHCL-ALTWRPFPPGSVVVDWGTGGGL 93
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P + +I + V+ +++ KK +R + ++
Sbjct: 94 PAVPLAIAFPEVT---VHAVDAAQKKVLAVRTMARR 126
>gi|256823851|ref|YP_003147814.1| methyltransferase GidB [Kangiella koreensis DSM 16069]
gi|256797390|gb|ACV28046.1| methyltransferase GidB [Kangiella koreensis DSM 16069]
Length = 214
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 9/142 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGS 80
S+E E+L + L LKW+K NL + + ++ H+ DS+ V + Y S+ +D+G+
Sbjct: 24 SKEESERLLNYLSLLLKWNKAFNLTAITNPKEALDLHLLDSVAVSPAIKDYSSL-LDVGT 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQM 138
GGG PGI +I + L+++ +KK FL+ VV + V R+Q+ Q
Sbjct: 83 GGGLPGIPLAILNPEKQ---FTLLDTNSKKTRFLKQVVYELGLNNVTVINQRVQDFENQS 139
Query: 139 ITTCDVISARALADLDTLLEYS 160
C I +RA A L +++++
Sbjct: 140 GYAC--ILSRAFASLSDMVQWT 159
>gi|254509067|ref|ZP_05121170.1| methyltransferase GidB [Vibrio parahaemolyticus 16]
gi|219548000|gb|EED25022.1| methyltransferase GidB [Vibrio parahaemolyticus 16]
Length = 210
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S E+ ++H+ DS+ + H +ID+G+G G PGI +I
Sbjct: 36 KWNKAYNLTSVRDPEEMLVKHILDSI-IVSTHLQGERFIDVGTGPGLPGIPLAIMCPDKH 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE-APQMITTCDVISARALADL 153
+L++S K+ F++ + + + R++E PQ D + +RA A +
Sbjct: 95 ---FHLLDSLGKRIRFIKQALHELKIENVMPIQSRVEEFQPQ--EKFDAVLSRAFASM 147
>gi|254818673|ref|ZP_05223674.1| 16S rRNA methyltransferase GidB [Mycobacterium intracellulare ATCC
13950]
Length = 246
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 42 QRYATLLAGAGVERGLLGPREVDRIWDRHILNSAAVAELLGAGERVIDIGSGAGLPGIPL 101
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I + V L+E +++ FL VV + +V R +E + D +
Sbjct: 102 AIARPDL---EVVLLEPLLRRSEFLNEVVDELGLAVEVVRGRAEEPGVRDRFGSRDAAVS 158
Query: 148 RALADLDTLLEYSFPWL 164
RA+A LD L ++S P L
Sbjct: 159 RAVAALDKLTKWSMPLL 175
>gi|126176557|ref|YP_001052706.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS155]
gi|153002871|ref|YP_001368552.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS185]
gi|160877618|ref|YP_001556934.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS195]
gi|217975458|ref|YP_002360209.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS223]
gi|304412697|ref|ZP_07394300.1| methyltransferase GidB [Shewanella baltica OS183]
gi|307305838|ref|ZP_07585584.1| methyltransferase GidB [Shewanella baltica BA175]
gi|166224611|sp|A3DAS4|RSMG_SHEB5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224612|sp|A6WUK0|RSMG_SHEB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040823|sp|A9KX16|RSMG_SHEB9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766901|sp|B8EDW0|RSMG_SHEB2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125999762|gb|ABN63837.1| methyltransferase GidB [Shewanella baltica OS155]
gi|151367489|gb|ABS10489.1| methyltransferase GidB [Shewanella baltica OS185]
gi|160863140|gb|ABX51674.1| methyltransferase GidB [Shewanella baltica OS195]
gi|217500593|gb|ACK48786.1| methyltransferase GidB [Shewanella baltica OS223]
gi|304348907|gb|EFM13322.1| methyltransferase GidB [Shewanella baltica OS183]
gi|306911331|gb|EFN41757.1| methyltransferase GidB [Shewanella baltica BA175]
gi|315269816|gb|ADT96669.1| methyltransferase GidB [Shewanella baltica OS678]
Length = 206
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E ++L F + KW+K NL S E IRH+ DSL V H +ID+G+G G
Sbjct: 20 EQKKQLIDFVGMLNKWNKAYNLTSVRDPEAMLIRHIMDSL-VVSKHLQGERFIDVGTGPG 78
Query: 84 FPGIITSI 91
PGI +I
Sbjct: 79 LPGIPLAI 86
>gi|59713181|ref|YP_205957.1| glucose-inhibited division protein B [Vibrio fischeri ES114]
gi|197334215|ref|YP_002157361.1| 16S rRNA methyltransferase GidB [Vibrio fischeri MJ11]
gi|75431404|sp|Q5E1M7|RSMG_VIBF1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|59481282|gb|AAW87069.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Vibrio fischeri
ES114]
gi|197315705|gb|ACH65152.1| 16S rRNA methyltransferase GidB [Vibrio fischeri MJ11]
Length = 210
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----W 75
NVS E+L + L KW+K NL S + I+H+ DS+ V P + +
Sbjct: 18 NVSELQKEQLLGYVALLHKWNKAYNLTSVRNPSEMVIKHILDSIVV-----SPKLSGERF 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G G PGI +I L++S K+ F++ V+ + R++E
Sbjct: 73 IDVGTGPGLPGIPLAIMNPEKS---FTLLDSLGKRIRFIKQVIHELKITNVTPIQSRVEE 129
Query: 135 APQMITTCDVISARALADLDTLLEY 159
Q D + +RA A + ++ +
Sbjct: 130 F-QPEEKFDAVLSRAFASMTDMVNW 153
>gi|119947333|ref|YP_945013.1| methyltransferase GidB [Psychromonas ingrahamii 37]
gi|189040711|sp|A1T0Z9|RSMG_PSYIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119865937|gb|ABM05414.1| methyltransferase GidB [Psychromonas ingrahamii 37]
Length = 207
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
L KW+K NL S E ++H+ DS+ V PY +ID+G+G G PG+ +I
Sbjct: 32 LLNKWNKAYNLTSVRDPEQMLVKHIMDSIVV---SPYLIGERFIDVGTGPGLPGLPLAIL 88
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
+ L++S K+ F+R + + + R++E Q DV+ +RA A
Sbjct: 89 NPDKQ---FVLLDSLGKRLRFIRQALLELGLKNVTAVQSRVEEY-QPEHKFDVVLSRAFA 144
Query: 152 DLDTLL 157
L +L
Sbjct: 145 SLHDML 150
>gi|329118277|ref|ZP_08246987.1| glucose inhibited division protein B [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465698|gb|EGF11973.1| glucose inhibited division protein B [Neisseria bacilliformis ATCC
BAA-1200]
Length = 210
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+ NL + H+ DSL + + ID+GSGGG PGI ++ +
Sbjct: 35 KWNAAFNLTALRDRAKMVSHHLLDSLTLLPYLDGAATLIDVGSGGGMPGIPAAVCRPDLA 94
Query: 98 GGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALA 151
V L ++ KK +FL+ + + A G+V ++A D++S+RA A
Sbjct: 95 ---VTLCDANTKKTAFLQQAAIELGLDNVSVAAGRVEKLAGKQA-------DIVSSRAFA 144
Query: 152 DL 153
+L
Sbjct: 145 EL 146
>gi|323527851|ref|YP_004230004.1| methyltransferase GidB [Burkholderia sp. CCGE1001]
gi|323384853|gb|ADX56944.1| methyltransferase GidB [Burkholderia sp. CCGE1001]
Length = 238
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSI 74
+S L KL + L KW+ NL + I+H+ DSL + P+ P
Sbjct: 27 ELSDTQLAKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIV---PHLAERNPRS 83
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVFAC 130
+D+GSGGG PGI+ +I V + + +KK +F Q A G V
Sbjct: 84 VLDVGSGGGLPGIVLAIVRPDCA---VTVNDIVHKKTAFQ---AQAKAELGLGNLSVVTG 137
Query: 131 RI---QEAPQMITTCDVISARALADL 153
R+ Q ++ DVI +RA A+L
Sbjct: 138 RVETLQPGAEVSAKFDVIVSRAFAEL 163
>gi|111226211|ref|YP_717005.1| 16S rRNA methyltransferase GidB [Frankia alni ACN14a]
gi|122953628|sp|Q0RAP0|RSMG_FRAAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|111153743|emb|CAJ65501.1| Methyltransferase gidB (Glucose inhibited division protein B)
(partial match) [Frankia alni ACN14a]
Length = 262
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L E F L + L+ + W RHV + + ++ P + +D+GSG G P
Sbjct: 19 LAAAERFTELLATAGVERGLIGPRETDRLWERHVINCGVLAEVVPEGADAVDVGSGAGLP 78
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD-- 143
GI ++ + V L+E ++ FL+ VV +V R + AP +
Sbjct: 79 GIPLALARPDVR---VVLLEPMERRCRFLQEVVAAVGLEEQVSVLRGR-APDAGIGPEGR 134
Query: 144 ---VISARALADLDTLLEYSFPWLY 165
V ARA+A L+ L P L
Sbjct: 135 RFGVAVARAVAPLERLGAILLPMLQ 159
>gi|16331741|ref|NP_442469.1| 16S rRNA methyltransferase GidB [Synechocystis sp. PCC 6803]
gi|3122154|sp|Q55787|RSMG_SYNY3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1001702|dbj|BAA10539.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803]
Length = 264
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PYPSIWID 77
E +E + Y L + ++NL + DF +H+ DSL L P + ID
Sbjct: 40 EQIEAMVKLYQGVLVGNARLNLTRITAPLDFLEKHLWDSLAGVLLSDHSRNCPQARV-ID 98
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-- 135
+G+GGGFPG+ ++ V L++S +KK ++L + + + EA
Sbjct: 99 IGTGGGFPGLPVALVWPQWS---VALLDSTHKKINYLEELGHRLGLANLAYLVARAEAVG 155
Query: 136 --PQMITTCDVISARALADLDTLLEYSFP 162
PQ + D+ RA+ + EY+ P
Sbjct: 156 NQPQHRSQYDLALIRAVGEGVVCAEYALP 184
>gi|288800185|ref|ZP_06405644.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333433|gb|EFC71912.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 299 str.
F0039]
Length = 206
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
+++ + +E+ + L+ W++KIN++S + + + HV SL + + + + +D
Sbjct: 10 HLTDKQIEQFKALQALYEDWNQKINVISRKDISNLYSHHVLHSLAIAKAINFKDGTTIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
G+GGGFPGI +I + + LI+ KK V++
Sbjct: 70 FGTGGGFPGIPLAIMFPNCK---FKLIDGTGKKIMVANEVIK 108
>gi|284929108|ref|YP_003421630.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [cyanobacterium UCYN-A]
gi|284809567|gb|ADB95272.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [cyanobacterium UCYN-A]
Length = 243
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 18/159 (11%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS------LRVFQLHPY 71
+ + + L++ E Y + + ++NL E+FW +H+ DS L FQ
Sbjct: 17 NWKPTEKHLDQWEELYQEIILINNQVNLTRIVKPEEFWEKHLWDSIAGVVGLPFFQYSRK 76
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ------KTAARG 125
+ ID+G+GGGFPG+ +I + L++S+ KK + ++++ A G
Sbjct: 77 MKV-IDIGTGGGFPGLPINIVFPIWD---FTLLDSRRKKIEVVNFLLKILELENSWALTG 132
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ A +I + D+ RA+ + T EY P+L
Sbjct: 133 R--AEKIAHDSRFRGKYDIALIRAVGESSTCSEYILPFL 169
>gi|167620985|ref|ZP_02389616.1| methyltransferase GidB [Burkholderia thailandensis Bt4]
Length = 213
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + + +D+GSGGG PGI+
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGARGAAATALDVGSGGGLPGIV 83
Query: 89 TSIQLSSIEGGLVNLIESK----NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
+I L + L ++++ K N+ + L+ + + G+V R + DV
Sbjct: 84 LAIALPGWQVTLNDIVQKKSAFQNQAKAELK-LGNLSVVTGRVETLR--PGADVQGKFDV 140
Query: 145 ISARALADL 153
I +RA ADL
Sbjct: 141 IVSRAFADL 149
>gi|325677527|ref|ZP_08157191.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
gi|325551774|gb|EGD21472.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
Length = 228
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV + + +L +D+GSG G PG+ +I + V L
Sbjct: 43 GLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPLAIARPDVR---VTL 99
Query: 104 IESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E +++ +L+ V T RG+ + + + DV+++RA+A L+ L
Sbjct: 100 VEPLLRRSVYLQEFVDSVGLSNVTVVRGR---AEQEGVVKEVGGADVVTSRAVAPLEKLA 156
Query: 158 EYSFP 162
+S P
Sbjct: 157 RWSLP 161
>gi|221214300|ref|ZP_03587272.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD1]
gi|221165955|gb|EED98429.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD1]
Length = 212
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFP 85
+L + L KW+ NL + + I+H+ DSL + L S + D+GSGGG P
Sbjct: 20 RLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDVGSGGGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---AARGKVFACRIQ-EAPQMITT 141
GI+ +I + L ++++ K+ + R ++ T G+V + R E P+
Sbjct: 80 GIVLAIVEPDWQVTLNDIVQKKSAFQTQTRAELKLTNLSVVTGRVESLRPGVEVPE---K 136
Query: 142 CDVISARALADL 153
D+I +RA ADL
Sbjct: 137 FDIIVSRAFADL 148
>gi|78044839|ref|YP_358880.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
gi|123577253|sp|Q3AG54|RSMG_CARHZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77996954|gb|ABB15853.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
Length = 235
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
++ +E ++ E +Y L + ++K NL + + ++ ++H DS V + +D+
Sbjct: 15 SIEKEKIQLFERYYRLLISENEKYNLTAVTGEDEVIVKHFLDSTAVLIYRDLTDLNAVDI 74
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQE 134
G+G GFPGI I + G + L++S K+ FL VV++ A +
Sbjct: 75 GTGAGFPGIPLKIM---VPGLKLLLLDSLKKRCLFLERVVRELNLTNVTVINERAENLGR 131
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
DV +RA+A++ LLE+ P L
Sbjct: 132 QKPFRELFDVTFSRAVAEVRVLLEFHAPLL 161
>gi|15611055|ref|NP_218436.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis H37Rv]
gi|7387700|sp|O53597|RSMG_MYCTU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|2808704|emb|CAA16232.1| PROBABLE GLUCOSE-INHIBITED DIVISION PROTEIN B GID [Mycobacterium
tuberculosis H37Rv]
Length = 224
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ LR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLRRTESLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|222824126|ref|YP_002575700.1| glucose inhibited division protein B [Campylobacter lari RM2100]
gi|222539348|gb|ACM64449.1| glucose inhibited division protein B [Campylobacter lari RM2100]
Length = 197
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQE 134
+D+GSG GFP I + L E L E KKASFLR + + + ++Q
Sbjct: 69 VDIGSGAGFPAIFLACIL---ENSSFFLFEPSVKKASFLRVIKTELNLININIIKEKLQN 125
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
P D+I++RAL D+ L+E S
Sbjct: 126 HPSF--KVDLITSRALMDIKPLIEIS 149
>gi|260890746|ref|ZP_05902009.1| 16S rRNA methyltransferase GidB [Leptotrichia hofstadii F0254]
gi|260859299|gb|EEX73799.1| 16S rRNA methyltransferase GidB [Leptotrichia hofstadii F0254]
Length = 240
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLG 79
V E + ++ F L ++ +NL + + +H DSL + + ++ +ID+G
Sbjct: 25 VPDEKITQMLKFLELLYNKNQIMNLTAIREKKGMLEKHFIDSLLLTKVINDDEKSFIDVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G GFPG++ +I E + L++S KK F+ V+++ + + A ++I
Sbjct: 85 TGAGFPGLVLAIYYP--EKKFL-LVDSVRKKIEFINEVIKELNLQN--VTTSFERAEELI 139
Query: 140 T---TC-DVISARALADLDTLLEYSFPWL 164
C DV R +A+L +LEY P++
Sbjct: 140 KDRRECFDVALCRGVANLRIILEYMIPFI 168
>gi|227547518|ref|ZP_03977567.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212033|gb|EEI79929.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 227
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---------SI 74
+ L KLE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 23 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRNVTNGIRFKT 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVF 128
D+GSGGGFPG++ + L + LIE ++ +L V RG+
Sbjct: 80 VADVGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSD 136
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A Q + I V++ RA+A + L ++ P L
Sbjct: 137 AVIQQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLL 172
>gi|291517737|emb|CBK71353.1| 16S rRNA m(7)G-527 methyltransferase [Bifidobacterium longum subsp.
longum F8]
Length = 227
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---------SI 74
+ L KLE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 23 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRNMTNGIRFKT 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVF 128
D+GSGGGFPG++ + L + LIE ++ +L V RG+
Sbjct: 80 VADVGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSD 136
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A Q + I V++ RA+A + L ++ P L
Sbjct: 137 AVIQQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLL 172
>gi|315586375|gb|ADU40756.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 35A]
Length = 178
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLRNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|159473280|ref|XP_001694767.1| methyltransferase [Chlamydomonas reinhardtii]
gi|158276579|gb|EDP02351.1| methyltransferase [Chlamydomonas reinhardtii]
Length = 258
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G G PG+I + + V L+++ K+ FL+ + R V CR +E
Sbjct: 96 IDVGTGAGLPGMIIAAARPQWK---VTLLDTLRKRCDFLKEAAARAGLRNVDVVWCRAEE 152
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWL 164
P++ DV ARA+A+ L E P++
Sbjct: 153 GGRRPELRQAYDVAVARAVAETRVLAELCMPFV 185
>gi|239622849|ref|ZP_04665880.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514846|gb|EEQ54713.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 227
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---------SI 74
+ L KLE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 23 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRNATNGIRFKT 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKVF 128
D+GSGGGFPG++ + L + LIE ++ +L V RG+
Sbjct: 80 VADVGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSD 136
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A Q + I V++ RA+A + L ++ P L
Sbjct: 137 AVIQQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLL 172
>gi|83720015|ref|YP_443811.1| 16S rRNA methyltransferase GidB [Burkholderia thailandensis E264]
gi|123536042|sp|Q2STD8|RSMG_BURTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83653840|gb|ABC37903.1| methyltransferase GidB [Burkholderia thailandensis E264]
Length = 231
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + + +D+GSGGG PGI+
Sbjct: 42 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGARGAAATALDVGSGGGLPGIV 101
Query: 89 TSIQLSSIEGGLVNLIESK----NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
+I L + L ++++ K N+ + L+ + + G+V R + DV
Sbjct: 102 LAIALPGWQVTLNDIVQKKSAFQNQAKAELK-LGNLSVVTGRVETLR--PGADVQGKFDV 158
Query: 145 ISARALADL 153
I +RA ADL
Sbjct: 159 IVSRAFADL 167
>gi|256398141|ref|YP_003119705.1| 16S rRNA methyltransferase GidB [Catenulispora acidiphila DSM
44928]
gi|256364367|gb|ACU77864.1| methyltransferase GidB [Catenulispora acidiphila DSM 44928]
Length = 245
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + V L P D+GSG G PGI+ ++ + V L
Sbjct: 53 GLLGPREVPRLWERHILNCAVVGGLLPADIQICDVGSGAGLPGIVLALARPDLS---VTL 109
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+E ++ FL V+ +V R +E DV+++RA+A LD L +S P
Sbjct: 110 LEPLLRRTLFLDEVIDLLGLENVRVLRGRAEEF-AGKERFDVVTSRAVAPLDRLAGWSLP 168
Query: 163 WL 164
L
Sbjct: 169 LL 170
>gi|296455141|ref|YP_003662285.1| methyltransferase GidB [Bifidobacterium longum subsp. longum
JDM301]
gi|296184573|gb|ADH01455.1| methyltransferase GidB [Bifidobacterium longum subsp. longum
JDM301]
Length = 221
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---------SI 74
+ L KLE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 17 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRNATNGIRFKT 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVF 128
D+GSGGGFPG++ + L + LIE ++ +L V RG+
Sbjct: 74 VADVGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSD 130
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A Q + I V++ RA+A + L ++ P L
Sbjct: 131 AVIQQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLL 166
>gi|253582391|ref|ZP_04859614.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
varium ATCC 27725]
gi|251835930|gb|EES64468.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
varium ATCC 27725]
Length = 233
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGG 82
E + L + L +++ NL + + +H DSL + L ID+G+G
Sbjct: 19 EKINNLIKYLKLLTEYNAHTNLTALRDEKSIIEKHFLDSLLLQNLIKKEFKKAIDIGTGA 78
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMI 139
GFPG++ +I +IE L++S KK FL V ++ V R ++ +
Sbjct: 79 GFPGMVLAIFNPNIE---FTLMDSIGKKTKFLDLVKERLELHNVTVVTSRAEDYINDENR 135
Query: 140 TTCDVISARALADLDTLLEYSFPWL 164
T D+ R ++ L T+LEY P+L
Sbjct: 136 ETYDLGLCRGVSKLGTILEYIIPFL 160
>gi|167951229|ref|ZP_02538303.1| hypothetical protein Epers_34650 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 120
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
++L +++ L KW++ NL + + RH+ DSL + PY +D+G+G G
Sbjct: 9 DQLLHYHALLHKWNQAFNLTAVRDPLEMIDRHLLDSLSLL---PYVEGKRVLDMGTGAGL 65
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
PGI +I L + L++S KK F+R
Sbjct: 66 PGIPLAICLPQTQ---FVLLDSNGKKIRFVR 93
>gi|331700389|ref|YP_004336628.1| ribosomal RNA small subunit methyltransferase G [Pseudonocardia
dioxanivorans CB1190]
gi|326955078|gb|AEA28775.1| Ribosomal RNA small subunit methyltransferase G [Pseudonocardia
dioxanivorans CB1190]
Length = 218
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ W RH+ + V + P S +DLGSG G PGI ++ + + L
Sbjct: 28 GLIGPRETGRLWDRHILNCAVVNETIPEGSRLVDLGSGAGLPGIPLALARPDLR---IVL 84
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISARALADLDTLLEYSF 161
+E ++ +L V+ +V R +E + DV++ARA+A L L ++
Sbjct: 85 VEPLARRVDWLNEVLDDLGLPIEVERGRAEETDVRRRWGGADVVTARAVAPLARLAGWAL 144
Query: 162 PWL 164
P L
Sbjct: 145 PLL 147
>gi|320459522|dbj|BAJ70143.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 221
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---------SI 74
+ L KLE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 17 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRNATNGIRFKT 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVF 128
D+GSGGGFPG++ + L + LIE ++ +L V RG+
Sbjct: 74 VADVGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSD 130
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A Q + I V++ RA+A + L ++ P L
Sbjct: 131 AVIQQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLL 166
>gi|305681660|ref|ZP_07404466.1| 16S rRNA methyltransferase GidB [Corynebacterium matruchotii ATCC
14266]
gi|305658820|gb|EFM48321.1| 16S rRNA methyltransferase GidB [Corynebacterium matruchotii ATCC
14266]
Length = 205
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L + E ++ L + W RH+ + + + D+GSG G
Sbjct: 10 DNLARAERYHDLLATTGAIRGFIGPRETPKLWDRHILNCAVLGEAIATGLTVADIGSGAG 69
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQ 137
PGI +I + + L+E K+++FL VV++ T RG+ +E
Sbjct: 70 LPGIPLAIARPDLT---IYLVEPLLKRSTFLTEVVRELGLENVTVIRGR---AEEREVKV 123
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ DV+++RA+A L L +S P +
Sbjct: 124 TLGLVDVVTSRAVAPLGKLAGWSLPLV 150
>gi|311696580|gb|ADP99453.1| glucose-inhibited division protein B [marine bacterium HP15]
Length = 214
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ + EKL F L KW++ NL + R + DSL +
Sbjct: 10 LRDGLATMGLSLDEDRQEKLLAFLGLLNKWNRAYNLTAVRDERVMVSRQLLDSLSIL--- 66
Query: 70 PYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
P+ + +D+G+GGG PGI +I L L++S KK FL V + + +
Sbjct: 67 PWVTTDHLLDVGAGGGLPGIPLAIALPEKR---FTLLDSNGKKTRFLNQCVLELGLKNVE 123
Query: 127 VFACRIQE--APQMITTCDVISARALADLDTLLEY 159
V R ++ P+ + IS+RA L+ L+ +
Sbjct: 124 VVHGRAEDCNPPEPFSQ---ISSRAFTALENLVSW 155
>gi|315654395|ref|ZP_07907303.1| glucose inhibited division protein B [Mobiluncus curtisii ATCC
51333]
gi|315491430|gb|EFU81047.1| glucose inhibited division protein B [Mobiluncus curtisii ATCC
51333]
Length = 226
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
++ Y+ L + L+ W RH+ + + +L P D+GSG G PG+
Sbjct: 36 QMRYYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSELLPEGVQVADVGSGAGLPGL 95
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +I + + LIES ++ +L++ V++ E + ++A
Sbjct: 96 VLAIGRPDLS---LTLIESMARRCEWLQFCVEELGLDNVRIRNARAEDVRGKQNFSYLTA 152
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+ +L TLL ++ P + ++
Sbjct: 153 RAVGNLSTLLGWTAPLVKKQ 172
>gi|113972262|ref|YP_736055.1| 16S rRNA methyltransferase GidB [Shewanella sp. MR-4]
gi|122943391|sp|Q0HD69|RSMG_SHESM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113886946|gb|ABI40998.1| methyltransferase GidB [Shewanella sp. MR-4]
Length = 206
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ E ++L F + KW+K NL S E +RH+ DSL V H +ID+G+G
Sbjct: 18 TAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSL-VVSPHLQGERFIDVGTG 76
Query: 82 GGFPGIITSI 91
G PGI +I
Sbjct: 77 PGLPGIPLAI 86
>gi|23465229|ref|NP_695832.1| 16S rRNA methyltransferase GidB [Bifidobacterium longum NCC2705]
gi|189440303|ref|YP_001955384.1| 16S rRNA methyltransferase GidB [Bifidobacterium longum DJO10A]
gi|312133637|ref|YP_004000976.1| gidb [Bifidobacterium longum subsp. longum BBMN68]
gi|317482353|ref|ZP_07941373.1| glucose inhibited division protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322692113|ref|YP_004221683.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
longum JCM 1217]
gi|29336746|sp|Q8G6J4|RSMG_BIFLO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766881|sp|B3DP27|RSMG_BIFLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|23325858|gb|AAN24468.1| possible glucose inhibited division protein B [Bifidobacterium
longum NCC2705]
gi|189428738|gb|ACD98886.1| Putative S-adenosylmethionine-dependent methyltransferase for
bacterial cell division [Bifidobacterium longum DJO10A]
gi|311772895|gb|ADQ02383.1| GidB [Bifidobacterium longum subsp. longum BBMN68]
gi|316916233|gb|EFV37635.1| glucose inhibited division protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320456969|dbj|BAJ67591.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 221
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---------SI 74
+ L KLE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 17 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRNATNGIRFKT 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKVF 128
D+GSGGGFPG++ + L + LIE ++ +L V RG+
Sbjct: 74 VADVGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSD 130
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A Q + I V++ RA+A + L ++ P L
Sbjct: 131 AVIQQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLL 166
>gi|213693340|ref|YP_002323926.1| methyltransferase GidB [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524801|gb|ACJ53548.1| methyltransferase GidB [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 227
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---------SI 74
+ L KLE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 23 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRNATNGIRFKT 79
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA------ARGKVF 128
D+GSGGGFPG++ + L + LIE ++ +L V RG+
Sbjct: 80 VADVGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSD 136
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A Q + I V++ RA+A + L ++ P L
Sbjct: 137 AVIQQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLL 172
>gi|114049511|ref|YP_740061.1| 16S rRNA methyltransferase GidB [Shewanella sp. MR-7]
gi|123130902|sp|Q0HPF1|RSMG_SHESR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113890953|gb|ABI45004.1| methyltransferase GidB [Shewanella sp. MR-7]
Length = 206
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ E ++L F + KW+K NL S E +RH+ DSL V H +ID+G+G
Sbjct: 18 TAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSL-VVSPHLQGEHFIDVGTG 76
Query: 82 GGFPGIITSI 91
G PGI +I
Sbjct: 77 PGLPGIPLAI 86
>gi|297243214|ref|ZP_06927149.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis AMD]
gi|296888748|gb|EFH27485.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis AMD]
Length = 236
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------ID 77
E LEK + F+ + L+ + W RH+ +S V + D
Sbjct: 32 EALEKCKLFHVKLQQEGLVRGLIGPRDMNILWERHILNSAAVVPFIKEAVVGRKNKRVAD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA- 135
+GSGGGFPG++ + L + V LIE ++ +L V + +F R E
Sbjct: 92 VGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLCECVALMKLKNVTIFHGRSDEVI 148
Query: 136 ----PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
I DV++ RA+A + L ++ P L +
Sbjct: 149 DKIKSHEIPAFDVVTCRAVAPMTKLAGWTIPLLNK 183
>gi|32475118|ref|NP_868112.1| glucose inhibited division protein B (GidB) [Rhodopirellula baltica
SH 1]
gi|55976485|sp|Q7UMW0|RSMG_RHOBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|32445658|emb|CAD75664.1| probable glucose inhibited division protein B (GidB)
[Rhodopirellula baltica SH 1]
Length = 231
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+++++INL +T + F R + D L++ QL +D+GSG G PGI ++ I+
Sbjct: 34 RYNEQINLTRHTTWDLFVTRDLRDCLQLAQLIQPGEEVLDMGSGNGVPGIPLAMLRPDID 93
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
V L ES K+A L +V + V+A R ++
Sbjct: 94 ---VALAESVGKRAKVLDELVTELNLPVPVYAARGED 127
>gi|117918460|ref|YP_867652.1| 16S rRNA methyltransferase GidB [Shewanella sp. ANA-3]
gi|166224614|sp|A0KR27|RSMG_SHESA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117610792|gb|ABK46246.1| methyltransferase GidB [Shewanella sp. ANA-3]
Length = 206
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ E ++L F + KW+K NL S E +RH+ DSL V H +ID+G+G
Sbjct: 18 TAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSL-VVSPHLQGERFIDVGTG 76
Query: 82 GGFPGIITSI 91
G PGI +I
Sbjct: 77 PGLPGIPLAI 86
>gi|15603351|ref|NP_246425.1| glucose-inhibited division protein B [Pasteurella multocida subsp.
multocida str. Pm70]
gi|13431543|sp|P57946|RSMG_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|12721870|gb|AAK03570.1| GidB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 210
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+++ + E+L L KW+K NL S + ++H+ DS+ V H +ID+G
Sbjct: 22 SITDQQKEQLIKLVLLLNKWNKAYNLTSVRDPMEMLVKHILDSV-VVSPHLQGKHFIDVG 80
Query: 80 SGGGFPGIITSIQLSSIEGGLVN------LIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+G G PG+ +I VN L++S K+ SF+R +++ + R+
Sbjct: 81 TGPGLPGLPLAI---------VNPNKHFVLLDSLGKRISFIRNAIRELGLDNVEAVLSRV 131
Query: 133 QE-APQMITTCDVISARALADLDTLLEY 159
+E P+ D + +RA A L + ++
Sbjct: 132 EEYHPE--QPFDGVLSRAFASLKDMTDW 157
>gi|327539004|gb|EGF25639.1| glucose inhibited division protein B (GidB) [Rhodopirellula baltica
WH47]
Length = 231
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+++++INL +T + F R + D L++ QL +D+GSG G PGI ++ I+
Sbjct: 34 RYNEQINLTRHTTWDLFVTRDLRDCLQLAQLIQPGEEVLDMGSGNGVPGIPLAMLRPDID 93
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
V L ES K+A L +V + V+A R ++
Sbjct: 94 ---VALAESVGKRAKVLDELVTELNLPVPVYAARGED 127
>gi|315420687|gb|ADU15876.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV V W RH+ + + +L +D+GSG G P + +I ++ V L
Sbjct: 34 GLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPCVPLAIARPDLQ---VVL 90
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEA--PQMITTCDVISARALADLDTLLEYSF 161
+E ++ FLR +V ++ R +E+ + D +RA+A LD L ++S
Sbjct: 91 LEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSM 150
Query: 162 PWL 164
P +
Sbjct: 151 PLI 153
>gi|300859523|ref|YP_003784506.1| glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis FRC41]
gi|300686977|gb|ADK29899.1| glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis FRC41]
gi|302207206|gb|ADL11548.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis C231]
gi|302331767|gb|ADL21961.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis 1002]
gi|308277459|gb|ADO27358.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis I19]
Length = 223
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 18/175 (10%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKL-----EYFYFLFLKWSKKINLVSSSTVEDFW 55
MK+ ++N L ++ E L EY L S + + + W
Sbjct: 1 MKHEENNGTEHGLELTPPPEIAAEIFGSLLDKAVEYHRLLATDGSTR-GFIGPREIPKLW 59
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH+ + + + + D+GSG G PGI ++ +E + LIE K++ FL
Sbjct: 60 DRHILNCAVIGEAMDSNARVADIGSGAGLPGIPLALARPDLE---ITLIEPLLKRSVFLG 116
Query: 116 YVVQK------TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V T RG+ I+ + DV+++RA+A L L +S P +
Sbjct: 117 EVKDSLGLDNVTIMRGRAEEKVIR---NELGLVDVVTSRAVAPLGKLAGWSLPLV 168
>gi|260774534|ref|ZP_05883447.1| ribosomal RNA small subunit methyltransferase G [Vibrio
metschnikovii CIP 69.14]
gi|260610440|gb|EEX35646.1| ribosomal RNA small subunit methyltransferase G [Vibrio
metschnikovii CIP 69.14]
Length = 210
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
VS + E+L + L KW+K NL S ++ ++H+ DS+ V PY +ID+
Sbjct: 19 VSDQQREQLVGYVELLNKWNKAYNLTSVRDPQEMLVKHILDSIVV---SPYLQGKRFIDV 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-AP 136
G+G G PGI +I + L++S K+ F++ V+ + R++E P
Sbjct: 76 GTGPGLPGIPLAIMNPDRQ---FVLLDSLGKRIRFIKQVLHELRIDNVTALQSRVEEFKP 132
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ D + +RA A + ++E+
Sbjct: 133 E--HGFDGVLSRAFASMLDMVEW 153
>gi|297379605|gb|ADI34492.1| methyltransferase GidB [Helicobacter pylori v225d]
Length = 178
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLSLRNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|322690178|ref|YP_004209912.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis 157F]
gi|320461514|dbj|BAJ72134.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 221
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP---------SI 74
+ L KLE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 17 DALPKLERFHAEIAEEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRNATNGIRFKT 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV------QKTAARGKVF 128
D+GSGGGFPG++ + L + LIE ++ +L V RG+
Sbjct: 74 VADVGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSD 130
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A Q + I V++ RA+A + L ++ P L
Sbjct: 131 AVIQQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLL 166
>gi|227893998|ref|ZP_04011803.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
gi|227864199|gb|EEJ71620.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
Length = 240
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYP 72
+ + ++ + ++ + ++ L ++ ++ +NL + ++ +++H DS+ ++
Sbjct: 13 HNFKLTDKQKQQFKLYFKLLVEVNEHVNLTRITEEDEVYLKHFYDSVTPLFTFGEVFKDG 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR-YVVQKTAARGKVFACR 131
+ D+G+G GFP I I +++ V +++S K+ +FL+ + Q ++ R
Sbjct: 73 ATLCDVGAGAGFPSIPLKILKPTLK---VTIVDSLQKRLNFLKDLIAQLGLTDVELVHGR 129
Query: 132 IQEAPQMI---TTCDVISARALADLDTLLEYSFPWLYQK 167
++ Q D+++ARA+A + L EY P + ++
Sbjct: 130 AEDVGQNKLYREKFDIVTARAVARMSVLSEYCLPLVKKE 168
>gi|221202190|ref|ZP_03575225.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2M]
gi|221208749|ref|ZP_03581748.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2]
gi|221171381|gb|EEE03829.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2]
gi|221177984|gb|EEE10396.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2M]
Length = 212
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSI-WIDLGSGGGFP 85
+L + L KW+ NL + + I+H+ DSL + L S +D+GSGGG P
Sbjct: 20 RLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARALDVGSGGGLP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---AARGKVFACRIQ-EAPQMITT 141
GI+ +I + L ++++ K+ + R ++ T G+V + R E P+
Sbjct: 80 GIVLAIVEPDWQVTLNDIVQKKSAFQTQTRAELKLTNLSVVTGRVESLRPGVEVPE---K 136
Query: 142 CDVISARALADL 153
D+I +RA ADL
Sbjct: 137 FDIIVSRAFADL 148
>gi|183597129|ref|ZP_02958622.1| hypothetical protein PROSTU_00368 [Providencia stuartii ATCC 25827]
gi|188023439|gb|EDU61479.1| hypothetical protein PROSTU_00368 [Providencia stuartii ATCC 25827]
Length = 207
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++ + ++L + L KW+K NL S + IRH+ DS+ V + +
Sbjct: 13 LANIELTDQQKQQLVGYVELLAKWNKAYNLTSVRDPQQMLIRHIMDSI-VVNGQLKGTSF 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G G PG+ +I + V L++S K+ FL+ V + + R++E
Sbjct: 72 IDVGTGPGLPGVPLAI--VRPDSHFV-LLDSLGKRIRFLKQVQHELGLNNIEPLQSRVEE 128
Query: 135 APQMITTCDVISARALADLDTLLEY 159
Q D + +RA A L +L +
Sbjct: 129 Y-QPEAGFDGVISRAFASLSDMLSW 152
>gi|119952975|ref|YP_945184.1| methyltransferase GidB [Borrelia turicatae 91E135]
gi|254766882|sp|A1QYX2|RSMG_BORT9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119861746|gb|AAX17514.1| methyltransferase GidB [Borrelia turicatae 91E135]
Length = 207
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQL--HPYPSIWIDLGS 80
++++KL ++ L + + NLVS++ D + HV DS+ + P +D+GS
Sbjct: 19 KSIDKLRFYIEKVLLFGTRFNLVSNNDRNFDAVLLHVLDSVAGLPIIKDKNPRQVLDVGS 78
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
G GFPGI+ ++ + + L+E NKKA+FLR +
Sbjct: 79 GAGFPGIVLAL-FDNFRKYI--LLERSNKKATFLRMI 112
>gi|114322026|ref|YP_743709.1| methyltransferase GidB [Alkalilimnicola ehrlichii MLHE-1]
gi|122310596|sp|Q0A4L8|RSMG_ALHEH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114228420|gb|ABI58219.1| 16S rRNA m(7)G-527 methyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 220
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
E L + L +W++ NL + + RH+ DSL + PY +D+GSG G
Sbjct: 27 EALITYLRLLERWNRAYNLSAIRDPGEMLHRHLLDSLSIL---PYVEGDSLLDVGSGAGL 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
PGI ++ + V L++S KK F R V
Sbjct: 84 PGIPLALARPGLT---VTLLDSNGKKQRFTRQVA 114
>gi|261837817|gb|ACX97583.1| glucose-inhibited division protein [Helicobacter pylori 51]
Length = 178
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLRNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|20807574|ref|NP_622745.1| glucose-inhibited division protein [Thermoanaerobacter
tengcongensis MB4]
gi|20516111|gb|AAM24349.1| glucose-inhibited division protein [Thermoanaerobacter
tengcongensis MB4]
Length = 86
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-----WIDLGSGGGFPGIIT 89
+ LKW++K+NL +S+ E I+H DSL + + Y I ID G+G GFPGI
Sbjct: 8 MLLKWNQKMNLAASTEEEKVVIKHFLDSLSLVR---YNKIKRQEKVIDTGTGAGFPGIPL 64
Query: 90 SIQLSSI 96
I I
Sbjct: 65 KIVFPEI 71
>gi|227549432|ref|ZP_03979481.1| glucose-inhibited division protein B [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078509|gb|EEI16472.1| glucose-inhibited division protein B [Corynebacterium
lipophiloflavum DSM 44291]
Length = 222
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ VE W RH+ + + + D+GSG G PGI +I + V L
Sbjct: 50 GFIGPKEVERLWSRHLLNCAVISEAFDEGLEVADIGSGAGLPGIPLAIARPDLS---VTL 106
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
IE K++++L VV + V R + Q DV+++RA+A L L +S P
Sbjct: 107 IEPLLKRSTYLSEVVDELGLE-NVTVVRGRAEEQSSALFDVVTSRAVAPLGKLAGWSLPL 165
Query: 164 L 164
+
Sbjct: 166 V 166
>gi|222109271|ref|YP_002551535.1| 16S rRNA methyltransferase gidb [Acidovorax ebreus TPSY]
gi|254766889|sp|B9M9W4|RSMG_DIAST RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221728715|gb|ACM31535.1| methyltransferase GidB [Acidovorax ebreus TPSY]
Length = 226
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF------------- 66
++S + +L F L KW+K NL + ++ H+ DSL
Sbjct: 23 DLSEAQITQLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVPPLRRHVARRGQG 82
Query: 67 -QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+H + +D+GSGGG PG++ +I ++ V+ +++ KKA+F++ A G
Sbjct: 83 GAIH-LGARLLDVGSGGGLPGVVFAICCPEVD---VSCVDTVAKKAAFIQQ------AAG 132
Query: 126 KVFACRIQEAPQMITTC----DVISARALADLDTLLEYS 160
+ + + T DV+S RA A L +S
Sbjct: 133 TLGLSNLHGIHARVETLAGPFDVVSCRAFAALADFTAWS 171
>gi|312142022|ref|YP_004009358.1| methyltransferase gidb [Rhodococcus equi 103S]
gi|311891361|emb|CBH50682.1| methyltransferase GidB [Rhodococcus equi 103S]
Length = 226
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV + + +L +D+GSG G PG+ +I + V L
Sbjct: 43 GLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPLAIARPDVR---VTL 99
Query: 104 IESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E +++ +L+ V T RG+ + + + DV+++RA+A L+ L
Sbjct: 100 VEPLLRRSVYLQEFVDSVGLSNVTVVRGR---AEQEGVVKEVGGADVVTSRAVAPLEKLA 156
Query: 158 EYSFP 162
+S P
Sbjct: 157 RWSLP 161
>gi|67922987|ref|ZP_00516481.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
gi|67855135|gb|EAM50400.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
Length = 241
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 32/165 (19%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV---------------EDSL 63
+ ++E LE+ E Y + +++INL + DF +H+ EDSL
Sbjct: 16 WQPTQEQLEQWEKLYQEIILINRQINLTRITEPNDFLEKHLWDSLAGVIGLDFLNYEDSL 75
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+V +D+G+G GFPG+ SI + + L++S KK + ++ ++
Sbjct: 76 KV----------VDIGTGAGFPGLPISIIFPHWQ---LTLLDSTRKKINVIKLFLEALKL 122
Query: 124 RG-KVFACR---IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ F R I P+ D+ RA+ + EY P+L
Sbjct: 123 NNSQTFIGRAEDIGHIPEHREQYDLGLIRAVGEPSVCAEYVLPFL 167
>gi|167564629|ref|ZP_02357545.1| methyltransferase GidB [Burkholderia oklahomensis EO147]
Length = 213
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + ++H+ DSL + + +D+GSGGG PGI+
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPHLGARGAAATALDVGSGGGLPGIV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L + V L + +KK++F + + G+V R+ +
Sbjct: 84 LAITLPEWQ---VTLNDIVHKKSAFQTQAKAELKLGNLSVVTGRVETLRL--GADVPGKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|330815035|ref|YP_004358740.1| Methyltransferase GidB [Burkholderia gladioli BSR3]
gi|327367428|gb|AEA58784.1| Methyltransferase GidB [Burkholderia gladioli BSR3]
Length = 229
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIWIDLGS 80
++KL + L KW+ NL + I+H+ DSL + P+ +D+GS
Sbjct: 35 VDKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIV---PHLRELDVKTALDVGS 91
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNK---KASFLRYVVQKTAARGKVFACRI-QEAP 136
GGG PGI+ +I + L +++ K+ +A + + G+V + R E P
Sbjct: 92 GGGLPGIVLAIVFPHWQVTLNDIVHKKSAFQTQAKAELKLANLSVVTGRVESLRPGHEVP 151
Query: 137 QMITTCDVISARALADL 153
DVI +RA ADL
Sbjct: 152 GQF---DVIVSRAFADL 165
>gi|295394852|ref|ZP_06805065.1| 16S rRNA methyltransferase GidB [Brevibacterium mcbrellneri ATCC
49030]
gi|294972185|gb|EFG48047.1| 16S rRNA methyltransferase GidB [Brevibacterium mcbrellneri ATCC
49030]
Length = 209
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+ ++W L+ ++ W RH+ + V L + D+GSG G PG++
Sbjct: 27 EHLATTGVEW----GLIGPRELDKLWTRHILNCAVVAPLIHDDDVVGDIGSGAGLPGLVL 82
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMITTCDVIS 146
S L+ V LIE+ ++ +L VV ++ R+++ ++ T V++
Sbjct: 83 S--LAQPHASFV-LIEAMERRVDWLGMVVDDLGIENVRIIRGRVEDLVDDEVFT---VVT 136
Query: 147 ARALADLDTLLEYSFPWL 164
ARA+ L+ L+E+S P L
Sbjct: 137 ARAVKALNVLVEWSAPVL 154
>gi|121602982|ref|YP_980311.1| 16S rRNA methyltransferase GidB [Polaromonas naphthalenivorans CJ2]
gi|189040705|sp|A1VIB2|RSMG_POLNA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120591951|gb|ABM35390.1| 16S rRNA m(7)G-527 methyltransferase [Polaromonas naphthalenivorans
CJ2]
Length = 221
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPY------- 71
+S + + +L + + KW++ NL S + H+ DSL V L Y
Sbjct: 22 QLSEQQINQLLAYQAMIAKWTQVYNLTSVRDPAEMMTHHLLDSLAAVPALQRYLHRSGLE 81
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
S +D+GSG G PG++ +I + V +++ KKA+F++ A R
Sbjct: 82 QGSRLLDVGSGAGLPGVVIAICCPQVA---VTCVDTVAKKAAFIKQAA--LALRLPNLTG 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + DVI +RA A L ++S
Sbjct: 137 LHARVESITESFDVICSRAFASLADFTKWS 166
>gi|331007813|ref|ZP_08330918.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC1989]
gi|330418380|gb|EGG92941.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC1989]
Length = 225
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI---RHVEDSL------------RV 65
+S + ++ L + F+KW+K NL S + D + +H+ DSL +
Sbjct: 22 ISDKKIQLLMAYLSEFVKWNKAYNL---SAIRDPLVMVEKHLLDSLVLVPFLEKEIKKNI 78
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ P ID+G+GGG PGI +I I+ L++S KK FL V + A +
Sbjct: 79 DKQQPLIERIIDVGTGGGLPGIPLAIIFPEID---FTLLDSNGKKTRFLFQVKTQLALKN 135
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLL 157
E+ Q ++ +RA A L ++
Sbjct: 136 VTIENTRVESYQPEKCFSIVMSRAFASLQDMV 167
>gi|308184186|ref|YP_003928319.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SJM180]
gi|308060106|gb|ADO02002.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SJM180]
Length = 178
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAI- 62
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ L E + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 63 -PLALEKPEAQFI-LLEPRVKRAAFLNYIKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|154148362|ref|YP_001407212.1| methyltransferase GidB [Campylobacter hominis ATCC BAA-381]
gi|193806439|sp|A7I3X1|RSMG_CAMHC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|153804371|gb|ABS51378.1| methyltransferase GidB [Campylobacter hominis ATCC BAA-381]
Length = 183
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLS 94
F K +K N + S T + +EDSL + + P + ID+GSG GFP I ++ L
Sbjct: 16 FGKCLEKFNKIHSITNYNDLSAVIEDSLEGLKFITEMPKVAIDIGSGAGFPAIFLAMVLP 75
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISARALADL 153
+ +L E KKA+FL Y + + +I+ I D+I++RA+ +
Sbjct: 76 YTKW---HLFEPNTKKAAFLTYAKVNLKLKNIIIHNTKIENETPFI--ADLITSRAVMKV 130
Query: 154 DTLLEYS 160
L++ S
Sbjct: 131 PDLIKIS 137
>gi|238025742|ref|YP_002909973.1| 16S rRNA methyltransferase GidB [Burkholderia glumae BGR1]
gi|237874936|gb|ACR27269.1| Methyltransferase GidB [Burkholderia glumae BGR1]
Length = 213
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLGSG 81
KL + L KW+ NL S I+H+ DSL + P+ + +D+GSG
Sbjct: 20 KLLDYVALLGKWNAVYNLTSIRDPRQMLIQHILDSLSIV---PHLRSLDAATRALDVGSG 76
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNK---KASFLRYVVQKTAARGKVFACRI-QEAPQ 137
GG PGI+ +I + L +++ K+ +A + + G+V R E P
Sbjct: 77 GGLPGIVLAIVFPGWQVTLNDIVHKKSAFQTQAKAELKLANLSVVTGRVETLRPGHEVPG 136
Query: 138 MITTCDVISARALADL 153
DVI +RA ADL
Sbjct: 137 QF---DVIVSRAFADL 149
>gi|307731469|ref|YP_003908693.1| methyltransferase GidB [Burkholderia sp. CCGE1003]
gi|307586004|gb|ADN59402.1| methyltransferase GidB [Burkholderia sp. CCGE1003]
Length = 227
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIWIDLGSGG 82
KL + L KW+ NL + I+H+ DSL + P+ P +D+GSGG
Sbjct: 35 KLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV---PHLSQRKPGSVLDVGSGG 91
Query: 83 GFPGIITSI 91
G PGI+ +I
Sbjct: 92 GLPGIVLAI 100
>gi|94265413|ref|ZP_01289165.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
[delta proteobacterium MLMS-1]
gi|93454070|gb|EAT04405.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
[delta proteobacterium MLMS-1]
Length = 463
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 47/177 (26%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPS------------- 73
E ++ LKW +++NLV+ + + H DSL + L P P+
Sbjct: 229 ELYFRELLKWHRRVNLVARAPEPELLELHFLDSLTILPLCRFEPPPTGSPVVTDHEVRLP 288
Query: 74 ------------------------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+D+GSG GFPG++ + + L+E + K
Sbjct: 289 PVAPSPARTAAGLPGTADSAKDAGSLLDIGSGAGFPGLVLKCCRPELA---LTLLEPRQK 345
Query: 110 KASFLRYVVQKTAARG--KVFACRIQEAPQMITT--CDVISARALADLDTLLEYSFP 162
+ +FLR V++ T + +V A R+ + +I+ RA+A + L+ P
Sbjct: 346 RVAFLRQVLRVTGLKAGCEVLAQRLVPGGGALAQRRWPLITGRAVASVADFLDLCAP 402
>gi|297625196|ref|YP_003706630.1| glucose inhibited division protein [Truepera radiovictrix DSM
17093]
gi|297166376|gb|ADI16087.1| glucose inhibited division protein [Truepera radiovictrix DSM
17093]
Length = 212
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI---W 75
++V + +L + L ++S ++L+S +E+F + E + + P+ S
Sbjct: 2 FHVKHDLAAQLAGYAALVRRYSGALDLMSPRAIENFEDKVAESLVYADLIEPHLSPAERL 61
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQE 134
+DLGSG G PGI +++ + L+E + K+A FL VV A +V A +
Sbjct: 62 LDLGSGVGLPGIPLALRFPDAP---LILVERRRKRARFLELVVAHLQLANVRVMATDARA 118
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
+P + ++A+A+ SFP LY
Sbjct: 119 LSPDDVGRVAWVTAQAVG--------SFPLLY 142
>gi|294143116|ref|YP_003559094.1| glucose-inhibited division protein B [Shewanella violacea DSS12]
gi|293329585|dbj|BAJ04316.1| glucose-inhibited division protein B [Shewanella violacea DSS12]
Length = 206
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F + KW+K NL S + IRH+ DSL V H +ID+G+G G PGI +I
Sbjct: 28 FVEMLNKWNKAYNLTSVRDPKQMLIRHIMDSLAV-SAHLVGERFIDVGTGPGLPGIPLAI 86
>gi|268593522|ref|ZP_06127743.1| 16S rRNA methyltransferase GidB [Providencia rettgeri DSM 1131]
gi|291310946|gb|EFE51399.1| 16S rRNA methyltransferase GidB [Providencia rettgeri DSM 1131]
Length = 206
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDL 78
+++ + ++L + L KW+K NL S + IRH+ DS+ V QL+ + +ID+
Sbjct: 17 DLTEKQKQQLVDYVGLLAKWNKAYNLTSVRDPQQMLIRHIMDSIVVNGQLN--GTKFIDV 74
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+G G PG+ +I L++S K+ FL+ V + + R++E +
Sbjct: 75 GTGPGLPGVPLAIVRPDSH---FVLLDSLGKRIRFLKQVQHELGLTNIEPVQSRVEEY-R 130
Query: 138 MITTCDVISARALADLDTLL 157
+ D + +RA A L+ +L
Sbjct: 131 IENGFDGVISRAFASLNDML 150
>gi|226327000|ref|ZP_03802518.1| hypothetical protein PROPEN_00860 [Proteus penneri ATCC 35198]
gi|225204837|gb|EEG87191.1| hypothetical protein PROPEN_00860 [Proteus penneri ATCC 35198]
Length = 176
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S + IRH+ DS+ V Q + +ID+G+G G PGI +I
Sbjct: 4 KWNKAYNLTSVRDPQQMLIRHILDSIVVSQ-YLEGEKFIDVGTGPGLPGIPLAIMRPDHH 62
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ F++ V + + R++E Q D + +RA A ++ +
Sbjct: 63 ---FVLLDSLGKRVRFMKQVQHELGLDNIEPVQYRVEEY-QTEQPFDGVISRAFASMNDM 118
Query: 157 L 157
L
Sbjct: 119 L 119
>gi|291547595|emb|CBL20703.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus sp. SR1/5]
Length = 200
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + ++ ++H DSL + I +D+G+G GFPG+ I +E
Sbjct: 1 MNLTGITEFDEVLVKHFLDSLCCVKAVDMGKIKTVMDIGTGAGFPGVPLKIAFPEVE--- 57
Query: 101 VNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT---TCDVISARALADLDTL 156
L++S NK+ FL G R +E + D+ +RA++ L TL
Sbjct: 58 ACLLDSLNKRVKFLEETFALLGLEGISAIHGRAEEYAKNKAYREKYDLCVSRAVSGLATL 117
Query: 157 LEYSFPWL 164
EY P++
Sbjct: 118 SEYCLPYV 125
>gi|292493914|ref|YP_003529353.1| methyltransferase GidB [Nitrosococcus halophilus Nc4]
gi|291582509|gb|ADE16966.1| methyltransferase GidB [Nitrosococcus halophilus Nc4]
Length = 211
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
IL L+ + + + + L + L KW+++ NL + + +H+ DSL +
Sbjct: 2 GTDILEKGLLILGFKLEQRQVGGLLAYVRLLEKWNQRYNLTAIRNPAEMISKHLFDSLSI 61
Query: 66 FQLHPYPSIW----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
PS+ +D+GSG G PGI +I E L+ +K A R+++Q +
Sbjct: 62 -----GPSLGEGRILDVGSGAGLPGIPLAIAYPEREFALL------DKSAKKTRFLIQAS 110
Query: 122 AARG---KVFACRIQEAPQMITTCDVISARALADL 153
G C EA DV+ RA A L
Sbjct: 111 IELGLSNVSVVCERVEAYHPPDLFDVVVTRAFAKL 145
>gi|282879011|ref|ZP_06287773.1| 16S rRNA methyltransferase GidB [Prevotella buccalis ATCC 35310]
gi|281298846|gb|EFA91253.1| 16S rRNA methyltransferase GidB [Prevotella buccalis ATCC 35310]
Length = 208
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSI 91
L+ W+ KIN++S ++ + HV SL + +L + + +DLG+GGGFPGI +I
Sbjct: 27 LYSDWNAKINVISRKDIDHLYEHHVLHSLSIAKLIGFIDETKVLDLGTGGGFPGIPLAI 85
>gi|300780163|ref|ZP_07090019.1| 16S rRNA methyltransferase GidB [Corynebacterium genitalium ATCC
33030]
gi|300534273|gb|EFK55332.1| 16S rRNA methyltransferase GidB [Corynebacterium genitalium ATCC
33030]
Length = 203
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ V W RH+ + + + D+GSG G PGI +I ++ + L
Sbjct: 31 GFIGPKEVPRLWDRHIFNCAVIGEAFKEGQRIADIGSGAGLPGIPLAIARPDLD---ITL 87
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
IE K++++L VV++ V R +E +M+ D +++RA+A L L +S P
Sbjct: 88 IEPLLKRSTYLGEVVEELGLDNVTVIRGRAEEQKKML--FDAVTSRAVAPLGKLASWSLP 145
Query: 163 WL 164
+
Sbjct: 146 LV 147
>gi|93005885|ref|YP_580322.1| methyltransferase GidB [Psychrobacter cryohalolentis K5]
gi|122415520|sp|Q1QBW5|RSMG_PSYCK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|92393563|gb|ABE74838.1| methyltransferase GidB [Psychrobacter cryohalolentis K5]
Length = 238
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
W+K NL + + + I+HV D L + P S+ +D+G+G G P +I I + E
Sbjct: 67 WNKAYNLTAITDPVEALIKHVIDCLAIITHLPSGSL-LDIGTGAGLPAVI--IAICQPER 123
Query: 99 GLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L +S KK F++ V + + + A RI EA + + DVI++RA A L +
Sbjct: 124 SCTAL-DSNQKKIRFIKQVSSELGLSNMQPIASRI-EAHE--ASYDVITSRAFASLIDFV 179
Query: 158 EYSFPWL 164
+ P L
Sbjct: 180 AVAEPRL 186
>gi|260913577|ref|ZP_05920054.1| methyltransferase GidB [Pasteurella dagmatis ATCC 43325]
gi|260632353|gb|EEX50527.1| methyltransferase GidB [Pasteurella dagmatis ATCC 43325]
Length = 210
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
+L F L KW+K NL S + ++H+ DS+ + PY +ID+G+G G P
Sbjct: 30 QLVKFVLLLHKWNKAYNLTSVRDPIEMLVKHILDSIII---SPYLEGERFIDVGTGPGLP 86
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCD 143
G+ +I + + V L++S K+ SF+R V++ + R++E P+ + D
Sbjct: 87 GLPLAI--INPDKQFV-LLDSLGKRISFIRNAVRELGLNNVEPVLSRVEEYQPEQL--FD 141
Query: 144 VISARALADLDTLLEY 159
+ +RA A L + ++
Sbjct: 142 GVLSRAFASLKDMTDW 157
>gi|167838436|ref|ZP_02465295.1| methyltransferase GidB [Burkholderia thailandensis MSMB43]
Length = 213
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------WIDLGSGGGFP 85
+ L KW+ NL + I+H+ DSL + P+ +D+GSGGG P
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV---PHLGACGAAVSALDVGSGGGLP 80
Query: 86 GIITSIQLSSIEGGLVNLIESK----NKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GI+ +I L + L ++++ K N+ + L+ + + G+V R ++
Sbjct: 81 GIVLAIALPGWQVALNDIVQKKSAFQNQAKAELK-LGNLSVVTGRVETLR--PGVEVPGK 137
Query: 142 CDVISARALADL 153
DVI +RA ADL
Sbjct: 138 FDVIVSRAFADL 149
>gi|134294226|ref|YP_001117961.1| 16S rRNA methyltransferase GidB [Burkholderia vietnamiensis G4]
gi|189039489|sp|A4JA23|RSMG_BURVG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134137383|gb|ABO53126.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia vietnamiensis
G4]
Length = 228
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIWIDLGSGGG 83
L+Y L KW+ NL + I+H+ DSL + P+ + +D+GSGGG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPRQMLIQHILDSLSIV---PHLRGRTDARVLDVGSGGG 93
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---AARGKVFACRIQEAPQMIT 140
PGI+ +I + L ++++ K+ + +R ++ T G+V + +Q ++
Sbjct: 94 LPGIVLAIVQPGWQVTLNDIVQKKSAFQTQMRAELKLTNLSVVTGRVES--LQPGGEVPE 151
Query: 141 TCDVISARALADL 153
D+I +RA ADL
Sbjct: 152 KFDMIVSRAFADL 164
>gi|251793667|ref|YP_003008397.1| 16S rRNA methyltransferase GidB [Aggregatibacter aphrophilus
NJ8700]
gi|247535064|gb|ACS98310.1| methyltransferase GidB [Aggregatibacter aphrophilus NJ8700]
Length = 210
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S ++ ++H+ DSL V + +ID+G+G G PG+ +I
Sbjct: 37 LLNKWNKAYNLTSVRDPQEMLVKHILDSL-VVSSYLQGDRFIDVGTGPGLPGLPLAI--I 93
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLD 154
+ + V L++S K+ SF+R+ V + + E Q D + +RA A L
Sbjct: 94 NPDKHFV-LLDSLGKRISFIRHAVHELGLTNVEPVLKRVEEYQPDHQFDGVLSRAFASLK 152
Query: 155 TLLEY 159
+ ++
Sbjct: 153 DMTDW 157
>gi|13508297|ref|NP_110247.1| methyltransferase GidB [Mycoplasma pneumoniae M129]
gi|2498409|sp|P75220|RSMG_MYCPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1673955|gb|AAB95932.1| methyltransferase GidB [Mycoplasma pneumoniae M129]
gi|301633434|gb|ADK86988.1| 16S rRNA methyltransferase GidB [Mycoplasma pneumoniae FH]
Length = 191
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-----IDLGSGG 82
KL+ + L ++ NL T + + V++ + +F + Y S + DLGSG
Sbjct: 5 KLKQYVQLVQTANQNFNLTGLKTEGEIYEHLVQEIIELF--NEYDSYFDHKKVADLGSGN 62
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQMITT 141
G PG+I + I+ ++LI+SK+KK +FL+ V+Q C RI+ +
Sbjct: 63 GCPGVILKLLFPQIK--TLDLIDSKHKKVNFLKEVIQTLELNNTQALCARIENHTEQY-- 118
Query: 142 CDVISARALADL 153
D + +R L +
Sbjct: 119 -DTLCSRGLGSI 129
>gi|309800606|ref|ZP_07694750.1| methyltransferase GidB [Streptococcus infantis SK1302]
gi|308115752|gb|EFO53284.1| methyltransferase GidB [Streptococcus infantis SK1302]
Length = 172
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--- 128
P +D+G+G GFP + I ++ V +I+S NK+ +FL + Q+ F
Sbjct: 6 PIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLNLLAQELGLENVHFYHG 62
Query: 129 -ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + D+++ARA+A L L E + P+L
Sbjct: 63 RAEDFGQDKNFRAQFDIVTARAVARLQVLSELTIPFL 99
>gi|121592463|ref|YP_984359.1| 16S rRNA methyltransferase GidB [Acidovorax sp. JS42]
gi|189039375|sp|A1W208|RSMG_ACISJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120604543|gb|ABM40283.1| 16S rRNA m(7)G-527 methyltransferase [Acidovorax sp. JS42]
Length = 226
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF------------- 66
++S + +L F L KW+K NL + ++ H+ DSL
Sbjct: 23 DLSEAQITQLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVPPLRRHVAQRGQD 82
Query: 67 -QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P + +D+GSGGG PG++ +I ++ V+ +++ KKA+F++ A G
Sbjct: 83 SAARPGARL-LDVGSGGGLPGVVFAICCPEVD---VSCVDTVAKKAAFIQQ------AAG 132
Query: 126 KVFACRIQEAPQMITTC----DVISARALADLDTLLEYS 160
+ + + T DV+S RA A L +S
Sbjct: 133 TLGLSNLHGIHARVETLAGPFDVVSCRAFAALADFTAWS 171
>gi|329577027|gb|EGG58502.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1467]
Length = 200
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
Query: 43 INLVSSSTVEDFWIRHVEDS--LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + + ++ +++H DS L F+ D+G+G GFP I I S+
Sbjct: 1 MNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN--- 57
Query: 101 VNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQ---EAPQMITTCDVISARALADLDTL 156
V +++S NK+ +FL +V + A ++ R + + + D ++ARA+A L+ L
Sbjct: 58 VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETLAKQAEFRGAFDYVTARAVARLNVL 117
Query: 157 LEYSFPWLYQK 167
E P + ++
Sbjct: 118 SELCLPLVKKE 128
>gi|260904987|ref|ZP_05913309.1| 16S rRNA methyltransferase GidB [Brevibacterium linens BL2]
Length = 217
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ ++ W RH+ + V + + D+GSG G PGI I L E +V L
Sbjct: 45 GLIGPREIDRLWTRHILNCGVVAEFIDDSDVVGDVGSGAGLPGI--PIALLRPEAQVV-L 101
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMITTCDVISARALADLDTLLEYS 160
IE ++ +L+ VV A ++ R++E +M T V+++RA+ + TL+E++
Sbjct: 102 IEPMERRVEWLKMVVDDLALDNVRIVRARVEELVDEEMFT---VVTSRAVKAMTTLIEWT 158
>gi|170731466|ref|YP_001763413.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia MC0-3]
gi|169814708|gb|ACA89291.1| methyltransferase GidB [Burkholderia cenocepacia MC0-3]
Length = 228
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPKQMLIQHILDSLSIVPHLRGRTSAHVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMITTCD 143
I+ +I + L ++++ K+ + +R + + G+V + +Q ++ D
Sbjct: 97 IVLAIVEPGWQVTLNDIVQKKSAFQTQMRAELKLANLSVVTGRVES--LQPGVEVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|71894003|ref|YP_279449.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae J]
gi|123645392|sp|Q4A933|RSMG_MYCHJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71852130|gb|AAZ44738.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae J]
Length = 202
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
+D+G+G GFP I I IE + + ES K+ FL+ V +K + + +QE
Sbjct: 72 LDIGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDVSEKLDLKFNLICKPVQEI 128
Query: 135 APQMITTCDVISARALADLDTL 156
PQ D+I+ARA+A+L+ L
Sbjct: 129 NPQKF---DIITARAVANLEKL 147
>gi|307547044|ref|YP_003899523.1| glucose-inhibited division protein B [Halomonas elongata DSM 2581]
gi|307219068|emb|CBV44338.1| glucose-inhibited division protein B [Halomonas elongata DSM 2581]
Length = 220
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
KW++ NL + E+ RH+ DS V P+ S +D+G+G G PG++ +I
Sbjct: 40 KWNRAYNLTAVRAPEEMVSRHLLDSAAVA---PFVTGSTLLDVGAGPGLPGLVLAILEPE 96
Query: 96 IEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARA 149
V L++S KK F R V + T + +V A E P+ C+VIS RA
Sbjct: 97 RR---VTLLDSNGKKVRFQRQAVMELGLTNVTPVQARVEAF---EGPKE-GYCEVIS-RA 148
Query: 150 LADLDTLLEYS 160
A L + S
Sbjct: 149 FASLGDFVSLS 159
>gi|24376229|ref|NP_720273.1| glucose-inhibited division protein B [Shewanella oneidensis MR-1]
gi|29336672|sp|Q8E8B0|RSMG_SHEON RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24351292|gb|AAN57716.1|AE015908_1 glucose-inhibited division protein B [Shewanella oneidensis MR-1]
Length = 206
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ E ++L F + KW+K NL S E +RH+ DSL V H +ID+G+G
Sbjct: 18 TAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEIMLVRHIMDSL-VVSKHLQGDRFIDVGTG 76
Query: 82 GGFPGIITSI 91
G PGI +I
Sbjct: 77 PGLPGIPLAI 86
>gi|296329305|ref|ZP_06871806.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296153661|gb|EFG94478.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 232
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG+I +I E L++S KK FL V + A +V R +
Sbjct: 71 LIDIGTGAGFPGMILAI---FNEDKKFTLLDSVRKKTDFLELVKNELALNNVEVINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|19705043|ref|NP_602538.1| glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|22095723|sp|Q8RI89|RSMG_FUSNN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19712959|gb|AAL93837.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 232
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG+I +I E L++S KK FL V + A +V R +
Sbjct: 71 LIDIGTGAGFPGMILAI---FNEDKKFTLLDSVRKKTDFLELVKNELALNNVEVINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|254246687|ref|ZP_04940008.1| Methyltransferase [Burkholderia cenocepacia PC184]
gi|124871463|gb|EAY63179.1| Methyltransferase [Burkholderia cenocepacia PC184]
Length = 228
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPKQMLIQHILDSLSIVPHLRGRASARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMITTCD 143
I+ +I + L ++++ K+ + +R + + G+V + +Q ++ D
Sbjct: 97 IVLAIVEPGWQVTLNDIVQKKSAFQTQMRAELKLANLSVVTGRVES--LQPGVEVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|325970665|ref|YP_004246856.1| ribosomal RNA small subunit methyltransferase G [Spirochaeta sp.
Buddy]
gi|324025903|gb|ADY12662.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta sp.
Buddy]
Length = 219
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-----VFQLHPYPSIWI-DLGS 80
++L+ + F ++ LV++S ED IRH+ DSL + S I D GS
Sbjct: 26 DQLDAYIAEFELFNPVYKLVAASG-EDLVIRHILDSLSGAPTLASLCATFASCRIADFGS 84
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI--QEAPQM 138
G G PGI +I L S L+E ++ FLR + + + + +V R+ ++ ++
Sbjct: 85 GAGLPGIPLAIALPSYS---FTLVERMGRRVDFLRNALLRASLQDRV---RVIDKDLKEV 138
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
DVI+ RA L +L+ P L
Sbjct: 139 KDQFDVITFRAFHPLADILDLVAPLL 164
>gi|110835597|ref|YP_694456.1| methyltransferase GidB; glucose-inhibited division protein B
[Alcanivorax borkumensis SK2]
gi|123345183|sp|Q0VKW4|RSMG_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110648708|emb|CAL18184.1| Methyltransferase GidB; glucose-inhibited division protein B
[Alcanivorax borkumensis SK2]
Length = 204
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L +KW++ NL + ++ RH+ DSL V + +D+G+G G PG+I ++
Sbjct: 29 YVDLLVKWNQAYNLTAIRDPQEMVTRHLLDSLAVLA-YLEEGDTLDVGTGAGIPGVILAV 87
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMITTCDVISA 147
+ + V L++S KK F+R ++ +V R+++ AP I C
Sbjct: 88 --ARPQQAFV-LLDSNGKKTRFVRQARRELGLDNVEVVHGRVEQYRKAPSQI-IC----- 138
Query: 148 RALADLDTLLEYSFPWL 164
RA A L +L P +
Sbjct: 139 RAFASLSDMLALMTPIM 155
>gi|300728002|ref|ZP_07061380.1| methyltransferase GidB [Prevotella bryantii B14]
gi|299774844|gb|EFI71458.1| methyltransferase GidB [Prevotella bryantii B14]
Length = 189
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPG 86
+E L+ W+ KIN++S +++ + HV SL + + + S +D G+GGGFPG
Sbjct: 1 MEQLDELYRDWNSKINVISRKDIDNLYEHHVLHSLAIAKYINFKSGTKVLDFGTGGGFPG 60
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDV 144
I +I ++ LI+ KK +R + A G V A ++ + D
Sbjct: 61 IPLAILFPEVK---FRLIDGTGKK---IRVATEVANAIGLKNVDAVHLR-GEEEKGKYDF 113
Query: 145 ISARALADLDTLLE 158
+ +RA+ L L++
Sbjct: 114 VVSRAVMPLPDLMK 127
>gi|319760788|ref|YP_004124725.1| methyltransferase gidb [Alicycliphilus denitrificans BC]
gi|330822708|ref|YP_004386011.1| methyltransferase GidB [Alicycliphilus denitrificans K601]
gi|317115349|gb|ADU97837.1| methyltransferase GidB [Alicycliphilus denitrificans BC]
gi|329308080|gb|AEB82495.1| methyltransferase GidB [Alicycliphilus denitrificans K601]
Length = 215
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 13/149 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--------RVFQLHPY 71
+++ E + +L F L KW+K NL + ++ H+ DSL + Q
Sbjct: 17 DLTEEQIARLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVAPLRRHLAQQGGA 76
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+GSGGG PG++ +I ++ V+ + K + G R
Sbjct: 77 GRRLLDVGSGGGLPGVVFAICCPDLDVSCVDTVAKKAAFIQQAAAALGLRNLHG--IHAR 134
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYS 160
++ + DV+S RA A L + +S
Sbjct: 135 VET---LAGPFDVVSCRAFASLPDFVNWS 160
>gi|172059161|ref|YP_001806813.1| 16S rRNA methyltransferase GidB [Burkholderia ambifaria MC40-6]
gi|238689147|sp|B1YQK3|RSMG_BURA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171991678|gb|ACB62597.1| methyltransferase GidB [Burkholderia ambifaria MC40-6]
Length = 228
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPKQMLIQHILDSLSIVPHLRDRASARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI---QEAPQMITTCD 143
I+ +I + L ++++ K+ + +R + A V R+ Q ++ D
Sbjct: 97 IVLAIVQPDWQVTLNDIVQKKSAFQTQMR--AELKLANLSVVTGRVELLQPGVEVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|171315837|ref|ZP_02905068.1| methyltransferase GidB [Burkholderia ambifaria MEX-5]
gi|171099026|gb|EDT43811.1| methyltransferase GidB [Burkholderia ambifaria MEX-5]
Length = 228
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFP 85
+L + L KW+ NL + + I+H+ DSL + L S + D+GSGGG P
Sbjct: 36 RLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVPHLRDRASARVLDVGSGGGLP 95
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQ-EAPQMITT 141
GI+ +I + L ++++ K+ + +R + + G+V R E P+
Sbjct: 96 GIVLAIVQPDWQVTLNDIVQKKSAFQTQMRAELKLANLSVVTGRVELLRPGVEVPE---K 152
Query: 142 CDVISARALADL 153
D+I +RA ADL
Sbjct: 153 FDMIVSRAFADL 164
>gi|229816991|ref|ZP_04447273.1| hypothetical protein BIFANG_02246 [Bifidobacterium angulatum DSM
20098]
gi|229785736|gb|EEP21850.1| hypothetical protein BIFANG_02246 [Bifidobacterium angulatum DSM
20098]
Length = 222
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 28/176 (15%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +LN +V + L LE F+ + + L+ V+ W RH+ +S +
Sbjct: 5 LNGSPILN--DVLGDALPMLEVFHAKLEREGEPRGLIGPRDVDIIWERHILNSAAIVPFI 62
Query: 70 PYPSIWI------DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + D+GSGGGFPGI+ + L E LIE ++ +L V +
Sbjct: 63 REATDGMRFKTVADVGSGGGFPGIVAAACLPDHE---FTLIEPMERRVEWLEECVNEMGL 119
Query: 124 RG-KVFACRIQEA-----------PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R +E P + TC RA+A + L ++ P L +
Sbjct: 120 ENVTIIRARSEEVITSLRKDRSKHPYAVVTC-----RAVAPMTKLSGWTLPLLKPQ 170
>gi|239617843|ref|YP_002941165.1| methyltransferase GidB [Kosmotoga olearia TBF 19.5.1]
gi|239506674|gb|ACR80161.1| methyltransferase GidB [Kosmotoga olearia TBF 19.5.1]
Length = 224
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKW--SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
E EK E FLK S K NL + + +I+HVED L + +ID+G+G
Sbjct: 3 ELDEKKEELLTRFLKEIISSKHNLTAIKDFKQAYIKHVEDVLLAVRKLNLCGRYIDIGTG 62
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMIT 140
GG PGI+ ++ E L++ + K ++ + ++ + R +E A
Sbjct: 63 GGVPGIVCAVLFPEAEWYLLDSVGKKVQEIERISLLLGLSNVH--FIVGRAEEVAKGYAE 120
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
D RA+ D LEY P++
Sbjct: 121 FFDGAFLRAVGRADISLEYGTPFV 144
>gi|319944932|ref|ZP_08019194.1| glucose inhibited division protein B [Lautropia mirabilis ATCC
51599]
gi|319741502|gb|EFV93927.1| glucose inhibited division protein B [Lautropia mirabilis ATCC
51599]
Length = 341
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPS-IWIDLGSGGGFPGIIT 89
L +W++ NL+ +S H+ DSL + + P P +D+G+G GFPGI+
Sbjct: 47 LLKQWNRTFNLLGNSDSAHLIDEHLLDSLAIVPVLERYLPRPEEALVDVGTGAGFPGILL 106
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+I + L+E KK +FLR V
Sbjct: 107 AIVQPQRP---IYLVEPVGKKVAFLRQSV 132
>gi|119963842|ref|YP_949870.1| 16S rRNA methyltransferase GidB [Arthrobacter aurescens TC1]
gi|166224572|sp|A1RCA8|RSMG_ARTAT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119950701|gb|ABM09612.1| methyltransferase GidB [Arthrobacter aurescens TC1]
Length = 216
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
Y L +++ L+ + W RHV + + S D+GSG G PG+ +
Sbjct: 26 YVEHLATSGTER-GLIGPREIPRLWSRHVLNCAVIESAIAMDSHVADVGSGAGLPGLCLA 84
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARA 149
I +E + LIE ++ +L+ VV + R + A M+ DV++ARA
Sbjct: 85 IARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTIMRTRAELAVGMV-DADVVTARA 140
Query: 150 LADLDTLLEYSFPWL 164
++ L L + P L
Sbjct: 141 VSALSNLAGLTIPLL 155
>gi|88705407|ref|ZP_01103118.1| Glucose inhibited division protein [Congregibacter litoralis KT71]
gi|88700497|gb|EAQ97605.1| Glucose inhibited division protein [Congregibacter litoralis KT71]
Length = 211
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W+K NL + +H+ DSL V H +ID+G+G G PGI +I L
Sbjct: 33 RWNKAYNLTAIRDEAVMVTKHLLDSLAVLP-HLRGQRFIDVGTGAGLPGIPLAIALPDKH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALADLDT 155
+L++S KK FL + + + ++ R+ + P D + +RA A LD
Sbjct: 92 ---FSLLDSNGKKTRFLTHAANELSLDNVEIVKSRVADFVPG--ERYDAVLSRAFASLDA 146
Query: 156 LL 157
++
Sbjct: 147 MI 148
>gi|134281460|ref|ZP_01768168.1| methyltransferase GidB [Burkholderia pseudomallei 305]
gi|134247127|gb|EBA47213.1| methyltransferase GidB [Burkholderia pseudomallei 305]
Length = 213
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---DLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + D+GSGGG PG++
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F V + + G+V R +
Sbjct: 84 LAIALP---GWRVTLNDIVHKKSAFQNQVKAELKLGNLSVVTGRVETLR--PGADVPAKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|68537195|ref|YP_251900.1| glucose-inhibited division protein B [Corynebacterium jeikeium
K411]
gi|82592863|sp|Q4JSC5|RSMG_CORJK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68264794|emb|CAI38282.1| glucose-inhibited division protein B [Corynebacterium jeikeium
K411]
Length = 222
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+Y FL ++ L+ V W RH+ +S + ++ +D+GSG G PGI
Sbjct: 34 DYAEFLATAGIER-GLLGPREVPRIWERHILNSAVLGEVIDEGCRVVDIGSGAGLPGIPL 92
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I ++ V L+E ++ +FL V + +V R ++ + + DV ++
Sbjct: 93 AIARPDLK---VQLLEPLLRRYNFLAEVNSQLNLGCEVVRGRAEDPAVVEALGGADVATS 149
Query: 148 RALADLDTLLEYSFPWL 164
RA+A L L +S P +
Sbjct: 150 RAVAPLGKLTRWSLPLV 166
>gi|261839232|gb|ACX98997.1| glucose-inhibited division protein B [Helicobacter pylori 52]
Length = 178
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPKVQ---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|220914664|ref|YP_002489973.1| 16S rRNA methyltransferase GidB [Arthrobacter chlorophenolicus A6]
gi|254766876|sp|B8H8Y9|RSMG_ARTCA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219861542|gb|ACL41884.1| methyltransferase GidB [Arthrobacter chlorophenolicus A6]
Length = 216
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
Y L +++ L+ + W RHV + + P S D+GSG G PG+ +
Sbjct: 26 YVEHLATSGTER-GLIGPREIPRLWSRHVLNCAVIESEIPQGSRVADVGSGAGLPGLCLA 84
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARA 149
I +E + LIE ++ +L+ VV V R + A + DV++ARA
Sbjct: 85 IARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTVMRSRAELAVGHV-EADVVTARA 140
Query: 150 LADLDTLLEYSFPWL 164
++ L L + P L
Sbjct: 141 VSALTNLAGLTIPLL 155
>gi|78064753|ref|YP_367522.1| glucose inhibited division protein [Burkholderia sp. 383]
gi|123569641|sp|Q39KY8|RSMG_BURS3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77965498|gb|ABB06878.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia sp. 383]
Length = 228
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPKQMLIQHILDSLSIVSHLRGRASARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMITTCD 143
I+ +I + L ++++ K+ + +R + + G+V + +Q ++ D
Sbjct: 97 IVLAIVEPDWQITLNDIVQKKSAFQTQMRAELKLANLSVVTGRVES--LQPGVEVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|161523274|ref|YP_001578286.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans ATCC
17616]
gi|189351953|ref|YP_001947581.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans ATCC
17616]
gi|238687050|sp|A9AJF2|RSMG_BURM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160340703|gb|ABX13789.1| methyltransferase GidB [Burkholderia multivorans ATCC 17616]
gi|189335975|dbj|BAG45045.1| glucose inhibited division protein B [Burkholderia multivorans ATCC
17616]
Length = 228
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFP 85
+L + L KW+ NL + + I+H+ DSL + L S + D+GSGGG P
Sbjct: 36 RLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDVGSGGGLP 95
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---AARGKVFACRIQ-EAPQMITT 141
G++ +I + L ++++ K+ + R ++ T G+V R E P+
Sbjct: 96 GLVLAIVEPDWQVTLNDIVQKKSAFQTQTRAELKLTNLSVVTGRVETLRPGVEVPE---K 152
Query: 142 CDVISARALADL 153
D+I +RA ADL
Sbjct: 153 FDIIVSRAFADL 164
>gi|116626940|ref|YP_829096.1| methyltransferase GidB [Candidatus Solibacter usitatus Ellin6076]
gi|122251262|sp|Q01NF9|RSMG_SOLUE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116230102|gb|ABJ88811.1| methyltransferase GidB [Candidatus Solibacter usitatus Ellin6076]
Length = 210
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L ++ ++ NL + + I+H+ DS+ R+F P+ +D GSG GFPGI ++
Sbjct: 31 LIVETNQHFNLTRIVSPREAAIKHIADSVIPWRLFSGAPH---VVDAGSGAGFPGIPLAL 87
Query: 92 QLSSIEGGLVNLIESKNKKASFL 114
L L+ES KKA F+
Sbjct: 88 VLPETR---FTLLESTQKKARFI 107
>gi|54020291|ref|YP_116184.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae 232]
gi|81603603|sp|Q5ZZN1|RSMG_MYCH2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53987464|gb|AAV27665.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae 232]
Length = 202
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
+D+G+G GFP I I IE + + ES K+ FL+ + +K + + +QE
Sbjct: 72 LDIGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDISEKLDLKFNLICKPVQEI 128
Query: 135 APQMITTCDVISARALADLDTL 156
PQ D+I+ARA+A+L+ L
Sbjct: 129 NPQKF---DIITARAVANLEKL 147
>gi|58338077|ref|YP_194662.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus NCFM]
gi|227902745|ref|ZP_04020550.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
gi|81311393|sp|Q5FI43|RSMG_LACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|58255394|gb|AAV43631.1| glucose inhibited division protein B [Lactobacillus acidophilus
NCFM]
gi|227869408|gb|EEJ76829.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
Length = 240
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYP 72
+ + +S + ++ + ++ ++ ++ +NL + + +++H DS+ ++
Sbjct: 13 HNFELSDKQKQQFKLYFKYLIEVNEHVNLTRITEENEVYLKHFFDSVTPLFTFGEVFKDG 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ D+G+G GFP I I +++ V +++S K+ +FL+ +++K ++ R
Sbjct: 73 ATLCDVGAGAGFPSIPLKILNPTLK---VTIVDSLAKRLTFLKNLIEKLGLTDVELVHGR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ Q D+++ARA+A + L EY P +
Sbjct: 130 AEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLV 165
>gi|72080982|ref|YP_288040.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae 7448]
gi|123644618|sp|Q4A772|RSMG_MYCH7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71914106|gb|AAZ54017.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae
7448]
Length = 202
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G+G GFP I I IE + + ES K+ FL+ + +K + + +QE
Sbjct: 72 LDIGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDISEKLDLKFNLICKPVQEI 128
Query: 136 -PQMITTCDVISARALADLDTL 156
PQ D+I+ARA+A+L+ L
Sbjct: 129 DPQKF---DIITARAVANLEKL 147
>gi|293363890|ref|ZP_06610626.1| 16S rRNA methyltransferase GidB [Mycoplasma alligatoris A21JP2]
gi|292552380|gb|EFF41154.1| 16S rRNA methyltransferase GidB [Mycoplasma alligatoris A21JP2]
Length = 230
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDLGSG 81
E LE ++ L + +K +NL + W + +SL +D+G+G
Sbjct: 17 NFEDLEKYFSLVTETNKVLNLTGFEG-DKLWEEGIYESLLFIDKIVTKTDSKTLLDIGAG 75
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMI 139
GFP I +I +++ + + E K+ FL VV + V FA R ++
Sbjct: 76 AGFPSIPYAIVNKNLK---ITIYEPIKKRVDFLNTVVDTLSLEKNVQIFALRAEDVKD-- 130
Query: 140 TTC-DVISARALADLDTLLEYSF 161
C D+++ARA+ D+ T+L SF
Sbjct: 131 KNCFDLVTARAVGDVSTMLMSSF 153
>gi|327334545|gb|EGE76256.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL097PA1]
Length = 211
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S+ + L P D+GSG G PGI +I +E + L
Sbjct: 39 GLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAILRPDLE---MTL 95
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
IE ++++FL + + +V R A + DV+ +RA+A L TL+ ++
Sbjct: 96 IEPMLRRSNFLTEALDELGLDDRVTVVR-GRAEDVDLHVDVVVSRAVAKLATLINWT 151
>gi|208434331|ref|YP_002265997.1| glucose-inhibited division protein B [Helicobacter pylori G27]
gi|208432260|gb|ACI27131.1| glucose-inhibited division protein B [Helicobacter pylori G27]
Length = 178
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSELE-PQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|153811975|ref|ZP_01964643.1| hypothetical protein RUMOBE_02368 [Ruminococcus obeum ATCC 29174]
gi|149831874|gb|EDM86960.1| hypothetical protein RUMOBE_02368 [Ruminococcus obeum ATCC 29174]
Length = 200
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + ++ ++H DSL + + +D+G+G GFPG+ I +E
Sbjct: 1 MNLTGITEFQEVLVKHFLDSLACVKAVDMTKVSKIMDIGTGAGFPGVPLKIAFPHLEA-- 58
Query: 101 VNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
L++S K+ +FL + R + FA Q D+ +RA+++
Sbjct: 59 -CLLDSLKKRVNFLEETFALLKLENITAIHGRAEEFAKNKAYREQY----DLCVSRAVSN 113
Query: 153 LDTLLEYSFPWL 164
L TL EY P++
Sbjct: 114 LATLSEYCLPYV 125
>gi|203287636|ref|YP_002222651.1| glucose inhibited division protein B [Borrelia recurrentis A1]
gi|226795819|sp|B5RQZ6|RSMG_BORRA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|201084856|gb|ACH94430.1| glucose inhibited division protein B [Borrelia recurrentis A1]
Length = 210
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHPYPSIW--I 76
N + E ++KL ++ L +S + NLVS++ D + H DS+ + ++ +
Sbjct: 15 NFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVSGLPIVKDKNLRQVL 74
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG GFPGI+ ++ + L+E NKKA FL+ + + +V ++E
Sbjct: 75 DVGSGAGFPGIVLALFDRCRK---YVLLERSNKKAIFLKMISLELGLENVEVLEHNVEEE 131
Query: 136 PQMITTCDVISARALADL 153
+ I+ RA D+
Sbjct: 132 Q---NKYEFITIRAFGDI 146
>gi|317009030|gb|ADU79610.1| 16S rRNA methyltransferase GidB [Helicobacter pylori India7]
Length = 178
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|256848571|ref|ZP_05554012.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
gi|256714623|gb|EEU29603.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
Length = 242
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI------DL 78
+ + +Y + ++ +NL + +D +++H DS+ F L P++ D+
Sbjct: 22 MNQFAQYYQDLVATNQVVNLTRITDEKDVYLKHFYDSITGSFAL---PALRTESLSLCDI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--------TAARGKVFAC 130
G+G GFP + I ++ V +++S NK+ +FL+ +V + +R + F+
Sbjct: 79 GAGAGFPSLPLKIAFPQLK---VTIVDSLNKRINFLQELVARLNLDNVTLVHSRAEDFS- 134
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFP 162
++ DV++ARA+A L L E P
Sbjct: 135 --KKGSAHRENYDVVTARAVARLSVLSELCLP 164
>gi|324999876|ref|ZP_08120988.1| glucose-inhibited division protein B [Pseudonocardia sp. P1]
Length = 224
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ ++ W RHV + + ++ P + +D+GSG G PGI ++ + + +
Sbjct: 38 GLIGPRELDRLWDRHVLNCAVLAEVVPPDAKVVDVGSGAGLPGIPLALARPDLR---IVM 94
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI---TTCDVISARALADLDTLLEYS 160
IE ++ +L VV V R +E P ++ DV++ARA+ L L
Sbjct: 95 IEPLARRVDWLDEVVSDLGLDVAVERGRAEE-PAVLRRWEGADVVTARAVGPLARLAGLC 153
Query: 161 FPWL 164
P L
Sbjct: 154 LPLL 157
>gi|302840158|ref|XP_002951635.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
gi|300263244|gb|EFJ47446.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
Length = 168
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-----KVFAC 130
+D+G+G G PG++ ++ + V L++S K+ FLR + AAR +V C
Sbjct: 4 LDVGTGAGLPGMVLAVARPQWK---VTLLDSLRKRCEFLR----EAAARAGLDNVEVVWC 56
Query: 131 RIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
R ++A P++ D+ ARA+A+ L E P++
Sbjct: 57 RAEDAGRRPELRQAYDIAIARAVAEARVLAELCLPFV 93
>gi|255322058|ref|ZP_05363206.1| 16S rRNA methyltransferase GidB [Campylobacter showae RM3277]
gi|255300871|gb|EET80140.1| 16S rRNA methyltransferase GidB [Campylobacter showae RM3277]
Length = 185
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEG 98
K N V S T + DS+ ++ P ID+GSG GFP I ++ L E
Sbjct: 22 KFNRVHSLTSYKNLNEQIADSIAPLEIFPQILDAKTAIDVGSGAGFPAIFLAMILRECE- 80
Query: 99 GLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+L E KK++FL YV + +V +C+I++ +I++RAL LL
Sbjct: 81 --WHLFEPSPKKSAFLSYVKAELNLTNVRVKSCKIEDGEPF--AAQLITSRALMKTKDLL 136
>gi|312601598|gb|ADQ90853.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyopneumoniae 168]
Length = 149
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
+D+G+G GFP I I IE + + ES K+ FL+ V +K + + +QE
Sbjct: 19 LDIGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDVSEKLDLKFNLICKPVQEI 75
Query: 135 APQMITTCDVISARALADLDTL 156
PQ D+I+ARA+A+L+ L
Sbjct: 76 NPQKF---DIITARAVANLEKL 94
>gi|15645677|ref|NP_207854.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 26695]
gi|3122146|sp|O25703|RSMG_HELPY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2314206|gb|AAD08103.1| glucose-inhibited division protein (gidB) [Helicobacter pylori
26695]
Length = 178
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|301155224|emb|CBW14689.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
parainfluenzae T3T1]
Length = 203
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQ 92
L KW+K NL S ++ ++H+ DS+ V PY +ID+G+G G PG+ +I
Sbjct: 30 LLNKWNKAYNLTSVRDPQEMLVKHILDSIVV---SPYLQGEHFIDVGTGPGLPGLPLAII 86
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
+ + L++S K+ SF+R V++ + R++E Q D + +RA A
Sbjct: 87 NPTKQ---FVLLDSLGKRISFIRNAVRELGLTNVEPVLSRVEEY-QPEQKFDGVLSRAFA 142
Query: 152 DLDTLLEY 159
L + ++
Sbjct: 143 SLKDMTDW 150
>gi|186477784|ref|YP_001859254.1| 16S rRNA methyltransferase GidB [Burkholderia phymatum STM815]
gi|184194243|gb|ACC72208.1| methyltransferase GidB [Burkholderia phymatum STM815]
Length = 225
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIWIDLGSGG 82
KL + L KW+ NL + I+H+ DSL + P+ + +D+GSGG
Sbjct: 36 KLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV---PHLASLERASALDVGSGG 92
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMI 139
G PGI+ +I + + ++++ K+ S ++ + + G+V R+Q ++
Sbjct: 93 GLPGIVLAIVFPAWSITVNDIVQKKSAFQSQVKAELGLTNLSVVTGRV--ERLQPGVEVP 150
Query: 140 TTCDVISARALADL 153
DVI +RA A+L
Sbjct: 151 GKFDVIVSRAFAEL 164
>gi|86743217|ref|YP_483617.1| 16S rRNA methyltransferase GidB [Frankia sp. CcI3]
gi|123764289|sp|Q2J4A4|RSMG_FRASC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86570079|gb|ABD13888.1| 16S rRNA m(7)G-527 methyltransferase [Frankia sp. CcI3]
Length = 265
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RHV + + + P + +D+GSG G PGI ++ + V L
Sbjct: 40 GLIGPRETDRLWDRHVLNCAVLADVVPVQADVVDVGSGAGLPGIPLALARPDLR---VVL 96
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD-----VISARALADLDTLLE 158
+E ++ FL VV ++ R AP D + ARA+A L+ L
Sbjct: 97 LEPMERRCRFLHEVVATIGLEDQISVVR-GRAPDAGIGPDGRRFGIAVARAVAPLERLGA 155
Query: 159 YSFPWL 164
FP L
Sbjct: 156 ILFPML 161
>gi|109947704|ref|YP_664932.1| 16S rRNA methyltransferase GidB [Helicobacter acinonychis str.
Sheeba]
gi|123066175|sp|Q17WP3|RSMG_HELAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109714925|emb|CAJ99933.1| glucose inhibited division protein B [Helicobacter acinonychis str.
Sheeba]
Length = 178
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRMKRAAFLNYLKSVLPLKNIEIVKKRLEEYQNPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLNDK 139
>gi|115350141|ref|YP_771980.1| 16S rRNA methyltransferase GidB [Burkholderia ambifaria AMMD]
gi|122324419|sp|Q0BJM7|RSMG_BURCM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115280129|gb|ABI85646.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia ambifaria AMMD]
Length = 228
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPKQMLIQHILDSLSIVPHLRDRASARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI---QEAPQMITTCD 143
I+ +I + L ++++ K+ + +R + A V R+ Q + D
Sbjct: 97 IVLAIVRPDWQVTLNDIVQKKSAFQTQMR--AELKLANLSVVTGRVELLQPGVDVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|269118890|ref|YP_003307067.1| methyltransferase GidB [Sebaldella termitidis ATCC 33386]
gi|268612768|gb|ACZ07136.1| methyltransferase GidB [Sebaldella termitidis ATCC 33386]
Length = 231
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDLGSGGGFPG 86
L+Y L K +K +NL + ++ +H DSL + +L H I ID+G+G GFPG
Sbjct: 25 LKYLRLLTEK-NKVMNLTAIRDEKEILEKHFIDSLLLSELFLHTDKKI-IDIGTGAGFPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC---- 142
++ ++ + LV+ S KK SF+ + + A ++T
Sbjct: 83 LVLAVAFPEKDFLLVD---SVRKKISFIDEAAENLGLTN--VKTSYERAEDLVTKSRSSF 137
Query: 143 DVISARALADLDTLLEYSFPWL 164
D+ R +A+L +LEY P L
Sbjct: 138 DLGLCRGVANLRIILEYMIPLL 159
>gi|170699463|ref|ZP_02890506.1| methyltransferase GidB [Burkholderia ambifaria IOP40-10]
gi|170135612|gb|EDT03897.1| methyltransferase GidB [Burkholderia ambifaria IOP40-10]
Length = 228
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPKQMLIQHILDSLSIVPHLRDRASARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI---QEAPQMITTCD 143
I+ +I + L ++++ K+ + +R + A V R+ Q + D
Sbjct: 97 IVLAIVQPDWQVTLNDIVQKKSAFQTQMR--AELKLANLSVVTGRVELLQPGVDVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|332673231|gb|AEE70048.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 83]
Length = 178
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|304383179|ref|ZP_07365652.1| 16S rRNA methyltransferase GidB [Prevotella marshii DSM 16973]
gi|304335650|gb|EFM01907.1| 16S rRNA methyltransferase GidB [Prevotella marshii DSM 16973]
Length = 208
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLGSGGGF 84
E+ L+ +W+ KIN++S +++ + H+ SL + + + + +DLG+GGGF
Sbjct: 19 EQFAALGSLYPEWNAKINVISRKDIDNLYEHHILHSLAIAKAVMFRAGTSVLDLGTGGGF 78
Query: 85 PGIITSI 91
PGI +I
Sbjct: 79 PGIPLAI 85
>gi|83815319|ref|YP_444214.1| glucose inhibited division protein B [Salinibacter ruber DSM 13855]
gi|123529871|sp|Q2S6G7|RSMG_SALRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83756713|gb|ABC44826.1| glucose inhibited division protein B [Salinibacter ruber DSM 13855]
Length = 215
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIWIDL 78
+++ E E+++ F L++++++NL+S T + F RH+ L + P +D
Sbjct: 11 SLTAEQREQIDRFREQLLRFNQRVNLISPETEDTFRTRHLLHCLTLTARDFPAGCTVVDW 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
G+GGG P I + + E +V ++S KK+ +R + ++
Sbjct: 71 GTGGGLPAI--PLAICHPEATVVG-VDSVGKKSRAVRTIARR 109
>gi|57168863|ref|ZP_00367993.1| methyltransferase GidB [Campylobacter coli RM2228]
gi|57019699|gb|EAL56385.1| methyltransferase GidB [Campylobacter coli RM2228]
Length = 194
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
N +L+ +N + KL+ + + K+++ NL +++ + +E L+ F
Sbjct: 7 NLILSDFN-EEDFRAKLKIYKEILNKFNRIHNLTQLKNIDENILDSIE-ILKYFDFSKAK 64
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACR 131
+I +D+GSG GFP I + L S +L E KKA+FLR + ++ V+ +
Sbjct: 65 NI-VDIGSGAGFPAIFLAFILPSN----FHLFEPNPKKAAFLRSIKIECNLTNLTVYKEK 119
Query: 132 IQEAPQMITTCDVISARALADLDTLLE 158
++ D+I++RAL D+ L++
Sbjct: 120 VENYKSSFKA-DIITSRALMDVKPLIK 145
>gi|307637080|gb|ADN79530.1| rRNA small subunit methyltransferase,glucose inhibited division
protein [Helicobacter pylori 908]
gi|325995671|gb|ADZ51076.1| rRNA small subunit methyltransferase/glucose inhibited division
protein B [Helicobacter pylori 2018]
gi|325997267|gb|ADZ49475.1| 16S rRNA methyltransferase [Helicobacter pylori 2017]
Length = 178
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYACILLEWNQTHNLSGARNLSELE-PQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I+ E + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 64 LAIE--KPEAQFI-LLEPRIKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSRCFLKDK 139
>gi|254779074|ref|YP_003057179.1| 16S rRNA methyltransferase GidB [Helicobacter pylori B38]
gi|254000985|emb|CAX28929.1| Glucose-inhibited division protein [Helicobacter pylori B38]
Length = 178
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSELE-PQITDALKPLEFVKDFKSCLDIGSGAGLPAI- 62
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ L E + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 63 -PLALEKPETQFI-LLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|226357390|ref|YP_002787130.1| 16S rRNA methyltransferase GidB [Deinococcus deserti VCD115]
gi|259495492|sp|C1D0A7|RSMG_DEIDV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226319380|gb|ACO47376.1| putative methyltransferase (Glucose-inhibited division protein B)
[Deinococcus deserti VCD115]
Length = 244
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 19/150 (12%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGG 82
L++ L + + + NL + T D ++H DSL L + +DLG+G
Sbjct: 24 LDQFAALLVLLQEGNARFNLTALKTERDIVLKHFVDSLTCLGGGHLDGNHQV-VDLGTGA 82
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGKVFACRIQE 134
GFP + ++ + ++ ++S KK F+R V+ A R + +
Sbjct: 83 GFPTLPLALMRAELQ---FTPVDSTRKKVEFVRATAEALGLQNVRPVAGRAET----LTR 135
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
P+ D + RA+A L L E + P+L
Sbjct: 136 QPEHRDRYDRVVVRAVAALPILAELALPFL 165
>gi|257124928|ref|YP_003163042.1| methyltransferase GidB [Leptotrichia buccalis C-1013-b]
gi|257048867|gb|ACV38051.1| methyltransferase GidB [Leptotrichia buccalis C-1013-b]
Length = 240
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 34 FLFLKWSKK--INLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITS 90
FL L ++K +NL + + +H DSL + + ++ +ID+G+G GFPG++ +
Sbjct: 36 FLELLYNKNQIMNLTAIRDKKGMLEKHFIDSLLLTKVINDDEKSFIDVGTGAGFPGLVLA 95
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT----TCDVIS 146
I + LV +S KK F+ V+++ + + + ++I + DV
Sbjct: 96 IYYPEKKYLLV---DSVRKKIEFINEVIKELNLQN--VTTSFERSEELIKDKRESFDVAL 150
Query: 147 ARALADLDTLLEYSFPWL 164
R +A+L +LEY P++
Sbjct: 151 CRGVANLRIILEYMIPFI 168
>gi|121608051|ref|YP_995858.1| 16S rRNA methyltransferase GidB [Verminephrobacter eiseniae EF01-2]
gi|189040730|sp|A1WGT3|RSMG_VEREI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121552691|gb|ABM56840.1| methyltransferase GidB [Verminephrobacter eiseniae EF01-2]
Length = 239
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 37/184 (20%)
Query: 6 SNSILRANYLLNTY----NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
N +LRA + +++L F L KW++ NL + ++ +H+ D
Sbjct: 6 GNDVLRARLQSGAEVLAPGLDAAQIDRLMDFLALLQKWNRVYNLTALQDPQEMLTQHLLD 65
Query: 62 SLRVFQLHPY------------------------PSIWIDLGSGGGFPGIITSIQLSSIE 97
SL L P P +D+GSG G PG++ +I ++
Sbjct: 66 SLAA--LAPLRRQLAHLAHLAHSTGLAGPGQGAGPRRLLDVGSGAGLPGVVFAICCPQLD 123
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
V+ ++S KKA+F+ V + R R++ + T ++I RA A L
Sbjct: 124 ---VHCVDSVGKKAAFIGQVALQLRLRNLHGVHARVET---LTTPFEIICCRAFAALPDF 177
Query: 157 LEYS 160
+ ++
Sbjct: 178 VRWT 181
>gi|305431986|ref|ZP_07401153.1| 16S rRNA methyltransferase GidB [Campylobacter coli JV20]
gi|304445070|gb|EFM37716.1| 16S rRNA methyltransferase GidB [Campylobacter coli JV20]
Length = 199
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
N +L+ +N + KL+ + + K+++ NL +++ + +E L+ F
Sbjct: 7 NLILSDFN-EEDFRAKLKIYKEILNKFNRIHNLTQLKNIDENILDSIE-ILKYFDFSKAK 64
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACR 131
+I +D+GSG GFP I + L S +L E KKA+FLR + ++ V+ +
Sbjct: 65 NI-VDIGSGAGFPAIFLAFILPSN----FHLFEPNPKKAAFLRSIKIECNLTNLTVYKEK 119
Query: 132 IQEAPQMITTCDVISARALADLDTLLE 158
++ D+I++RAL D+ L++
Sbjct: 120 VENYKSSF-KADIITSRALMDVKPLIK 145
>gi|298736675|ref|YP_003729203.1| ribosomal RNA small subunit methyltransferase G [Helicobacter
pylori B8]
gi|298355867|emb|CBI66739.1| ribosomal RNA small subunit methyltransferase G [Helicobacter
pylori B8]
Length = 178
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSELE-PQITDALKPLEFVKDFKSCLDIGSGAGLPAI- 62
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ L E + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 63 -PLALEKPETKFI-LLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQCFLKDK 139
>gi|317401628|gb|EFV82254.1| ribosomal RNA small subunit methyltransferase G [Achromobacter
xylosoxidans C54]
Length = 229
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---------PSIWIDLGSGGGFPGII 88
+W++ NL + + ++H+ DSL + P+ P+ D+GSGGG PG++
Sbjct: 44 RWNRTYNLTAIRDPQQMLVQHLFDSLAA--VGPFSEALGAPGTPAKIYDVGSGGGLPGVV 101
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT-----CD 143
++ V I++ KK +F+R + G + +Q I T C+
Sbjct: 102 LAVMRPEWS---VTCIDAVEKKTAFVRQM------SGALALPNLQARHARIETLEPAGCN 152
Query: 144 VISARALADLD 154
++++RA A L+
Sbjct: 153 IVTSRAFASLE 163
>gi|319778789|ref|YP_004129702.1| Glucose inhibited division protein [Taylorella equigenitalis MCE9]
gi|317108813|gb|ADU91559.1| Glucose inhibited division protein [Taylorella equigenitalis MCE9]
Length = 223
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 20/139 (14%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----------QLHPYPSIWIDL 78
+EY L LKW+K NL S D H+ D L + + + +D+
Sbjct: 29 IEYINLL-LKWNKTYNLTSIKNELDALKLHILDCLSIINPLRDFLNNKEGNTQTKTVVDV 87
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ--EA 135
GSGGG P I+ +I + + V+ +E KK +F++ V K RI+
Sbjct: 88 GSGGGLPAIVLAIVMKNFSIYSVDAVE---KKTAFVKAVASTLKLSNLKSIHTRIENFNI 144
Query: 136 PQMITTCDVISARALADLD 154
P+ I D+ +RA A LD
Sbjct: 145 PEDI---DIFISRAFASLD 160
>gi|210134579|ref|YP_002301018.1| 16S rRNA methyltransferase GidB [Helicobacter pylori P12]
gi|210132547|gb|ACJ07538.1| glucose inhibited division protein B [Helicobacter pylori P12]
Length = 178
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYVRILLEWNQTHNLSGAKRLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|167582845|ref|ZP_02375719.1| methyltransferase GidB [Burkholderia thailandensis TXDOH]
Length = 230
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-----DLGSGGGFPG 86
+ L KW+ NL + I+H+ DSL + P+ D+GSGGG PG
Sbjct: 42 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV---PHLGARGAAAALDVGSGGGLPG 98
Query: 87 IITSIQLSSIEGGLVNLIESK----NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
I+ +I L + L ++++ K N+ + L+ + + G+V R +
Sbjct: 99 IVLAIALPGWQVTLNDIVQKKSAFQNQAKAELK-LGNLSVVTGRVETLR--PGADVQGKF 155
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 156 DVIVSRAFADL 166
>gi|332289272|ref|YP_004420124.1| 16S rRNA methyltransferase GidB [Gallibacterium anatis UMN179]
gi|330432168|gb|AEC17227.1| 16S rRNA methyltransferase GidB [Gallibacterium anatis UMN179]
Length = 206
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S ++ ++H+ DSL V + +ID+G+G G PG+ +I
Sbjct: 30 LLHKWNKAYNLTSVRDPQEMLVKHILDSL-VVSRYLVGERFIDVGTGPGLPGLPLAI--- 85
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADL 153
+ L++S K+ SF+R V++ + R++E Q D + +RA A L
Sbjct: 86 ANPDKTFYLLDSLGKRISFIRNAVRELGLTNVEPVLSRVEEY-QPEQKFDGVLSRAFASL 144
Query: 154 DTLLEY 159
+ ++
Sbjct: 145 ADMTQW 150
>gi|15611430|ref|NP_223081.1| 16S rRNA methyltransferase GidB [Helicobacter pylori J99]
gi|7387704|sp|Q9ZM61|RSMG_HELPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|4154892|gb|AAD05942.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Helicobacter pylori J99]
Length = 178
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSELE-PQITDALKPLEFVKDFKSCLDIGSGAGLPAI- 62
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ L E + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 63 -PLALEKPEAQFI-LLEPRVKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|119776786|ref|YP_929526.1| 16S rRNA methyltransferase GidB [Shewanella amazonensis SB2B]
gi|166224610|sp|A1SBV0|RSMG_SHEAM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119769286|gb|ABM01857.1| glucose-inhibited division protein B [Shewanella amazonensis
SB2B]
Length = 206
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F L KW+K NL S RH+ DSL V H S +ID+G+G G PGI +I
Sbjct: 28 FVALLDKWNKAYNLTSVREPAQMLTRHILDSL-VVSPHLVGSRFIDVGTGPGLPGIPLAI 86
>gi|317012223|gb|ADU82831.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Lithuania75]
Length = 178
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYACILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|240047159|ref|YP_002960547.1| 16S rRNA methyltransferase GidB [Mycoplasma conjunctivae HRC/581]
gi|239984731|emb|CAT04705.1| Ribosomal RNA small subunit methyltransferase [Mycoplasma
conjunctivae]
Length = 204
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFP I I +I+ + ++ES K+ FL+ V + + + R++
Sbjct: 73 VDIGSGVGFPSIPYLIFNPNID---LTIVESLQKRCDFLKLVANELGLKFNLVCDRMENV 129
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
Q D+++ARA++ LD L++ +
Sbjct: 130 DQKF---DILTARAVSSLDKLIKLT 151
>gi|152978018|ref|YP_001343647.1| glucose-inhibited division protein B [Actinobacillus succinogenes
130Z]
gi|171472939|sp|A6VL65|RSMG_ACTSZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150839741|gb|ABR73712.1| methyltransferase GidB [Actinobacillus succinogenes 130Z]
Length = 211
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
KW+K NL S ++ ++H+ DSL V PY +ID+G+G G PG+ +I +
Sbjct: 41 KWNKAYNLTSVRDPQEMLVKHILDSLVV---SPYLRGERFIDVGTGPGLPGLPLAI--IN 95
Query: 96 IEGGLVNLIESKNKKASFLRYVVQK 120
+ V L++S K+ SF+R V++
Sbjct: 96 PDKKFV-LLDSLGKRMSFIRNAVRE 119
>gi|33591277|ref|NP_878921.1| glucose inhibited division protein B [Bordetella pertussis Tohama
I]
gi|33594725|ref|NP_882368.1| glucose inhibited division protein B [Bordetella parapertussis
12822]
gi|55976491|sp|Q7W0S9|RSMG_BORPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976492|sp|Q7W2I0|RSMG_BORPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33564801|emb|CAE39743.1| glucose inhibited division protein B [Bordetella parapertussis]
gi|33570919|emb|CAE40382.1| glucose inhibited division protein B [Bordetella pertussis Tohama
I]
gi|332380679|gb|AEE65526.1| glucose inhibited division protein B [Bordetella pertussis CS]
Length = 230
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 23/141 (16%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW-------ID 77
+KL + +W++ NL + ++H+ DSL V P+ D
Sbjct: 32 QKLLRYIEQMQRWNRTYNLTAIRDPGQMLVQHLFDSLSVVAPLERGLPAAGSGARVKLFD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PG++ +I + + V +++ KK +F+R + G + +Q A
Sbjct: 92 VGSGGGLPGVVLAIMRAHWD---VTCVDAVEKKTAFVRQMA------GALGLPNLQAAHT 142
Query: 138 MI-----TTCDVISARALADL 153
I CDV+ +RA A L
Sbjct: 143 RIEQLEPAQCDVVISRAFASL 163
>gi|206890813|ref|YP_002248427.1| methyltransferase GidB [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742751|gb|ACI21808.1| methyltransferase GidB [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 223
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
KW+K NL S ++ ++H DSL + P D+G+G GFPGI +I
Sbjct: 45 KWNKAYNLTSIEDEKEIIVKHFIDSLLYLCFISENPLSIADIGTGAGFPGIPIAIVRPR- 103
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDT 155
+ LIE KK +FL+ + +K ++ + A ++ D++ +RAL +
Sbjct: 104 --AKITLIEPSWKKNAFLKNIKRKLELENIEIIKAK---AEEIHNKFDIVISRALWSIKD 158
Query: 156 LLEY 159
+++
Sbjct: 159 FIKH 162
>gi|237738382|ref|ZP_04568863.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
mortiferum ATCC 9817]
gi|229420262|gb|EEO35309.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
mortiferum ATCC 9817]
Length = 233
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G GFPG++ +I +I L++S KK FL+ V + ++ R ++
Sbjct: 72 IDVGTGAGFPGMVLAIFNENIR---FTLMDSIGKKTKFLQMVKDELGLENVEIVTSRAED 128
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + + D+ R ++ L T+LEY P+L ++
Sbjct: 129 FISDEKRESYDLGLCRGVSKLSTILEYIIPFLKEE 163
>gi|84497200|ref|ZP_00996022.1| glucose-inhibited division protein B [Janibacter sp. HTCC2649]
gi|84382088|gb|EAP97970.1| glucose-inhibited division protein B [Janibacter sp. HTCC2649]
Length = 230
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 19/169 (11%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ L V R+ + F + L+ V W RHV +
Sbjct: 6 ADATGALSTAAPSGAAVVFRDRMPAATRFVEILADTGVTHGLIGPREVPRLWERHVLNCA 65
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--- 120
+ P ++ ID+GSG G PG+ +I ++ ++L+E ++ +L V
Sbjct: 66 VIEDAFPESAMLIDVGSGAGLPGVALAIARPDLD---IHLVEPMQRRTDWLTTTVTDLGL 122
Query: 121 ---TAARGKVFACRIQEAPQMITTCDV--ISARALADLDTLLEYSFPWL 164
T RG+ A + I ++ARA+A + L + P L
Sbjct: 123 DNVTVHRGR--------AEEFIGVLSAPWVTARAVARIAKLARWCVPLL 163
>gi|107024503|ref|YP_622830.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia AU 1054]
gi|116688118|ref|YP_833741.1| methyltransferase GidB [Burkholderia cenocepacia HI2424]
gi|122978515|sp|Q1BR98|RSMG_BURCA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039488|sp|A0K2X1|RSMG_BURCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|105894692|gb|ABF77857.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia cenocepacia AU
1054]
gi|116646207|gb|ABK06848.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia cenocepacia
HI2424]
Length = 228
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPMQMLIQHILDSLSIVPHLRGRTSARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMITTCD 143
I+ +I + L ++++ K+ + +R + + G+V + +Q ++ D
Sbjct: 97 IVLAIVEPGWQVTLNDIVQKKSAFQTQMRAELKLANLSVVTGRVES--LQPGVEVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|317013827|gb|ADU81263.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Gambia94/24]
Length = 178
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAI- 62
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ L E + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 63 -PLALEKPEAQFI-LLEPRIKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSRCFLKDK 139
>gi|217031610|ref|ZP_03437115.1| hypothetical protein HPB128_21g168 [Helicobacter pylori B128]
gi|216946810|gb|EEC25406.1| hypothetical protein HPB128_21g168 [Helicobacter pylori B128]
Length = 253
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSELE-PQITDALKPLEFVKDFKSCLDIGSGAGLPAI- 62
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ L E + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 63 -PLALEKPETKFI-LLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQCFLKDK 139
>gi|154508232|ref|ZP_02043874.1| hypothetical protein ACTODO_00726 [Actinomyces odontolyticus ATCC
17982]
gi|153797866|gb|EDN80286.1| hypothetical protein ACTODO_00726 [Actinomyces odontolyticus ATCC
17982]
Length = 220
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 33 YFLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIIT 89
Y L+ +I L+ +E W RH+ +S V P +D+GSG G PGI+
Sbjct: 34 YARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLDFMPRKDGRQVLDVGSGSGLPGIVI 93
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+ ++ V+L E ++ +L VV+ E + DV++ARA
Sbjct: 94 AACRPELD---VHLAEPMARRVEWLMDVVEDLGLDNVTIHQARAEELRGKGKADVVTARA 150
Query: 150 LADLDTLLEYS 160
+A++ L+ +
Sbjct: 151 VANMSKLVRMT 161
>gi|307297770|ref|ZP_07577576.1| methyltransferase GidB [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917030|gb|EFN47412.1| methyltransferase GidB [Thermotogales bacterium mesG1.Ag.4.2]
Length = 225
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+Y + L S NL S E H+ED++ F+ ID+GSGGG PG++
Sbjct: 15 KYEKLIELMLSSPHNLSSIKEFERAMTVHIEDTIIPFEGSSLSGRCIDIGSGGGIPGLVL 74
Query: 90 SIQLSSIEGGLVNLIESKNKK-ASFLRYV----VQKTAARGKVFACRIQEAPQMITTCDV 144
+I L+ I K ++ F R + V AR + FA +EA + T D
Sbjct: 75 AISFPKSNWTLLESIAKKTREIERFARDLDLTNVAVKTARAEEFA---KEAGE---TFDS 128
Query: 145 ISARALADLDTLLEYSFPWL 164
RA+ D LE + P +
Sbjct: 129 AFLRAVGRCDISLELAAPLV 148
>gi|193806325|sp|Q6MMJ3|RSMG2_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 2;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 2; Short=16S rRNA m7G
methyltransferase 2
Length = 255
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS ++L +FY L + +K N + D I+H DS+ + + +D+G+
Sbjct: 32 VSHSQRQQLAHFYRLLMLNQEKENFTRLLKLRDVAIKHFIDSIIIMKYTDLQFPLLDVGT 91
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
G GFPGI I + + L E ++ FL++V
Sbjct: 92 GPGFPGIPLKIMYPDQQ---ILLGEGVQRRVEFLKHV 125
>gi|188527194|ref|YP_001909881.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Shi470]
gi|188143434|gb|ACD47851.1| glucose-inhibited division protein B [Helicobacter pylori Shi470]
gi|308063246|gb|ADO05133.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Sat464]
Length = 178
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|90415384|ref|ZP_01223318.1| Glucose inhibited division protein [marine gamma proteobacterium
HTCC2207]
gi|90332707|gb|EAS47877.1| Glucose inhibited division protein [marine gamma proteobacterium
HTCC2207]
Length = 222
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S E +KL + L + W+K NL + H+ DSL V H ID+G+G
Sbjct: 27 SAEQRDKLLAYLQLLITWNKAYNLTAIRDPGQMIRLHLLDSLAVLP-HVVGKRLIDVGTG 85
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
G PGI +I + L++S KK FL
Sbjct: 86 AGLPGIPLAIMCPDRD---FTLLDSNGKKTRFL 115
>gi|293191006|ref|ZP_06609050.1| 16S rRNA methyltransferase GidB [Actinomyces odontolyticus F0309]
gi|292820693|gb|EFF79659.1| 16S rRNA methyltransferase GidB [Actinomyces odontolyticus F0309]
Length = 220
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 33 YFLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIIT 89
Y L+ +I L+ +E W RH+ +S V P +D+GSG G PGI+
Sbjct: 34 YARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLDFMPRKDGRQVLDVGSGSGLPGIVI 93
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+ ++ V+L E ++ +L VV+ E + DV++ARA
Sbjct: 94 AACRPELD---VHLAEPMARRVEWLMDVVEDLGLDNVTIHQARAEELRGKGKADVVTARA 150
Query: 150 LADLDTLLEYS 160
+A++ L+ +
Sbjct: 151 VANMSKLVRMT 161
>gi|42523138|ref|NP_968518.1| methyltransferase gidB [Bdellovibrio bacteriovorus HD100]
gi|39575343|emb|CAE79511.1| Methyltransferase gidB [Bdellovibrio bacteriovorus HD100]
Length = 288
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS ++L +FY L + +K N + D I+H DS+ + + +D+G+
Sbjct: 65 VSHSQRQQLAHFYRLLMLNQEKENFTRLLKLRDVAIKHFIDSIIIMKYTDLQFPLLDVGT 124
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
G GFPGI I + + L E ++ FL++V
Sbjct: 125 GPGFPGIPLKIMYPDQQ---ILLGEGVQRRVEFLKHV 158
>gi|308061735|gb|ADO03623.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Cuz20]
Length = 178
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|38234911|ref|NP_940678.1| glucose-inhibited division protein B [Corynebacterium diphtheriae
NCTC 13129]
gi|55976428|sp|Q6NE98|RSMG_CORDI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|38201176|emb|CAE50900.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 223
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ V W RH+ + + + D+GSG G PGI +I + + L
Sbjct: 48 GFIGPREVPKLWSRHLLNCAVIGEAMDENIRVADIGSGAGLPGIPLAIARPDL---TITL 104
Query: 104 IESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
IE K++ FL V +K T RG+ ++E + DV ++RA+A L L
Sbjct: 105 IEPLLKRSVFLGEVKEKLELDNVTVIRGRAEEKAVRE---QLGLVDVATSRAVAPLGKLA 161
Query: 158 EYSFP 162
+S P
Sbjct: 162 GWSLP 166
>gi|308182553|ref|YP_003926680.1| 16S rRNA methyltransferase GidB [Helicobacter pylori PeCan4]
gi|308064738|gb|ADO06630.1| 16S rRNA methyltransferase GidB [Helicobacter pylori PeCan4]
Length = 178
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFVKDFKSCLDIGSGAGLPAI- 62
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ L E + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 63 -PLALEKPETQFI-LLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|282880735|ref|ZP_06289436.1| 16S rRNA methyltransferase GidB [Prevotella timonensis CRIS
5C-B1]
gi|281305397|gb|EFA97456.1| 16S rRNA methyltransferase GidB [Prevotella timonensis CRIS
5C-B1]
Length = 206
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGF 84
++L L+ W+ KIN++S ++ + HV SL + + + S +D G+GGGF
Sbjct: 17 KQLSMLQDLYNDWNAKINVISRKDIQQLYEHHVLHSLAIAKFISFKSGTNILDFGTGGGF 76
Query: 85 PGIITSI 91
PGI +I
Sbjct: 77 PGIPLAI 83
>gi|325856871|ref|ZP_08172369.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola CRIS 18C-A]
gi|327314584|ref|YP_004330021.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola F0289]
gi|325483244|gb|EGC86221.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola CRIS 18C-A]
gi|326944705|gb|AEA20590.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola F0289]
Length = 207
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGGG 83
E++ L+ W+ KIN+VS +++ + H+ SL R + ++ +D G+GGG
Sbjct: 18 EQIAALDVLYHDWNAKINVVSRKDIDNLYEHHILHSLAIARRIRFREGTNV-LDFGTGGG 76
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FPGI +I LI+ KK + V + V Q + D
Sbjct: 77 FPGIPLAILFPESN---FKLIDGTGKKVKVAKEVAD-SIGLDNVLPVH-QRGEEEKGKFD 131
Query: 144 VISARALADLDTLLE 158
I +RA+ L L++
Sbjct: 132 FIVSRAVMPLPDLMK 146
>gi|209696453|ref|YP_002264384.1| 16S rRNA methyltransferase GidB [Aliivibrio salmonicida LFI1238]
gi|208010407|emb|CAQ80753.1| methyltransferase GidB (glucose inhibited division protein B)
[Aliivibrio salmonicida LFI1238]
Length = 209
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WI 76
VS E+L + L KW+K NL S + I+H+ DS+ V P++ +I
Sbjct: 19 VSELQKEQLLGYVALLHKWNKAYNLTSVRNPSEMVIKHILDSIVV-----SPNLSGERFI 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+G+G G PGI +I L++S K+ F++ V+ +
Sbjct: 74 DVGTGPGLPGIPLAIMNPEKS---FTLLDSLGKRIRFIKQVIHE 114
>gi|193216516|ref|YP_001999758.1| glucose-inhibited division protein B [Mycoplasma arthritidis
158L3-1]
gi|193001839|gb|ACF07054.1| glucose-inhibited division protein B [Mycoplasma arthritidis
158L3-1]
Length = 173
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYPSIWIDLGSGGGFP 85
+Y+L ++K NL S E + +S+ +FQ L+ + +D+GSG GFP
Sbjct: 29 YYYLIETENQKYNLTGFSD-EKLICEGLIESILIFQAITSSILNLDSKVVLDIGSGVGFP 87
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
+ I + + + E NK+ +FL V+ K + E + D I
Sbjct: 88 ILPYFIINPTFN---LTIYEPINKRVNFLEMVIAKLNLQNITIKKIRAEDSKETEKFDFI 144
Query: 146 SARALADLDTLLEYSFPWLYQ 166
SARA+++L L+E S L Q
Sbjct: 145 SARAVSELKNLMEISHHLLKQ 165
>gi|317180720|dbj|BAJ58506.1| glucose-inhibited division protein B [Helicobacter pylori F32]
Length = 178
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRVKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|299142647|ref|ZP_07035777.1| 16S rRNA methyltransferase GidB [Prevotella oris C735]
gi|298575862|gb|EFI47738.1| 16S rRNA methyltransferase GidB [Prevotella oris C735]
Length = 209
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQ 92
L+ W+ KIN++S + + + HV SL + + + + +D G+GGGFPGI +I
Sbjct: 26 LYRDWNSKINVISRKDINNLYEHHVLHSLAIAKAIRFKEGTEILDFGTGGGFPGIPLAIM 85
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
LI+ KK V Q R E + D I +RA+
Sbjct: 86 FPQCR---FRLIDGTGKKIRVATEVAQAIGLTNVEALHRRGEEEK--GKYDFIVSRAVMQ 140
Query: 153 LDTLLE 158
L L++
Sbjct: 141 LPDLMK 146
>gi|189039666|sp|A3NF53|RSMG_BURP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 232
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + H + +D+GSGGG PG++
Sbjct: 43 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 102
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 103 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--SGADVPAKF 157
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 158 DVIVSRAFADL 168
>gi|281425234|ref|ZP_06256147.1| 16S rRNA methyltransferase GidB [Prevotella oris F0302]
gi|281400700|gb|EFB31531.1| 16S rRNA methyltransferase GidB [Prevotella oris F0302]
Length = 209
Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQ 92
L+ W+ KIN++S + + + HV SL + + + + +D G+GGGFPGI +I
Sbjct: 26 LYRDWNSKINVISRKDINNLYEHHVLHSLAIAKAIRFKEGTEILDFGTGGGFPGIPLAIM 85
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQ 119
LI+ KK V Q
Sbjct: 86 FPQCR---FRLIDGTGKKICVATEVAQ 109
>gi|294505875|ref|YP_003569933.1| Methyltransferase gidB [Salinibacter ruber M8]
gi|294342203|emb|CBH22981.1| Methyltransferase gidB [Salinibacter ruber M8]
Length = 215
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIWIDL 78
+++ E E+L+ F L++++++NL+S T F RH+ L + P +D
Sbjct: 11 SLTAEQREQLDRFREQLLRFNQRVNLISPETEGAFRTRHLLHCLTLTARDFPAGCTVVDW 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
G+GGG P I + + E +V ++S KK+ +R + ++
Sbjct: 71 GTGGGLPAI--PLAICHPEATVVG-VDSVGKKSRAVRTIARR 109
>gi|217033323|ref|ZP_03438754.1| hypothetical protein HP9810_9g76 [Helicobacter pylori 98-10]
gi|216944264|gb|EEC23689.1| hypothetical protein HP9810_9g76 [Helicobacter pylori 98-10]
Length = 178
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELEPQ-ITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQHFLKDK 139
>gi|254184035|ref|ZP_04890626.1| methyltransferase GidB [Burkholderia pseudomallei 1655]
gi|189039672|sp|A3P103|RSMG_BURP0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|184214567|gb|EDU11610.1| methyltransferase GidB [Burkholderia pseudomallei 1655]
Length = 232
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + H + +D+GSGGG PG++
Sbjct: 43 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 102
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 103 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVPAKF 157
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 158 DVIVSRAFADL 168
>gi|254303503|ref|ZP_04970861.1| glucose-inhibited cell division protein B [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323695|gb|EDK88945.1| glucose-inhibited cell division protein B [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 232
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + A +V R +
Sbjct: 71 LIDIGTGAGFPGMMLAI---FNEDKKFTLLDSVRKKTDFLELVKTELALNNVEVINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|148361202|ref|YP_001252409.1| glucose inhibited division protein B [Legionella pneumophila str.
Corby]
gi|296108538|ref|YP_003620239.1| glucose inhibited division protein B [Legionella pneumophila
2300/99 Alcoy]
gi|166224596|sp|A5II63|RSMG_LEGPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148282975|gb|ABQ57063.1| glucose inhibited division protein B [Legionella pneumophila str.
Corby]
gi|295650440|gb|ADG26287.1| glucose inhibited division protein B [Legionella pneumophila
2300/99 Alcoy]
Length = 208
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + I ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNHI-IDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALADLDT 155
L++S KK SFL V ++ + + R++ P D + +RA + L+
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQ--GFDTVISRAFSSLEQ 149
Query: 156 LLEYS 160
+++++
Sbjct: 150 MIKWT 154
>gi|76809860|ref|YP_331605.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710b]
gi|124386113|ref|YP_001027578.1| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10229]
gi|254298692|ref|ZP_04966143.1| methyltransferase GidB [Burkholderia pseudomallei 406e]
gi|254357416|ref|ZP_04973690.1| methyltransferase GidB [Burkholderia mallei 2002721280]
gi|123600830|sp|Q3JXU8|RSMG_BURP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039670|sp|Q62FS7|RSMG_BURMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039671|sp|A1V8U2|RSMG_BURMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76579313|gb|ABA48788.1| methyltransferase GidB [Burkholderia pseudomallei 1710b]
gi|148026480|gb|EDK84565.1| methyltransferase GidB [Burkholderia mallei 2002721280]
gi|157808557|gb|EDO85727.1| methyltransferase GidB [Burkholderia pseudomallei 406e]
Length = 232
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + H + +D+GSGGG PG++
Sbjct: 43 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 102
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 103 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVPAKF 157
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 158 DVIVSRAFADL 168
>gi|126442288|ref|YP_001060974.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 668]
gi|126221781|gb|ABN85287.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 668]
Length = 213
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + H + +D+GSGGG PG++
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 84 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--SGADVPAKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|167904863|ref|ZP_02492068.1| methyltransferase GidB [Burkholderia pseudomallei NCTC 13177]
Length = 213
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + H + +D+GSGGG PG++
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 84 LAIALP---GWRVTLNDVVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVSAKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|126454474|ref|YP_001068274.1| methyltransferase GidB [Burkholderia pseudomallei 1106a]
gi|242317084|ref|ZP_04816100.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106b]
gi|254194534|ref|ZP_04900965.1| methyltransferase GidB [Burkholderia pseudomallei S13]
gi|126228116|gb|ABN91656.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106a]
gi|169651284|gb|EDS83977.1| methyltransferase GidB [Burkholderia pseudomallei S13]
gi|242140323|gb|EES26725.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106b]
Length = 213
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---DLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + D+GSGGG PG++
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 84 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVPAKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|317177196|dbj|BAJ54985.1| glucose-inhibited division protein B [Helicobacter pylori F16]
Length = 178
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|54298882|ref|YP_125251.1| 16S rRNA methyltransferase GidB [Legionella pneumophila str. Paris]
gi|81601621|sp|Q5X0Z7|RSMG_LEGPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53752667|emb|CAH14102.1| hypothetical protein lpp2949 [Legionella pneumophila str. Paris]
Length = 208
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + I ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNHI-IDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALADLDT 155
L++S KK SFL V ++ + + R++ P D + +RA + L+
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQ--GFDTVISRAFSSLEQ 149
Query: 156 LLEYS 160
+++++
Sbjct: 150 MIKWT 154
>gi|320537497|ref|ZP_08037441.1| 16S rRNA methyltransferase GidB [Treponema phagedenis F0421]
gi|320145638|gb|EFW37310.1| 16S rRNA methyltransferase GidB [Treponema phagedenis F0421]
Length = 228
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSL--------RVFQLHPYPSIW--IDLGSGGGFPGI- 87
++ NLV + ++ I H+ DSL R +++ D GSG GFPGI
Sbjct: 40 FNSAFNLVKVDSEKELVINHILDSLAPWKIFADRFDAAKNTDAVYRFADAGSGSGFPGIP 99
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQMITTCDVIS 146
+ + LS LIE K+A+FL V V C I+++P+ D+++
Sbjct: 100 LACLFLSKNPAVQFTLIERMQKRAAFLENVCAVLNLTNVSVLQCPIEQSPE--HEYDIVA 157
Query: 147 ARALADLD 154
RA LD
Sbjct: 158 FRAFRPLD 165
>gi|317179222|dbj|BAJ57010.1| glucose-inhibited division protein B [Helicobacter pylori F30]
gi|317181726|dbj|BAJ59510.1| glucose-inhibited division protein B [Helicobacter pylori F57]
Length = 178
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|260579556|ref|ZP_05847427.1| 16S rRNA methyltransferase GidB [Corynebacterium jeikeium ATCC
43734]
gi|258602327|gb|EEW15633.1| 16S rRNA methyltransferase GidB [Corynebacterium jeikeium ATCC
43734]
Length = 222
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+Y FL ++ L+ V W RH+ +S + ++ +D+GSG G PGI
Sbjct: 34 DYAEFLATAGIER-GLLGPREVPRIWERHILNSAVLGEVIDEGCRVVDIGSGAGLPGIPL 92
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I ++ V L+E ++ +FL + + +V R ++ + + DV ++
Sbjct: 93 AIARPDLK---VQLLEPLLRRYNFLAEMNDQLNLGCEVVRGRAEDPTVVKALGGADVATS 149
Query: 148 RALADLDTLLEYSFPWL 164
RA+A L L +S P +
Sbjct: 150 RAVAPLGKLTRWSLPLV 166
>gi|54295715|ref|YP_128130.1| hypothetical protein lpl2803 [Legionella pneumophila str. Lens]
gi|81601155|sp|Q5WSS3|RSMG_LEGPL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53755547|emb|CAH17046.1| hypothetical protein lpl2803 [Legionella pneumophila str. Lens]
Length = 208
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + I ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNHI-IDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALADLDT 155
L++S KK SFL V ++ + + R++ P D + +RA + L+
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQ--GFDTVISRAFSSLEQ 149
Query: 156 LLEYS 160
+++++
Sbjct: 150 MIKWT 154
>gi|254186500|ref|ZP_04893017.1| methyltransferase GidB [Burkholderia pseudomallei Pasteur 52237]
gi|157934185|gb|EDO89855.1| methyltransferase GidB [Burkholderia pseudomallei Pasteur 52237]
Length = 232
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + H + +D+GSGGG PG++
Sbjct: 43 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 102
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 103 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVSAKF 157
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 158 DVIVSRAFADL 168
>gi|256370766|ref|YP_003108591.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
SMDSEM]
gi|256009558|gb|ACU52918.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
SMDSEM]
Length = 232
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
+ K IN+ S + F+ +H +L + ++ + SI +D+G+GGGFPGI +I +
Sbjct: 34 YYKNINIFSKKSFNGFFEKHCIHTLSISKIMKFLKKSIVLDVGTGGGFPGIPLAIMFNE 92
>gi|307611763|emb|CBX01471.1| hypothetical protein LPW_31591 [Legionella pneumophila 130b]
Length = 208
Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + I ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNHI-IDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALADLDT 155
L++S KK SFL V ++ + + R++ P D + +RA + L+
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQ--GFDTVISRAFSSLEQ 149
Query: 156 LLEYS 160
+++++
Sbjct: 150 MIKWT 154
>gi|53721014|ref|YP_110000.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei K96243]
gi|251767389|ref|ZP_02267062.2| 16S rRNA methyltransferase GidB [Burkholderia mallei PRL-20]
gi|262193307|ref|YP_001082524.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10247]
gi|81607635|sp|Q63PG9|RSMG_BURPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|294862466|sp|A2S6K9|RSMG_BURM9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|294862495|sp|A3MQI8|RSMG_BURM7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52211428|emb|CAH37419.1| methyltransferase GidB [Burkholderia pseudomallei K96243]
gi|243062886|gb|EES45072.1| 16S rRNA methyltransferase GidB [Burkholderia mallei PRL-20]
gi|261826012|gb|ABN03402.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10229]
gi|261835042|gb|ABO04723.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10247]
Length = 230
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---DLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + D+GSGGG PG++
Sbjct: 41 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 100
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 101 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVPAKF 155
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 156 DVIVSRAFADL 166
>gi|53724004|ref|YP_104450.1| 16S rRNA methyltransferase GidB [Burkholderia mallei ATCC 23344]
gi|67643080|ref|ZP_00441829.1| 16S rRNA methyltransferase GidB [Burkholderia mallei GB8 horse 4]
gi|121598363|ref|YP_994645.1| 16S rRNA methyltransferase GidB [Burkholderia mallei SAVP1]
gi|167721835|ref|ZP_02405071.1| methyltransferase GidB [Burkholderia pseudomallei DM98]
gi|167818022|ref|ZP_02449702.1| methyltransferase GidB [Burkholderia pseudomallei 91]
gi|167826385|ref|ZP_02457856.1| methyltransferase GidB [Burkholderia pseudomallei 9]
gi|167847904|ref|ZP_02473412.1| methyltransferase GidB [Burkholderia pseudomallei B7210]
gi|167896461|ref|ZP_02483863.1| methyltransferase GidB [Burkholderia pseudomallei 7894]
gi|167921078|ref|ZP_02508169.1| methyltransferase GidB [Burkholderia pseudomallei BCC215]
gi|217424010|ref|ZP_03455510.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 576]
gi|226193255|ref|ZP_03788865.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei Pakistan
9]
gi|237814357|ref|YP_002898808.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei MSHR346]
gi|254174686|ref|ZP_04881347.1| methyltransferase GidB [Burkholderia mallei ATCC 10399]
gi|254201526|ref|ZP_04907890.1| methyltransferase GidB [Burkholderia mallei FMH]
gi|254206864|ref|ZP_04913215.1| methyltransferase GidB [Burkholderia mallei JHU]
gi|254258661|ref|ZP_04949715.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710a]
gi|52427427|gb|AAU48020.1| methyltransferase GidB [Burkholderia mallei ATCC 23344]
gi|121227173|gb|ABM49691.1| methyltransferase GidB [Burkholderia mallei SAVP1]
gi|147747420|gb|EDK54496.1| methyltransferase GidB [Burkholderia mallei FMH]
gi|147752406|gb|EDK59472.1| methyltransferase GidB [Burkholderia mallei JHU]
gi|160695731|gb|EDP85701.1| methyltransferase GidB [Burkholderia mallei ATCC 10399]
gi|217393073|gb|EEC33095.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 576]
gi|225934855|gb|EEH30832.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei Pakistan
9]
gi|237506501|gb|ACQ98819.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei MSHR346]
gi|238524329|gb|EEP87762.1| 16S rRNA methyltransferase GidB [Burkholderia mallei GB8 horse 4]
gi|254217350|gb|EET06734.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710a]
Length = 213
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---DLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + D+GSGGG PG++
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 84 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVPAKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|325525644|gb|EGD03418.1| 16S rRNA methyltransferase GidB [Burkholderia sp. TJI49]
Length = 228
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWI-DLGSGGGFPG 86
L+Y L KW+ NL + + I+H+ DSL + L S + D+GSGGG PG
Sbjct: 38 LDYVALLG-KWNAVYNLTAIRDPKQMLIQHILDSLSIVPHLRGRASARVLDVGSGGGLPG 96
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRY---VVQKTAARGKVFACRIQEAPQMITTCD 143
I+ +I + L ++++ K+ + R + + G+V + +Q ++ D
Sbjct: 97 IVLAIVEPDWQITLNDIVQKKSAFQTQTRAELKLANLSVVTGRVES--LQPGVEVPEKFD 154
Query: 144 VISARALADL 153
+I +RA ADL
Sbjct: 155 MIVSRAFADL 164
>gi|315605514|ref|ZP_07880551.1| glucose inhibited division protein B [Actinomyces sp. oral taxon
180 str. F0310]
gi|315312781|gb|EFU60861.1| glucose inhibited division protein B [Actinomyces sp. oral taxon
180 str. F0310]
Length = 220
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 33 YFLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIIT 89
Y L+ +I L+ +E W RH+ +S V + P +D+GSG G PGI+
Sbjct: 34 YARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLEFMPSKRGRQVLDVGSGSGLPGIVI 93
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+ ++ V+L E ++ +L VV E + DV++ARA
Sbjct: 94 AACRPDLD---VHLAEPMARRVEWLMDVVDDLGLDNVTIHQARAEELRGKGKADVVTARA 150
Query: 150 LADLDTLLEYS 160
+A++ L+ +
Sbjct: 151 VANMSKLVRMT 161
>gi|157163908|ref|YP_001466523.1| methyltransferase GidB (glucose-inhibited divisionprotein B)
[Campylobacter concisus 13826]
gi|193806436|sp|A7ZCL5|RSMG_CAMC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112800649|gb|EAT97993.1| methyltransferase GidB [Campylobacter concisus 13826]
Length = 188
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EK++ + +F K++K +L + + + + ++ L +F L +I D+GSG GFP
Sbjct: 13 EKVKAYAQIFTKFNKVHSLSNYKDISEQVLDSIK-PLEIFDLSAKTAI--DVGSGAGFPA 69
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACRIQEAPQMITTCDVI 145
I ++ + + +L E KK+SFL Y ++ +V + +I+ A + T D+I
Sbjct: 70 IFLALAMPQTKW---HLFEPIAKKSSFLSYAKIELGLQNLEVHSQKIELADKF--TADLI 124
Query: 146 SARALADLDTLLE 158
++RAL+ L++
Sbjct: 125 TSRALSKTKELIK 137
>gi|23004582|ref|ZP_00047839.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Magnetospirillum
magnetotacticum MS-1]
Length = 143
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 20 NVSRETLEKLEYFYFLFL---KWSKKI-------NLVSSSTVEDFWIRHVEDSLRVFQLH 69
++ RE L +EYF F+ K+++++ L+ V W RH+ +S V
Sbjct: 12 DIPREAL--IEYFGDSFVAVEKFAERLRNEGELRGLIGPREVPRIWDRHILNSAAVVPFL 69
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
P + D+GSG G PG++ + V LIE ++ ++L + +
Sbjct: 70 PRTGLIADVGSGAGLPGVVIAAMRPE---ATVYLIEPMERRCAWLTEIAE 116
>gi|166989747|sp|Q4A6Q0|RSMG_MYCS5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|144574982|gb|AAZ43571.2| glucose inhibited division protein B [Mycoplasma synoviae 53]
Length = 225
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQE 134
+D+GSG GFP I ++ E +++ E K+ FL V QK T + ++ R +E
Sbjct: 70 LDIGSGVGFPAIPYALLR---ENNSIDIFEPIQKRVDFLNLVKQKLTLDKVNIYKQRAEE 126
Query: 135 APQMITTCDVISARALADLDTLLEYSF 161
Q DV+ ARA+ + T+L +F
Sbjct: 127 FSQK-NIYDVVVARAVGSVKTMLMAAF 152
>gi|317010660|gb|ADU84407.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SouthAfrica7]
Length = 178
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLNELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRMKRAAFLNYLKSVLPLSNIEIVKKRLEDYQNPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLNDK 139
>gi|237739896|ref|ZP_04570377.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
2_1_31]
gi|229423504|gb|EEO38551.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
2_1_31]
Length = 232
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + A ++ R +
Sbjct: 71 LIDIGTGAGFPGMMLAI---FNEDKNFTLLDSVRKKTDFLELVKNELALNNVEIINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDKREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|167913141|ref|ZP_02500232.1| methyltransferase GidB [Burkholderia pseudomallei 112]
Length = 213
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGII 88
+ L KW+ NL + I+H+ DSL + H + +D+GSGGG PG++
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 84 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVSAKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|71894174|ref|YP_278282.1| glucose-inhibited division protein B [Mycoplasma synoviae 53]
Length = 207
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-TAARGKVFACRIQE 134
+D+GSG GFP I ++ E +++ E K+ FL V QK T + ++ R +E
Sbjct: 52 LDIGSGVGFPAIPYALLR---ENNSIDIFEPIQKRVDFLNLVKQKLTLDKVNIYKQRAEE 108
Query: 135 APQMITTCDVISARALADLDTLLEYSF 161
Q DV+ ARA+ + T+L +F
Sbjct: 109 FSQK-NIYDVVVARAVGSVKTMLMAAF 134
>gi|294155312|ref|YP_003559696.1| S-adenosyl-L-methionine dependent methyltransferase [Mycoplasma
crocodyli MP145]
gi|291600437|gb|ADE19933.1| S-adenosyl-L-methionine dependent methyltransferase [Mycoplasma
crocodyli MP145]
Length = 232
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSIWIDLGSGGGFPGII 88
YF ++ + K+ ++ + W + +SL VF L P+ +D+G+G GFP I
Sbjct: 24 YFQMIEETNKVLNLTGFEGDKLWQEGIYESL-VFMLEVTETIKPNNILDIGAGAGFPSIP 82
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDVIS 146
++ + + + E K+ FL V+ K +VF R ++ + D+++
Sbjct: 83 YALTNPKQK---ITIYEPLKKRVDFLNQVITKLNLNNSVEVFPFRSEDIKKK-NIFDLVT 138
Query: 147 ARALADLDTLLEYSF 161
ARA+ D+ T+L SF
Sbjct: 139 ARAVGDVATMLMSSF 153
>gi|167740807|ref|ZP_02413581.1| methyltransferase GidB [Burkholderia pseudomallei 14]
Length = 213
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI---DLGSGGGFPGII 88
+ L KW+ NL + ++H+ DSL + D+GSGGG PG++
Sbjct: 24 YVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPHLGAHGAAAAALDVGSGGGLPGVV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTC 142
+I L G V L + +KK++F + + G+V R +
Sbjct: 84 LAIALP---GWRVTLNDIVHKKSAFQNQAKAELKLGNLSVVTGRVETLR--PGADVPAKF 138
Query: 143 DVISARALADL 153
DVI +RA ADL
Sbjct: 139 DVIVSRAFADL 149
>gi|91785987|ref|YP_546939.1| 16S rRNA methyltransferase GidB [Polaromonas sp. JS666]
gi|123165596|sp|Q12HF1|RSMG_POLSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91695212|gb|ABE42041.1| 16S rRNA m(7)G-527 methyltransferase [Polaromonas sp. JS666]
Length = 226
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---F 66
LRA ++ + +L + L KW+K NL + + H+ DSL
Sbjct: 8 LRAGLKALQLELTDSQVGQLLDYQDLIGKWTKVYNLTAVRDPVEMMTHHLLDSLAAVPPL 67
Query: 67 QLH------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ H + +D+GSG G PG++ +I + V +++ KKA+F++ Q
Sbjct: 68 RRHLRKTGQEQGACLLDVGSGAGLPGVVIAICCPEVA---VTCVDTVAKKAAFIK---QA 121
Query: 121 TAARGKVFACRIQEAPQMITTC-DVISARALADLDTLLEYS 160
A + + ITT DVI +RA A L ++S
Sbjct: 122 ALALKLPNLSGLHARVETITTLFDVICSRAFASLADFTQWS 162
>gi|312200973|ref|YP_004021034.1| methyltransferase GidB [Frankia sp. EuI1c]
gi|311232309|gb|ADP85164.1| methyltransferase GidB [Frankia sp. EuI1c]
Length = 251
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ E W RH+ + V + + +D+GSG G PG+ ++ + V
Sbjct: 37 GLIGPRETERLWDRHLLNCAVVAEAVGPDATVVDVGSGAGLPGVPLALARPDLR---VVF 93
Query: 104 IESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTC--DVISARALADLDTLLEY 159
+E ++ FLR VV+ A R V R +A DV ARA+A L+ L
Sbjct: 94 LEPMERRCVFLREVVEALGATSRMSVLRGRAPDAGMGRDGLRWDVAVARAVAPLERLGGM 153
Query: 160 SFP 162
P
Sbjct: 154 LLP 156
>gi|168063930|ref|XP_001783920.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664550|gb|EDQ51265.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 209
Score = 41.6 bits (96), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 19/138 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQL-----------HPYPSI-WIDLGSGGGFPGIITS 90
+NL + + RH+ DSL + + SI +D+GSG G PGI+ +
Sbjct: 1 MNLTAVTERGAMMDRHIADSLSLLPIIEGAHAAYCKSSAGESIKVVDIGSGAGLPGIVLA 60
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT---TCDVIS 146
I + + + L+ES K+ FL + KV R ++A + T D+
Sbjct: 61 IARPAWQ---LTLLESLQKRCDFLERAAEAAGLTNVKVLRSRAEDAGKDSTHREMYDIAV 117
Query: 147 ARALADLDTLLEYSFPWL 164
ARA+A++ L E P +
Sbjct: 118 ARAVAEMRILAELCLPLV 135
>gi|325576879|ref|ZP_08147494.1| glucose inhibited division protein B [Haemophilus parainfluenzae
ATCC 33392]
gi|325161085|gb|EGC73203.1| glucose inhibited division protein B [Haemophilus parainfluenzae
ATCC 33392]
Length = 203
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L KW+K NL S ++ ++H+ DS+ V + +ID+G+G G PG+ +I
Sbjct: 30 LLNKWNKAYNLTSVRDPQEMLVKHILDSI-VVSSYLQGDRFIDVGTGPGLPGLPLAIINP 88
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADL 153
+ + L++S K+ SF+R V++ + R++E Q D + +RA A L
Sbjct: 89 TKQ---FVLLDSLGKRISFIRNAVRELGLTNVEPVLSRVEEY-QSEQKFDGVLSRAFASL 144
Query: 154 DTLLEY 159
+ ++
Sbjct: 145 KDMTDW 150
>gi|291455686|ref|ZP_06595076.1| 16S rRNA methyltransferase GidB [Bifidobacterium breve DSM 20213]
gi|291382614|gb|EFE90132.1| 16S rRNA methyltransferase GidB [Bifidobacterium breve DSM 20213]
Length = 221
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 21/156 (13%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---------I 74
+ L +LE F+ + + L+ V+ W RH+ +S + PY
Sbjct: 17 DALPRLERFHDKLSQEGEPRGLIGPRDVDIIWERHILNSAAIV---PYVRKATDGARFRT 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+GSGGGFPG++T+ L LIE ++ +L V + + R
Sbjct: 74 VADVGSGGGFPGLVTACCLPECS---FTLIEPMERRVEWLAECVDLMGLKNVSIIRGRSD 130
Query: 134 EAPQMITTCD-----VISARALADLDTLLEYSFPWL 164
E + + V++ RA+A + L ++ P L
Sbjct: 131 EVINRVRKREMHPFAVVTCRAVAPMTKLSGWTLPLL 166
>gi|315635267|ref|ZP_07890544.1| glucose inhibited division protein B [Aggregatibacter segnis ATCC
33393]
gi|315476013|gb|EFU66768.1| glucose inhibited division protein B [Aggregatibacter segnis ATCC
33393]
Length = 209
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
KW+K NL S ++ ++H+ DS+ V PY + +ID+G+G G PG+ +I +
Sbjct: 40 KWNKAYNLTSVRDPQEMLVKHILDSIVV---SPYLQGNRFIDVGTGPGLPGLPLAI--VN 94
Query: 96 IEGGLVNLIESKNKKASFLRYVVQK 120
+ V L++S K+ SF+R +++
Sbjct: 95 PQKQFV-LLDSLGKRISFIRNAIRE 118
>gi|108562809|ref|YP_627125.1| 16S rRNA methyltransferase GidB [Helicobacter pylori HPAG1]
gi|123247021|sp|Q1CUC1|RSMG_HELPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|107836582|gb|ABF84451.1| glucose-inhibited division protein [Helicobacter pylori HPAG1]
Length = 178
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKCLSELE-PQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLENYQSPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|77166530|ref|YP_345055.1| glucose inhibited division protein [Nitrosococcus oceani ATCC
19707]
gi|254435732|ref|ZP_05049239.1| methyltransferase GidB [Nitrosococcus oceani AFC27]
gi|123593189|sp|Q3J6M1|RSMG_NITOC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76884844|gb|ABA59525.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosococcus oceani ATCC
19707]
gi|207088843|gb|EDZ66115.1| methyltransferase GidB [Nitrosococcus oceani AFC27]
Length = 214
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+IL LL + + ++ L + L KW++ NL + ++ +HV DSL +
Sbjct: 5 GENILEKGLLLLGVELDQSQVKVLLAYLRLLEKWNQHYNLTAIKNSKEMISKHVLDSLSI 64
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
I +D+GSG G PGI +I E L++S KK FL
Sbjct: 65 ESYLEGRRI-LDVGSGAGLPGIPLAIARPGCE---FVLLDSNAKKTRFL 109
>gi|149375654|ref|ZP_01893423.1| glucose-inhibited division protein B [Marinobacter algicola DG893]
gi|149360056|gb|EDM48511.1| glucose-inhibited division protein B [Marinobacter algicola DG893]
Length = 225
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ NL + R + DSL + + +D+G+GGG PGI +I L
Sbjct: 38 KWNRAYNLTAVREPRQMVSRQLLDSLSILPFVTADHL-LDVGAGGGLPGIPLAITLPDRR 96
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S +KK FL V + + E+ IS+RA LD L+
Sbjct: 97 ---FTLLDSNSKKTRFLTQCVLELGLKNVEIIHGRAESCDPAVRYPQISSRAFTALDNLV 153
Query: 158 EY 159
+
Sbjct: 154 NW 155
>gi|325269872|ref|ZP_08136482.1| glucose inhibited division protein B [Prevotella multiformis DSM
16608]
gi|324987845|gb|EGC19818.1| glucose inhibited division protein B [Prevotella multiformis DSM
16608]
Length = 207
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
E++ L+ W+ KIN++S +++ + H+ SL + + + + +D G+GGGF
Sbjct: 18 EQIAALDTLYHDWNAKINVISRKDIDNLYEHHILHSLAIAKRIRFREGTNVLDFGTGGGF 77
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PGI +I LI+ KK R + V Q + D
Sbjct: 78 PGIPLAILFPESN---FKLIDGTGKKIKVAREIADSIGLE-NVLPMH-QRGEEEKGKFDF 132
Query: 145 ISARALADLDTLLE 158
I +RA+ L L++
Sbjct: 133 IVSRAVMPLPELMK 146
>gi|148274157|ref|YP_001223718.1| 16S rRNA methyltransferase GidB [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166224582|sp|A5CVC1|RSMG_CLAM3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147832087|emb|CAN03060.1| putative methyltransferase, cell division protein [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 211
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +V+RE F + +++ L+ W RHV +S+ V L P +
Sbjct: 20 DRIDVARE-------FTAQLGQRGEELGLIGPLEPPRLWSRHVINSVLVAPLL-RPGLVG 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEA 135
D+G+G G PG++ +I ++ LIE ++ ++L V A V R +E
Sbjct: 72 DIGTGAGLPGLVLAIARPDVD---FVLIEPMERRVAWLEEQVAHLALGNVSVRRARAEEV 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
Q D ++ARA++ L+ + P +
Sbjct: 129 AQEF-NLDQVTARAVSAFAKLIPLTVPLV 156
>gi|189501182|ref|YP_001960652.1| 16S rRNA methyltransferase GidB [Chlorobium phaeobacteroides BS1]
gi|189496623|gb|ACE05171.1| methyltransferase GidB [Chlorobium phaeobacteroides BS1]
Length = 219
Score = 41.2 bits (95), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Query: 33 YFLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSGGGFPGIIT 89
Y L+ + +I NLVS +RH+ SL + HP+ +D+G+GGG PGI
Sbjct: 32 YAELLESANRITNLVSRKEQAPLLMRHIFHSLLIGLFHPFEPDEKVLDIGTGGGLPGIPL 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+I LI++ KK S ++ + V A + + + D + +R
Sbjct: 92 AIAFPDTR---FLLIDATGKKISACNGMIASLGLK-NVIAKKTRAEELKGVSFDTVLSRQ 147
Query: 150 LADLDTLLEYS 160
+A L L Y+
Sbjct: 148 VAPLRRLCAYT 158
>gi|328946990|ref|YP_004364327.1| ribosomal RNA small subunit methyltransferase G [Treponema
succinifaciens DSM 2489]
gi|328447314|gb|AEB13030.1| Ribosomal RNA small subunit methyltransferase G [Treponema
succinifaciens DSM 2489]
Length = 220
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-----------RVFQLHP 70
S+ + ++E + L+++K NL+ + + ++ + H+ DSL ++ +
Sbjct: 17 SQNQISRIETYISCVLEFNKTYNLMKADSTDELTVNHILDSLAAAPSIASFIQKIQEKKN 76
Query: 71 YPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
S+ I D+GSGGG PGI ++ E + L+E K+ FL V K
Sbjct: 77 IASLQIADIGSGGGCPGIPLAVAFP--EQNFM-LVERMEKRCGFLESAVCK 124
>gi|308179185|ref|YP_003918591.1| glucose-inhibited division protein B [Arthrobacter arilaitensis
Re117]
gi|307746648|emb|CBT77620.1| glucose-inhibited division protein B [Arthrobacter arilaitensis
Re117]
Length = 213
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RHV + + ++ + D+GSG G PG+ +I + ++ + L
Sbjct: 41 GLLGPREVPRLWSRHVLNCAVIEEVMEKDAEVADVGSGAGLPGLCLAIARADLK---LTL 97
Query: 104 IESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDV--ISARALADLDT 155
IE ++ +L V+ T RG+ A QM+ + ++ARA++ L
Sbjct: 98 IEPLERRCIWLSEVIDDLGLTNVTVMRGR--------AEQMVDVVNARYVTARAVSALTN 149
Query: 156 LLEYSFPWLY 165
L + P L+
Sbjct: 150 LAGLTIPLLH 159
>gi|256846127|ref|ZP_05551585.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
gi|256719686|gb|EEU33241.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
Length = 232
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + + ++ R +
Sbjct: 71 LIDIGTGAGFPGMMLAI---FNEDKKFTLLDSVRKKTDFLELVKNELNLKNVEIINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|256028337|ref|ZP_05442171.1| glucose inhibited division protein B [Fusobacterium sp. D11]
gi|289766263|ref|ZP_06525641.1| glucose inhibited division protein B [Fusobacterium sp. D11]
gi|289717818|gb|EFD81830.1| glucose inhibited division protein B [Fusobacterium sp. D11]
Length = 232
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + +V R +
Sbjct: 71 LIDIGTGAGFPGMMLAI---FNEDKKFTLLDSVRKKTDFLELVKSELGLNNIEVINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|34763618|ref|ZP_00144549.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27886716|gb|EAA23858.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 232
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + + ++ R +
Sbjct: 71 LIDIGTGAGFPGMMLTI---FNEDKKFTLLDSVRKKTDFLELVKNELNLKNVEIINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|57505846|ref|ZP_00371771.1| methyltransferase GidB [Campylobacter upsaliensis RM3195]
gi|57015876|gb|EAL52665.1| methyltransferase GidB [Campylobacter upsaliensis RM3195]
Length = 191
Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGG 83
L+++E + L K+++ NL +++ +++DS+ + D+GSG G
Sbjct: 13 LQRVEIYKNLLKKFNQIHNLTQLKNIDE----NIQDSIEILNFIDLTKAQNIADIGSGAG 68
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
FP I S L S L E KKA+FLR V + + +F ++Q
Sbjct: 69 FPAIFLSFLLDS----RFYLFEPNAKKAAFLRSVKIECELKNLTIFKEKVQNHKTEF-KA 123
Query: 143 DVISARALADLDTLLE 158
D I++RAL L++
Sbjct: 124 DFITSRALMRAKDLIQ 139
>gi|219110659|ref|XP_002177081.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411616|gb|EEC51544.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 346
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVS--SSTVEDFWIRHVEDSLR--VFQL 68
+ ++N +S E+L + W+ +INLVS TV + RHV S+ F
Sbjct: 84 DIVMNDLKLSGAQHEQLVSLCQAVVDWNDRINLVSRKDCTVATVFGRHVLPSIACCAFSE 143
Query: 69 HPYP----SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
P +D+G+GGGFPG+ +I ++ L++ + K
Sbjct: 144 DQNPLNTAKTLVDVGTGGGFPGLPLAIAYPDVQFVLLDSVGKK 186
>gi|78357336|ref|YP_388785.1| methyltransferase GidB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123552126|sp|Q30Z06|RSMG_DESDG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78219741|gb|ABB39090.1| 16S rRNA m(7)G-527 methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 229
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR-------HVEDSLRVFQLHPY 71
+ + + L + + KWS +NLV T + +R H++ LR
Sbjct: 22 FRLPPAAVTGLTVYLNMLQKWSAVMNLVGPRTWQPM-VRTLIVDSLHLDRFLRDAVPQCG 80
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
P IW D G+G G PGI + + G ++++ + K+ F++ V+ + G V
Sbjct: 81 PQIW-DFGAGAGLPGIPLRM---VWQHGEYHMVDVREKRTMFMQMVLARHPLSGTFVHRA 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSF-PW 163
R++ D ++ RA AD+ L+ +F PW
Sbjct: 137 RVE---------DFMADRAPADM--LVSRAFMPW 159
>gi|262066108|ref|ZP_06025720.1| 16S rRNA methyltransferase GidB [Fusobacterium periodonticum ATCC
33693]
gi|291380203|gb|EFE87721.1| 16S rRNA methyltransferase GidB [Fusobacterium periodonticum ATCC
33693]
Length = 232
Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + + ++ R +
Sbjct: 71 LIDIGTGAGFPGMMLTI---FNEDKNFTLLDSVRKKTDFLELVKNELSLNNVEIINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|94986432|ref|YP_605796.1| methyltransferase GidB [Deinococcus geothermalis DSM 11300]
gi|189039381|sp|Q1IVV7|RSMG_DEIGD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94556713|gb|ABF46627.1| 16S rRNA m(7)G-527 methyltransferase [Deinococcus geothermalis DSM
11300]
Length = 245
Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 27/158 (17%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID---- 77
S E L++ + S ++NL + D ++H DSL + W+D
Sbjct: 21 SAEHLDRFARLLVRLTEGSAQLNLTALHQERDIVLKHFVDSLTCLR-----GGWLDGAAR 75
Query: 78 ---LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--------VQKTAARGK 126
LG+G GFP + +I ++ LV L ++ KK F+ VQ R +
Sbjct: 76 VLDLGTGAGFPALPLAIVRPDLQ--LVAL-DATRKKVDFVERTARSLELNHVQPLTGRAE 132
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
P + D + RA+A L L E + P+L
Sbjct: 133 TLG----RDPAQRESYDRVVTRAVAALPILAELTLPFL 166
>gi|240168403|ref|ZP_04747062.1| glucose-inhibited division protein B [Mycobacterium kansasii ATCC
12478]
Length = 217
Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ E W RH+ + + +L +D+GSG G PG+ ++ + + L
Sbjct: 26 GLLGPREAERVWERHLLNCAVIGELVGAGERVVDIGSGAGLPGVPLALARPDLR---IIL 82
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISARALADLDTLLEYSF 161
+E +++ FL VV V R ++ + + DV +RA+A LD L ++S
Sbjct: 83 LEPLLRRSEFLCAVVADLELAVDVVRGRAEDPAVRKRLGASDVAVSRAVAPLDKLTKWSM 142
Query: 162 PWLYQ 166
L +
Sbjct: 143 ALLKR 147
>gi|52843085|ref|YP_096884.1| 16S rRNA methyltransferase GidB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|81603158|sp|Q5ZRJ1|RSMG_LEGPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52630196|gb|AAU28937.1| glucose inhibited division protein B [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 208
Score = 40.4 bits (93), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + I ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNHI-IDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISARALADLDT 155
L++S KK FL V ++ + + R++ P D + +RA + L+
Sbjct: 95 ---FVLLDSNGKKIRFLNEVKRQLNIKNIEPIQIRVENYHPNQ--GFDTVISRAFSSLEQ 149
Query: 156 LLEYS 160
+++++
Sbjct: 150 MIKWT 154
>gi|300115602|ref|YP_003762177.1| methyltransferase GidB [Nitrosococcus watsonii C-113]
gi|299541539|gb|ADJ29856.1| methyltransferase GidB [Nitrosococcus watsonii C-113]
Length = 214
Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSS 95
KW++ NL + E+ +HV DSL + PY +D+GSG G PGI ++
Sbjct: 37 KWNQHYNLTAIKNPEEMISKHVLDSLSI---EPYLEGRRILDVGSGAGLPGIPLAVAHPG 93
Query: 96 IEGGLVNLIESKNKKASFL 114
E L++S KK FL
Sbjct: 94 CE---FVLLDSNAKKTRFL 109
>gi|294783015|ref|ZP_06748339.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 1_1_41FAA]
gi|294479893|gb|EFG27670.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 1_1_41FAA]
Length = 232
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + +V R +
Sbjct: 71 LIDIGTGAGFPGMMLAI---FNEDKNFTLLDSVRKKTDFLELVKSELVLNNVEVINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|325965290|ref|YP_004243196.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323471377|gb|ADX75062.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 216
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
Y L +++ L+ + W RHV + + S D+GSG G PG+ +
Sbjct: 26 YVEHLATSGTER-GLIGPREIPRLWSRHVLNCAVIESEIAEGSHVADVGSGAGLPGLCLA 84
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARA 149
I +E + LIE ++ +L+ VV V R + A + DV++ARA
Sbjct: 85 IARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTVMRTRAELAVGQV-EADVVTARA 140
Query: 150 LADLDTLLEYSFPWL 164
++ L L + P L
Sbjct: 141 VSALSNLAGLTIPLL 155
>gi|309808177|ref|ZP_07702087.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
01V1-a]
gi|308168558|gb|EFO70666.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
01V1-a]
Length = 194
Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFP + I I+ + +I+S K+ +FL +V++ + R ++A
Sbjct: 19 DVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDA 75
Query: 136 PQMIT---TCDVISARALADLDTLLEYSFPWL 164
+ I DV++ARA+A + L EY P +
Sbjct: 76 GRNIKLRENFDVVTARAVARMSVLSEYCLPLV 107
>gi|270284634|ref|ZP_05966436.2| 16S rRNA methyltransferase GidB [Bifidobacterium gallicum DSM
20093]
gi|270276574|gb|EFA22428.1| 16S rRNA methyltransferase GidB [Bifidobacterium gallicum DSM
20093]
Length = 267
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
LR + LL +V L KL+ FY ++ L+ W RH+ +S V
Sbjct: 30 LRDSALL--ADVFGPALPKLQAFYAKLEAEGEERGLIGPRDQNILWERHLLNSAAVVPFM 87
Query: 69 -----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
H D+GSGGGFPG++ + L L+ +E +
Sbjct: 88 RQAFDHAQFKTVADVGSGGGFPGLVAAAMLPEARFTLIEPMERR 131
>gi|225155702|ref|ZP_03724190.1| glucose-inhibited division protein B [Opitutaceae bacterium TAV2]
gi|224803496|gb|EEG21731.1| glucose-inhibited division protein B [Opitutaceae bacterium TAV2]
Length = 221
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVED---SLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L +W+ KINLVS +E+ H ++++ +L ++ +D+G+GGGFPG+I +
Sbjct: 25 LHREWNAKINLVSRKDIENLEWHHYAPCIAAVKLLRLEAGATL-LDVGTGGGFPGLILAA 83
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
L +S KK + + + ++ R R + + D ++ RA+
Sbjct: 84 LYPQAH---FTLADSVGKKITVVADIARRLGLRN--VEARNVRVEILNRSYDFVTGRAVT 138
Query: 152 DLDTLLEYSFP 162
L ++ P
Sbjct: 139 SLPGFVQLVKP 149
>gi|254447601|ref|ZP_05061067.1| methyltransferase GidB [gamma proteobacterium HTCC5015]
gi|198262944|gb|EDY87223.1| methyltransferase GidB [gamma proteobacterium HTCC5015]
Length = 225
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L KW+K NL + H+ DSL + I +D+G+G G PGI +I
Sbjct: 40 YLALLEKWNKAYNLTAVRDPSKMVSHHLLDSLAIAPFIQGECI-LDVGTGAGLPGIPLAI 98
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARAL 150
+ L++S KK F+ ++ V R+ E + D I++RA
Sbjct: 99 AFPEWQ---FTLLDSNGKKTRFVSAAKRELGLTNVDVVQARV-ETLAVERGFDTITSRAF 154
Query: 151 ADLDTLLEYS 160
++L ++E++
Sbjct: 155 SELQPMMEWT 164
>gi|332298997|ref|YP_004440919.1| Ribosomal RNA small subunit methyltransferase G [Treponema
brennaborense DSM 12168]
gi|332182100|gb|AEE17788.1| Ribosomal RNA small subunit methyltransferase G [Treponema
brennaborense DSM 12168]
Length = 224
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RV------FQLHPYPSIWI- 76
KL+ + ++ +L + T +D ++HV DSL RV Q S I
Sbjct: 26 KLDAYVRELEMFNAAYDLCGADTRDDIVVKHVLDSLSAANRVKKFADAVQAEAGRSALIA 85
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
D+GSGGG PGI + LS G LIE +K+ +FL
Sbjct: 86 DVGSGGGLPGIPLAAALS---GHRFVLIERMSKRCAFL 120
>gi|332654804|ref|ZP_08420546.1| 16S rRNA methyltransferase GidB [Ruminococcaceae bacterium D16]
gi|332516147|gb|EGJ45755.1| 16S rRNA methyltransferase GidB [Ruminococcaceae bacterium D16]
Length = 237
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLG 79
V E+L + L L+ ++ +NL + + H+ DS + + +D+G
Sbjct: 18 VPEHAPEQLAEYGRLMLEKNQVMNLTAIREEDGVARLHMLDSAALLNWGDFEGKTLLDVG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G G PG+ I + S++ V L++S NK+ +L V + G + A + Q +
Sbjct: 78 TGAGLPGLPLKILVPSLQ---VTLLDSLNKRVDWLNEVCAQLGLEG-IQAVHARAEEQAL 133
Query: 140 TTC-----DVISARALA 151
DV++ARA+A
Sbjct: 134 VKGWRDGFDVVTARAVA 150
>gi|283850758|ref|ZP_06368045.1| glucose inhibited division protein [Desulfovibrio sp. FW1012B]
gi|283574001|gb|EFC21974.1| glucose inhibited division protein [Desulfovibrio sp. FW1012B]
Length = 232
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVS--------SSTVEDFWI 56
D+ ++ RA L + ++ E + + L ++ K+NLV ++ V D W
Sbjct: 9 DARAVTRAAAGLGRH-LTPEQAGTISGYLGLLARFRSKVNLVGPADWETVLATLVADSW- 66
Query: 57 RHVEDSLR------VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
HV D L V P + +D G+G G PGI + + G L+E++ K+
Sbjct: 67 -HVADFLSGPAGAAVLPPAGRPVLGLDFGAGAGLPGIPLR---AFFDRGEYVLLEAREKR 122
Query: 111 ASFLRYVVQK 120
A FL V +
Sbjct: 123 AFFLAEAVAR 132
>gi|220936470|ref|YP_002515369.1| glucose-inhibited division protein B [Thioalkalivibrio sp.
HL-EbGR7]
gi|219997780|gb|ACL74382.1| glucose-inhibited division protein B [Thioalkalivibrio sp.
HL-EbGR7]
Length = 210
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------DLGS 80
+ L + L +W+K NL + + H+ DSL V WI D+GS
Sbjct: 27 QPLGAYLELLARWNKAYNLTAVTEPRQMVTHHLLDSLAVLP-------WIRGSRIADIGS 79
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESK---NKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G G PGI +I + LV+ + K K+A +V +A +V R +E
Sbjct: 80 GAGLPGIPLAIARPELTVVLVDTVGKKVRFQKQAILELGLVNASAVHARVENYRPEE--- 136
Query: 138 MITTCDVISARALA 151
D + +RA A
Sbjct: 137 ---PFDTVISRAFA 147
>gi|51535158|dbj|BAD37870.1| methyltransferase-related-like [Oryza sativa Japonica Group]
gi|51535822|dbj|BAD37907.1| methyltransferase-related-like [Oryza sativa Japonica Group]
Length = 111
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---------IDLGSGGGFPGIITSIQL 93
+NL + + + RHV DSL V L P + +D+GSG G PG+I ++
Sbjct: 1 MNLTAVTDEGEVMTRHVADSLAV--LPPLERAYRGDLGGMRLVDVGSGAGLPGLILAVAR 58
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQ 119
S + L+ES K+ FL + V+
Sbjct: 59 PSWK---FTLLESMQKRCLFLEHAVE 81
>gi|15639931|ref|NP_219382.1| glucose-inhibited division protein B (gidB) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189026169|ref|YP_001933941.1| glucose-inhibited division protein B [Treponema pallidum subsp.
pallidum SS14]
gi|4033391|sp|O66106|RSMG_TREPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|238689352|sp|B2S4I3|RSMG_TREPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2988418|gb|AAC08056.1| gidB homolog [Treponema pallidum]
gi|3323268|gb|AAC65903.1| glucose-inhibited division protein B (gidB) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189018744|gb|ACD71362.1| glucose-inhibited division protein B [Treponema pallidum subsp.
pallidum SS14]
gi|291060301|gb|ADD73036.1| 16S rRNA methyltransferase GidB [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 222
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI-- 87
+Y L L ++ + +LV + E+ H+ DSL + D+GSG G PGI
Sbjct: 32 QYLEELIL-FNTRAHLVHVTHTEELITHHLLDSLSAWPHFTNARAIADIGSGAGLPGIPL 90
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC---DV 144
++ L + E L LIE + K+ +FL + AR + RI A T D
Sbjct: 91 ACALALYAPETEL-TLIERREKRIAFL----ENACARLALPHLRIVHADAHDLTPYTYDA 145
Query: 145 ISARALADLD 154
I+ RAL L+
Sbjct: 146 ITFRALCPLN 155
>gi|254282174|ref|ZP_04957142.1| methyltransferase GidB [gamma proteobacterium NOR51-B]
gi|219678377|gb|EED34726.1| methyltransferase GidB [gamma proteobacterium NOR51-B]
Length = 215
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
N+ + ++L + L L+W++ NL + +RH+ D+L + L + ID+G
Sbjct: 19 NLVQSQFDQLLDYVDLMLRWNRAYNLTAVREKGSMVVRHLLDALVISPLLQGKRL-IDVG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G G PG+ +I L++ KK FL V + + E +
Sbjct: 78 TGPGIPGVPLAIVQPERH---FTLLDGNGKKTRFLFQVKSQLGLSNIEIVEQRVENFRPH 134
Query: 140 TTCDVISARALADLDT 155
+ D + RA ADL T
Sbjct: 135 DSFDAVITRAFADLAT 150
>gi|330813394|ref|YP_004357633.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486489|gb|AEA80894.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Candidatus Pelagibacter sp. IMCC9063]
Length = 161
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 57 RHVEDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFL 114
RH+EDS ++ + ++ + +D+GSG GFPGI+ I + + ++++E +KK ++L
Sbjct: 3 RHIEDSAQLLKYINIEDNNILDIGSGAGFPGIVMYIIKNDLNINFKLDIVEKSSKKCTYL 62
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + C+ E I DV + + D TL+ +F L
Sbjct: 63 QEL------------CKFLEIDVAIHNHDVNNLKK-KDYTTLVSRAFKPL 99
>gi|237742803|ref|ZP_04573284.1| glucose inhibited division protein B [Fusobacterium sp. 4_1_13]
gi|229430451|gb|EEO40663.1| glucose inhibited division protein B [Fusobacterium sp. 4_1_13]
Length = 232
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + + ++ R +
Sbjct: 71 LIDIGTGAGFPGMMLAI---FNEDKKFILLDSVRKKTDFLELVKNELNLKNVEIINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|302346583|ref|YP_003814881.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica ATCC
25845]
gi|302150647|gb|ADK96908.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica ATCC
25845]
Length = 207
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSI 91
L+ W+ KIN++S +++ + H+ SL + + + + +D G+GGGFPG+ +I
Sbjct: 26 LYHDWNAKINVISRKDIDNLYEHHILHSLAIAKCINFREGTNVLDFGTGGGFPGVPLAI 84
>gi|260495538|ref|ZP_05815663.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
gi|260196880|gb|EEW94402.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
Length = 232
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I + + L++S KK FL V + + ++ R +
Sbjct: 71 LIDIGTGAGFPGMMLAIFNGNKK---FTLLDSVRKKTDFLELVKTELNLKNVEIINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|237743016|ref|ZP_04573497.1| glucose inhibited division protein B [Fusobacterium sp. 7_1]
gi|229433576|gb|EEO43788.1| glucose inhibited division protein B [Fusobacterium sp. 7_1]
Length = 232
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I + + L++S KK FL V + + ++ R +
Sbjct: 71 LIDIGTGAGFPGMMLAIFNGNKK---FTLLDSVRKKTDFLELVKTELNLKNVEIINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|62391943|ref|YP_227345.1| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum ATCC
13032]
gi|41223090|emb|CAF19035.1| GLUCOSE-INHIBITED DIVISION PROTEIN,
GIDB(S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE)
[Corynebacterium glutamicum ATCC 13032]
Length = 209
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 24 ETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
+ LEK + Y L S + + V W RH+ + + + D+GSG
Sbjct: 13 DNLEKAIAYHESLATDGSVR-GFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGA 71
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAP 136
G PGI +I + + LIE K++ +L V + T RG+ ++
Sbjct: 72 GLPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVR--- 125
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++++RA+A L L +S P +
Sbjct: 126 KQVGLVDIVTSRAVAPLGKLATWSLPLV 153
>gi|323357962|ref|YP_004224358.1| S-adenosylmethionine-dependent methyltransferase [Microbacterium
testaceum StLB037]
gi|323274333|dbj|BAJ74478.1| predicted S-adenosylmethionine-dependent methyltransferase
[Microbacterium testaceum StLB037]
Length = 209
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 5/119 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ +S L + D+GSG G PGI+ +I ++ L
Sbjct: 38 GLIGPLEVPRLWTRHILNSAVAAPL--FEGQAADIGSGAGLPGIVLAIARPDVQ---WTL 92
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
IE ++ +L + A E + DV++ARA++ L TLL + P
Sbjct: 93 IEPMERRTVWLTEQAESLGLTNVTVARMRGEEWTGGRSFDVVTARAVSALRTLLPSTAP 151
>gi|288802193|ref|ZP_06407633.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica D18]
gi|288335160|gb|EFC73595.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica D18]
Length = 207
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSI 91
L+ W+ KIN++S +++ + H+ SL + + + + +D G+GGGFPG+ +I
Sbjct: 26 LYHDWNAKINVISRKDIDNLYEHHILHSLAIAKYINFREGTNVLDFGTGGGFPGVPLAI 84
>gi|23309017|ref|NP_602288.2| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum ATCC
13032]
gi|23821575|sp|Q8NL53|RSMG_CORGL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21325869|dbj|BAC00490.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Corynebacterium glutamicum
ATCC 13032]
Length = 223
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 24 ETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
+ LEK + Y L S + + V W RH+ + + + D+GSG
Sbjct: 27 DNLEKAIAYHESLATDGSVR-GFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGA 85
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAP 136
G PGI +I + + LIE K++ +L V + T RG+ ++
Sbjct: 86 GLPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVR--- 139
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++++RA+A L L +S P +
Sbjct: 140 KQVGLVDIVTSRAVAPLGKLATWSLPLV 167
>gi|269115129|ref|YP_003302892.1| methyltransferase gidB [Mycoplasma hominis]
gi|268322754|emb|CAX37489.1| Methyltransferase gidB [Mycoplasma hominis ATCC 23114]
Length = 238
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------ 75
S+E L+KL +Y L + + K NL E + +S+ +F L +I
Sbjct: 19 SKEVLKKLYEYYQLIEQENSKYNLTGFYN-EKLLKEAIIESILIF-LDIEKNICNLTNKS 76
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
+D+GSG GFP + I + + E ++K+ +FL V + + + R +
Sbjct: 77 VLDIGSGAGFPILPYFIYKQDFS---LTIYEPQSKRVNFLNLVKNELKLKNIDIQKIRAE 133
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
++ Q I D ISARA+++L LLE S L
Sbjct: 134 DSNQ-IECFDFISARAVSELKNLLEISHHLL 163
>gi|327395841|dbj|BAK13263.1| methyltransferase GidB [Pantoea ananatis AJ13355]
Length = 160
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RH+ DS+ V H S +ID+G+G G PGI +I + L++S K+ F
Sbjct: 1 MLVRHILDSI-VVAPHLQGSRFIDVGTGPGLPGIPLAIVMPEAH---FTLLDSLGKRVRF 56
Query: 114 LRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
LR V + + R++ P VIS RA A L+ ++ +
Sbjct: 57 LRQVQHELGLTNIEPVQSRVEAFPSEPPFDGVIS-RAFASLEDMVSW 102
>gi|87301282|ref|ZP_01084123.1| putative glucose inhibited division protein B [Synechococcus sp. WH
5701]
gi|87284250|gb|EAQ76203.1| putative glucose inhibited division protein B [Synechococcus sp. WH
5701]
Length = 244
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVF--QLH--PYPSIWIDLGSGGGFPGIITSIQLS 94
W+ ++NL +D+WI V DSL + QL+ P +D+G+GGGFPG+ +I L
Sbjct: 38 WNARLNLTRLVDGDDYWIAQVYDSLWPWRDQLNTPSQPLRCLDVGTGGGFPGLALAIALP 97
Query: 95 SIEGGLVNLIESKNKKASFLRYVV-------------QKTAARGKVFACRIQE 134
+ + L++S +KA ++ + ++ A G+ +CR ++
Sbjct: 98 AA---RLTLVDSVGRKAEAVKAMAASLGLGERVQVRWERAEATGQARSCRGRQ 147
>gi|330837280|ref|YP_004411921.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta
coccoides DSM 17374]
gi|329749183|gb|AEC02539.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta
coccoides DSM 17374]
Length = 227
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSIWI-DLG 79
+LE + W+ LV++ D IRH+ DSL + P S + D+G
Sbjct: 26 QLEKYLSELTLWNPVYRLVNAEG-RDIVIRHLLDSLAAVPILRSLLDESPAGSREVCDVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
SG G PGI +I + + LIE ++A FL + + G+V
Sbjct: 85 SGPGLPGIPLAIAMPDVR---FTLIERMGRRADFLANALAACSLDGRV 129
>gi|294786225|ref|ZP_06751479.1| 16S rRNA methyltransferase GidB [Parascardovia denticolens F0305]
gi|315225758|ref|ZP_07867546.1| glucose inhibited division protein B [Parascardovia denticolens DSM
10105]
gi|294485058|gb|EFG32692.1| 16S rRNA methyltransferase GidB [Parascardovia denticolens F0305]
gi|315119890|gb|EFT83022.1| glucose inhibited division protein B [Parascardovia denticolens DSM
10105]
Length = 327
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-----LHPYPS--------- 73
KL F+ K + L+ V+ W RH+ +S + L PS
Sbjct: 21 KLTRFHAKLEKEGEPRGLIGPRDVDIIWERHILNSAALLPFVRTALDAIPSRLYLGEVDG 80
Query: 74 ----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
I D+GSGGGFPGI+ + L + LIE ++ +L+ VV++
Sbjct: 81 ENAPIVGDIGSGGGFPGIVLAALLPHVR---FFLIEPMERRCEWLQEVVEE 128
>gi|239980793|ref|ZP_04703317.1| glucose-inhibited division protein B [Streptomyces albus J1074]
gi|291452652|ref|ZP_06592042.1| methyltransferase gidB [Streptomyces albus J1074]
gi|291355601|gb|EFE82503.1| methyltransferase gidB [Streptomyces albus J1074]
Length = 235
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 14/127 (11%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ V W RH+ + + + D+GSG G PGI ++ + + L
Sbjct: 40 GLIGPREVPRLWERHLLNCAVLSEAIDEGVSVCDVGSGAGLPGIPLALVRPDLT---ITL 96
Query: 104 IESKNKKASFLRYVVQ------KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+E ++ +FL VV+ T RG R +E + V++ARA+A L+ L
Sbjct: 97 LEPLLRRTTFLTEVVELLGLDHVTVVRG-----RAEEVLGKLPPVHVVTARAVAPLERLA 151
Query: 158 EYSFPWL 164
+ P L
Sbjct: 152 GWGVPLL 158
>gi|216263790|ref|ZP_03435784.1| 16S rRNA methyltransferase GidB [Borrelia afzelii ACA-1]
gi|215979834|gb|EEC20656.1| 16S rRNA methyltransferase GidB [Borrelia afzelii ACA-1]
Length = 208
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 58 HVEDSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I SS + L+E KK++FL+
Sbjct: 55 HVIDSLLGLPTIKEANPSEILDVGSGAGFPGIILAIFDSSRK---YYLLERSKKKSTFLK 111
Query: 116 YV 117
+
Sbjct: 112 MI 113
>gi|160901811|ref|YP_001567392.1| methyltransferase GidB [Petrotoga mobilis SJ95]
gi|189040704|sp|A9BF05|RSMG_PETMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160359455|gb|ABX31069.1| methyltransferase GidB [Petrotoga mobilis SJ95]
Length = 225
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIWIDL 78
S E EK+ + + + + +NL + +T +D + + DSL + +D+
Sbjct: 4 SDEKAEKINKYIEMLINYP--VNLTAYTTKKDAYENLILDSLIPIEAEDTFLNSKNIVDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--AP 136
G+GGG PG++ +I E L++S +KK L+ +++ C E A
Sbjct: 62 GTGGGIPGLVWAIYFPEKE---FYLVDSVSKKIEALKIFIKELKITNVYLFCERAEDFAK 118
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
D + +ALA D LEY P +
Sbjct: 119 THRDYFDFATCKALARSDIALEYLSPLV 146
>gi|294784743|ref|ZP_06750031.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_27]
gi|294486457|gb|EFG33819.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_27]
Length = 232
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+G+G GFPG++ +I E L++S KK FL V + + ++ R +
Sbjct: 71 LIDIGTGAGFPGMMLAI---FNEDKKFILLDSVRKKIDFLELVKNELNLKNVEIINGRAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWL 164
E DV R +++L +LEY P+L
Sbjct: 128 EIIKDRREKYDVGLCRGVSNLSVILEYEIPFL 159
>gi|237752962|ref|ZP_04583442.1| methyltransferase GidB [Helicobacter winghamensis ATCC BAA-430]
gi|229375229|gb|EEO25320.1| methyltransferase GidB [Helicobacter winghamensis ATCC BAA-430]
Length = 187
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWIDLGSGG 82
E LE + + L W+ +L + +D +++E+SL ++ H + + +D+GSG
Sbjct: 9 ELLENYTQMLLSWNAIHSLSGAKDTKDIQ-KNIENSLYPLSKIDLGHKH--LLLDIGSGN 65
Query: 83 GFPGIITSIQL--SSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQE 134
GFP I I L +I L E KKA+FL+ + + R K+ + ++
Sbjct: 66 GFPAIPLHIALRIPTI------LCEPNAKKAAFLQNIKATLKLQNLSIQRKKIESLELKN 119
Query: 135 APQMITTCDVISARALAD 152
P +IT+ + + L +
Sbjct: 120 LPDLITSRATFATKVLLE 137
>gi|119486502|ref|ZP_01620560.1| Glucose inhibited division protein [Lyngbya sp. PCC 8106]
gi|119456404|gb|EAW37535.1| Glucose inhibited division protein [Lyngbya sp. PCC 8106]
Length = 230
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIW--------ID 77
++ + Y L ++ +NL + E FW +H+ DSL + P W ID
Sbjct: 30 QQFQCLYEEILTGNQSLNLTRITQPEAFWEKHLWDSLA--GIAPLLRGEWDFASTVEVID 87
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G GFPG+ +I V L++S KK +FL ++ + +F R ++
Sbjct: 88 IGTGAGFPGLPVAIAFPKSS---VMLLDSVRKKITFLESLIADLEIKNSSLFVGRAEQVN 144
Query: 137 QMI 139
Q +
Sbjct: 145 QQL 147
>gi|111114999|ref|YP_709617.1| glucose inhibited division protein B [Borrelia afzelii PKo]
gi|123047052|sp|Q0SNY7|RSMG_BORAP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110890273|gb|ABH01441.1| glucose inhibited division protein B [Borrelia afzelii PKo]
Length = 208
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 58 HVEDSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I SS + L+E KK++FL+
Sbjct: 55 HVIDSLLGLPTIKEANPSEILDVGSGAGFPGIILAIFDSSRK---YYLLERSKKKSTFLK 111
Query: 116 YV 117
+
Sbjct: 112 MI 113
>gi|145297090|ref|YP_001139911.1| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum R]
gi|189039499|sp|A4QIE3|RSMG_CORGB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|140847010|dbj|BAF56009.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 223
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 24 ETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
+ LEK + Y L S + + V W RH+ + + + D+GSG
Sbjct: 27 DNLEKAIAYHESLATDGSVR-GFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGA 85
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK------TAARGKVFACRIQEAP 136
G PGI +I + + LIE K++ +L V + T RG+ ++
Sbjct: 86 GLPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVIRGRAEEKVVR--- 139
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
+ + D++++RA+A L L +S P +
Sbjct: 140 KQVGLVDIVTSRAVAPLGKLATWSLPLV 167
>gi|119503565|ref|ZP_01625648.1| glucose inhibited division protein B [marine gamma proteobacterium
HTCC2080]
gi|119460627|gb|EAW41719.1| glucose inhibited division protein B [marine gamma proteobacterium
HTCC2080]
Length = 210
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
+KL + L +W++ NL + RH+ DSL + H I +D+G+G G PG
Sbjct: 26 KKLIAYVELINRWNRAYNLTAVRDPMAMVTRHLLDSLAISP-HIPAGITLDVGTGPGLPG 84
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFL 114
I ++ +L++ KK FL
Sbjct: 85 IPLAVAFPDQR---FHLLDGNGKKTRFL 109
>gi|167629163|ref|YP_001679662.1| methyltransferase gidb [Heliobacterium modesticaldum Ice1]
gi|167591903|gb|ABZ83651.1| methyltransferase gidb [Heliobacterium modesticaldum Ice1]
Length = 257
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
P ID+G+G GFPG+ ++ V L++S NK+ FL ++ ++
Sbjct: 89 PVTAIDVGTGAGFPGLPLALIRPQWR---VTLLDSLNKRCRFLSETTERLGLTNVQILHG 145
Query: 131 RIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
R +++ P + ++ +RA+A L LLE P++
Sbjct: 146 RAEDSARNPLLRDKYSIVVSRAVARLPVLLELCLPFV 182
>gi|50955951|ref|YP_063239.1| glucose-inhibited division protein B [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|55976375|sp|Q6ABV7|RSMG_LEIXX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50952433|gb|AAT90134.1| glucose-inhibited division protein B [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 209
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L+ + W RH+ +S V L P + D+GSG G PG++ +I + L
Sbjct: 38 GLIGPLELPRLWSRHILNSAIVAPLL-RPGVVGDVGSGAGLPGLVLAIARPDVS---FVL 93
Query: 104 IESKNKKASFLRYVVQKTAARG----KVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
IE +++ +L ++ A G + R ++A ++ D ++ARA++ LL
Sbjct: 94 IEPMDRRVIWLN---EQVAELGLLNVDIVRARAEDA-KLAKPLDQVTARAVSAFRKLLPL 149
Query: 160 SFPWL 164
+ P L
Sbjct: 150 TAPLL 154
>gi|325474767|gb|EGC77953.1| ribosomal RNA small subunit methyltransferase G [Treponema
denticola F0402]
Length = 249
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 39/175 (22%)
Query: 22 SRETLEKLEYFYFLFLK-WSKKINLVSSSTVEDFWIRHVEDSLRVFQ------------- 67
+ L KL Y LK ++ NLV E+ + HV DSL +
Sbjct: 30 AHNKLSKLLNIYMRELKMFNASFNLVKVKDDEELIVSHVLDSLSAWHFFYNETKNTESNT 89
Query: 68 ---------LHPYPSIWIDLGSGGGFPGIITS---IQLSSIEGGLVNLIESKNKKASFL- 114
L P D G+G G PGI + I L +++ L +LIE K+ +FL
Sbjct: 90 TSKNDNDDLLRKEPFYIADAGTGAGLPGIPLAALFISLGNLDVKL-SLIERMQKRCTFLE 148
Query: 115 --RYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLD-----TLLEYSFP 162
+ V+Q ++ ++APQ D+++ RA LD TLL + P
Sbjct: 149 NIKAVLQ--LNNTEIIESEAEKAPQ--NKFDIVTCRAFRTLDKHILNTLLNLAKP 199
>gi|218437873|ref|YP_002376202.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
gi|218170601|gb|ACK69334.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
Length = 243
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIWIDLGSGGGF 84
K + Y L ++++NL + +FW +H+ DSL L ID+G+G GF
Sbjct: 29 KFQRLYEEILLGNRQLNLTRITESSEFWEKHLWDSLSGIIPLGLRDQELSVIDIGTGAGF 88
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT--- 140
PG+ +I S V L++S KK FL+ ++ K + V R++ Q T
Sbjct: 89 PGLPVAI---SYPNWRVTLLDSVQKKLLFLKSLLPKLEIKNTTVLIGRVEAIAQDKTYRE 145
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T D+ RA+A EY P L
Sbjct: 146 TFDLALIRAVASASVCAEYGLPLL 169
>gi|170783397|ref|YP_001711731.1| 16S rRNA methyltransferase GidB [Clavibacter michiganensis subsp.
sepedonicus]
gi|189039493|sp|B0RDP8|RSMG_CLAMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169157967|emb|CAQ03177.1| cell division methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 211
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+++ L+ W RH+ +S+ V L P + D+G+G G PG++ +I ++
Sbjct: 36 GEELGLIGPLEPPRLWSRHIINSVLVAPLL-NPGVVGDIGTGAGLPGLVLAIARPDVD-- 92
Query: 100 LVNLIESKNKKASFLRYVVQKTAARG----KVFACRIQEAPQMITTCDVISARALADLDT 155
LIE ++ ++L ++ A G +V R ++ I + D ++ARA++
Sbjct: 93 -FVLIEPMERRVAWLE---EQVAHLGLDNVQVRRARAEDVANEI-SLDQVTARAVSAFSK 147
Query: 156 LLEYSFPWL 164
L+ + P +
Sbjct: 148 LIPLTVPLV 156
>gi|317126735|ref|YP_004100847.1| 16S rRNA m(7)G-527 methyltransferase [Intrasporangium calvum DSM
43043]
gi|315590823|gb|ADU50120.1| 16S rRNA m(7)G-527 methyltransferase [Intrasporangium calvum DSM
43043]
Length = 300
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW---IDLGSGGGFPG 86
E F + L+ W RHV + V + P + ID+GSG G PG
Sbjct: 67 EEFVTILADTGISHGLIGPREAPRLWDRHVLNCGLVHHVIPVGTPGQRVIDIGSGAGLPG 126
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ +I +E V+L+E ++ +L V + V E+ + ++
Sbjct: 127 LVLAIARPDLE---VHLVEPLARRTGWLSGVTARLELENVVIHTARAESMWDRISAPWVT 183
Query: 147 ARALADLDTLLEYSFPWLYQK 167
ARA++ + L ++ P L +
Sbjct: 184 ARAVSGILQLAHWTLPLLEPR 204
>gi|171741739|ref|ZP_02917546.1| hypothetical protein BIFDEN_00830 [Bifidobacterium dentium ATCC
27678]
gi|171277353|gb|EDT45014.1| hypothetical protein BIFDEN_00830 [Bifidobacterium dentium ATCC
27678]
Length = 249
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------ID 77
+ L KL F+ + + L+ V W RH+ +S + ++ D
Sbjct: 20 DALVKLRIFHDKLAQEGEPRGLIGPRDVGIIWERHILNSAAIVPFVREATVRRQFKTVAD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+GSGGGFPGI+ + LS LV +E +
Sbjct: 80 IGSGGGFPGIVAAACLSDHRFTLVEPMERR 109
>gi|25029499|ref|NP_739553.1| glucose-inhibited division protein B [Corynebacterium efficiens
YS-314]
gi|259508319|ref|ZP_05751219.1| 16S rRNA methyltransferase GidB [Corynebacterium efficiens YS-314]
gi|23494788|dbj|BAC19753.1| putative glucose inhibited division protein B [Corynebacterium
efficiens YS-314]
gi|259164137|gb|EEW48691.1| 16S rRNA methyltransferase GidB [Corynebacterium efficiens YS-314]
Length = 209
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ + W RH+ + + + D+GSG G PGI +I ++ + L
Sbjct: 33 GFIGPREIPRLWDRHILNCGVIGEAMEEGISVADVGSGAGLPGIPLAIARPDLK---IIL 89
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYS 160
IE K++ +L V+++ V R +E + + DV+++RA+A L L +S
Sbjct: 90 IEPLLKRSVYLGEVIEQLGLDNVSVIRGRAEEKAVRKQVGHVDVVTSRAVAPLGRLASWS 149
Query: 161 FP 162
P
Sbjct: 150 LP 151
>gi|323167067|gb|EFZ52797.1| methyltransferase gidB domain protein [Shigella sonnei 53G]
Length = 89
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIE 97
+K NL S + +RH+ DS+ V PY +ID+G+G G PGI SI
Sbjct: 1 NKAYNLTSVRDPNEMLVRHILDSIVVA---PYLQGERFIDVGTGPGLPGIPLSIVRPEAH 57
Query: 98 GGLVNLIESKNKKASFLRYV 117
L++S K+ FLR V
Sbjct: 58 ---FTLLDSLGKRVRFLRQV 74
>gi|88854494|ref|ZP_01129161.1| glucose-inhibited division protein B [marine actinobacterium
PHSC20C1]
gi|88816302|gb|EAR26157.1| glucose-inhibited division protein B [marine actinobacterium
PHSC20C1]
Length = 211
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+ +++ L+ V W RH+ + + V L P + D+GSG G PG++ +I +E
Sbjct: 34 RRGEELGLIGPLEVSRLWTRHIVNCVLVAPLL-KPGLVGDIGSGAGLPGLVLAIARPDVE 92
Query: 98 GGLVNLIESK 107
L+ +E +
Sbjct: 93 FVLIEPMERR 102
>gi|219684023|ref|YP_002470406.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis AD011]
gi|219621673|gb|ACL29830.1| methyltransferase GidB [Bifidobacterium animalis subsp. lactis
AD011]
Length = 243
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 32/170 (18%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSIWI 76
+ L K+ FY + L+ V+ W RH+ +S V + S+
Sbjct: 18 DALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVPFIRQATSGKQFRSV-A 76
Query: 77 DLGSGGGFPGIITSIQLSS-----IEG---------------GL--VNLIESKNKKA-SF 113
D+GSGGGFPG++ + L IE GL V ++ +++++A +
Sbjct: 77 DIGSGGGFPGLVAAAMLPDHTFTLIEPMERRCEWLSECVETMGLENVQIVRARSEEAIAA 136
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTC-DVISARALADLDTLLEYSFP 162
L K++ RG E Q I V++ RA+A + L ++ P
Sbjct: 137 LEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMTKLTGWTLP 186
>gi|83649684|ref|YP_438119.1| methyltransferase GidB [Hahella chejuensis KCTC 2396]
gi|123529921|sp|Q2S6N0|RSMG_HAHCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83637727|gb|ABC33694.1| methyltransferase GidB [Hahella chejuensis KCTC 2396]
Length = 217
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
K+ + L KW+K NL + RH+ DSL PY ++D+G+G G P
Sbjct: 29 KILRYLELLHKWNKAYNLTAVRDPVLHVSRHILDSLAAL---PYLKGVQFLDVGAGAGLP 85
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFL 114
GI SI L L++S KK F+
Sbjct: 86 GIPLSIALPESH---WTLLDSNGKKTRFM 111
>gi|241197033|ref|YP_002970588.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|240251587|gb|ACS48526.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis DSM 10140]
Length = 247
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 32/170 (18%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSIWI 76
+ L K+ FY + L+ V+ W RH+ +S V + S+
Sbjct: 22 DALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVPFIRQATSGKQFRSV-A 80
Query: 77 DLGSGGGFPGIITSIQLSS-----IEG---------------GL--VNLIESKNKKA-SF 113
D+GSGGGFPG++ + L IE GL V ++ +++++A +
Sbjct: 81 DIGSGGGFPGLVAAAMLPDHTFTLIEPMERRCEWLSECVETMGLENVQIVRARSEEAIAA 140
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTC-DVISARALADLDTLLEYSFP 162
L K++ RG E Q I V++ RA+A + L ++ P
Sbjct: 141 LEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMTKLTGWTLP 190
>gi|183602662|ref|ZP_02964026.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis HN019]
gi|241191628|ref|YP_002969022.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|183218080|gb|EDT88727.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis HN019]
gi|240250020|gb|ACS46960.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|289177763|gb|ADC85009.1| GidB [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794620|gb|ADG34155.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis V9]
Length = 247
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 32/170 (18%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSIWI 76
+ L K+ FY + L+ V+ W RH+ +S V + S+
Sbjct: 22 DALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVPFIRQATSGKQFRSV-A 80
Query: 77 DLGSGGGFPGIITSIQLSS-----IEG---------------GL--VNLIESKNKKA-SF 113
D+GSGGGFPG++ + L IE GL V ++ +++++A +
Sbjct: 81 DIGSGGGFPGLVAAAMLPDHTFTLIEPMERRCEWLSECVETMGLENVQIVRARSEEAIAA 140
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTC-DVISARALADLDTLLEYSFP 162
L K++ RG E Q I V++ RA+A + L ++ P
Sbjct: 141 LEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMTKLTGWTLP 190
>gi|288939800|ref|YP_003442040.1| methyltransferase GidB [Allochromatium vinosum DSM 180]
gi|288895172|gb|ADC61008.1| methyltransferase GidB [Allochromatium vinosum DSM 180]
Length = 231
Score = 38.1 bits (87), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +L L +W++ NL + + +H+ DSL + + +D+G+G G
Sbjct: 46 EQQARLVALLGLLTRWNQAYNLTAVRDPLEMVAKHLLDSLAIAPFL-FGETVLDVGTGAG 104
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
PG+ +I + L++S NKK F+R V
Sbjct: 105 LPGLPLAILVPERR---FWLLDSNNKKVRFVRQAV 136
>gi|29427800|sp|Q8FSV1|RSMG_COREF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 232
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ + W RH+ + + + D+GSG G PGI +I ++ + L
Sbjct: 56 GFIGPREIPRLWDRHILNCGVIGEAMEEGISVADVGSGAGLPGIPLAIARPDLK---IIL 112
Query: 104 IESKNKKASFLRYVVQK------TAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
IE K++ +L V+++ + RG+ ++ + + DV+++RA+A L L
Sbjct: 113 IEPLLKRSVYLGEVIEQLGLDNVSVIRGRAEEKAVR---KQVGHVDVVTSRAVAPLGRLA 169
Query: 158 EYSFP 162
+S P
Sbjct: 170 SWSLP 174
>gi|134103812|ref|YP_001109473.1| putative glucose inhibited division protein B [Saccharopolyspora
erythraea NRRL 2338]
gi|133916435|emb|CAM06548.1| putative glucose inhibited division protein B [Saccharopolyspora
erythraea NRRL 2338]
Length = 155
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI SI +E + L+E ++ ++L+ V+ + +V R +E P + +
Sbjct: 1 MPGIPLSIARPDLE---LTLLEPMARRVAWLQEVITELGLNAEVMRGRAEEGPVRERLAD 57
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A + L ++ P L +
Sbjct: 58 QDVVTARAVAPMARLAKWCLPLLRPE 83
>gi|15594522|ref|NP_212311.1| glucose inhibited division protein B (gidB) [Borrelia burgdorferi
B31]
gi|223889270|ref|ZP_03623858.1| methyltransferase GidB [Borrelia burgdorferi 64b]
gi|3915712|sp|P53363|RSMG_BORBU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|2688060|gb|AAC66558.1| glucose inhibited division protein B (gidB) [Borrelia burgdorferi
B31]
gi|223885303|gb|EEF56405.1| methyltransferase GidB [Borrelia burgdorferi 64b]
Length = 208
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I SS + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDSSRK---YYLLERSKKKSTFLKMI 113
>gi|239906964|ref|YP_002953705.1| methyltransferase GidB [Desulfovibrio magneticus RS-1]
gi|239796830|dbj|BAH75819.1| methyltransferase GidB [Desulfovibrio magneticus RS-1]
Length = 219
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 24/125 (19%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSST--------VEDFWIRHVEDSLRVFQLHPYPS-- 73
E EKL + L +W ++NLV S + D W HV D L P
Sbjct: 15 EQAEKLAGYLTLLTRWRGRVNLVGPSDWREILETLIADSW--HVADFLSGPGAAFLPPAG 72
Query: 74 ---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT------AAR 124
+ +D G+G G PG+ + G +L+E++ K+A FL + AA
Sbjct: 73 ESVVSLDFGAGAGLPGVPLRAFWNR---GDYHLLEARQKRAVFLGECAARLGFAGLFAAE 129
Query: 125 GKVFA 129
G+V A
Sbjct: 130 GRVEA 134
>gi|224012793|ref|XP_002295049.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969488|gb|EED87829.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 402
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 13/84 (15%)
Query: 37 LKWSKKINLVS--SSTVEDFWIRHVEDSLRVFQL-----------HPYPSIWIDLGSGGG 83
L+W++++NLVS T + RHV S+ + L + +D+G+GGG
Sbjct: 136 LQWNQRLNLVSRKDCTASVVYHRHVLPSVGLLPLIVPLLTQQQRDNAQQLKIVDVGTGGG 195
Query: 84 FPGIITSIQLSSIEGGLVNLIESK 107
FPG+ + L +++ LV+ I+ K
Sbjct: 196 FPGLPLATLLPNVQFTLVDSIQKK 219
>gi|154486338|ref|ZP_02027745.1| hypothetical protein BIFADO_00147 [Bifidobacterium adolescentis
L2-32]
gi|154084201|gb|EDN83246.1| hypothetical protein BIFADO_00147 [Bifidobacterium adolescentis
L2-32]
Length = 247
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D N L + +L V + L KL+ F+ + L+ V W RH+ +S
Sbjct: 6 DVNDELDGSPILE--EVLGDALGKLKVFHVKLAAEGEPRGLIGPRDVGIIWERHILNSAA 63
Query: 65 VFQL-------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ + ++ D+GSGGGFPGI+ + L + LV +E +
Sbjct: 64 IVPFIREATAKRQFKTV-ADIGSGGGFPGIVAAACLPDHQFTLVEPMERR 112
>gi|119026644|ref|YP_910489.1| 16S rRNA methyltransferase GidB [Bifidobacterium adolescentis ATCC
15703]
gi|189039483|sp|A1A3X4|RSMG_BIFAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118766228|dbj|BAF40407.1| methyltransferase gidB [Bifidobacterium adolescentis ATCC 15703]
Length = 249
Score = 38.1 bits (87), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D N L + +L V + L KL+ F+ + L+ V W RH+ +S
Sbjct: 8 DVNDELDGSPILE--EVLGDALGKLKVFHVKLAAEGEPRGLIGPRDVGIIWERHILNSAA 65
Query: 65 VFQL-------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ + ++ D+GSGGGFPGI+ + L + LV +E +
Sbjct: 66 IVPFIREATAKRQFKTV-ADIGSGGGFPGIVAAACLPDHQFTLVEPMERR 114
>gi|194291176|ref|YP_002007083.1| 16S rRNA methyltransferase gidb [Cupriavidus taiwanensis LMG 19424]
gi|193225011|emb|CAQ71022.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Cupriavidus taiwanensis LMG 19424]
Length = 242
Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----------RVFQLH-PYPSI 74
++ L + L KW+ NL + ++ H+ DSL R ++ P
Sbjct: 36 IDTLFAYLALLRKWNGVYNLTAIRHPDEMLTHHMLDSLAAVPALAQAARAVEVAAPARGR 95
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+D+GSGGG PG+ +I + +V++++ KK +FL
Sbjct: 96 VLDVGSGGGMPGLPLAIACPDVSVLMVDIVQ---KKTAFL 132
>gi|224534193|ref|ZP_03674771.1| methyltransferase GidB [Borrelia spielmanii A14S]
gi|224514295|gb|EEF84611.1| methyltransferase GidB [Borrelia spielmanii A14S]
Length = 208
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEILDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|224417923|ref|ZP_03655929.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|253827262|ref|ZP_04870147.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|313141464|ref|ZP_07803657.1| glucose inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|253510668|gb|EES89327.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|313130495|gb|EFR48112.1| glucose inhibited division protein B [Helicobacter canadensis MIT
98-5491]
Length = 190
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWIDLGSGG 82
+ LE + L L+W+ +L + ++ + ++++DSL + + + D+GSG
Sbjct: 11 QALETYAKLLLEWNGIHSLSGARDLQSVY-KNIQDSLYPLEFLGEVLRNKTKLFDVGSGN 69
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GFP + I L G V L E KKA+FL+ + + + + + E ++
Sbjct: 70 GFPAVALGIAL----GIEVVLCEPNAKKAAFLQNLKSQLGLKNFMILRQRVEEVKLDKKP 125
Query: 143 DVISARALADLDTLLE 158
D+I++RA ++ L+
Sbjct: 126 DLITSRATFSVEDFLK 141
>gi|283457084|ref|YP_003361648.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium dentium Bd1]
gi|283103718|gb|ADB10824.1| GidB Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium dentium Bd1]
Length = 227
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------IDLGSG 81
KL F+ + + L+ V W RH+ +S + ++ D+GSG
Sbjct: 2 KLRIFHDKLAQEGEPRGLIGPRDVGIIWERHILNSAAIVPFVREATVRRQFKTVADIGSG 61
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESK 107
GGFPGI+ + LS LV +E +
Sbjct: 62 GGFPGIVAAACLSDHRFTLVEPMERR 87
>gi|224531849|ref|ZP_03672481.1| methyltransferase GidB [Borrelia valaisiana VS116]
gi|224511314|gb|EEF81720.1| methyltransferase GidB [Borrelia valaisiana VS116]
Length = 208
Score = 37.7 bits (86), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR--HVEDSLRVFQL--HPYPSIWIDLGSG 81
L+K+ + L + + NL+S+S I HV DSL PS +D+GSG
Sbjct: 21 LQKINLYIKRILLLNTRFNLISNSNSNFNAILNLHVIDSLLGLSTIKEINPSEVLDVGSG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
GFPGI+ +I +S + L+E KK++FL+ +
Sbjct: 81 AGFPGIVLAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|212715143|ref|ZP_03323271.1| hypothetical protein BIFCAT_00029 [Bifidobacterium catenulatum DSM
16992]
gi|212661824|gb|EEB22399.1| hypothetical protein BIFCAT_00029 [Bifidobacterium catenulatum DSM
16992]
Length = 267
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSIWI 76
+ L K+ F+ ++ + L+ V W RH+ +S + + ++
Sbjct: 23 DALGKMRVFHAKLVEEGEPRGLIGPRDVAIIWERHILNSAAIVPFVRESTAKKQFKTV-A 81
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
D+GSGGGFPGI+ + L + LV +E +
Sbjct: 82 DIGSGGGFPGIVAAACLPDHQFTLVEPMERR 112
>gi|306824001|ref|ZP_07457375.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium ATCC
27679]
gi|309801963|ref|ZP_07696077.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium
JCVIHMP022]
gi|304552999|gb|EFM40912.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium ATCC
27679]
gi|308221411|gb|EFO77709.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium
JCVIHMP022]
Length = 249
Score = 37.7 bits (86), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW------ID 77
+ L KL F+ + + L+ V W RH+ +S + ++ D
Sbjct: 20 DALVKLRIFHDKLAQEGEPRGLIGPRDVSIIWERHILNSAAIVPFVREATVRRQFKTVAD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+GSGGGFPGI+ + L LV +E +
Sbjct: 80 IGSGGGFPGIVAAACLPDHRFTLVEPMERR 109
>gi|225552022|ref|ZP_03772962.1| methyltransferase GidB [Borrelia sp. SV1]
gi|225371020|gb|EEH00450.1| methyltransferase GidB [Borrelia sp. SV1]
Length = 208
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|224534081|ref|ZP_03674664.1| methyltransferase GidB [Borrelia burgdorferi CA-11.2a]
gi|224512780|gb|EEF83148.1| methyltransferase GidB [Borrelia burgdorferi CA-11.2a]
Length = 208
Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|315638028|ref|ZP_07893213.1| glucose inhibited division protein B [Campylobacter upsaliensis
JV21]
gi|315481876|gb|EFU72495.1| glucose inhibited division protein B [Campylobacter upsaliensis
JV21]
Length = 186
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGG 83
L+++E + L K+++ NL +++ +++DS+ + D+GSG G
Sbjct: 13 LQRVEIYKNLLKKFNQIHNLTQLKNIDE----NIQDSIEILNFIDLTKAQNIADIGSGAG 68
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
FP I S L S L E KK++FLR V + + + ++Q
Sbjct: 69 FPAIFLSFLLDS----RFYLFEPNAKKSAFLRSVKIECELKNLHIIKEKVQNHKAEFKA- 123
Query: 143 DVISARALADLDTLLE 158
D I++RAL L++
Sbjct: 124 DFITSRALMKAKDLIQ 139
>gi|195941908|ref|ZP_03087290.1| glucose inhibited division protein B (gidB) [Borrelia burgdorferi
80a]
Length = 208
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|218249711|ref|YP_002374705.1| 16S rRNA methyltransferase GidB [Borrelia burgdorferi ZS7]
gi|221217526|ref|ZP_03588996.1| methyltransferase GidB [Borrelia burgdorferi 72a]
gi|225549788|ref|ZP_03770752.1| methyltransferase GidB [Borrelia burgdorferi 118a]
gi|226321495|ref|ZP_03797021.1| methyltransferase GidB [Borrelia burgdorferi Bol26]
gi|226725353|sp|B7J1B0|RSMG_BORBZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218164899|gb|ACK74960.1| 16S rRNA methyltransferase GidB [Borrelia burgdorferi ZS7]
gi|221192589|gb|EEE18806.1| methyltransferase GidB [Borrelia burgdorferi 72a]
gi|225369596|gb|EEG99045.1| methyltransferase GidB [Borrelia burgdorferi 118a]
gi|226232684|gb|EEH31437.1| methyltransferase GidB [Borrelia burgdorferi Bol26]
gi|312149521|gb|ADQ29592.1| methyltransferase GidB [Borrelia burgdorferi N40]
Length = 208
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|309811325|ref|ZP_07705112.1| 16S rRNA methyltransferase GidB [Dermacoccus sp. Ellin185]
gi|308434632|gb|EFP58477.1| 16S rRNA methyltransferase GidB [Dermacoccus sp. Ellin185]
Length = 255
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L+ V W RHV L +HP + D+G+G G PG++ +I +
Sbjct: 54 GLMGPREVPRMWERHV---LNCAVVHPGIARGAHVADIGAGAGLPGLVLAIARPDL---T 107
Query: 101 VNLIESKNKKASFLRYVVQK-TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ L+E ++ ++L VV++ +V R E T DV+++RA+A + L +
Sbjct: 108 MTLVEPLLRRTTWLADVVEELDLPNVEVVRARADEL-WGQRTFDVVTSRAVARIGELARW 166
Query: 160 SFP 162
S P
Sbjct: 167 SLP 169
>gi|226320916|ref|ZP_03796467.1| methyltransferase GidB [Borrelia burgdorferi 29805]
gi|226233688|gb|EEH32418.1| methyltransferase GidB [Borrelia burgdorferi 29805]
Length = 208
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDASRK---YYLLERSKKKSTFLKMI 113
>gi|225548551|ref|ZP_03769599.1| methyltransferase GidB [Borrelia burgdorferi 94a]
gi|225370814|gb|EEH00249.1| methyltransferase GidB [Borrelia burgdorferi 94a]
Length = 208
Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|312148248|gb|ADQ30907.1| methyltransferase GidB [Borrelia burgdorferi JD1]
Length = 208
Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|219685817|ref|ZP_03540626.1| methyltransferase GidB [Borrelia garinii Far04]
gi|219672650|gb|EED29680.1| methyltransferase GidB [Borrelia garinii Far04]
Length = 208
Score = 37.4 bits (85), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGI+ +I +S + L+E KK++FL+ +
Sbjct: 71 PSEILDVGSGAGFPGIVLAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|219684672|ref|ZP_03539615.1| methyltransferase GidB [Borrelia garinii PBr]
gi|219672034|gb|EED29088.1| methyltransferase GidB [Borrelia garinii PBr]
Length = 208
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGI+ +I +S + L+E KK++FL+ +
Sbjct: 71 PSEILDVGSGAGFPGIVLAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|216264819|ref|ZP_03436811.1| 16S rRNA methyltransferase GidB [Borrelia burgdorferi 156a]
gi|224532871|ref|ZP_03673486.1| methyltransferase GidB [Borrelia burgdorferi WI91-23]
gi|215981292|gb|EEC22099.1| 16S rRNA methyltransferase GidB [Borrelia burgdorferi 156a]
gi|224512260|gb|EEF82646.1| methyltransferase GidB [Borrelia burgdorferi WI91-23]
Length = 208
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGII +I +S + L+E KK++FL+ +
Sbjct: 71 PSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|313895121|ref|ZP_07828678.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312976016|gb|EFR41474.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 120
Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLGSG 81
LE+ + L L W++++NL + + ED ++H+ DSL + L ID+G+G
Sbjct: 25 LEQCVRYNELLLTWNERMNLTALTAPEDVAVKHIVDSLSAYDAPLFARAKSLIDVGTG 82
>gi|154250443|ref|YP_001411268.1| methyltransferase GidB [Fervidobacterium nodosum Rt17-B1]
gi|189039388|sp|A7HNX8|RSMG_FERNB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154154379|gb|ABS61611.1| methyltransferase GidB [Fervidobacterium nodosum Rt17-B1]
Length = 213
Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
++D+G+GGG PG+ S++ + GL L++S KK F++ ++ + + R +
Sbjct: 51 FLDIGTGGGVPGVFLSVEFD--KKGL--LVDSICKKVHFIQQTCKELGIKKVETLCARAE 106
Query: 134 E---APQMITTCDVISARALADLDTLLEYSFPWL 164
E D +RA++ + T+LE + P++
Sbjct: 107 ELKGKGDFFEKFDSAVSRAVSKIATVLELTAPYV 140
>gi|158319051|ref|YP_001511559.1| 16S rRNA methyltransferase GidB [Frankia sp. EAN1pec]
gi|158114456|gb|ABW16653.1| methyltransferase GidB [Frankia sp. EAN1pec]
Length = 306
Score = 37.0 bits (84), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW----------IDLGSGGGFPGIITSIQL 93
L+ W RH+ +S + + P S +D+GSG G PGI ++
Sbjct: 75 GLIGPRETGRLWERHLLNSAVLAEAVPTRSASPGSDEAALEVVDVGSGAGLPGIPLALAR 134
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-----TCDVISAR 148
+ V L+E ++ FL V + G+V R + AP + T DV AR
Sbjct: 135 PDLR---VTLLEPMERRCRFLAEAVAELGLAGQVEVVRGR-APDVAELPPHRTFDVTVAR 190
Query: 149 ALADLDTL 156
A+A L L
Sbjct: 191 AVAPLGRL 198
>gi|225352373|ref|ZP_03743396.1| hypothetical protein BIFPSEUDO_03990 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156880|gb|EEG70249.1| hypothetical protein BIFPSEUDO_03990 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 267
Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------IWID 77
+ L KL F+ + + L+ V W RH+ +S + + D
Sbjct: 23 DALGKLRVFHAKLAEEGEPRGLIGPRDVGIIWERHILNSAAIVPFVKEATAKKQFKTVAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+GSGGGFPGI+ + L LV +E +
Sbjct: 83 IGSGGGFPGIVAAACLPDHRFTLVEPMERR 112
>gi|304372919|ref|YP_003856128.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyorhinis HUB-1]
gi|304309110|gb|ADM21590.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyorhinis HUB-1]
Length = 204
Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIWID 77
+ + +LE F L + +K +NL + T + W + +S+ + L +D
Sbjct: 14 NEQIFSQLEKFVSLIEQKNKVMNL-TGFTQDQLWKEGIYESIITLKQSIDLKNKKIALLD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFP I I S I+ LV ++E K+ FL+ V Q+ F A
Sbjct: 73 VGAGAGFPSIPFFIINSDIK--LV-IVEKLKKRCDFLQLVKQELNLD---FEIINDLASN 126
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ D I+ARA+ +LD L + +
Sbjct: 127 LQAKFDYITARAVGNLDFLFKIT 149
>gi|51598438|ref|YP_072626.1| glucose inhibited division protein B [Borrelia garinii PBi]
gi|81610175|sp|Q662I7|RSMG_BORGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51573009|gb|AAU07034.1| glucose inhibited division protein B [Borrelia garinii PBi]
Length = 208
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
PS +D+GSG GFPGI+ +I +S + L+E KK++FL+ +
Sbjct: 71 PSEILDVGSGSGFPGIVLAIFDTSRK---YYLLERSKKKSTFLKMI 113
>gi|113869583|ref|YP_728072.1| 16S rRNA methyltransferase GidB [Ralstonia eutropha H16]
gi|123032570|sp|Q0K5L7|RSMG_RALEH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113528359|emb|CAJ94704.1| S-Adenosylmethionine-dependent methyltransferase involved in
bacterial cell division [Ralstonia eutropha H16]
Length = 233
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-----------PYPSI 74
++ L + L KW+ NL + ++ H+ DSL P
Sbjct: 27 IDTLFAYLALLRKWNGVYNLTAIRHPDEMLTHHMLDSLAAVPALAEAARAAEVGTPARGR 86
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+D+GSGGG PG+ +I + +V++++ KK +FL
Sbjct: 87 VLDVGSGGGMPGLPLAIACPDVSVLMVDIVQ---KKTAFL 123
>gi|120556789|ref|YP_961140.1| methyltransferase GidB [Marinobacter aquaeolei VT8]
gi|166224597|sp|A1U7I4|RSMG_MARAV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120326638|gb|ABM20953.1| 16S rRNA m(7)G-527 methyltransferase [Marinobacter aquaeolei VT8]
Length = 214
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSS 95
KW+K NL + R + DSL + P+ + +D+G+GGG PGI +I +
Sbjct: 38 KWNKAYNLTAVRDERVMVSRQLLDSLSIL---PWVTTDHLLDVGAGGGLPGIPLAIVVPE 94
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
L++S KK FL V + +V R ++ Q IS+RA L+
Sbjct: 95 KR---FTLLDSNGKKTRFLNQCVLELGLDNVEVIHGRAEDC-QPDQPFTQISSRAFTALE 150
Query: 155 TLLEY 159
L+ +
Sbjct: 151 NLVTW 155
>gi|298530547|ref|ZP_07017949.1| methyltransferase GidB [Desulfonatronospira thiodismutans ASO3-1]
gi|298509921|gb|EFI33825.1| methyltransferase GidB [Desulfonatronospira thiodismutans ASO3-1]
Length = 212
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-------RVFQLHPY 71
+ ++ + ++ L+ + KW++ +NLV S + V DSL R+
Sbjct: 15 FELNPQQVQGLQAYLSTLEKWNRSVNLVGPSHWREILHSLVVDSLYLSGFLSRIAHQEDI 74
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
S +DLG+G G+ + G L+ES+ K+ +F+R + + V
Sbjct: 75 RS--LDLGAGA---GLPGLPLRLLWDKGSYYLVESRFKRCAFMRQAISAMGIQNTYVING 129
Query: 131 RIQEAPQMITTCDVISARALADLDTLL 157
R+++ P+ I D+I +RA LL
Sbjct: 130 RVEDLPRDILPADLIVSRAFMPWKKLL 156
>gi|31544848|ref|NP_853426.1| ribosomal RNA small subunit methyltransferase G [Mycoplasma
gallisepticum str. R(low)]
gi|20177907|sp|Q9KX67|RSMG_MYCGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|7109685|gb|AAF36756.1| glucose inhibited division protein B [Mycoplasma gallisepticum]
gi|31541694|gb|AAP56994.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str.
R(low)]
gi|284930923|gb|ADC30862.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str.
R(high)]
Length = 242
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
ID+G+G G PG+I I + V L++S KK +F+ V++K G VFA
Sbjct: 76 IDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNFTG-VFAI 126
>gi|115374110|ref|ZP_01461398.1| methyltransferase GidB [Stigmatella aurantiaca DW4/3-1]
gi|115368886|gb|EAU67833.1| methyltransferase GidB [Stigmatella aurantiaca DW4/3-1]
Length = 149
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA---ARGKVFACRI 132
+DLG+G GFPG+ + ++ V L+++ KK FL+ + ARG R
Sbjct: 8 LDLGAGAGFPGLPLKLARPALA---VTLVDAVGKKVGFLKAAIAALGLKEARG--LHLRA 62
Query: 133 QEAPQM--ITTCDVISARALADL 153
+ P+ I +++ ARA DL
Sbjct: 63 EGDPEREGIPRAELLIARAFMDL 85
>gi|28212474|gb|AAO37613.1| glucose inhibited division protein B [Mycoplasma gallisepticum]
Length = 242
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
ID+G+G G PG+I I + V L++S KK +F+ V++K G VFA
Sbjct: 76 IDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNFTG-VFAI 126
>gi|284931679|gb|ADC31617.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str. F]
Length = 242
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
ID+G+G G PG+I I + V L++S KK +F+ V++K G VFA
Sbjct: 76 IDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNFTG-VFAI 126
>gi|307721449|ref|YP_003892589.1| mechanosensitive ion channel protein MscS [Sulfurimonas
autotrophica DSM 16294]
gi|306979542|gb|ADN09577.1| MscS Mechanosensitive ion channel [Sulfurimonas autotrophica DSM
16294]
Length = 614
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKL----EYFYFLFLKWSKKINLVSSSTVEDFWIR 57
K+ D+ L+ Y +N N+S+E +E L EY Y +++N + S+ + ++I
Sbjct: 27 KFIDTQ--LQLVYQMNDANLSQEQIEDLVQKQEYLY------DQELNKIISN--KQYYIE 76
Query: 58 HVED-SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+V+D S +F L SI + +G G+ I +QL S I KN S
Sbjct: 77 NVQDYSTEIFSLKKIISI--NKRAGNGYAVIRDEVQLKSYAIVKNQNILIKNVLLSLDVP 134
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLE 158
+ + ++ + QEA ITT D AL D ++L+
Sbjct: 135 TINDFEEKLNIYTAQNQEALSKITTKDYKDILALQDDSSILK 176
>gi|145351446|ref|XP_001420088.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580321|gb|ABO98381.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI--------DLGSGGGFPGIITSIQLSSI 96
L +++ E+ H D+L + ++ S I D+GSG G PGI +I +
Sbjct: 2 LTGATSAEEVLESHASDALALLKVFDDASETIGSDATRVLDVGSGAGLPGIPLAI---AR 58
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMITTCDVISARALAD 152
G L+++ K+ +FL ++ V R ++ + + DV++ARA+A+
Sbjct: 59 PGWRFTLLDTLRKRTNFLEATTREIGLTNVDVVWGRAEDLGRDEKWRESFDVVTARAVAE 118
Query: 153 LDTLLEYSFP 162
L L E+ P
Sbjct: 119 LRVLAEFCVP 128
>gi|326804663|ref|YP_004327534.1| Gp15 proximal tail sheath stabilization [Salmonella phage Vi01]
gi|301795313|emb|CBW38031.1| Gp15 proximal tail sheath stabilization [Salmonella phage Vi01]
Length = 232
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 45 LVSSSTVEDFWIRHVEDSLRV-----FQLHPY---PSIWIDLGSGGGFPGIITSI 91
+++S T+ D W +S + FQLH + W+D GSGGG P +I I
Sbjct: 147 MLTSHTISDNWEGDAAESPHIDCTFNFQLHGHIYGEDYWVDDGSGGGDPNVIKEI 201
>gi|153806708|ref|ZP_01959376.1| hypothetical protein BACCAC_00979 [Bacteroides caccae ATCC 43185]
gi|149131385|gb|EDM22591.1| hypothetical protein BACCAC_00979 [Bacteroides caccae ATCC 43185]
Length = 139
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQE 134
+DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 1 MDLGTGGGFPGIPLAILFPETK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEE 57
Query: 135 APQMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L L++
Sbjct: 58 EKQLF---DFVVSRAVMPLADLIK 78
>gi|330723493|gb|AEC45863.1| 16S rRNA methyltransferase GidB [Mycoplasma hyorhinis MCLD]
Length = 204
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWID 77
+ + +LE F L + +K +NL + T + W + +S+ + Y +D
Sbjct: 14 NEQIFSQLEKFVSLIEQKNKVMNL-TGFTQDQLWKEGIYESIITLKQSIYLKNKKIALLD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFP I I S I+ + ++E K+ FL+ V Q+ F A
Sbjct: 73 VGAGAGFPSIPFFIINSDIK---LVIVEKLKKRCDFLQLVKQELNLD---FEIINDLASN 126
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ D I+AR + +LD L + +
Sbjct: 127 LQAKFDYITARVVGNLDFLFKIT 149
>gi|148377452|ref|YP_001256328.1| methyltransferase GidB (glucose inhibiteddivision protein B)
[Mycoplasma agalactiae PG2]
gi|148291498|emb|CAL58884.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma agalactiae PG2]
Length = 231
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHP 70
+YLLN Y+ L K + + + +K +N+ +++ + + + S+ VF+ +
Sbjct: 7 DYLLNKYSKQIPLLYK---YAQMIYEQNKVMNICGFDNIDEIFNQGILGSILVFENAISE 63
Query: 71 YPSIW-----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Y + +D+G+G GFP + I L + E LV +IES K+ +FL + +
Sbjct: 64 YNFDFKGKKILDIGAGAGFPSVPLLIALDN-EFELV-IIESIAKRCAFLETIKAEFKLNL 121
Query: 126 KVFACRIQEAPQMITTCDVISARALADL 153
+ R + + D + ARAL +
Sbjct: 122 TIINDRAENVNSYNSYFDYVCARALGSV 149
>gi|298717518|ref|YP_003730160.1| RND efflux system inner membrane transporter component [Pantoea
vagans C9-1]
gi|298361707|gb|ADI78488.1| Putative RND efflux system, inner membrane transporter component
[Pantoea vagans C9-1]
Length = 1053
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 18/97 (18%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---------RVFQLHPYPSIW 75
T++K + + L L K N SSS V D+ + ++EDSL +VF IW
Sbjct: 130 TVQKAQSDFLLILALYDKTNKSSSSDVADYMVSNMEDSLARVPGVGSVQVFGAEYAMRIW 189
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+D P +TS L + + +ES+N + S
Sbjct: 190 LD-------PARLTSFSL--MPSDVTTALESQNTQVS 217
>gi|291320116|ref|YP_003515374.1| methyltransferase GidB [Mycoplasma agalactiae]
gi|290752445|emb|CBH40416.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma agalactiae]
Length = 230
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-- 67
+ YLLN Y+ L K + + + +K +N+ ++++ + + + S+ VF+
Sbjct: 3 INKEYLLNKYSKQIPLLYK---YAQMIYEQNKVMNICGFDSIDEIFNQGILGSILVFENA 59
Query: 68 LHPYPSIW-----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ Y + +D+G+G GFP + I L + E LV +IES K+ +FL + +
Sbjct: 60 ISEYNFDFKGKKILDIGAGAGFPSVPLLIALDN-EFELV-IIESIAKRCAFLETIKTEFK 117
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADL 153
+ R + + D + ARAL +
Sbjct: 118 LNLTIINDRAENINSYNSYFDYVCARALGSV 148
>gi|50310535|ref|XP_455287.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644423|emb|CAG97995.1| KLLA0F04587p [Kluyveromyces lactis]
Length = 2258
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 15/73 (20%)
Query: 30 EYFYFL-----------FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP----SI 74
EYF+ L F+ W K L SS ++ F + + +L ++ + YP +
Sbjct: 1512 EYFHLLPTELKQNVLVMFVPWVNKFTLKSSEDLDTFMVLNNTFALTIYSKNRYPMEVEQL 1571
Query: 75 WIDLGSGGGFPGI 87
WI LG G F I
Sbjct: 1572 WISLGKGNSFQNI 1584
>gi|254446539|ref|ZP_05060015.1| tyrosine recombinase XerD [Verrucomicrobiae bacterium DG1235]
gi|198260847|gb|EDY85155.1| tyrosine recombinase XerD [Verrucomicrobiae bacterium DG1235]
Length = 309
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 46 VSSSTVEDF------WIRHVEDSLRVFQ----LHPYPSIWIDLGSGGGFPGIITSIQLSS 95
+S +T+E++ ++ HVE S RV + S WI S G + +LSS
Sbjct: 22 LSDNTIENYQSDLSQFLAHVEKSSRVGSWKKLTASHVSDWIYALSEGDYSNASLCRKLSS 81
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
+ L+ + SF VV R F IQE ++++ D+ +A+ L D
Sbjct: 82 LRSLDAYLMRERKIDKSFTEIVVGPKLRRKAPFTLSIQEVERLLSAPDLTTAQGLRD 138
Searching..................................................done
Results from round 2
>gi|254780807|ref|YP_003065220.1| glucose-inhibited division protein B [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040484|gb|ACT57280.1| glucose-inhibited division protein B [Candidatus Liberibacter
asiaticus str. psy62]
Length = 168
Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats.
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE
Sbjct: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK
Sbjct: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK
Sbjct: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
>gi|331083512|ref|ZP_08332624.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
gi|330404205|gb|EGG83753.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
6_1_63FAA]
Length = 240
Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y +IL ++ E ++ +Y L ++W+K +NL + E+ ++H
Sbjct: 1 MNY--DLTILEEGCKEYGIQLNEEQKKQFVQYYELLVEWNKVMNLTGITDFEEVLLKHFV 58
Query: 61 DSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + + S ID+G+G GFPGI I ++ + L++S NK+ +FL V+
Sbjct: 59 DSLSIVKGMDMSKISTCIDVGTGAGFPGIPLKIAFPHLQ---ITLLDSLNKRLNFLNEVI 115
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ G + R ++A + D+ +RA++ L +L EY P++ +
Sbjct: 116 EQLGLTGIQTVHGRAEDAARKAEYREKYDLSVSRAVSRLASLSEYCMPYVKE 167
>gi|153854264|ref|ZP_01995563.1| hypothetical protein DORLON_01557 [Dorea longicatena DSM 13814]
gi|149753039|gb|EDM62970.1| hypothetical protein DORLON_01557 [Dorea longicatena DSM 13814]
Length = 237
Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ IL+ + ++ E E+ + ++ L +W+K +NL + E+ +H DSL +
Sbjct: 1 MDQILKKSLEKIGIEITDEQKEQFDIYHKLLEEWNKVMNLTGITEYEEVVEKHYVDSLSI 60
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ ID+G+G GFPG+ I ++ V L++S NK+ FL V+++
Sbjct: 61 VKVMNMNHVDTVIDVGTGAGFPGLPLKIAFPHLK---VTLLDSLNKRIKFLNTVIEELGL 117
Query: 124 RG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ +RA+A+L TL EY P++
Sbjct: 118 EDIHTIHGRAEDYAKDAAYREKYDLCVSRAVANLATLSEYCLPYVK 163
>gi|150392471|ref|YP_001322520.1| methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
gi|166989741|sp|A6TXE3|RSMG_ALKMQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149952333|gb|ABR50861.1| methyltransferase GidB [Alkaliphilus metalliredigens QYMF]
Length = 239
Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+S IL+ +++ +++L + + L+W++K+NL + + E+ ++H DSL
Sbjct: 2 ESKMILKDGCQELGFHIDDNQVQQLLTYKDILLEWNEKMNLTAITEEEEVMVKHFLDSLS 61
Query: 65 VF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
Q ID+G+G GFPGI + ++ + L++S NK+ FL+ V Q+
Sbjct: 62 CIQSQYLKEEGTMIDVGTGAGFPGIPLKVYFPKLK---LTLLDSLNKRVEFLKEVSQELG 118
Query: 123 ARGKVF-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
F R +E Q D ARA+A L+ L+EY P++
Sbjct: 119 LEDVNFVHGRAEECGQEETHREQYDYAVARAVASLNVLVEYCLPFVK 165
>gi|299820856|ref|ZP_07052745.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
gi|299817877|gb|EFI85112.1| 16S rRNA methyltransferase GidB [Listeria grayi DSM 20601]
Length = 238
Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + L +S + L++ E ++ + ++W++K+NL + + E+ +++H DS+
Sbjct: 2 NPETFKQSLLEKGIELSEKQLQQFEDYFHMLVEWNEKMNLTAITNKEEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + D+G+G GFP I I ++ +++++S K+ +FL + +K
Sbjct: 62 AFYVDFENQASLCDIGAGAGFPSIPIKICFPHLK---ISIVDSLQKRITFLNSLAEKLDL 118
Query: 124 -RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ F R ++ + D ++ARA+A + L E P + +
Sbjct: 119 TDVQFFHSRAEDFGKNKDFRASYDYVTARAVARMSVLAELCLPLVRK 165
>gi|56554498|pdb|1XDZ|A Chain A, Crystal Structure Of Gram_positive Bacillus Subtilis
Glucose Inhibited Division Protein B (Gidb), Structural
Genomics, Mcsg
Length = 240
Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ ++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ +
Sbjct: 9 SGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDF 68
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+ D+G+G GFP + I + V +++S NK+ +FL + + F
Sbjct: 69 NQVNTICDVGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFC 125
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + + D+++ARA+A L L E P + +
Sbjct: 126 HDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 166
>gi|16081152|ref|NP_391980.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312083|ref|ZP_03593930.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316408|ref|ZP_03598213.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321321|ref|ZP_03602615.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325604|ref|ZP_03606898.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
subtilis str. SMY]
gi|121190|sp|P25813|RSMG_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|40027|emb|CAA44405.1| unnamed protein product [Bacillus subtilis]
gi|467384|dbj|BAA05230.1| unknown [Bacillus subtilis]
gi|2636647|emb|CAB16137.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. subtilis str. 168]
Length = 239
Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ ++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ +
Sbjct: 8 SGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDF 67
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+ D+G+G GFP + I + V +++S NK+ +FL + + F
Sbjct: 68 NQVNTICDVGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFC 124
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + + D+++ARA+A L L E P + +
Sbjct: 125 HDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|319399919|gb|EFV88165.1| methyltransferase GidB [Staphylococcus epidermidis FRI909]
Length = 239
Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +S E+ + +Y L ++W+KK+NL S + D +++H DS+ +
Sbjct: 6 LSEKLSEQGIELSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYY 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNGQLSLCDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAETYGKGVYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|321313661|ref|YP_004205948.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
gi|320019935|gb|ADV94921.1| 16S rRNA methyltransferase GidB [Bacillus subtilis BSn5]
Length = 239
Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ ++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ +
Sbjct: 8 SGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDF 67
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+ D+G+G GFP + I + V +++S NK+ +FL + + F
Sbjct: 68 NQVNTICDVGAGAGFPSLPIKICFPHLN---VTIVDSLNKRITFLEKLSEALQLENTTFC 124
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + + D+++ARA+A L L E P + +
Sbjct: 125 HDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|242243260|ref|ZP_04797705.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
gi|242233209|gb|EES35521.1| glucose-inhibited division protein B [Staphylococcus epidermidis
W23144]
Length = 239
Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +S E+ + +Y L ++W+KK+NL S + D +++H DS+ +
Sbjct: 6 LSEKLSEQGIELSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYY 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNGQLSLCDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAETYGKGVYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|313904716|ref|ZP_07838090.1| methyltransferase GidB [Eubacterium cellulosolvens 6]
gi|313470509|gb|EFR65837.1| methyltransferase GidB [Eubacterium cellulosolvens 6]
Length = 240
Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
SIL ++ ++ +Y + ++W+K +NL + + ++ +H DSL + +
Sbjct: 7 SILEDETAKLGLKLTDTQKKQFIRYYEMLVEWNKVMNLTAITEYDEVISKHFVDSLTLAR 66
Query: 68 LHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ ++ ID+G+G GFPG+ +I ++ V L++S K+ FL V+
Sbjct: 67 DINFDNVGNLIDVGTGAGFPGLPLAIAYPNVR---VTLVDSLMKRVKFLNEVIGALGLTN 123
Query: 126 -KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ F R +EA + D++ +RA+A+L TLLEY P+ +
Sbjct: 124 VEAFHSRAEEAGHNRKFRGQYDLVVSRAVANLSTLLEYCTPFAKK 168
>gi|293553539|ref|ZP_06674166.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E1039]
gi|291602294|gb|EFF32519.1| 16S rRNA methyltransferase GidB [Enterococcus faecium E1039]
Length = 269
Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R + ++ + + +Y ++W++K+NL + + +D +++H DSL +
Sbjct: 3 PEEFRQSLAEKGIELTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLA 62
Query: 67 QLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+GSG GFP I I ++ + +++S NK+ +FL + +
Sbjct: 63 FEVDFTQPFSLCDVGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGID 119
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + P + D+++ARA+A L+ L E P Q+
Sbjct: 120 ASLYHDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|296330030|ref|ZP_06872514.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676754|ref|YP_003868426.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153069|gb|EFG93934.1| 16S rRNA methyltransferase GidB [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414998|gb|ADM40117.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 239
Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SI 74
+S LE+ E +Y + ++W++KINL S + ++ +++H DS+ + +
Sbjct: 13 KGITLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDFNQVNT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP + I + V +++S NK+ +FL + + F R +
Sbjct: 73 ICDVGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLEKLSEALQLENTTFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + D+++ARA+A L L E P + +
Sbjct: 130 TFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|291486739|dbj|BAI87814.1| glucose-inhibited division protein B [Bacillus subtilis subsp.
natto BEST195]
Length = 239
Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ ++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ +
Sbjct: 8 SGLAEKGISLSPRQLEQFELYYDMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDF 67
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+ D+G+G GFP + I + V +++S NK+ +FL + + +
Sbjct: 68 NQVNTICDVGAGAGFPSLPIKICFPHLN---VTIVDSLNKRITFLEKLSEALQLENTTYC 124
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + + D+++ARA+A L L E P + +
Sbjct: 125 HDRAETFGQRKDVRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|260588825|ref|ZP_05854738.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
gi|260540604|gb|EEX21173.1| 16S rRNA methyltransferase GidB [Blautia hansenii DSM 20583]
Length = 240
Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y +IL ++ E ++ +Y L ++W+K +NL + E+ ++H
Sbjct: 1 MNY--DLTILEEGCKEYGIQLNEEQKKQFVQYYELLIEWNKVMNLTGITDFEEVLLKHFV 58
Query: 61 DSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + + S ID+G+G GFPGI I ++ + L++S NK+ +FL V+
Sbjct: 59 DSLSIAKGLDMTKISTCIDVGTGAGFPGIPLKIAFPHLQ---ITLLDSLNKRLNFLNEVI 115
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+K G + R ++A + D+ +RA++ L +L EY P++
Sbjct: 116 EKLGLSGIQTVHGRAEDAARKAEHREKYDLSVSRAVSRLASLSEYCMPYVK 166
>gi|172059047|ref|YP_001815507.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
gi|229558761|sp|B1YGA6|RSMG_EXIS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171991568|gb|ACB62490.1| methyltransferase GidB [Exiguobacterium sibiricum 255-15]
Length = 238
Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
VS L++ +Y L ++W++K+NL + + E +++H DS+ +
Sbjct: 13 QGLEVSDHQLQQFRKYYELLVEWNEKMNLTAITDEEGVYLKHFYDSITAAFYFDFTKVET 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP + I ++ V +I+S NK+ FL + + G F R +
Sbjct: 73 VCDVGAGAGFPSLPIKIMFPHLK---VTIIDSLNKRIGFLNMLATELGLEGVAFHHGRAE 129
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPW 163
E Q DV++ARA+A + L EY P
Sbjct: 130 EFGKNKQFREHFDVVTARAVARMSVLAEYCLPL 162
>gi|149182299|ref|ZP_01860778.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
gi|148849991|gb|EDL64162.1| glucose-inhibited division protein B [Bacillus sp. SG-1]
Length = 238
Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
N++ + L + +Y ++W+ K+NL + + E+ +++H DS+ +
Sbjct: 13 KGINLTSKQLAQFAEYYETLVEWNNKMNLTAITDKEEVYLKHFYDSITAAFYLDFNREIR 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I IE V++++S NK+ +FL ++ K G F R +
Sbjct: 73 VCDVGAGAGFPSIPLKICFPQIE---VSIVDSLNKRITFLNHLSDKLGLEGTHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P+ D+++ARA+A + L E P +
Sbjct: 130 TFARNPEHREQYDLVTARAVARMSVLSELCLPLVKN 165
>gi|223043474|ref|ZP_03613520.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
gi|222443263|gb|EEE49362.1| 16S rRNA methyltransferase GidB [Staphylococcus capitis SK14]
Length = 239
Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L N + +S E+ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 6 LSKNLSEHGIELSETQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFFDSITPSFYY 65
Query: 70 PYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFDGELCICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAELGLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAESYGKGAYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|311032248|ref|ZP_07710338.1| 16S rRNA methyltransferase GidB [Bacillus sp. m3-13]
Length = 238
Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
++S + L + + +Y L ++W++K+NL + + E+ +++H DS+
Sbjct: 13 KGISLSSQQLSQFDTYYKLLVEWNEKMNLTAITDEEEVYLKHFYDSITASFYVDLNQELS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I +++ V +++S NK+ +FL+ + + + F R +
Sbjct: 73 LCDVGAGAGFPSIPLKICFPNLK---VTIVDSLNKRITFLQNLANELGLKNVHFVHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A L L E P + +
Sbjct: 130 TFGKNADYREKFDLVTARAVARLSVLSELCLPLVKE 165
>gi|314934965|ref|ZP_07842324.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
gi|313652895|gb|EFS16658.1| 16S rRNA methyltransferase GidB [Staphylococcus caprae C87]
Length = 239
Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S E+ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 6 LSKKLSEHGIELSETQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFYDSITPSFYY 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFDGELSICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAELGLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAESYGKGAYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|253573865|ref|ZP_04851207.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846342|gb|EES74348.1| 16S rRNA methyltransferase GidB [Paenibacillus sp. oral taxon 786
str. D14]
Length = 240
Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW- 75
+ VS E L++ E +Y + W++K+NL + E +I+H DS+ + P I
Sbjct: 15 HGIEVSEEQLKQFERYYEELVSWNEKMNLTGITEREQVYIKHFYDSISLAFHVPMGEIES 74
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+GSG GFPGI I ++ + +++S NK+ FL++VV + ++ R +
Sbjct: 75 KADIGSGAGFPGIPLKICFPHLQ---LTIVDSLNKRIQFLQHVVNELGLNQVRLLHGRAE 131
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A + L E+ P++
Sbjct: 132 DLGRQEDLRDAFDLVTARAVARMAILNEFCLPFVKP 167
>gi|154483915|ref|ZP_02026363.1| hypothetical protein EUBVEN_01621 [Eubacterium ventriosum ATCC
27560]
gi|149735406|gb|EDM51292.1| hypothetical protein EUBVEN_01621 [Eubacterium ventriosum ATCC
27560]
Length = 238
Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D ++L ++ E +EK + +Y + ++ +K +NL S + ++ I+H DSL
Sbjct: 2 DKENLLVKGLSELGLTITEEQIEKFDKYYEMLIETNKVMNLTSITEYDEVIIKHFIDSLL 61
Query: 65 VFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V + ID+G+G GFPGI I ++ + L++S NK+ FL V+ +
Sbjct: 62 VVNIFDINQSKKMIDVGTGAGFPGIPIKIMFPHLQ---ITLLDSLNKRLKFLNNVIDELG 118
Query: 123 AR-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ + D+ +RA+A+L TL EY P++ +
Sbjct: 119 LESIETVHGRAEDIARKEEFREQYDLCVSRAVANLSTLSEYCIPFIAK 166
>gi|257888105|ref|ZP_05667758.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|293379357|ref|ZP_06625501.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
gi|257824159|gb|EEV51091.1| glucose inhibited division protein [Enterococcus faecium 1,141,733]
gi|292641880|gb|EFF60046.1| 16S rRNA methyltransferase GidB [Enterococcus faecium PC4.1]
Length = 237
Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R + ++ +++ +Y ++W++K+NL + + +D +++H DSL +
Sbjct: 3 PEEFRQSLAEKGIELTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P D+GSG GFP I I ++ + +++S NK+ +FL + +
Sbjct: 63 FEVDFTQPLSLCDVGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGID 119
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + PQ + D+++ARA+A L+ L E P Q+
Sbjct: 120 ASLYHDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|167766872|ref|ZP_02438925.1| hypothetical protein CLOSS21_01389 [Clostridium sp. SS2/1]
gi|317499287|ref|ZP_07957560.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
gi|167711420|gb|EDS21999.1| hypothetical protein CLOSS21_01389 [Clostridium sp. SS2/1]
gi|291558411|emb|CBL37211.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SSC/2]
gi|316893456|gb|EFV15665.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
5_1_63FAA]
Length = 236
Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-- 67
LR +S LE+ E +Y + ++ +K +NL + + + +H DSL + +
Sbjct: 4 LREKAAAFGIKLSDHQLEQFETYYEMLVEKNKVMNLTAITEKNEVIDKHFADSLALIKSG 63
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ +D+G+G GFPGI I +E + L++S NK+ FL V++ +
Sbjct: 64 VSLTGQKILDIGTGAGFPGIPLKIAFPELE---IVLLDSLNKRIKFLNEVIEALGLEKIT 120
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ + D + +RA+A+L L EY P++ +
Sbjct: 121 AIHGRAEDFAKQKEYREQFDYVVSRAVANLTVLSEYCLPYVKE 163
>gi|227550629|ref|ZP_03980678.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
gi|227180230|gb|EEI61202.1| glucose-inhibited division protein B [Enterococcus faecium TX1330]
Length = 242
Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R + ++ +++ +Y ++W++K+NL + + +D +++H DSL +
Sbjct: 8 PEEFRQSLAEKGIELTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLA 67
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P D+GSG GFP + I ++ + +++S NK+ +FL + +
Sbjct: 68 FEVDFTQPLSLCDVGSGAGFPSMPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGID 124
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + PQ + D+++ARA+A L+ L E P Q+
Sbjct: 125 ASLYHDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQE 170
>gi|257899263|ref|ZP_05678916.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|293572710|ref|ZP_06683674.1| methyltransferase GidB [Enterococcus faecium E980]
gi|257837175|gb|EEV62249.1| glucose inhibited division protein [Enterococcus faecium Com15]
gi|291607202|gb|EFF36560.1| methyltransferase GidB [Enterococcus faecium E980]
Length = 237
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R + ++ +E+ +Y ++W++K+NL + + +D +++H DSL +
Sbjct: 3 PEEFRQSLAEKGIELTDHQMEQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P D+GSG GFP + I ++ + +++S NK+ +FL + +
Sbjct: 63 FEVDFTQPLSLCDVGSGAGFPSVPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGID 119
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + PQ + D+++ARA+A L+ L E P Q+
Sbjct: 120 ASLYHDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|150398395|ref|YP_001328862.1| 16S rRNA methyltransferase GidB [Sinorhizobium medicae WSM419]
gi|166224616|sp|A6UEE7|RSMG_SINMW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150029910|gb|ABR62027.1| methyltransferase GidB [Sinorhizobium medicae WSM419]
Length = 213
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 92/154 (59%), Positives = 115/154 (74%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
N LN VSRET+EKLE+F LF KW++ INLV+ ST++D W RH+ DS+++FQL P
Sbjct: 5 LNRALNGLRVSRETVEKLEHFASLFQKWARSINLVAPSTLDDLWRRHILDSIQLFQLSPA 64
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P W+DLGSGGGFPG+IT+I LS E G V+L+ES NKKA+FLR +++TAARG V R
Sbjct: 65 PKTWVDLGSGGGFPGVITAICLSETESGWVHLVESNNKKAAFLRVALRETAARGTVHPIR 124
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I+EAP I TCD ISARAL+DL LLEY PW+
Sbjct: 125 IEEAPAEIPTCDAISARALSDLSQLLEYCAPWMT 158
>gi|329724143|gb|EGG60661.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU144]
Length = 239
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +S E+ + +Y L ++W+KK+NL S + D +++H DS+ +
Sbjct: 6 LSEKLSEQGIELSNTQKEQFQKYYQLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYY 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNGQLSLCDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAETYGKGVYRESYDIVTARAVARLTVLSELCLPLVNK 164
>gi|330685280|gb|EGG96941.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU121]
Length = 239
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L N +S E+ + +Y L ++W++K+NL S + + +++H DS+ +
Sbjct: 6 LSEKLKENNIELSNTQKEQFQTYYQLLVEWNEKMNLTSITDEHEVYLKHFYDSITPSFYY 65
Query: 70 PYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++
Sbjct: 66 DFKGSLSICDVGAGAGFPSIPLKIIFPELK---VTIVDSLNKRIQFLNHLADALGLQDVS 122
Query: 127 VFACRIQEAP--QMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAETFGKGDYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|326804298|ref|YP_004322116.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651693|gb|AEA01876.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 239
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +A + +++ +++ E +Y L + W++KINL + + ++ +++H DSL +
Sbjct: 2 NPEEFKAALVEQGIDLTDLQMQQFESYYQLLVSWNEKINLTAITDRDEVYLKHFYDSLTL 61
Query: 66 ---FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+GSG GFP I I ++ V++++S NK+ F+ V ++
Sbjct: 62 AFSLETDLTGKKLVDVGSGAGFPSIPLKIAFPQLQ---VSIVDSLNKRIKFIETVTEELG 118
Query: 123 ARGK-VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
G + R ++ Q D+ +ARA+A L L EY P + +
Sbjct: 119 LAGVSAYHDRAEDFGQNKAFRGQFDLATARAVARLSVLSEYCLPLVKK 166
>gi|257896276|ref|ZP_05675929.1| glucose inhibited division protein [Enterococcus faecium Com12]
gi|257832841|gb|EEV59262.1| glucose inhibited division protein [Enterococcus faecium Com12]
Length = 237
Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R + ++ +++ +Y ++W++K+NL + + +D +++H DSL +
Sbjct: 3 PEEFRQSLAEKGIELTDHQMDQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P D+GSG GFP + I ++ + +++S NK+ +FL + +
Sbjct: 63 FEVDFTQPLSLCDVGSGAGFPSMPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGID 119
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + PQ + D+++ARA+A L+ L E P Q+
Sbjct: 120 ASLYHDRAETFGQNPQFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|229917463|ref|YP_002886109.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
gi|259495495|sp|C4L001|RSMG_EXISA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229468892|gb|ACQ70664.1| methyltransferase GidB [Exiguobacterium sp. AT1b]
Length = 238
Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M LRA + +S L + + ++ + ++W++K+NL + + E+ +++H
Sbjct: 1 MNESQFIEALRAE----GFELSETQLSQFKRYFEMLVEWNEKMNLTAITDREEVYLKHFY 56
Query: 61 DSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + D+G+G GFP + I + V +I+S NK+ +FL +
Sbjct: 57 DSLSAAFHFDFTKVETVCDVGAGAGFPSLPLKILFPHLH---VTIIDSLNKRITFLNELA 113
Query: 119 QKTAARGKVF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
G F R +E + DV++ARA+A + L EY P
Sbjct: 114 LALGLEGVAFHHGRAEEFGKNKKFREQFDVVTARAVARMTVLAEYCLPL 162
>gi|212640675|ref|YP_002317195.1| 16S rRNA methyltransferase GidB [Anoxybacillus flavithermus WK1]
gi|212562155|gb|ACJ35210.1| Methyltransferase GidB [Anoxybacillus flavithermus WK1]
Length = 238
Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSI 74
++S + L + E +Y L ++W++++NL + + E +++H DS+ + + P
Sbjct: 14 KGISLSPQQLTQFETYYQLLVEWNERMNLTAITDKEGVYLKHFFDSITPAFYYDFSQPLS 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I + V++++S K+ +FL ++ + G F R +
Sbjct: 74 ICDVGAGAGFPSIPLKICFPHLH---VSIVDSLQKRITFLNHLAAQLGLEGVAFYHDRAE 130
Query: 134 EAPQ--MITTCDVISARALADLDTLLEYSFPWLY 165
Q + + DV+ ARA+A L L E P +
Sbjct: 131 TFGQKSVRESFDVVMARAVARLSVLSELCLPLVK 164
>gi|27469333|ref|NP_765970.1| glucose-inhibited division protein B [Staphylococcus epidermidis
ATCC 12228]
gi|251811359|ref|ZP_04825832.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|282874716|ref|ZP_06283595.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|29336633|sp|Q8CMN7|RSMG_STAES RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27316883|gb|AAO06058.1|AE016752_91 glucose inhibited division protein B [Staphylococcus epidermidis
ATCC 12228]
gi|251805108|gb|EES57765.1| glucose-inhibited division protein B [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296432|gb|EFA88947.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis SK135]
gi|329735756|gb|EGG72037.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU028]
Length = 239
Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +S E+ + +Y L ++W+KK+NL S + D +++H DS+ +
Sbjct: 6 LSEKLSEQGIELSNTQKEQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYY 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNGQLSLCDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAETYGKGVYRESYDIVTARAVARLTVLSELCLPLVNK 164
>gi|226326136|ref|ZP_03801654.1| hypothetical protein COPCOM_03955 [Coprococcus comes ATCC 27758]
gi|225205678|gb|EEG88032.1| hypothetical protein COPCOM_03955 [Coprococcus comes ATCC 27758]
Length = 238
Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +++ + + +Y + ++W+K +NL + E+ +H DSL +
Sbjct: 1 MSKKFEQQLAELGITLTQTQFNQFDKYYEMLVEWNKVMNLTGITEYEEVNEKHFVDSLAL 60
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPGI I ++ + L++S NK+ FL V+++
Sbjct: 61 VKALDISKVQTVIDIGTGAGFPGIPLKIAFPHLK---ITLLDSLNKRIRFLDSVIEELNL 117
Query: 124 -RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ D+ +RA+A+L TL EY P++
Sbjct: 118 TDIHTIHGRAEDFARQADYREQFDLCVSRAVANLSTLSEYCLPYVK 163
>gi|57865944|ref|YP_187605.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis RP62A]
gi|293367586|ref|ZP_06614239.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|71152076|sp|Q5HS34|RSMG_STAEQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|57636602|gb|AAW53390.1| glucose-inhibited division protein B [Staphylococcus epidermidis
RP62A]
gi|291318299|gb|EFE58692.1| 16S rRNA methyltransferase GidB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736094|gb|EGG72367.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
epidermidis VCU045]
Length = 239
Score = 194 bits (495), Expect = 3e-48, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +S E+ + +Y L ++W+KK+NL S + D +++H DS+ +
Sbjct: 6 LSEKLSEQGIELSNTQKEQFQKYYKLLVEWNKKMNLTSITDEHDVYLKHFYDSIAPSFYY 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNGQLSLCDIGAGAGFPSIPLKIVYPELK---VTIVDSLNKRIQFLNHLAAELGLEDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAEIYGKGVYRESYDIVTARAVARLTVLSELCLPLVKK 164
>gi|70727673|ref|YP_254589.1| 16S rRNA methyltransferase GidB [Staphylococcus haemolyticus
JCSC1435]
gi|82592865|sp|Q4L2Z4|RSMG_STAHJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68448399|dbj|BAE05983.1| glucose inhibited division protein B [Staphylococcus haemolyticus
JCSC1435]
Length = 240
Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S + E+ + +Y L ++W++K+NL S + + +++H DS+ +
Sbjct: 7 LAKELSEHGIELSDKQKEQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDSITPSFYY 66
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK 126
+ D+G+G GFP I + ++ V +++S NK+ FL ++ +
Sbjct: 67 DFNQPLTICDVGAGAGFPSIPLKVVYPELK---VTIVDSLNKRIQFLNHLAAELGLTQVS 123
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + T DV++ARA+A L L E P + +
Sbjct: 124 FVHDRAETFGKGVNRETYDVVTARAVARLTVLSELCLPLVKK 165
>gi|295094322|emb|CBK83413.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus sp. ART55/1]
Length = 235
Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+S + +E+ +Y + ++W+K +NL + + ED I+H DSL + +
Sbjct: 12 GLELSDKQIEQFSKYYDILVEWNKVMNLTAITEKEDVIIKHFADSLLLSKYKDLHENIDV 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFPGI I + + L++S NK+ FL V+ + R ++
Sbjct: 72 IDVGTGAGFPGIPLKIAFPELN---ITLMDSLNKRLKFLDEVIDELGLQDIHTVHSRAED 128
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ +RA+A+L TL E+ P++
Sbjct: 129 GGRDEMHREKYDLAVSRAVANLATLSEWCIPFVKP 163
>gi|15967089|ref|NP_387442.1| glucose-inhibited division protein B [Sinorhizobium meliloti 1021]
gi|307302551|ref|ZP_07582308.1| methyltransferase GidB [Sinorhizobium meliloti BL225C]
gi|307316118|ref|ZP_07595562.1| methyltransferase GidB [Sinorhizobium meliloti AK83]
gi|20177892|sp|Q92KW3|RSMG_RHIME RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15076362|emb|CAC47915.1| Probable glucose inhibited division protein B [Sinorhizobium
meliloti 1021]
gi|306897958|gb|EFN28700.1| methyltransferase GidB [Sinorhizobium meliloti AK83]
gi|306903221|gb|EFN33811.1| methyltransferase GidB [Sinorhizobium meliloti BL225C]
Length = 213
Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats.
Identities = 89/149 (59%), Positives = 113/149 (75%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET++KLE+F LF KW++ INLV+ ST+ED W RH+ DSL+++QL P P W
Sbjct: 9 LNGLRVSRETVQKLEHFASLFQKWARSINLVAPSTLEDLWRRHILDSLQLYQLSPGPKTW 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I LS EGG V+L+ES NKKA+FLR +++T ARG V RI+ A
Sbjct: 69 VDLGSGGGFPGVITAICLSEAEGGWVHLVESNNKKAAFLRVALRETGARGSVHPIRIEAA 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P I +CD ISARALADL LL+Y PW+
Sbjct: 129 PAEIPSCDAISARALADLSQLLDYCAPWM 157
>gi|242372607|ref|ZP_04818181.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
gi|242349662|gb|EES41263.1| glucose-inhibited division protein B [Staphylococcus epidermidis
M23864:W1]
Length = 239
Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S+ E+ + +Y L ++W++K+NL S + D +++H DS+ +
Sbjct: 6 LSEKLREHGIELSQTQKEQFQTYYQLLVEWNEKMNLTSITEEHDVYLKHFYDSITPSFYY 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFDGDKSICDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAAELGLQDVS 122
Query: 127 VFACRIQEA--PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAESYGKGDYRESYDIVTARAVARLTVLSELCLPIVKK 164
>gi|331089221|ref|ZP_08338123.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
gi|330405773|gb|EGG85302.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
3_1_46FAA]
Length = 239
Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S N++ E+ + +Y + ++W+ +NL + ++ ++H DSL +
Sbjct: 4 EKSKFEEELEKLNINLTEHQKEQFDRYYEMLVEWNNVMNLTGITDYDEVNLKHFTDSLTL 63
Query: 66 FQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ I ID+G+G GFPG+ I I V L++S NK+ FL V+++
Sbjct: 64 VRNIDMNKIDAVIDIGTGAGFPGLPIKIAFPHIH---VVLLDSLNKRIKFLNAVIEELDL 120
Query: 124 -RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ + D+ +RA+A+L TL EY P++ +
Sbjct: 121 ADVETLHGRAEDYAKRKEYREQFDLCVSRAVANLSTLSEYCIPFVKR 167
>gi|166032901|ref|ZP_02235730.1| hypothetical protein DORFOR_02622 [Dorea formicigenerans ATCC
27755]
gi|166027258|gb|EDR46015.1| hypothetical protein DORFOR_02622 [Dorea formicigenerans ATCC
27755]
Length = 239
Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L N + + ++ + + + FY + ++W+K +NL + ++ ++H DSL + +++
Sbjct: 8 LIENMKMISVELTDKQVSQFIKFYEMLVEWNKVMNLTGITEYDEVVMKHFVDSLSIVKVN 67
Query: 70 PYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ + ID+G+G GFPGI I I+ + L++S NK+ FL V+ + +
Sbjct: 68 GFDNVTTIIDVGTGAGFPGIPLKIVFPEIK---ITLLDSLNKRIKFLNAVIDELELENIE 124
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ D+ +RA+A+L TL EY P++
Sbjct: 125 TIHGRAEDFSKKEDYREQYDLCVSRAVANLATLSEYCLPYVK 166
>gi|311070641|ref|YP_003975564.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
gi|310871158|gb|ADP34633.1| 16S rRNA methyltransferase GidB [Bacillus atrophaeus 1942]
Length = 239
Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ ++S LE+ E +Y + ++W++KINL S + ++ +++H DS+ +
Sbjct: 8 SGLAEKGISLSSRQLEQFELYYEMLVEWNEKINLTSITEKKEVYLKHFYDSITAAFYVDF 67
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
+ D+G+G GFP + I ++ V++++S NK+ +FL + + F
Sbjct: 68 KQVNTICDVGAGAGFPSLPIKICFPHLQ---VSIVDSLNKRITFLEKLAEALQLENTSFY 124
Query: 129 ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + Q + + D+++ARA+A L L E P + +
Sbjct: 125 HDRAETFGQRQDLRESYDIVTARAVARLSVLSELCLPLVKK 165
>gi|153815415|ref|ZP_01968083.1| hypothetical protein RUMTOR_01650 [Ruminococcus torques ATCC 27756]
gi|317500877|ref|ZP_07959089.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
gi|145847274|gb|EDK24192.1| hypothetical protein RUMTOR_01650 [Ruminococcus torques ATCC 27756]
gi|316897757|gb|EFV19816.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
8_1_57FAA]
Length = 239
Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S N++ E+ + +Y + ++W+ +NL + ++ ++H DSL +
Sbjct: 4 EKSKFEEELEKLNINLTEHQKEQFDRYYEMLVEWNNVMNLTGITDYDEVNLKHFTDSLTL 63
Query: 66 FQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ I ID+G+G GFPG+ I I V L++S NK+ FL V+++
Sbjct: 64 VRNIDMNKIDAVIDIGTGAGFPGLPIKIAFPHIH---VVLLDSLNKRIKFLNAVIEELDL 120
Query: 124 -RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ + D+ +RA+A+L TL EY P++ +
Sbjct: 121 ADVETLHGRAEDYAKRKEYREQFDLCVSRAVANLSTLSEYCIPFVKR 167
>gi|157694473|ref|YP_001488935.1| 16S rRNA methyltransferase GidB [Bacillus pumilus SAFR-032]
gi|166989743|sp|A8FJF8|RSMG_BACP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157683231|gb|ABV64375.1| glucose-inhibited division protein B [Bacillus pumilus SAFR-032]
Length = 239
Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
A +S LE+ E ++ + ++W++K+NL S + E+ +++H DS+ +
Sbjct: 8 AALEEKGITLSPVQLEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISASFFIDF 67
Query: 72 PS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
D+G+G GFP I I + V +++S K+ +FL + + + F
Sbjct: 68 HKVTTICDIGAGAGFPSIPLKICFPHLH---VTIVDSLQKRITFLNELAKGLNLQDTTFY 124
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R + + + + D+++ARA+A L L E P + ++
Sbjct: 125 HDRAETFGQRKEKRESYDLVTARAVARLSVLSELCLPLVKKE 166
>gi|308175807|ref|YP_003922512.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|307608671|emb|CBI45042.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens DSM 7]
gi|328555783|gb|AEB26275.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens TA208]
gi|328914172|gb|AEB65768.1| 7-methylguanosine methyltransferase specific for the 16S rRNA
[Bacillus amyloliquefaciens LL3]
Length = 239
Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
++S LE+ E +Y + ++W++K+NL S + ++ +++H DS+ +
Sbjct: 13 KGISLSDRQLEQFELYYQMLVEWNEKMNLTSITEKKEVYLKHFYDSITAAFYIDFEKVTT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP + I + V +++S NK+ +FL + F R +
Sbjct: 73 LCDVGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLENLADALQLEHTTFVHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + D+++ARA+A L L E P + +
Sbjct: 130 TFGQRKDVRESFDLVTARAVARLSVLSELCLPLVKK 165
>gi|160914902|ref|ZP_02077116.1| hypothetical protein EUBDOL_00910 [Eubacterium dolichum DSM 3991]
gi|158433442|gb|EDP11731.1| hypothetical protein EUBDOL_00910 [Eubacterium dolichum DSM 3991]
Length = 236
Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++ + ++ + + + ++W+KK+NL + + +++ + +H DSL + D+G+
Sbjct: 21 LNDQQQQQFDEYAQMLVEWNKKMNLTAITEIDEIYEKHFLDSLLPSFDMEINGSFCDVGA 80
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE-APQM 138
G GFP I I ++ V ++E+ K+ +FL + +K + V R ++ A +
Sbjct: 81 GAGFPSIPLKIVYPQLK---VTIVETLGKRITFLNALCEKLGLKDVVLVHARAEDYAKEH 137
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
+ D++SARA+A+L L E P +
Sbjct: 138 RESFDIVSARAVANLPMLSELCIPLVK 164
>gi|260558219|ref|ZP_05830415.1| glucose inhibited division protein [Enterococcus faecium C68]
gi|261206909|ref|ZP_05921598.1| glucose inhibited division protein [Enterococcus faecium TC 6]
gi|314940139|ref|ZP_07847319.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a04]
gi|314943030|ref|ZP_07849834.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133C]
gi|314948148|ref|ZP_07851544.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0082]
gi|314953438|ref|ZP_07856356.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133A]
gi|314993823|ref|ZP_07859159.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133B]
gi|314998152|ref|ZP_07863034.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a01]
gi|260075393|gb|EEW63699.1| glucose inhibited division protein [Enterococcus faecium C68]
gi|260078537|gb|EEW66239.1| glucose inhibited division protein [Enterococcus faecium TC 6]
gi|313587864|gb|EFR66709.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a01]
gi|313591714|gb|EFR70559.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133B]
gi|313594541|gb|EFR73386.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133A]
gi|313598230|gb|EFR77075.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133C]
gi|313640644|gb|EFS05224.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0133a04]
gi|313645402|gb|EFS09982.1| 16S rRNA methyltransferase GidB [Enterococcus faecium TX0082]
Length = 242
Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R + ++ + + +Y ++W++K+NL + + +D +++H DSL +
Sbjct: 8 PEEFRQSLAEKGIELTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLA 67
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P D+GSG GFP I I ++ + +++S NK+ +FL + +
Sbjct: 68 FEVDFTQPLSLCDVGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGID 124
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + P + D+++ARA+A L+ L E P Q+
Sbjct: 125 ASLYHDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQE 170
>gi|315174217|gb|EFU18234.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1346]
Length = 300
Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 65 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 124
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 125 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 181
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 182 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 228
>gi|197302260|ref|ZP_03167319.1| hypothetical protein RUMLAC_00987 [Ruminococcus lactaris ATCC
29176]
gi|197298691|gb|EDY33232.1| hypothetical protein RUMLAC_00987 [Ruminococcus lactaris ATCC
29176]
Length = 247
Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ S ++ E+ + +Y L ++W+K +NL + E+ ++H D
Sbjct: 6 RESRSGEKFTEELANLGIELNEHQKEQFDQYYELLVEWNKVMNLTGITEYEEVNLKHFTD 65
Query: 62 SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + ++ ID+G+G GFPGI I +E V L++S NK+ FL V++
Sbjct: 66 SLSIARVKDMHQVQSVIDIGTGAGFPGIPLKIVYPELE---VVLLDSLNKRIKFLDEVIR 122
Query: 120 KTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++ + D+ +RA+A+L TL EY P++
Sbjct: 123 TLGLEKIRTIHGRAEDFAKKKEYRECFDLCVSRAVANLATLSEYCLPFVK 172
>gi|229824650|ref|ZP_04450719.1| hypothetical protein GCWU000282_01997 [Catonella morbi ATCC 51271]
gi|229786021|gb|EEP22135.1| hypothetical protein GCWU000282_01997 [Catonella morbi ATCC 51271]
Length = 240
Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ A + ++ + + + E ++ L ++W++K+NL + + E+ +++H D L
Sbjct: 2 NPETFIAQCAAHGLVLNDQQIAQFERYFQLLVEWNEKMNLTAITQREEVYLKHFYDCLMA 61
Query: 66 F---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L Y D+G+G GFP I I ++ V +++S K+ +F+ ++ ++
Sbjct: 62 LWNMPLDNYALQLCDVGAGAGFPSIPLKIAHPELQ---VTIVDSLQKRLTFIEHLAEELG 118
Query: 123 ARGK-VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
G R ++ Q D+++ARA+A L+ L EY P +
Sbjct: 119 LEGVSCVHGRAEDVGQNPVYRGQFDLVTARAVASLNVLAEYCLPLVK 165
>gi|224475499|ref|YP_002633105.1| 16S rRNA methyltransferase GidB [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254766902|sp|B9DI97|RSMG_STACT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222420106|emb|CAL26920.1| glucose inhibited division protein B [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 240
Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+ ++ + ++ + +Y L ++W++K+NL S + E +++H DS+
Sbjct: 13 HDITLNDKQKQQFQTYYELLVEWNEKMNLTSITDEEGVYLKHFYDSITAAFYIDMNQELS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ FL ++ RG V R +
Sbjct: 73 ICDVGAGAGFPSIPLKIVFPQLK---VTIVDSLNKRIQFLNHLADALDLRGVSVVHERAE 129
Query: 134 EA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARA+A L L E P +
Sbjct: 130 NFGNVRGDNRESYDIVTARAVARLSVLSELCLPLVK 165
>gi|239828705|ref|YP_002951329.1| 16S rRNA methyltransferase GidB [Geobacillus sp. WCH70]
gi|259495497|sp|C5D9Y5|RSMG_GEOSW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|239808998|gb|ACS26063.1| methyltransferase GidB [Geobacillus sp. WCH70]
Length = 238
Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW- 75
++S + L + E +Y L ++W++K+NL + + +++H DSL + +
Sbjct: 13 KGISLSSQALAQFERYYELLMEWNEKMNLTAITDKPSVYLKHFFDSLSPAFYYDFSQSLS 72
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP + I ++ +++++S K+ +FL ++ + F R +
Sbjct: 73 ICDVGAGAGFPSVPLKICFPHLK---LSIVDSLQKRITFLEHLAAELGLTDVAFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+++ARA+A + L E P +
Sbjct: 130 TFGRKKEFRESFDIVTARAVARMSVLSELCLPLVK 164
>gi|163814997|ref|ZP_02206384.1| hypothetical protein COPEUT_01150 [Coprococcus eutactus ATCC 27759]
gi|158449680|gb|EDP26675.1| hypothetical protein COPEUT_01150 [Coprococcus eutactus ATCC 27759]
Length = 236
Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+S + L++ +Y + ++W+ +NL + + +D I+H DSL +++
Sbjct: 12 GLELSEKQLQQFSRYYDILVEWNSFMNLTAITDRDDVIIKHFADSLLLYKYKDLHDNLSV 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+G GFPGI I ++ V L++S NK+ +FL V+++ + R ++
Sbjct: 72 LDVGTGAGFPGIPLKIAFPELK---VTLMDSLNKRLNFLNEVIKELELDNVETVHSRAED 128
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
P D++ +RA+A+L TL E+ P+
Sbjct: 129 GGKNPLYREKYDLVVSRAVANLATLSEWCLPFTK 162
>gi|222152196|ref|YP_002561356.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
gi|254766896|sp|B9E8Z2|RSMG_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222121325|dbj|BAH18660.1| glucose-inhibited division protein B [Macrococcus caseolyticus
JCSC5402]
Length = 238
Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ E ++ +Y ++W++KINL + + E+ +++H DS+ + +
Sbjct: 13 KGFELTDEQQKQFAIYYETLVEWNEKINLTAVTEKEEVYLKHFFDSITPSFYFDFNKVKS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+G+G GFP I I +E + +++S NK+ +FL ++ + R +
Sbjct: 73 ICDVGAGAGFPSIPLKILYPHLE---ITIVDSLNKRINFLNHLSAELNLTNCHFVHDRAE 129
Query: 134 EAP--QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E P + +
Sbjct: 130 TFGKGEYRESFDVVTARAVARLSVLSELCLPLVKK 164
>gi|194016524|ref|ZP_03055138.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
gi|194011997|gb|EDW21565.1| 16S rRNA methyltransferase GidB [Bacillus pumilus ATCC 7061]
Length = 239
Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
A +S LE+ E ++ + ++W++K+NL S + E+ +++H DS+ +
Sbjct: 8 AALEEKGMTLSPVQLEQFETYFRMLVEWNEKMNLTSITEKEEVYLKHFYDSISASFFIDF 67
Query: 72 PS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
D+G+G GFP I I + V +++S K+ +FL + + + F
Sbjct: 68 HKVTTICDIGAGAGFPSIPLKICFPHLH---VTIVDSLQKRITFLNELAKGLNLQDTTFY 124
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R + + + + D+++ARA+A L L E P + ++
Sbjct: 125 HDRAETFGQRKEKRESYDLVTARAVARLSVLSELCLPLVKKE 166
>gi|52082646|ref|YP_081437.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis ATCC 14580]
gi|52788045|ref|YP_093874.1| 16S rRNA methyltransferase GidB [Bacillus licheniformis ATCC 14580]
gi|319648512|ref|ZP_08002728.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
gi|81608802|sp|Q65CN3|RSMG_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52005857|gb|AAU25799.1| glucose-inhibited division protein [Bacillus licheniformis ATCC
14580]
gi|52350547|gb|AAU43181.1| GidB [Bacillus licheniformis ATCC 14580]
gi|317389591|gb|EFV70402.1| ribosomal RNA small subunit methyltransferase G [Bacillus sp.
BT1B_CT2]
Length = 239
Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
A ++S LE+ E +Y ++W++K+NL S + ++ +++H DS+ +
Sbjct: 8 AGLEKKGISLSSFQLEQFETYYEWLVEWNEKMNLTSITEKKEVYLKHFYDSIAASFYVDF 67
Query: 72 PS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
D+G+G GFP + I + V +++S NK+ FL + F
Sbjct: 68 KKMNTLCDVGAGAGFPSLPIKICFPHLH---VTIVDSLNKRIHFLNQLSDALKLENTAFY 124
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 125 HDRAETFGRSKDHRESYDVVTARAVARLSVLSELCLPLVKK 165
>gi|69247496|ref|ZP_00604366.1| Glucose inhibited division protein [Enterococcus faecium DO]
gi|257878638|ref|ZP_05658291.1| glucose inhibited division protein [Enterococcus faecium 1,230,933]
gi|257881304|ref|ZP_05660957.1| glucose inhibited division protein [Enterococcus faecium 1,231,502]
gi|257885579|ref|ZP_05665232.1| glucose inhibited division protein [Enterococcus faecium 1,231,501]
gi|257890521|ref|ZP_05670174.1| glucose inhibited division protein [Enterococcus faecium 1,231,410]
gi|257893097|ref|ZP_05672750.1| glucose inhibited division protein [Enterococcus faecium 1,231,408]
gi|258615278|ref|ZP_05713048.1| 16S rRNA methyltransferase GidB [Enterococcus faecium DO]
gi|289567292|ref|ZP_06447671.1| 16S rRNA methyltransferase GidB [Enterococcus faecium D344SRF]
gi|293563243|ref|ZP_06677695.1| methyltransferase GidB [Enterococcus faecium E1162]
gi|293569167|ref|ZP_06680473.1| methyltransferase GidB [Enterococcus faecium E1071]
gi|294616667|ref|ZP_06696438.1| methyltransferase GidB [Enterococcus faecium E1636]
gi|294619737|ref|ZP_06699142.1| methyltransferase GidB [Enterococcus faecium E1679]
gi|294623751|ref|ZP_06702579.1| methyltransferase GidB [Enterococcus faecium U0317]
gi|68194821|gb|EAN09296.1| Glucose inhibited division protein [Enterococcus faecium DO]
gi|257812866|gb|EEV41624.1| glucose inhibited division protein [Enterococcus faecium 1,230,933]
gi|257816962|gb|EEV44290.1| glucose inhibited division protein [Enterococcus faecium 1,231,502]
gi|257821435|gb|EEV48565.1| glucose inhibited division protein [Enterococcus faecium 1,231,501]
gi|257826881|gb|EEV53507.1| glucose inhibited division protein [Enterococcus faecium 1,231,410]
gi|257829476|gb|EEV56083.1| glucose inhibited division protein [Enterococcus faecium 1,231,408]
gi|289160911|gb|EFD08832.1| 16S rRNA methyltransferase GidB [Enterococcus faecium D344SRF]
gi|291588136|gb|EFF19978.1| methyltransferase GidB [Enterococcus faecium E1071]
gi|291590487|gb|EFF22225.1| methyltransferase GidB [Enterococcus faecium E1636]
gi|291594007|gb|EFF25476.1| methyltransferase GidB [Enterococcus faecium E1679]
gi|291596705|gb|EFF27928.1| methyltransferase GidB [Enterococcus faecium U0317]
gi|291604782|gb|EFF34264.1| methyltransferase GidB [Enterococcus faecium E1162]
Length = 237
Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R + ++ + + +Y ++W++K+NL + + +D +++H DSL +
Sbjct: 3 PEEFRQSLAEKGIELTDHQMNQFAIYYRTLVEWNEKMNLTAITDEKDVYLKHFYDSLTLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P D+GSG GFP I I ++ + +++S NK+ +FL + +
Sbjct: 63 FEVDFTQPLSLCDVGSGAGFPSIPLKIAFPELQ---ITIVDSLNKRITFLSELTRLLGID 119
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + P + D+++ARA+A L+ L E P Q+
Sbjct: 120 ASLYHDRAETFGQNPHFRASFDLVTARAVARLNVLAELCLPLAKQE 165
>gi|160932437|ref|ZP_02079827.1| hypothetical protein CLOLEP_01272 [Clostridium leptum DSM 753]
gi|156868396|gb|EDO61768.1| hypothetical protein CLOLEP_01272 [Clostridium leptum DSM 753]
Length = 236
Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDL 78
+S E L++ + + L L+W+KK+NL + E+ I+H DSL + P + ID+
Sbjct: 18 LSPEQLDQFDGYCRLLLEWNKKMNLTAIREPEEVLIKHFVDSLALLGFAELPQGAKLIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ- 137
G+G GFPG+ I + + L++S K+ +FL+ V + R ++ +
Sbjct: 78 GTGAGFPGLPLKIARPDLR---LALLDSLKKRLTFLQAVCGTLGLDADIIHSRAEDGGKL 134
Query: 138 --MITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA+A L+ L EY P++
Sbjct: 135 SGLRQNFDAAVSRAVAPLNLLAEYCLPFVR 164
>gi|307284003|ref|ZP_07564173.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
gi|306503374|gb|EFM72623.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0860]
Length = 291
Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 56 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 115
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 116 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 172
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 173 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|160882057|ref|YP_001561025.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
gi|189039497|sp|A9KLX7|RSMG_CLOPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160430723|gb|ABX44286.1| methyltransferase GidB [Clostridium phytofermentans ISDg]
Length = 242
Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
NS ++++ LE+ E +Y L ++W+ +NL + + E+ +H DSL
Sbjct: 2 RDNSTFIQGLRSLGMDLNKHQLEQFEIYYDLLIEWNSFMNLTAITEYEEVIQKHFLDSLS 61
Query: 65 VFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+G+G GFPGI I + V L++S NK+ +FL V+ +
Sbjct: 62 LIKSYQIKTGDTLLDMGTGAGFPGIPLKIAYPDLN---VLLMDSLNKRINFLNEVINRLE 118
Query: 123 ARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R +E D++ +RA+A +L E P++ +
Sbjct: 119 LKNISAMHGRAEEQARKLDFREKFDIVVSRAVARTASLAELCLPYVKK 166
>gi|259048139|ref|ZP_05738540.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
gi|259035200|gb|EEW36455.1| 16S rRNA methyltransferase GidB [Granulicatella adiacens ATCC
49175]
Length = 237
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSI 74
++ +S E ++ + ++ L ++W++K+NL + + E +++H DSL + F
Sbjct: 13 IHGITLSDEQKKQFDQYFHLLVEWNEKMNLTAITDEEGVYLKHFYDSLALGFHHELTDQT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ +FL +V+ + + F R +
Sbjct: 73 LCDVGAGAGFPSIPLKIVFPDLK---VTIVDSLNKRITFLNTLVETLGLKDVQCFHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + DV++ARA+A L L E+ P + +
Sbjct: 130 TFGQNKDFRASFDVVTARAVAKLSVLSEFCMPLVKK 165
>gi|312902981|ref|ZP_07762170.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|310633649|gb|EFQ16932.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0635]
gi|315163401|gb|EFU07418.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0645]
Length = 300
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 65 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 124
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 125 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 181
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 182 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 228
>gi|323465552|gb|ADX77705.1| 16S rRNA methyltransferase GidB [Staphylococcus pseudintermedius
ED99]
Length = 239
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S ++ E +Y + ++W++KINL S + + +++H DS+ H
Sbjct: 6 LATQLSEHGITLSEHQKQQFEKYYEMLVEWNEKINLTSITEKHEVYLKHFYDSITPSFYH 65
Query: 70 PYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ D+G+G GFP I I I V ++++ NK+ FL + + G +
Sbjct: 66 DFNQSLNLCDVGAGAGFPSIPLKIIFPEIH---VTIVDALNKRIQFLNQLAEALELEGVR 122
Query: 127 VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A + L E P + +
Sbjct: 123 FVHDRAETFAKNEDYRASFDVVTARAVARMTVLSELCIPLVKK 165
>gi|227518144|ref|ZP_03948193.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227555650|ref|ZP_03985697.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229547164|ref|ZP_04435889.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294781216|ref|ZP_06746563.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|307268879|ref|ZP_07550244.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|307273954|ref|ZP_07555164.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|307277345|ref|ZP_07558443.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|307289974|ref|ZP_07569900.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|312901334|ref|ZP_07760615.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|312952967|ref|ZP_07771823.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|227074412|gb|EEI12375.1| glucose-inhibited division protein B [Enterococcus faecalis TX0104]
gi|227175227|gb|EEI56199.1| glucose-inhibited division protein B [Enterococcus faecalis HH22]
gi|229307746|gb|EEN73733.1| glucose-inhibited division protein B [Enterococcus faecalis TX1322]
gi|294451679|gb|EFG20134.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis PC1.1]
gi|306498968|gb|EFM68460.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0411]
gi|306505979|gb|EFM75151.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2134]
gi|306509262|gb|EFM78322.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0855]
gi|306514795|gb|EFM83345.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4248]
gi|310629108|gb|EFQ12391.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0102]
gi|311291567|gb|EFQ70123.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0470]
gi|315030098|gb|EFT42030.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4000]
gi|315033591|gb|EFT45523.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0017]
gi|315036256|gb|EFT48188.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0027]
gi|315148291|gb|EFT92307.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX4244]
gi|315151256|gb|EFT95272.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0012]
gi|315153741|gb|EFT97757.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0031]
gi|315155033|gb|EFT99049.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0043]
gi|315158678|gb|EFU02695.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0312]
gi|315172084|gb|EFU16101.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1342]
gi|315576179|gb|EFU88370.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309B]
gi|315582990|gb|EFU95181.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0309A]
gi|327536398|gb|AEA95232.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis OG1RF]
Length = 291
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 56 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 115
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 116 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 172
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 173 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|258423242|ref|ZP_05686134.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|257846571|gb|EEV70593.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9635]
gi|302334324|gb|ADL24517.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus JKD6159]
gi|323439703|gb|EGA97421.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O11]
gi|323443276|gb|EGB00893.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus O46]
Length = 239
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|295398148|ref|ZP_06808197.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
gi|294973667|gb|EFG49445.1| 16S rRNA methyltransferase GidB [Aerococcus viridans ATCC 11563]
Length = 238
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +++ ++ + + + ++ L ++W++KINL + + +E+ +++H DSL V
Sbjct: 2 NPEQFKSSLAEAGIQLNDQQMAQFNRYFELLVEWNEKINLTAITALEEVYLKHFYDSLTV 61
Query: 66 ---FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ +D+GSG GFP I I L +++ + +++S NK+ +F+ VV +
Sbjct: 62 AMHVEMADQEYRLVDVGSGAGFPSIPLKIALPNLD---ITIVDSLNKRINFINEVVNELG 118
Query: 123 ARG-KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G + R + + PQ D +ARA+A L+ L E+ P + +
Sbjct: 119 LEGVHAYHDRAEIFGQNPQFRDQFDFATARAVARLNLLAEFCLPLVKK 166
>gi|293384807|ref|ZP_06630652.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|293388229|ref|ZP_06632748.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|312908849|ref|ZP_07767788.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|312979508|ref|ZP_07791190.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
gi|291077889|gb|EFE15253.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis R712]
gi|291082376|gb|EFE19339.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis S613]
gi|310625287|gb|EFQ08570.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 512]
gi|311287690|gb|EFQ66246.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis DAPTO 516]
Length = 291
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 56 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 115
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 116 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 172
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 173 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|21284357|ref|NP_647445.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MW2]
gi|49487487|ref|YP_044708.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651104|ref|YP_187522.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus COL]
gi|87161954|ref|YP_495278.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88196665|ref|YP_501496.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151222822|ref|YP_001333644.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161510919|ref|YP_001576578.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253730395|ref|ZP_04864560.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|258451371|ref|ZP_05699402.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|262049465|ref|ZP_06022337.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|262051896|ref|ZP_06024111.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|282920715|ref|ZP_06328434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|284023033|ref|ZP_06377431.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 132]
gi|294849824|ref|ZP_06790564.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|297209456|ref|ZP_06925854.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911480|ref|ZP_07128929.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|23821578|sp|Q8NUF9|RSMG_STAAW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976399|sp|Q6G5W6|RSMG_STAAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71152075|sp|Q5HCI5|RSMG_STAAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122538498|sp|Q2FUQ4|RSMG_STAA8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123484189|sp|Q2FDF0|RSMG_STAA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|172049079|sp|A6QKK0|RSMG_STAAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040723|sp|A8YYR9|RSMG_STAAT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21205801|dbj|BAB96493.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus MW2]
gi|49245930|emb|CAG44411.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57285290|gb|AAW37384.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus COL]
gi|87127928|gb|ABD22442.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87204223|gb|ABD32033.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150375622|dbj|BAF68882.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160369728|gb|ABX30699.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253725875|gb|EES94604.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|257860901|gb|EEV83718.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5948]
gi|259160223|gb|EEW45252.1| glucose-inhibited division protein B [Staphylococcus aureus
930918-3]
gi|259162462|gb|EEW47032.1| glucose-inhibited division protein B [Staphylococcus aureus D30]
gi|282594123|gb|EFB99111.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9765]
gi|294823372|gb|EFG39801.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9754]
gi|296885917|gb|EFH24852.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300887659|gb|EFK82855.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus TCH70]
gi|315197914|gb|EFU28247.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141413|gb|EFW33256.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144396|gb|EFW36161.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329731847|gb|EGG68207.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21189]
gi|329732581|gb|EGG68931.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21193]
Length = 239
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIQLTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|315284177|ref|ZP_07872085.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
gi|313612177|gb|EFR86411.1| 16S rRNA methyltransferase GidB [Listeria marthii FSL S4-120]
Length = 238
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP I I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFESICDVGAGAGFPSIPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D ++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDFVTARAVARMSVLSELCMPLVKK 165
>gi|82752288|ref|YP_418029.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus RF122]
gi|123549494|sp|Q2YZC0|RSMG_STAAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82657819|emb|CAI82274.1| glucose inhibited division protein B [Staphylococcus aureus RF122]
Length = 239
Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKQQFQTYYCLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|315168466|gb|EFU12483.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1341]
Length = 291
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 56 PEEFRQLLAEKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 115
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 116 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 172
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 173 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|218283288|ref|ZP_03489343.1| hypothetical protein EUBIFOR_01932 [Eubacterium biforme DSM 3989]
gi|218215978|gb|EEC89516.1| hypothetical protein EUBIFOR_01932 [Eubacterium biforme DSM 3989]
Length = 233
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ L ++ E + + E + L ++W++K+NL + + E+ W +H DS+ F
Sbjct: 6 FQKACLEAGIQLNEEQMNRFEKYMQLLIEWNEKMNLTAITQEEEVWEKHFYDSIMPFSNI 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ D+GSG GFPGI I + + L+E K+ FL V + +
Sbjct: 66 DFE-TMCDIGSGAGFPGIPVKIAFPHVH---MTLVEPLQKRCRFLNEVKTQLNLENLDIL 121
Query: 129 ACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ A + DV+SARA+A L LLE P++
Sbjct: 122 NVRAEDLAKEKRECFDVVSARAVAKLSILLELCVPFVK 159
>gi|315640393|ref|ZP_07895506.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
gi|315483849|gb|EFU74332.1| glucose inhibited division protein B [Enterococcus italicus DSM
15952]
Length = 238
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ ++ E + + + ++ L ++W++KINL + + ++ +++H DS+ +
Sbjct: 3 PEEFKTQLQSQGIQLTDEQMYQFKRYFELLVEWNEKINLTAITEEKEVYLKHFYDSILLA 62
Query: 67 --QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + D+GSG GFP I I +++ V +++S NK+ +FL +VQ+
Sbjct: 63 FSEDFDANASLCDVGSGAGFPSIPLKIVFPTLQ---VTIVDSLNKRITFLNELVQELGLE 119
Query: 125 -GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R + + + D ++ARA+A L+ L E P + +
Sbjct: 120 QVSLYHDRAETFGQNRDFRESFDYVTARAVARLNVLSELCLPLVKK 165
>gi|319891295|ref|YP_004148170.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
gi|317160991|gb|ADV04534.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Staphylococcus pseudintermedius HKU10-03]
Length = 239
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S ++ E +Y + ++W++KINL S + + +++H DS+ H
Sbjct: 6 LATQLSEHGITLSEHQKQQFEKYYEMLVEWNEKINLTSITEKHEVYLKHFYDSITPSFYH 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ D+G+G GFP I I I V ++++ NK+ FL + + G +
Sbjct: 66 DFNQPLNLCDVGAGAGFPSIPLKIIFPEIH---VTIVDALNKRIQFLNQLAEALELEGVR 122
Query: 127 VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + ++ DV++ARA+A + L E P + +
Sbjct: 123 FVHDRAETFAKNEDYRSSFDVVTARAVARMTVLSELCIPLVKK 165
>gi|229550734|ref|ZP_04439459.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|307286501|ref|ZP_07566600.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|229304167|gb|EEN70163.1| glucose-inhibited division protein B [Enterococcus faecalis ATCC
29200]
gi|306502374|gb|EFM71651.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0109]
gi|315165660|gb|EFU09677.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1302]
Length = 291
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 56 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 115
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 116 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 172
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 173 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKRE 219
>gi|229829505|ref|ZP_04455574.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
gi|229791936|gb|EEP28050.1| hypothetical protein GCWU000342_01597 [Shuttleworthia satelles DSM
14600]
Length = 241
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y S N L Y +S + +Y + ++W+K++NL + + ++ +H
Sbjct: 1 MEYDISKFTEGLNCL--GYQLSEHQYQSFLTYYDMLIEWNKRMNLTTITEYQEVVSKHFL 58
Query: 61 DSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DSL + + +DLG+G GFPGI I ++ + L++S NK+ FL+ V+
Sbjct: 59 DSLSISNICSGLEGKLLDLGTGAGFPGIPLKIVYPDLK---ITLMDSLNKRIRFLQEVID 115
Query: 120 KTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + R +E + + D + +RA+A++ TL EY P++ +
Sbjct: 116 RLEFKNIEAIHGRAEEMSRQKKYRESYDHVVSRAVANISTLSEYCLPFVRE 166
>gi|288554599|ref|YP_003426534.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
gi|288545759|gb|ADC49642.1| 16S rRNA methyltransferase GidB [Bacillus pseudofirmus OF4]
Length = 237
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIW 75
++S + L++ E ++ + ++W++K+NL + ++ ED +I+H DS+ + +
Sbjct: 14 GIDLSEKQLQQFERYFNILVEWNEKMNLTALTSEEDVYIKHFYDSISASFFYSFEAGQKI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ- 133
ID+G+G GFP I I I V++++S K+ FL ++ + G F R +
Sbjct: 74 IDVGAGAGFPSIPLKILYPEIH---VSIVDSLKKRIGFLEHLASELELDGVAFYHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ P D+++ARA+A + L E P +
Sbjct: 131 FGQNPAHREQYDIVTARAVARMSVLAELCLPLVK 164
>gi|289436054|ref|YP_003465926.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289172298|emb|CBH28844.1| glucose-inhibited division protein B [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 238
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSEAQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I +E V++++S K+ +FL + +K A F R +
Sbjct: 73 ICDVGAGAGFPSIPIKICFPHLE---VSIVDSLKKRMTFLDALAEKLALTNVHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 TFGQNKAHREKYDLVTARAVARMSVLSELCLPLVKK 165
>gi|29377741|ref|NP_816895.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis V583]
gi|255971517|ref|ZP_05422103.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255974467|ref|ZP_05425053.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256761822|ref|ZP_05502402.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256957048|ref|ZP_05561219.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256960912|ref|ZP_05565083.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256963950|ref|ZP_05568121.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|257078725|ref|ZP_05573086.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|257083973|ref|ZP_05578334.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257417390|ref|ZP_05594384.1| glucose inhibited division protein [Enterococcus faecalis AR01/DG]
gi|257418873|ref|ZP_05595867.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257421312|ref|ZP_05598302.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|38257437|sp|Q82YY1|RSMG_ENTFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29345209|gb|AAO82965.1| glucose-inhibited division protein B [Enterococcus faecalis V583]
gi|255962535|gb|EET95011.1| glucose inhibited division protein [Enterococcus faecalis T1]
gi|255967339|gb|EET97961.1| glucose inhibited division protein [Enterococcus faecalis T2]
gi|256683073|gb|EEU22768.1| glucose inhibited division protein [Enterococcus faecalis T3]
gi|256947544|gb|EEU64176.1| glucose inhibited division protein [Enterococcus faecalis DS5]
gi|256951408|gb|EEU68040.1| glucose inhibited division protein [Enterococcus faecalis Merz96]
gi|256954446|gb|EEU71078.1| glucose inhibited division protein [Enterococcus faecalis HIP11704]
gi|256986755|gb|EEU74057.1| glucose inhibited division protein [Enterococcus faecalis JH1]
gi|256992003|gb|EEU79305.1| glucose inhibited division protein [Enterococcus faecalis Fly1]
gi|257159218|gb|EEU89178.1| glucose inhibited division protein [Enterococcus faecalis ARO1/DG]
gi|257160701|gb|EEU90661.1| glucose inhibited division protein [Enterococcus faecalis T11]
gi|257163136|gb|EEU93096.1| methyltransferase gidB [Enterococcus faecalis X98]
gi|323479207|gb|ADX78646.1| methyltransferase GidB [Enterococcus faecalis 62]
Length = 238
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 3 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 63 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 119
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 120 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 166
>gi|256854949|ref|ZP_05560310.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
gi|256709462|gb|EEU24509.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
faecalis T8]
Length = 238
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 3 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 63 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 119
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 120 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 166
>gi|160893420|ref|ZP_02074205.1| hypothetical protein CLOL250_00969 [Clostridium sp. L2-50]
gi|156864815|gb|EDO58246.1| hypothetical protein CLOL250_00969 [Clostridium sp. L2-50]
Length = 240
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWI 76
+S LE+ + +Y L ++W+K +NL + ED I+H DSL + + I
Sbjct: 13 IELSDHQLEQFQKYYELLVEWNKVMNLTAIIEKEDVIIKHFADSLLLAKYKKLDESLSVI 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPGI I ++ V L++S NK+ FL V++ + R ++
Sbjct: 73 DVGTGAGFPGIPLKIAFPGLK---VTLMDSLNKRVKFLNEVIRTLELDDIEAVHSRAEDG 129
Query: 136 P---QMITTCDVISARALADLDTLLEYSFPWLY 165
Q D+ +RA+A+L +L E+ P++
Sbjct: 130 GRNVQYREKYDLAVSRAVANLSSLSEFCMPFVK 162
>gi|210614310|ref|ZP_03290158.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
gi|210150726|gb|EEA81735.1| hypothetical protein CLONEX_02372 [Clostridium nexile DSM 1787]
Length = 237
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
++ E + + FY L ++W+K +NL + E+ +H DSL + + + ID+
Sbjct: 16 LNDEQKRQFDSFYELLVEWNKVMNLTGITEYEEVNEKHFVDSLSITKAIDMNCVDNLIDI 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA-- 135
G+G GFPGI I ++ V L++S NK+ FL V+++ + R ++
Sbjct: 76 GTGAGFPGIPLKIAFPHLK---VVLLDSLNKRIKFLNTVIEELELIDIETIHGRAEDFAK 132
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+A+L TL EY P+++
Sbjct: 133 QGEYREQFDLCVSRAVANLSTLSEYCMPYIH 163
>gi|257088448|ref|ZP_05582809.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
gi|256997260|gb|EEU83780.1| glucose inhibited division protein B [Enterococcus faecalis CH188]
Length = 238
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 3 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 63 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 119
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 120 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 166
>gi|327438169|dbj|BAK14534.1| predicted S-adenosylmethionine-dependent methyltransferase
[Solibacillus silvestris StLB046]
Length = 238
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S + + + ++ L ++W++K+NL + + +E +++H DS+ +
Sbjct: 13 KGIELSEHQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFYDSISASFYFDFTKVTT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ + +++S NK+ +FL ++ + F R +
Sbjct: 73 VCDVGAGAGFPSIPIKICFPHLQ---ITIVDSLNKRITFLNHLTNELNLDHMTFVHARAE 129
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q DV++ARA+A L L E P +
Sbjct: 130 EFGQNAAYREKFDVVTARAVARLSVLSELCIPLAKE 165
>gi|253733843|ref|ZP_04868008.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
gi|253728146|gb|EES96875.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH130]
Length = 239
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIQLTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDIS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|225570318|ref|ZP_03779343.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
gi|225160850|gb|EEG73469.1| hypothetical protein CLOHYLEM_06415 [Clostridium hylemonae DSM
15053]
Length = 237
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ IL+ +++ E+ E FY L ++W+K +NL + E+ +H DSL +
Sbjct: 1 MSKILKTKLQELNISINDRQEEQFEQFYDLLIEWNKVMNLTGITEYEEVVEKHFVDSLSL 60
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPGI I + + L++S NK+ FL V+++T
Sbjct: 61 VKAIEIDKIHSVIDIGTGAGFPGIPLKIAFPHLN---ITLLDSLNKRIRFLDTVIERTGL 117
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++ + D+ +RA+A+L TL EY P++
Sbjct: 118 KDIRTIHGRAEDYAKQKEYREMYDLCVSRAVANLATLSEYCIPYIR 163
>gi|315579758|gb|EFU91949.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX0630]
Length = 275
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 65 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 124
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 125 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 181
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 182 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 228
>gi|254827370|ref|ZP_05232057.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
gi|254830761|ref|ZP_05235416.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 10403S]
gi|255016996|ref|ZP_05289122.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL F2-515]
gi|255025452|ref|ZP_05297438.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-003]
gi|258599748|gb|EEW13073.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL N3-165]
Length = 238
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S + +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|325265451|ref|ZP_08132174.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
gi|324029309|gb|EGB90601.1| 16S rRNA methyltransferase GidB [Clostridium sp. D5]
Length = 237
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIW 75
+ + ++ + +Y L +W+K +NL + ++ +H DSL + +
Sbjct: 13 NIQLDEKQKQQFQRYYELLTEWNKVMNLTGITDYDEVNEKHFVDSLSIVKAVDIENIKTV 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G GFPG+ I + V L++S NK+ FL V+++ + R ++
Sbjct: 73 IDIGTGAGFPGLPLKIVYPQLH---VVLLDSLNKRVKFLNTVIEELKLDDIETLHGRAED 129
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+A+L TL EY P++
Sbjct: 130 YARQTNYREQFDLCVSRAVANLSTLSEYCLPYIR 163
>gi|16804839|ref|NP_466324.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes EGD-e]
gi|47095609|ref|ZP_00233217.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|224502785|ref|ZP_03671092.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-561]
gi|254899740|ref|ZP_05259664.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes J0161]
gi|254913057|ref|ZP_05263069.1| methyltransferase gidB [Listeria monocytogenes J2818]
gi|254937438|ref|ZP_05269135.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|255028091|ref|ZP_05300042.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes LO28]
gi|284800312|ref|YP_003412177.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284993497|ref|YP_003415265.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|20177887|sp|Q8Y3N3|RSMG_LISMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16412302|emb|CAD01015.1| GidB protein [Listeria monocytogenes EGD-e]
gi|47016039|gb|EAL06964.1| glucose-inhibited division protein B [Listeria monocytogenes str.
1/2a F6854]
gi|258610040|gb|EEW22648.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes F6900]
gi|284055874|gb|ADB66815.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5578]
gi|284058964|gb|ADB69903.1| glucose-inhibited division protein B [Listeria monocytogenes
08-5923]
gi|293591057|gb|EFF99391.1| methyltransferase gidB [Listeria monocytogenes J2818]
Length = 238
Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S + +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|49484905|ref|YP_042129.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MRSA252]
gi|221141511|ref|ZP_03566004.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|257424192|ref|ZP_05600621.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257426869|ref|ZP_05603271.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257432152|ref|ZP_05608515.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257435113|ref|ZP_05611164.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|282907043|ref|ZP_06314891.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282910022|ref|ZP_06317830.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282912910|ref|ZP_06320702.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282922538|ref|ZP_06330228.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|283959480|ref|ZP_06376921.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293497963|ref|ZP_06665817.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|293511553|ref|ZP_06670247.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|293550162|ref|ZP_06672834.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|295429293|ref|ZP_06821915.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589205|ref|ZP_06947846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|304379944|ref|ZP_07362673.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|55976401|sp|Q6GD94|RSMG_STAAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49243034|emb|CAG41768.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257273210|gb|EEV05312.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257276500|gb|EEV07951.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257283031|gb|EEV13163.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus E1410]
gi|257285709|gb|EEV15825.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M876]
gi|269942296|emb|CBI50711.1| putative glucose inhibited division protein B [Staphylococcus
aureus subsp. aureus TW20]
gi|282314759|gb|EFB45145.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
C101]
gi|282323010|gb|EFB53329.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M899]
gi|282326088|gb|EFB56393.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282329942|gb|EFB59463.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Btn1260]
gi|283789072|gb|EFC27899.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919209|gb|EFD96285.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M1015]
gi|291096894|gb|EFE27152.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus 58-424]
gi|291465511|gb|EFF08043.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus M809]
gi|295127052|gb|EFG56696.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297577716|gb|EFH96429.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MN8]
gi|302752587|gb|ADL66764.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304341524|gb|EFM07434.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315195222|gb|EFU25610.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS00]
gi|329315430|gb|AEB89843.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus T0131]
Length = 239
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL Y+ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNYLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|293374960|ref|ZP_06621256.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325844326|ref|ZP_08168102.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
gi|292646437|gb|EFF64451.1| 16S rRNA methyltransferase GidB [Turicibacter sanguinis PC909]
gi|325489193|gb|EGC91575.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Turicibacter sp.
HGF1]
Length = 237
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSI 74
++ E +L ++ L ++W++K+NL + V + +++H DSL F +
Sbjct: 14 GIELTEEQKWQLHRYFELLVEWNEKMNLTGITEVNEVYLKHFYDSLLAFLMFKDIHKCES 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+GSG GFP + I ++ ++L++S K+ +FL +V+ +T + K + R +
Sbjct: 74 LCDVGSGAGFPALPVKIVYPHLK---MDLVDSLGKRVNFLNHVIAETKLQNIKAYHSRAE 130
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E A + + D+++ARA+A L+ L E P + +
Sbjct: 131 EYADKHRESFDIVTARAVARLNVLSELCVPLVKE 164
>gi|298695966|gb|ADI99188.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus ED133]
Length = 239
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + + +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHNVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|15925700|ref|NP_373234.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50]
gi|15928295|ref|NP_375828.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus N315]
gi|148269141|ref|YP_001248084.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH9]
gi|150395223|ref|YP_001317898.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus JH1]
gi|156981025|ref|YP_001443284.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu3]
gi|253316836|ref|ZP_04840049.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255007481|ref|ZP_05146082.2| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793534|ref|ZP_05642513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|258411160|ref|ZP_05681439.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|258420936|ref|ZP_05683870.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|258438575|ref|ZP_05689798.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|258443969|ref|ZP_05692307.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|258446215|ref|ZP_05694375.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|258449126|ref|ZP_05697232.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|258454396|ref|ZP_05702364.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|269204347|ref|YP_003283616.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282894275|ref|ZP_06302505.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|282927746|ref|ZP_06335360.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|295406860|ref|ZP_06816664.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|296275691|ref|ZP_06858198.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus MR1]
gi|297245895|ref|ZP_06929757.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|54037194|sp|P64240|RSMG_STAAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54041310|sp|P64239|RSMG_STAAM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224617|sp|A7X7A5|RSMG_STAA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040721|sp|A6U593|RSMG_STAA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040722|sp|A5IWD5|RSMG_STAA9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13702667|dbj|BAB43807.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus N315]
gi|14248485|dbj|BAB58872.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu50]
gi|147742210|gb|ABQ50508.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH9]
gi|149947675|gb|ABR53611.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus JH1]
gi|156723160|dbj|BAF79577.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus Mu3]
gi|257787506|gb|EEV25846.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9781]
gi|257840045|gb|EEV64510.1| ribosomal small subunit methyltransferase G [Staphylococcus aureus
A9763]
gi|257843126|gb|EEV67541.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A9719]
gi|257848134|gb|EEV72126.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A9299]
gi|257850853|gb|EEV74797.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A8115]
gi|257855041|gb|EEV77984.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6300]
gi|257857559|gb|EEV80454.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A6224]
gi|257863490|gb|EEV86250.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus A5937]
gi|262076637|gb|ACY12610.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus ED98]
gi|282590506|gb|EFB95584.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A10102]
gi|282763320|gb|EFC03450.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8117]
gi|285818373|gb|ADC38860.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus 04-02981]
gi|294968325|gb|EFG44350.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8819]
gi|297177260|gb|EFH36513.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus A8796]
gi|312831048|emb|CBX35890.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129539|gb|EFT85531.1| glucose-inhibited division protein B [Staphylococcus aureus subsp.
aureus CGS03]
gi|329725897|gb|EGG62376.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Staphylococcus
aureus subsp. aureus 21172]
Length = 239
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLIKK 164
>gi|290891984|ref|ZP_06554981.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
gi|290558578|gb|EFD92095.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
J2-071]
Length = 238
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|315026604|gb|EFT38536.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2137]
Length = 291
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 56 PEEFRQLLAEKGIELTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 115
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 116 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 172
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 173 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|254824832|ref|ZP_05229833.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|254851894|ref|ZP_05241242.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|254930924|ref|ZP_05264283.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|254992360|ref|ZP_05274550.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J2-064]
gi|255024123|ref|ZP_05296109.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J1-208]
gi|300763440|ref|ZP_07073438.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|258605190|gb|EEW17798.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
R2-503]
gi|293582471|gb|EFF94503.1| glucose-inhibited division protein B [Listeria monocytogenes
HPB2262]
gi|293594074|gb|EFG01835.1| ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes FSL J1-194]
gi|300515717|gb|EFK42766.1| glucose-inhibited division protein B [Listeria monocytogenes FSL
N1-017]
gi|328469139|gb|EGF40087.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 220]
gi|332313232|gb|EGJ26327.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes str. Scott A]
Length = 238
Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|169830195|ref|YP_001700353.1| methyltransferase gidB [Lysinibacillus sphaericus C3-41]
gi|238688171|sp|B1HPM1|RSMG_LYSSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168994683|gb|ACA42223.1| Methyltransferase gidB [Lysinibacillus sphaericus C3-41]
Length = 238
Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S + + + + ++ L ++W++K+NL + + +E +++H DS+ +
Sbjct: 13 KGIELSEKQITQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSISASFYFDFSKVIT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+G+G GFP I I + V +++S NK+ +FL ++ + R +
Sbjct: 73 VCDVGAGAGFPSIPIKICFPHLH---VTIVDSLNKRITFLNHLSDELQLENMNFVHARAE 129
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q DV++ARA+A L L E P Q
Sbjct: 130 EFGQNIKYREQYDVVTARAVARLSVLSELCVPLAKQ 165
>gi|46908989|ref|YP_015378.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes serotype 4b
str. F2365]
gi|55976451|sp|Q71VW1|RSMG_LISMF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46882262|gb|AAT05555.1| glucose-inhibited division protein B [Listeria monocytogenes
serotype 4b str. F2365]
Length = 238
Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I +E V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLE---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|315143570|gb|EFT87586.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX2141]
Length = 291
Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 56 PEEFRQLLAEKGIELTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 115
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 116 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLV 172
Query: 124 RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 173 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 219
>gi|229000271|ref|ZP_04159840.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
gi|229007796|ref|ZP_04165382.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228753473|gb|EEM02925.1| Methyltransferase GidB [Bacillus mycoides Rock1-4]
gi|228759603|gb|EEM08580.1| Methyltransferase GidB [Bacillus mycoides Rock3-17]
Length = 239
Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
N+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 14 GINLSPRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYNDFSKPFSI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ- 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 131 FGKKEGVRESFDIVMARAVARLSVLSELCLPLVK 164
>gi|226225352|ref|YP_002759459.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes Clip81459]
gi|259495498|sp|C1L0D6|RSMG_LISMC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225877814|emb|CAS06529.1| Ribosomal RNA small subunit methyltransferase G [Listeria
monocytogenes serotype 4b str. CLIP 80459]
Length = 238
Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|295707336|ref|YP_003600411.1| glucose inhibited division protein GidB [Bacillus megaterium DSM
319]
gi|294804995|gb|ADF42061.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium DSM 319]
Length = 238
Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SI 74
++S + L + E +Y + ++W++K+NL + + + + +H DS+ +
Sbjct: 13 KGISLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSISAAFFQDFTEIES 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I + V +++S K+ +FL ++V + R +
Sbjct: 73 MCDVGAGAGFPSIPIKICFPHLH---VTIVDSLQKRITFLTHLVNELELDNVTLCHDRAE 129
Query: 134 EAPQM---ITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D+++ARA+A + L E+ P + ++
Sbjct: 130 TFGKKETIRESFDLVTARAVARISVLNEFCLPLVKEQ 166
>gi|239637281|ref|ZP_04678268.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
gi|239597118|gb|EEQ79628.1| 16S rRNA methyltransferase GidB [Staphylococcus warneri L37603]
Length = 239
Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S E+ + +Y L ++W++K+NL S + + +++H DS+ +
Sbjct: 6 LSEKLKEHNIELSNTQKEQFQTYYQLLVEWNEKMNLTSITDEHEVYLKHFYDSITPSFYY 65
Query: 70 PYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++
Sbjct: 66 DFKGSLSICDVGAGAGFPSIPLKIIFPELK---VTIVDSLNKRIQFLNHLADALGLQDVS 122
Query: 127 VFACRIQEA--PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + D+++ARA+A L L E P +
Sbjct: 123 FVHDRAETFGKGDYRESYDIVTARAVARLTVLSELCLPLAKK 164
>gi|297585586|ref|YP_003701366.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
gi|297144043|gb|ADI00801.1| methyltransferase GidB [Bacillus selenitireducens MLS10]
Length = 237
Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + ++ E + + + +Y L + W+ ++NL + + ED +++H DS+
Sbjct: 2 TEQEFKEALRKKGIELTDEQMRQFDAYYHLLVDWNTRMNLTAITDKEDVYLKHFYDSITA 61
Query: 66 FQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + +D+G+G GFP I I +E V +I+S NK+ +FL + +
Sbjct: 62 CEFVDFSKATSVVDVGAGAGFPSIPIKIVFPHLE---VTIIDSLNKRITFLHALSDALSL 118
Query: 124 RGK-VFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
G R +EA + D+ +RA+A + L E P++
Sbjct: 119 SGVQAIHSRAEEAGRMSEYRDRFDLAISRAVARMPVLTELCMPFVK 164
>gi|291520337|emb|CBK75558.1| 16S rRNA m(7)G-527 methyltransferase [Butyrivibrio fibrisolvens
16/4]
Length = 226
Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWI 76
+ + + + +L+ FY L ++ +K +NL + + ++ I+H DSL + + P
Sbjct: 16 NFALIEKQISQLDLFYELLVEKNKVMNLTAITEFDEVIIKHFADSLSICTVLPDSVKTVC 75
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEA 135
DLG+G GFPGI +I S++ LI+S NK+ FL+ VV R +EA
Sbjct: 76 DLGTGAGFPGIPMAIAFPSLQ---FTLIDSLNKRIKFLQEVVDALGLNNVTLIHARAEEA 132
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWL 164
+ D++ +RA+A++ TL EY P +
Sbjct: 133 GRNKLYRENFDLVVSRAVANISTLSEYCLPLV 164
>gi|126651988|ref|ZP_01724180.1| glucose-inhibited division protein B [Bacillus sp. B14905]
gi|126591257|gb|EAZ85366.1| glucose-inhibited division protein B [Bacillus sp. B14905]
Length = 238
Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S + + + + ++ L ++W++K+NL + + +E +++H DS+ +
Sbjct: 13 KGIELSEKQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSISASFYFDFSKVIT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+G+G GFP I I + V +++S NK+ +FL ++ + R +
Sbjct: 73 VCDVGAGAGFPSIPIKICFPHLH---VTIVDSLNKRITFLNHLSDELQLENMNFVHARAE 129
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q DV++ARA+A L L E P Q
Sbjct: 130 EFGQNLKYREQYDVVTARAVARLSVLSELCVPLAKQ 165
>gi|217965994|ref|YP_002351672.1| methyltransferase GidB [Listeria monocytogenes HCC23]
gi|254766895|sp|B8DD12|RSMG_LISMH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217335264|gb|ACK41058.1| methyltransferase GidB [Listeria monocytogenes HCC23]
gi|307572390|emb|CAR85569.1| glucose-inhibited division protein B [Listeria monocytogenes L99]
Length = 238
Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAEIFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|154503058|ref|ZP_02040118.1| hypothetical protein RUMGNA_00880 [Ruminococcus gnavus ATCC 29149]
gi|153796299|gb|EDN78719.1| hypothetical protein RUMGNA_00880 [Ruminococcus gnavus ATCC 29149]
Length = 237
Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WI 76
++ E+ +Y L ++W+K +NL + ++ +H DSL + + + I
Sbjct: 14 IRLTERQKEQFHQYYELLVEWNKVMNLTGITEYDEVNEKHFVDSLAIVKTVDMNQVNSVI 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+G GFPG+ I ++ V L++S K+ +FL VV+K + R ++
Sbjct: 74 DIGTGAGFPGLPLKIAFPHLK---VVLLDSLKKRINFLDAVVEKLGLEDVETLHGRAEDF 130
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+A+L TL EY P++
Sbjct: 131 AKQTAYREQFDLCVSRAVANLSTLSEYCIPYIR 163
>gi|167770825|ref|ZP_02442878.1| hypothetical protein ANACOL_02178 [Anaerotruncus colihominis DSM
17241]
gi|167666865|gb|EDS10995.1| hypothetical protein ANACOL_02178 [Anaerotruncus colihominis DSM
17241]
Length = 237
Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ + L+ + + L ++W+ K+NL + + ++ I+H DSL +
Sbjct: 3 ERDMLKEYAAGFGVTLDTAQLDAFDRYAALLVEWNAKMNLTAITEPQEIVIKHFVDSLSL 62
Query: 66 FQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
L P + +D+G+G GFP + I + + L++S NK+ +FL+ + Q
Sbjct: 63 LSLCPIPQGARLVDVGTGAGFPSVPLKIARPDLH---LTLLDSLNKRITFLQELSQSLGQ 119
Query: 124 RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ R +EA + D+ +RA+A L L EY P++
Sbjct: 120 DNECIHARAEEAGRSPVYREKYDMAVSRAVARLYELSEYCLPFVR 164
>gi|320547408|ref|ZP_08041696.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
gi|320447953|gb|EFW88708.1| glucose inhibited division protein B [Streptococcus equinus ATCC
9812]
Length = 237
Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+++S ++ E ++ L ++W++KINL + + E +++H DS+ ++
Sbjct: 13 QGFDLSDTQKKQFERYFELLVEWNQKINLTAITDKEGVYLKHFYDSIAPVLQGKITNQEI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP I I I+ V +I+S NK+ +FL + ++ G F R
Sbjct: 73 RLLDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLAEELGLDGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q + D+++ARA+A L L E + P+L
Sbjct: 130 EDYGQDKVFRASYDIVTARAVARLQVLTELTIPFLK 165
>gi|256618560|ref|ZP_05475406.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|257087803|ref|ZP_05582164.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300861419|ref|ZP_07107503.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
gi|256598087|gb|EEU17263.1| glucose inhibited division protein [Enterococcus faecalis ATCC
4200]
gi|256995833|gb|EEU83135.1| glucose inhibited division protein [Enterococcus faecalis D6]
gi|300848880|gb|EFK76633.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TUSoD Ef11]
Length = 238
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 3 PEEFRQLLAEKGIELTNQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 63 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 119
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P + ++
Sbjct: 120 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKE 166
>gi|283471924|emb|CAQ51135.1| methyltransferase GidB [Staphylococcus aureus subsp. aureus ST398]
Length = 239
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ + + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|297531685|ref|YP_003672960.1| methyltransferase GidB [Geobacillus sp. C56-T3]
gi|297254937|gb|ADI28383.1| methyltransferase GidB [Geobacillus sp. C56-T3]
Length = 238
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+ ++L +L +S L + E +Y L ++W++K+NL + + +++H
Sbjct: 1 MEATQFQTMLEERGIL----LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFF 56
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS+ + + P D+GSG GFP + I + V++++S K+ FL +++
Sbjct: 57 DSVSPAFYYDFSAPLALCDVGSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLI 113
Query: 119 QKTAA-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++ R + M + DV++ARA+A + L+E P +
Sbjct: 114 TELGLADVALYHERAETFARQKGMRESFDVVTARAVARMPVLVELCLPLVK 164
>gi|116874155|ref|YP_850936.1| glucose-inhibited division protein B [Listeria welshimeri serovar
6b str. SLCC5334]
gi|123461489|sp|A0AMC5|RSMG_LISW6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116743033|emb|CAK22157.1| glucose-inhibited division protein B [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 238
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFKTALAEKGIELSATQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ S D+G+G GFP I I ++ V++++S K+ +FL + +K
Sbjct: 62 TFYVDFTSFDSICDVGAGAGFPSIPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLAELCIPLVKK 165
>gi|283797200|ref|ZP_06346353.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
gi|291075161|gb|EFE12525.1| 16S rRNA methyltransferase GidB [Clostridium sp. M62/1]
Length = 242
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----YPS 73
++ + +E+ +Y L +W++ +NL + + + + +H DSL + +
Sbjct: 17 GVTLTEKQMEQFFRYYELLNEWNQVMNLTAITEMSEVVTKHFVDSLALKRAVDGLETEAF 76
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
D+G+G GFPGI I + V L++S NK+ FL V+ + G R
Sbjct: 77 SVADVGTGAGFPGIPLKIAFPGLR---VTLLDSLNKRVKFLNTVISELGLEGITAVHGRA 133
Query: 133 QEAPQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
++ + T D+ +RA+A+L TL EY P +
Sbjct: 134 EDFGRNRVSRETFDICVSRAVANLSTLSEYCMPLVKP 170
>gi|282902627|ref|ZP_06310520.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|282918064|ref|ZP_06325814.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282921286|ref|ZP_06329004.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|283767786|ref|ZP_06340701.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
gi|282315701|gb|EFB46085.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C427]
gi|282318349|gb|EFB48709.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus D139]
gi|282597086|gb|EFC02045.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus C160]
gi|283461665|gb|EFC08749.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus H19]
Length = 239
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ + + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNHLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|225016768|ref|ZP_03705960.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
gi|224950436|gb|EEG31645.1| hypothetical protein CLOSTMETH_00680 [Clostridium methylpentosum
DSM 5476]
Length = 236
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L++ ++++ L++ + + L ++W++KINL S + ++ I+H DSL +
Sbjct: 3 NKDFLQSALAKYEIDITQMQLDQFDLYAKLLVEWNEKINLTSITDPDEIVIKHFVDSLLL 62
Query: 66 FQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P + ID+G+G GFP +I ++ + ++S NK+ FL+ V +
Sbjct: 63 LRAANLPQGASLIDVGTGAGFPSTPLAILRGDLQ---ITQLDSLNKRILFLQEVSDQLGL 119
Query: 124 RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K R +E + + D +ARA+A+L TL EY P++
Sbjct: 120 PIKTVHIRAEEGGKSAEFREKYDYATARAVANLQTLSEYCIPFVK 164
>gi|224498352|ref|ZP_03666701.1| glucose-inhibited division protein B [Listeria monocytogenes
Finland 1988]
Length = 238
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFESICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVYFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|313635557|gb|EFS01770.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL N1-067]
Length = 238
Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I +E V++++S K+ +FL + +K A F R +
Sbjct: 73 ICDVGAGAGFPSIPIKICFPHLE---VSIVDSLKKRMTFLDALAEKLALTNVHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 TFGQNKAHRERYDLVTARAVARMSVLSELCLPLVKK 165
>gi|295090266|emb|CBK76373.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium cf.
saccharolyticum K10]
Length = 242
Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----YPS 73
++ + +E+ +Y L +W++ +NL + + + + +H DSL + +
Sbjct: 17 GVTLTEKQMEQFFRYYELLNEWNQVMNLTAITEMSEVVTKHFVDSLALKRAVDGLETEAF 76
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
D+G+G GFPGI I + V L++S NK+ FL V+ + G R
Sbjct: 77 SVADVGTGAGFPGIPLKIAFPGLR---VTLLDSLNKRVKFLNTVISELGLEGITAVHGRA 133
Query: 133 QEAPQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
++ + T D+ +RA+A+L TL EY P +
Sbjct: 134 EDFGRNRVSRETFDICVSRAVANLSTLSEYCMPLVKP 170
>gi|16801993|ref|NP_472261.1| 16S rRNA methyltransferase GidB [Listeria innocua Clip11262]
gi|20177891|sp|Q926V6|RSMG_LISIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|16415475|emb|CAC98159.1| GidB protein [Listeria innocua Clip11262]
Length = 238
Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S + +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQMALAEKGIELSDDQMKQFHDYFKMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|308071637|ref|YP_003873242.1| methyltransferase gidB (glucose inhibited division protein B)
[Paenibacillus polymyxa E681]
gi|305860916|gb|ADM72704.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Paenibacillus polymyxa E681]
Length = 240
Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
++ LE+ E +Y + ++W++K+NL + + + +H DSL + P D+
Sbjct: 19 INDSQLEQFETYYRVLVEWNEKMNLTGITERDAVYTKHFYDSLSLAFYVPLNDVGSLADI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
GSG GFPGI I I+ + +++S NK+ FL +VV++ ++ R +E
Sbjct: 79 GSGAGFPGIPLKICFPQIQ---LTIVDSLNKRIQFLAHVVEQLGLENVELIHSRAEELGR 135
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + D+++ARA+A L L E+ P++ +
Sbjct: 136 KPGYRDSYDLVTARAVARLAVLNEFCLPFVRE 167
>gi|299541772|ref|ZP_07052095.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
gi|298725510|gb|EFI66151.1| methyltransferase gidB [Lysinibacillus fusiformis ZC1]
Length = 238
Score = 189 bits (482), Expect = 7e-47, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S + + + ++ L ++W++K+NL + + +E +++H DS+ +
Sbjct: 13 KGIELSDIQIAQFKKYFELLVEWNEKMNLTAITDLEGVYLKHFFDSISPSFYFDFSKVIT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+G+G GFP I I ++ V +++S NK+ +FL ++ + R +
Sbjct: 73 VCDVGAGAGFPSIPIKICFPHLQ---VTIVDSLNKRITFLNHLSDELQLENMHFVHARAE 129
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
E Q DV++ARA+A L L E P Q+
Sbjct: 130 EFGQNLKYREQFDVVTARAVARLSVLAELCVPLAKQE 166
>gi|152977681|ref|YP_001377198.1| glucose-inhibited division protein B [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|189039481|sp|A7GVP5|RSMG_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152026433|gb|ABS24203.1| methyltransferase GidB [Bacillus cytotoxicus NVH 391-98]
Length = 239
Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIW 75
++S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + P
Sbjct: 14 GISLSPRQLEQFEMYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSNPLSI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ- 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 131 FGKKEHVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|282912270|ref|ZP_06320066.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282323966|gb|EFB54282.1| 16S rRNA methyltransferase GidB [Staphylococcus aureus subsp.
aureus WBG10049]
gi|312436863|gb|ADQ75934.1| glucose inhibited division protein B [Staphylococcus aureus subsp.
aureus TCH60]
Length = 239
Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK+ FL Y+ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKRIQFLNYLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV+ ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVIARAVARLSVLSELCLPLVKK 164
>gi|255659829|ref|ZP_05405238.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
gi|260847904|gb|EEX67911.1| 16S rRNA methyltransferase GidB [Mitsuokella multacida DSM 20544]
Length = 237
Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ +S L + +Y L ++W++K+NL + + + ++H+ DSL +
Sbjct: 3 RDEMKKAAEDFGLTLSENQLAQFTRYYELLVEWNEKMNLTAITEEHEVAVKHMVDSLSAY 62
Query: 67 Q--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
L ID+G+G GFPG+ I + + L++S NK+ +FL+ VV +
Sbjct: 63 DPALFDGEISIIDVGTGAGFPGLPLKIFCPQVH---LTLMDSLNKRVNFLQTVVDELGLE 119
Query: 124 RGKVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E + D+ +RA+A L L EY P++ +
Sbjct: 120 DVDCVHARAEEGARMKKYREQYDLAVSRAVARLPILCEYCLPFVKR 165
>gi|163791212|ref|ZP_02185629.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
gi|159873543|gb|EDP67630.1| glucose-inhibited division protein B [Carnobacterium sp. AT7]
Length = 238
Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + V+ + +++ + + L +W++KINL + + E+ +++H DS+
Sbjct: 2 NPEEFKNALEDKGITVTEKQMKQFDQYLKLLQEWNEKINLTAITEKEEVYLKHFYDSITA 61
Query: 66 ---FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+G+G GFP I I +E V +++S NK+ FL + +
Sbjct: 62 GLYVNFNNGVQSLCDVGAGAGFPSIPLKIIFPQLE---VTIVDSLNKRIQFLTLLAKTLE 118
Query: 123 ARGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G F R + + Q + D ++ARA+A + L E P + +
Sbjct: 119 LDGVHFYHDRAETFGQNKQFRESFDFVTARAVARMSVLAELCLPLVKK 166
>gi|56422027|ref|YP_149345.1| 16S rRNA methyltransferase GidB [Geobacillus kaustophilus HTA426]
gi|81557669|sp|Q5KU59|RSMG_GEOKA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56381869|dbj|BAD77777.1| glucose-inhibited division protein [Geobacillus kaustophilus
HTA426]
Length = 238
Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+ ++L +L +S L + E +Y L ++W++K+NL + + +++H
Sbjct: 1 MEATQFQTMLEERGIL----LSSRALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFF 56
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS+ + + P D+GSG GFP + I + V++++S K+ FL +++
Sbjct: 57 DSVSPAFYYDFSAPLALCDVGSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLI 113
Query: 119 QKTAA-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++ R + M + DV++ARA+A + L+E P +
Sbjct: 114 TELGLADVALYHERAETFARQKGMRESFDVVTARAVARMPVLVELCLPLVK 164
>gi|261410103|ref|YP_003246344.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
gi|261286566|gb|ACX68537.1| methyltransferase GidB [Paenibacillus sp. Y412MC10]
Length = 240
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ + + L + E +Y + ++W++K+NL + E + +H DS+ + I
Sbjct: 15 HGITIDEKQLHQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSITLAFYVDMNKIGN 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+GSG GFPGI I ++ + +++S NK+ +FL++V G ++ R +
Sbjct: 75 LADIGSGAGFPGIPLKICFPHLK---LTIVDSLNKRITFLKHVADTLGLSGIELIHGRAE 131
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
E + D+++ARA+A + L E+ P+
Sbjct: 132 EVARKHGYRDGFDLVTARAVARMAVLNEFCLPFTK 166
>gi|47093263|ref|ZP_00231034.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|47018337|gb|EAL09099.1| glucose-inhibited division protein B [Listeria monocytogenes str.
4b H7858]
gi|328468275|gb|EGF39281.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes 1816]
Length = 238
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AVYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 165
>gi|228994201|ref|ZP_04154101.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
gi|228765653|gb|EEM14307.1| Methyltransferase GidB [Bacillus pseudomycoides DSM 12442]
Length = 239
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
N+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 14 GINLSPRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYNDFSKPFSI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ- 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 131 FGKKEGVRESFDIVMARAVARLSVLSELCLPLVK 164
>gi|229087969|ref|ZP_04220076.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
gi|228695338|gb|EEL48216.1| Methyltransferase GidB [Bacillus cereus Rock3-44]
Length = 239
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 14 GITLSPRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFSI 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQE 134
D+G+G GFP I I ++ + +++S K+ +FL ++ QK F R +
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLK---ITIVDSLQKRINFLNHLAQKLELSDVAFCHDRAET 130
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 131 FGKKDGVRESFDIVMARAVARLSVLSELCLPLVK 164
>gi|224541704|ref|ZP_03682243.1| hypothetical protein CATMIT_00876 [Catenibacterium mitsuokai DSM
15897]
gi|224525373|gb|EEF94478.1| hypothetical protein CATMIT_00876 [Catenibacterium mitsuokai DSM
15897]
Length = 234
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIW 75
+S + +E+ E +Y + ++W++K+NL + + E +++H DSL + P+
Sbjct: 13 KGIVLSEKQIEQFEKYYEILVEWNEKMNLTAITDREGVYLKHFYDSLTIAFDFPFSNQTI 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+G+G GFP + I + V +++S NK+ +FL ++ ++ + A R ++
Sbjct: 73 CDVGAGAGFPSVPLKIVYPELN---VTIVDSLNKRITFLNHLFKELELDHIQAVASRAED 129
Query: 135 A-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D++ ARA+A L+ L E P + +
Sbjct: 130 FCKDHRESFDIVMARAVARLNILDELCLPLVKK 162
>gi|294501985|ref|YP_003565685.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
gi|294351922|gb|ADE72251.1| methyltransferase (glucose inhibited division protein) GidB
[Bacillus megaterium QM B1551]
Length = 238
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SI 74
++S + L + E +Y + ++W++K+NL + + + + +H DS+ +
Sbjct: 13 KGISLSSKQLNQFEKYYQVLVEWNEKMNLTAITDHGEVYEKHFYDSISAAFFQDFTEIES 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I + V +++S K+ +FL ++V + R +
Sbjct: 73 MCDVGAGAGFPSIPIKICFPHLH---VTIVDSLQKRITFLMHLVNELELDNVTLCHDRAE 129
Query: 134 EAPQM---ITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D+++ARA+A + L E+ P + ++
Sbjct: 130 TFGKKETIRESFDLVTARAVARISVLNEFCLPLVKER 166
>gi|226315525|ref|YP_002775421.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
gi|254766884|sp|C0ZA63|RSMG_BREBN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226098475|dbj|BAH46917.1| ribosomal RNA small subunit methyltransferase G [Brevibacillus
brevis NBRC 100599]
Length = 238
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+++ E+ ++F+ L ++W++K+NL + + +H DS+ P+ +
Sbjct: 13 QGISLTDRQKEQFDHFFRLLVEWNEKMNLTGITEEGQVYNKHFYDSITPAFYFPFDQVQS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQ 133
+D+G G GFP I I ++ + +I+S NK+ SFL++V ++ R +
Sbjct: 73 VVDIGGGAGFPSIPLKICFPHLK---MTIIDSLNKRMSFLQHVAKELGLENVNPVHGRAE 129
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D++ ARA+A L+ L E+ P+
Sbjct: 130 DRGQEAMYREKFDLVVARAVARLNLLSEFCLPFAK 164
>gi|288906021|ref|YP_003431243.1| Methyltransferase gidB (glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|306832061|ref|ZP_07465215.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732747|emb|CBI14321.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Streptococcus gallolyticus UCN34]
gi|304425500|gb|EFM28618.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 237
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ ++ E ++ L ++W++KINL + + E +++H DS+ ++
Sbjct: 13 QGFELTDTQKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVLQGKITNQAI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP I I I+ V +I+S NK+ +FL + + +G F R
Sbjct: 73 RLLDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLKGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q + D+++ARA+A L L E + P+L
Sbjct: 130 EDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLK 165
>gi|260584386|ref|ZP_05852133.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
gi|260157904|gb|EEW92973.1| 16S rRNA methyltransferase GidB [Granulicatella elegans ATCC
700633]
Length = 237
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
+ ++ ++ ++ L ++W++K+NL + + E +++H DSL + F
Sbjct: 14 HGITLTDVQKKQFHQYFQLLVEWNEKMNLTAITDEEGVYLKHFYDSLALGFHHELSNQTL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ- 133
D+G+G GFP I I ++ V +++S NK+ +FL +V+ + F R +
Sbjct: 74 CDVGAGAGFPSIPLKIVFPDLK---VTIVDSLNKRITFLNTLVETLGLTDVQCFHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + DV++ARA+A L L E+ P + ++
Sbjct: 131 FGQNKNFRASYDVVTARAVAKLSVLSEFCMPLVKKQ 166
>gi|138897065|ref|YP_001127518.1| 16S rRNA methyltransferase GidB [Geobacillus thermodenitrificans
NG80-2]
gi|196249886|ref|ZP_03148582.1| methyltransferase GidB [Geobacillus sp. G11MC16]
gi|166224591|sp|A4ITW9|RSMG_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134268578|gb|ABO68773.1| Glucose inhibited division protein B [Geobacillus
thermodenitrificans NG80-2]
gi|196210762|gb|EDY05525.1| methyltransferase GidB [Geobacillus sp. G11MC16]
Length = 238
Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
++S + L + E +Y L ++W++K+NL + + +++H DS+ + +
Sbjct: 14 GISLSSQALAQFERYYELLVEWNEKMNLTAITDKPGVYVKHFFDSVSPAFYYDFSEPFSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQ- 133
D+G+G GFP I I + V++++S K+ FL+++V + + + R +
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLR---VSIVDSLQKRIRFLQHLVGELGLKDIALYHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
M + DV++ARA+A + L E P
Sbjct: 131 FARQKGMRESFDVVTARAVARMPVLAELCLPLTK 164
>gi|322373911|ref|ZP_08048446.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
gi|321277283|gb|EFX54353.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C150]
Length = 237
Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+N+S++ ++ + ++ L ++W++KINL + + D +++H DSL +
Sbjct: 13 EGFNLSQQQKDQFQRYFELLVEWNEKINLTAITDKNDVYLKHFYDSLAPVLQGHIKNQDI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I +E V +I+S NK+ +FL + + G F R
Sbjct: 73 RLLDIGAGAGFPSLPMKILCPKLE---VTIIDSLNKRINFLNLLADELQLSGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A L L E + P+L
Sbjct: 130 EDFGQDKSFRAQFDVVTARAVARLQILSELTIPFLK 165
>gi|253581095|ref|ZP_04858355.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847631|gb|EES75601.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 236
Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ L +S++ + FY ++ +K +NL + E+ +H DSL +
Sbjct: 2 TTLENGCRELGIELSQKQKNQFIQFYEFLVEKNKVMNLTGITEFEEVLTKHFLDSLACVK 61
Query: 68 LHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+G+G GFPG+ I +E L++S K+ +FL + G
Sbjct: 62 AIDMTKVKTIMDIGTGAGFPGVPLKIAFPHLEA---CLLDSLKKRVNFLEESFELLGLEG 118
Query: 126 -KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K R +E + D+ +RA+++L TL EY P++
Sbjct: 119 IKAIHGRAEEYAKNKEYREKYDLCVSRAVSNLATLSEYCLPYVK 162
>gi|229542322|ref|ZP_04431382.1| methyltransferase GidB [Bacillus coagulans 36D1]
gi|229326742|gb|EEN92417.1| methyltransferase GidB [Bacillus coagulans 36D1]
Length = 238
Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S E ++ E +Y + W+ K+NL + + + +++H DSL +
Sbjct: 13 KGIPLSEEQKQQFETYYKWLVDWNNKMNLTAITEKGEVYLKHFYDSLTAAFFTDFNGPLH 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+G+G GFPGI I + +++++S K+ +FL ++ + + +F R +
Sbjct: 73 VCDVGAGAGFPGIPLKICFPELR---LSIVDSLQKRITFLGHLTEALGLKEVSLFHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ P+ DV+ ARA+A + L E P +
Sbjct: 130 TFAKKPEHREQYDVVMARAVARMSVLSELCLPLVKP 165
>gi|319651093|ref|ZP_08005227.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
gi|317397263|gb|EFV77967.1| glucose-inhibited division protein B [Bacillus sp. 2_A_57_CT2]
Length = 238
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S + L++ + +Y ++W++K+NL + + ED +++H DS+ +
Sbjct: 13 KGIALSPQQLQQYDTYYSTLVEWNEKMNLTAITEKEDVYLKHFYDSISAAFYFDFNQPLK 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+G+G GFP I I + + +++S NK+ FL ++ +K + R +
Sbjct: 73 VCDVGAGAGFPSIPIKIAFPGLH---ITIVDSLNKRIGFLEHLAKKLELDNVRFIHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + + DV++ARA+A L L E P
Sbjct: 130 TFGQNKEYRESFDVVTARAVARLSVLSELCLPL 162
>gi|228476624|ref|ZP_04061306.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
gi|228251819|gb|EEK10884.1| 16S rRNA methyltransferase GidB [Streptococcus salivarius SK126]
Length = 237
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL +
Sbjct: 14 GFDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQGHIKNQTIR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL + + G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKILCPDLD---VTIIDSLNKRINFLNLLADELELSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|229153641|ref|ZP_04281817.1| Methyltransferase GidB [Bacillus cereus m1550]
gi|228629827|gb|EEK86480.1| Methyltransferase GidB [Bacillus cereus m1550]
Length = 239
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSI 74
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + + PS
Sbjct: 13 KGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPSS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|229035140|ref|ZP_04189086.1| Methyltransferase GidB [Bacillus cereus AH1271]
gi|228728206|gb|EEL79236.1| Methyltransferase GidB [Bacillus cereus AH1271]
Length = 239
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|309777476|ref|ZP_07672430.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
gi|308914716|gb|EFP60502.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
3_1_53]
Length = 236
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ + L++ E + + ++W++K+NL + + +++ + +H DS+ +
Sbjct: 17 HGIQLHERQLQQFEEYASMLIEWNQKMNLTAITDLDEIYEKHFLDSILPSFDWKLQGSFC 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE- 134
D+G+G GFPGI I +E + ++E+ K+ +FL + +K G R ++
Sbjct: 77 DVGAGAGFPGIPLKIIYPDLE---LTIVETLGKRITFLNALCEKLKLDGVACVHARAEDY 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A + + D++SARA+A+L L E P + Q
Sbjct: 134 AKEHRESFDIVSARAVANLPLLSELCIPLVKQ 165
>gi|254520704|ref|ZP_05132760.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
gi|226914453|gb|EEH99654.1| ribosomal RNA small subunit methyltransferase G [Clostridium sp.
7_2_43FAA]
Length = 239
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+++ L +S E+ + L +W++KINL + + E+ +H D ++ F+
Sbjct: 6 LMKEASLEVGMELSEHQYEQFIKYMRLLQEWNEKINLTAITEDEEVIKKHFIDCIKAFKS 65
Query: 68 -LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
ID+G+G GFPG+ +I +++ + L++S NK+ +FL V+ +
Sbjct: 66 DAIKNAKTIIDVGTGAGFPGLPIAIMNPNVQ---ITLLDSLNKRINFLNTVINNIGLKNV 122
Query: 127 V-FACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P++ DV ++RA+A++ L E+ P++
Sbjct: 123 ITIHSRAEDGARKPELREKFDVATSRAVANMAVLSEFCMPYIK 165
>gi|225575642|ref|ZP_03784252.1| hypothetical protein RUMHYD_03735 [Blautia hydrogenotrophica DSM
10507]
gi|225037152|gb|EEG47398.1| hypothetical protein RUMHYD_03735 [Blautia hydrogenotrophica DSM
10507]
Length = 239
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++L + + E+ +Y L ++W+K +NL + E+ +H DSL V +
Sbjct: 5 TVLDRGCAELGIQLEQRQREQFVQYYELLIEWNKVMNLTGITEFEEVLQKHFVDSLSVKK 64
Query: 68 LHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ S ID+G+G GFPGI I ++ + L++S K+ FL V+ + +
Sbjct: 65 VVDLTKISRVIDVGTGAGFPGIPLKIVFPELK---ITLLDSLQKRIKFLNEVIGRLCLKD 121
Query: 126 -KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + D+ +RA+A+L +L EY P++
Sbjct: 122 IEAIHGRAEEYARRKEYREQYDLCVSRAVANLASLSEYCLPYVK 165
>gi|229164433|ref|ZP_04292361.1| Methyltransferase GidB [Bacillus cereus R309803]
gi|228619038|gb|EEK75936.1| Methyltransferase GidB [Bacillus cereus R309803]
Length = 239
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|15616622|ref|NP_244928.1| 16S rRNA methyltransferase GidB [Bacillus halodurans C-125]
gi|11132401|sp|Q9K5M8|RSMG_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|10176685|dbj|BAB07779.1| glucose-inhibited division protein [Bacillus halodurans C-125]
Length = 238
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
R +++S+ L++ E++Y ++W++K+NL + + E +++H DSL
Sbjct: 6 FRQRLEERGFSLSQAQLDQFEHYYHTLVEWNEKMNLTAITDKEGVYLKHFYDSLTAAFYV 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +D+G+G GFP I I + V +++S K+ FL ++ + +G
Sbjct: 66 DFTKVATVVDVGAGAGFPSIPLKIVFPELR---VTIVDSLKKRIGFLEHLSETLGLKGTA 122
Query: 128 F-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
F R + + + D++ ARA+A L L E P
Sbjct: 123 FYHDRAETFAQKKEHREQYDLVLARAVARLPVLSELCLPLAK 164
>gi|209558836|ref|YP_002285308.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes NZ131]
gi|238058259|sp|B5XJV1|RSMG_STRPZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209540037|gb|ACI60613.1| Methyltransferase gidB [Streptococcus pyogenes NZ131]
Length = 237
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|21909776|ref|NP_664044.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS315]
gi|28896531|ref|NP_802881.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes SSI-1]
gi|71902936|ref|YP_279739.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS6180]
gi|25090462|sp|Q8K8K3|RSMG_STRP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123640486|sp|Q48V72|RSMG_STRPM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21903961|gb|AAM78847.1| putative glucose inhibited division protein B [Streptococcus
pyogenes MGAS315]
gi|28811785|dbj|BAC64714.1| putative glucose-inhibited division protein [Streptococcus pyogenes
SSI-1]
gi|71802031|gb|AAX71384.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS6180]
Length = 237
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|329768827|ref|ZP_08260256.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
gi|328838220|gb|EGF87833.1| hypothetical protein HMPREF0433_00020 [Gemella sanguinis M325]
Length = 238
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
+S + + + +Y L ++W++KINL + + E+F+ +H DS+ + Y ++
Sbjct: 16 GIELSEKQKNQYQRYYELVVEWNQKINLTAITEEEEFYSKHFYDSISLAFFKDYSNVDNI 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+GSG GFP I I ++E V +++S NK+ FL + + R +E
Sbjct: 76 CDVGSGAGFPSIPLKILYPNLE---VTIVDSLNKRIKFLNLLKDELELTNCNFIHARAEE 132
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q ++++ARA+A L+ L E P + +
Sbjct: 133 IGQNRDYREKFEIVTARAVARLNVLSELCLPLVRK 167
>gi|295402129|ref|ZP_06812088.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|312112750|ref|YP_003991066.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
gi|294975812|gb|EFG51431.1| methyltransferase GidB [Geobacillus thermoglucosidasius C56-YS93]
gi|311217851|gb|ADP76455.1| methyltransferase GidB [Geobacillus sp. Y4.1MC1]
Length = 238
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
+S + L + E +Y L ++W++K+NL + + +++H DSL + +
Sbjct: 14 GVPLSSQALAQFERYYELLIEWNEKMNLTAITDKPSVYLKHFFDSLSPAFYYDFSQSLSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ- 133
D+G+G GFP I I ++ +V +S K+ FL ++ + + + R +
Sbjct: 74 CDVGAGAGFPSIPLKICFPHLKLSVV---DSLQKRIHFLEHLAAELGLADVEFYHDRAET 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + DV+ ARA+A + L E P +
Sbjct: 131 FGRNKEFRESFDVVIARAVARMPVLSELCLPLVK 164
>gi|257081315|ref|ZP_05575676.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
gi|256989345|gb|EEU76647.1| glucose inhibited division protein [Enterococcus faecalis E1Sol]
Length = 238
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
R ++ + + + + ++ L ++W++K+NL + + ++ +++H DS+ +
Sbjct: 3 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVSLA 62
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ D+G+G GFP I I S+ V +++S NK+ +FL +V +
Sbjct: 63 FFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN---VTIVDSLNKRITFLTELVNQLGLA 119
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R + + + D ++ARA+A L+ L E P ++
Sbjct: 120 NVSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLAKKE 166
>gi|154688205|ref|YP_001423366.1| 16S rRNA methyltransferase GidB [Bacillus amyloliquefaciens FZB42]
gi|166224573|sp|A7ZAV9|RSMG_BACA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154354056|gb|ABS76135.1| GidB [Bacillus amyloliquefaciens FZB42]
Length = 239
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
++S LE+ E +Y + ++W++K+NL S + +D +++H DS+ +
Sbjct: 13 KGISLSDRQLEQFELYYRMLVEWNEKMNLTSITEKKDVYLKHFYDSITAAFYIDFEKVTT 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+G+G GFP + I + V +++S NK+ +FL + R +
Sbjct: 73 LCDVGAGAGFPSLPIKICFPHLH---VTIVDSLNKRITFLETLSDALQLEHTSFVHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + D+++ARA+A L L E P +
Sbjct: 130 TFGQRKDVRESFDLVTARAVARLSVLSELCLPLAKK 165
>gi|313901364|ref|ZP_07834850.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
gi|312953852|gb|EFR35534.1| 16S rRNA methyltransferase GidB [Clostridium sp. HGF2]
Length = 236
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ L + E + + ++W++KINL + + ++ + +H DS+ + D+G+
Sbjct: 21 LQEHQLRQFEEYASMLIEWNQKINLTAITDPDEIYEKHFLDSILPSFDMSIQGSFCDVGA 80
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQ-EAPQM 138
G GFPGI I +E + ++E+ K+ +FL + K +G R + A
Sbjct: 81 GAGFPGIPLKIIYPELE---LTIVETLGKRITFLNALCDKLQLKGVTCVHERAEVYAKDH 137
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D++SARA+A+L L E P + ++
Sbjct: 138 RESFDIVSARAVANLPLLSELCIPLVKKQ 166
>gi|266620966|ref|ZP_06113901.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
gi|288867388|gb|EFC99686.1| 16S rRNA methyltransferase GidB [Clostridium hathewayi DSM 13479]
Length = 243
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 11 RANYLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R + LN +++ E + + +Y L +W+K +NL + + ++ +H DSL + +
Sbjct: 8 RLSRELNQFSIILENSQINQFYQYYELLDEWNKVMNLTAITDQKEVITKHFVDSLALVKA 67
Query: 69 HPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
S ID+G+G GFPGI I ++ + L++S NK+ FL V+++ +
Sbjct: 68 MGEISTKEYKIIDIGTGAGFPGIPLKIAFPQLK---ITLMDSLNKRIKFLNEVIEQLGLK 124
Query: 125 -GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ D+ +RA+A+L TL EY P++
Sbjct: 125 EITAVHSRAEDLGRDKDYREQYDLSVSRAVANLSTLSEYCMPFVKP 170
>gi|167462790|ref|ZP_02327879.1| glucose-inhibited division protein B [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381366|ref|ZP_08055369.1| 16S rRNA methyltransferase GidB-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154942|gb|EFX47213.1| 16S rRNA methyltransferase GidB-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 242
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+VS + L++ EY+Y ++W++K+NL + + E +++H DSL +
Sbjct: 15 QGISVSDQQLQQFEYYYQELVEWNEKMNLTAITGREQVYVKHFYDSLSLSFFKDMNKVER 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ 133
D+GSG GFPGI I ++ + +++S NK+ FLR ++ K + + R +
Sbjct: 75 MADIGSGAGFPGIPLKIMFPHLQ---LTIVDSLNKRILFLRQLIDKLGLKEVECVHSRAE 131
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+A D+++ARA+A L L E P+
Sbjct: 132 DAGRLESHRDRYDLVTARAVARLAVLNELCLPFTKP 167
>gi|94991792|ref|YP_599891.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS2096]
gi|166224618|sp|Q1JDG1|RSMG_STRPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94545300|gb|ABF35347.1| Methyltransferase gidB [Streptococcus pyogenes MGAS2096]
Length = 237
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQAFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|304405896|ref|ZP_07387554.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
gi|304345139|gb|EFM10975.1| methyltransferase GidB [Paenibacillus curdlanolyticus YK9]
Length = 240
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
++ E L++ E ++ + ++W++K+NL + E + +H DS+ + ++
Sbjct: 15 KGITLTAEQLDQFEAYFRILVEWNEKMNLTGITEREAVYEKHFYDSVALSFYVDMKNVRH 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+GSG GFP + I ++ + +++S NK+ SFL++VV + R +
Sbjct: 75 IADIGSGAGFPSLPIKICFPHLK---ITIVDSLNKRISFLQHVVNELGLSDVSCVHGRAE 131
Query: 134 E---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ P+ D+++ARA+A L+ L E+ P++ +
Sbjct: 132 DIARLPEHRDHYDLVTARAVAKLNVLNEFCLPFVRK 167
>gi|257429505|ref|ZP_05605892.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
gi|257279986|gb|EEV10573.1| ribosomal RNA small subunit methyltransferase G [Staphylococcus
aureus subsp. aureus 68-397]
Length = 239
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ ++ + +Y L ++W++K+NL S + D +++H DS+
Sbjct: 6 LAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYF 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ D+G+G GFP I I ++ V +++S NK FL Y+ +
Sbjct: 66 DFNQPISICDVGAGAGFPSIPLKIMFPQLK---VTIVDSLNKCIQFLNYLASELQLQDVS 122
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + + DV++ARA+A L L E P + +
Sbjct: 123 FIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKK 164
>gi|171780281|ref|ZP_02921185.1| hypothetical protein STRINF_02069 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281629|gb|EDT47064.1| hypothetical protein STRINF_02069 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 237
Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++++ ++ E ++ L ++W++KINL + + E +++H DS+ ++
Sbjct: 13 QGFDLTDTQKKQFERYFELLVEWNQKINLTAITDKEGVYLKHFYDSIAPVLQGKITNQDV 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP I I +I+ V +I+S NK+ +FL + + G F R
Sbjct: 73 RLLDIGAGAGFPSIPIKILCPAID---VTIIDSLNKRINFLNRLADELGLDGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q + D+++ARA+A L L E + P+L
Sbjct: 130 EDYGQDKAFRASYDIVTARAVARLQVLTELTIPFLK 165
>gi|325978989|ref|YP_004288705.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178917|emb|CBZ48961.1| 16S rRNA methyltransferase GidB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 244
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ ++ E ++ L ++W++KINL + + E +++H DS+ ++
Sbjct: 20 QGFELTDTQKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVLQGKITNQAI 79
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP I I I+ V +I+S NK+ +FL + + G F R
Sbjct: 80 RLLDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLEGVHFYHGRA 136
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q + D+++ARA+A L L E + P+L
Sbjct: 137 EDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLK 172
>gi|313640182|gb|EFS04772.1| 16S rRNA methyltransferase GidB [Listeria seeligeri FSL S4-171]
Length = 238
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S L++ ++ + ++W++K+NL + + ++ +++H DS+ +
Sbjct: 13 KGIELSEVQLKQFHDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISAAFYVDFNDFHS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I +E V++++ K+ +FL + +K A F R +
Sbjct: 73 ICDVGAGAGFPSIPIKICFPHLE---VSIVDXXXKRMTFLDALAEKLALTNVHFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A + L E P + +
Sbjct: 130 TFGQNKAHREKYDLVTARAVARMSVLSELCLPLVKK 165
>gi|315660000|ref|ZP_07912858.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
gi|315494901|gb|EFU83238.1| glucose inhibited division protein B [Staphylococcus lugdunensis
M23590]
Length = 240
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
++ + + + +Y L ++W++K+NL S + D +++H DS+ H + D+
Sbjct: 18 LTEKQQAQFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDSITPSFYHDFNQPLTVCDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
G+G GFP I I +++ V +++S NK+ FL ++ + R + +
Sbjct: 78 GAGAGFPSIPLKIVYPALK---VTIVDSLNKRIQFLNHLASELELQDVSFIHDRAETFGK 134
Query: 138 --MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A L L E P + +
Sbjct: 135 GVYRESYDIVTARAVARLTVLSELCLPLVKK 165
>gi|196041983|ref|ZP_03109270.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
gi|196027238|gb|EDX65858.1| 16S rRNA methyltransferase GidB [Bacillus cereus NVH0597-99]
Length = 239
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW- 75
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + + +
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKSFS 72
Query: 76 -IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|229176158|ref|ZP_04303650.1| Methyltransferase GidB [Bacillus cereus MM3]
gi|228607317|gb|EEK64647.1| Methyltransferase GidB [Bacillus cereus MM3]
Length = 239
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSEPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELGDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|19745444|ref|NP_606580.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS8232]
gi|139474384|ref|YP_001129100.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes str.
Manfredo]
gi|306827980|ref|ZP_07461247.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
gi|23821582|sp|Q8P2K1|RSMG_STRP8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224622|sp|A2RGB9|RSMG_STRPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19747557|gb|AAL97079.1| putative glucose-inhibited division protein [Streptococcus pyogenes
MGAS8232]
gi|134272631|emb|CAM30898.1| methyltransferase GidB [Streptococcus pyogenes str. Manfredo]
gi|304429899|gb|EFM32941.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes ATCC 10782]
Length = 237
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|302672306|ref|YP_003832266.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
gi|302396779|gb|ADL35684.1| methyltransferase GidB [Butyrivibrio proteoclasticus B316]
Length = 247
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M + +L+ N +S + LE+ + +Y L +KW++ +NL + + +D H
Sbjct: 1 MMRNKYSQMLKDLKSFN-VELSDKQLEQFDKYYELLIKWNEVMNLTAITDFDDVCKLHFV 59
Query: 61 DSLRVFQLHPYPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+ Q + ID+G+G GFPGI I ++ + L +S NK+ FL V
Sbjct: 60 DSISAVQYFDFSDKEYSLIDIGTGAGFPGIPLKIVFPNLH---ITLFDSLNKRLKFLDEV 116
Query: 118 VQKTAAR----GKVFACRIQ------EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R + + + D++ +RA+A++ TL EY P++
Sbjct: 117 IDTLGLNESGSIVTLHGRAEDYSSSKSKDSLRESFDLVVSRAVANMSTLCEYCLPYVK 174
>gi|289551829|ref|YP_003472733.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
gi|289181360|gb|ADC88605.1| Ribosomal RNA small subunit methyltransferase G [Staphylococcus
lugdunensis HKU09-01]
Length = 240
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
++ + + + +Y L ++W++K+NL S + D +++H DS+ H + D+
Sbjct: 18 LTEKQQAQFQTYYQLLVEWNEKMNLTSITDEHDVYLKHFYDSITPSFYHDFNQPLTVCDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
G+G GFP I I +++ V +++S NK+ FL ++ + R + +
Sbjct: 78 GAGAGFPSIPLKIVYPALK---VTIVDSLNKRIQFLNHLASELELQDVSFIHDRAETFGK 134
Query: 138 --MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A L L E P + +
Sbjct: 135 GVYRESYDIVTARAVARLTVLSELCLPLVKK 165
>gi|23100944|ref|NP_694411.1| glucose-inhibited division protein B [Oceanobacillus iheyensis
HTE831]
gi|29336682|sp|Q8EKU4|RSMG_OCEIH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22779179|dbj|BAC15445.1| glucose-inhibited division protein B [Oceanobacillus iheyensis
HTE831]
Length = 238
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
N+S + E+ ++ ++W++K+NL + + E+ +++H D + H +
Sbjct: 13 KGINLSEKQTEQFYIYFQELVEWNQKVNLTAITDQEEVYVKHFYDCVTAAFYHDFNQEIS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ + +++S K+ +FL ++ K F R +
Sbjct: 73 ICDIGAGAGFPSIPLKIVFPQLK---ITIVDSLKKRITFLNHLATKLELSNVAFYHDRAE 129
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+++ARA+A + L E P + +
Sbjct: 130 NFGKNKTFRESFDIVTARAVARMSVLSELCLPLVKK 165
>gi|15673325|ref|NP_267499.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
lactis Il1403]
gi|281491888|ref|YP_003353868.1| ribosomal rNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|13878504|sp|Q9CFX1|RSMG_LACLA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|12724325|gb|AAK05441.1|AE006366_10 glucose-inhibited division protein GidB [Lactococcus lactis subsp.
lactis Il1403]
gi|281375599|gb|ADA65105.1| Ribosomal RNA small subunit methyltransferase [Lactococcus lactis
subsp. lactis KF147]
gi|326406879|gb|ADZ63950.1| glucose inhibited division protein B [Lactococcus lactis subsp.
lactis CV56]
Length = 238
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIW 75
+S + +++ E ++ L ++W++KINL + + + +++H DS+ P
Sbjct: 15 IQLSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPILYGLITDQPVSI 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
+D+G+G GFP + I ++ V +I+S NK+ +FL + ++ R ++
Sbjct: 75 LDIGAGAGFPSLPMKIIFPELK---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAED 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q T D ++ARA+A L L E++ P+L +
Sbjct: 132 FGQDANYRGTFDFVTARAVARLSVLTEFTIPFLKK 166
>gi|322517440|ref|ZP_08070313.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
gi|322123922|gb|EFX95481.1| glucose inhibited division protein B [Streptococcus vestibularis
ATCC 49124]
Length = 237
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL +
Sbjct: 14 GFDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQGHIKNQTIR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL + + G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKILCPELD---VTIIDSLNKRINFLNLLADELDLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|125974848|ref|YP_001038758.1| methyltransferase GidB [Clostridium thermocellum ATCC 27405]
gi|256003895|ref|ZP_05428882.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281418697|ref|ZP_06249716.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|189039498|sp|A3DHY6|RSMG_CLOTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125715073|gb|ABN53565.1| 16S rRNA m(7)G-527 methyltransferase [Clostridium thermocellum ATCC
27405]
gi|255992233|gb|EEU02328.1| methyltransferase GidB [Clostridium thermocellum DSM 2360]
gi|281407781|gb|EFB38040.1| methyltransferase GidB [Clostridium thermocellum JW20]
gi|316941970|gb|ADU76004.1| methyltransferase GidB [Clostridium thermocellum DSM 1313]
Length = 242
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WI 76
N+ E ++K + + +W++K+NL + E+ ++H DS+ + + ++ I
Sbjct: 20 GVNLDDEQIDKFFAYKDVLKEWNQKMNLTAIEDDEEIILKHFIDSISICPIIKDKNLALI 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE- 134
D+G+G GFPGI I ++ V L++S K+ FL V+++ + R +E
Sbjct: 80 DVGTGAGFPGIPVKIVFPELK---VKLLDSLEKRTKFLNEVIERLDLKDISTVHARAEEK 136
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWLY 165
P D+ ARA+A L LLEY P++
Sbjct: 137 GVDPDYREKYDISVARAVASLPVLLEYCLPFVK 169
>gi|209551500|ref|YP_002283417.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|226797828|sp|B5ZV45|RSMG_RHILW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209537256|gb|ACI57191.1| methyltransferase GidB [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 205
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 88/153 (57%), Positives = 115/153 (75%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ+HP P IW
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKTINLVAPSTLDDLWNRHIADSSQVFQIHPKPVIW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V + RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHSSRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
I C ISARALADLD LLEYS PW+ +K
Sbjct: 123 HAEIGECGAISARALADLDGLLEYSAPWMLGEK 155
>gi|89897799|ref|YP_521286.1| hypothetical protein DSY5053 [Desulfitobacterium hafniense Y51]
gi|219670948|ref|YP_002461383.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
gi|122480419|sp|Q24MA0|RSMG_DESHY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89337247|dbj|BAE86842.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219541208|gb|ACL22947.1| methyltransferase GidB [Desulfitobacterium hafniense DCB-2]
Length = 239
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
R +S + +EK + ++W++K+NL S + E+ ++H DSL + L
Sbjct: 11 RLTRQRLNIELSGDQIEKFSIYADRLVEWNEKVNLTSITEPEEIILKHFVDSLALLSLV- 69
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
D+G+G GFPGI I L +E V L++S K+ FL V+++ + +
Sbjct: 70 QGKRLADIGTGAGFPGIPLKILLPEVE---VYLVDSLAKRLDFLETVIKELKLTKVQTVH 126
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ P T D +++RA+A L LLEY+ P L +
Sbjct: 127 ARAEDFARDPHYRETFDCVTSRAVARLPVLLEYAVPLLKK 166
>gi|125623940|ref|YP_001032423.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
cremoris MG1363]
gi|166224595|sp|A2RK93|RSMG_LACLM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|124492748|emb|CAL97703.1| glucose-inhibited division protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070714|gb|ADJ60114.1| 16S rRNA methyltransferase GidB [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 238
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIW 75
+S + +E+ E ++ L ++W++KINL + + + +++H DS+ P
Sbjct: 15 IKLSDKQIEQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVAPILYGLITDQPVSI 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
+D+G+G GFP + I +E V +I+S NK+ +FL + ++ R ++
Sbjct: 75 LDIGAGAGFPSLPMKIIFPELE---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAED 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q T D ++ARA+A L L E++ P+L +
Sbjct: 132 FGQDSNYRATFDFVTARAVARLSVLSEFTIPFLKK 166
>gi|222087927|ref|YP_002546465.1| glucose inhibited division protein B [Agrobacterium radiobacter
K84]
gi|254766871|sp|B9JEW2|RSMG_AGRRK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221725375|gb|ACM28531.1| glucose inhibited division protein B [Agrobacterium radiobacter
K84]
Length = 205
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 87/153 (56%), Positives = 117/153 (76%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ STV+D W RH+ DS ++FQLHP P+ W
Sbjct: 3 LNGVRVSRETQGRLQHFAELFQKWAKTINLVAPSTVDDLWRRHIADSAQIFQLHPKPARW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPGIIT+I L+ + G V+L+ES KKA+FLR +++ ARG V A RI+EA
Sbjct: 63 VDLGSGGGFPGIITAILLAEQKDGHVDLVESNQKKAAFLRVCLRECEARGAVHAVRIEEA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P+++ CDVISARALA+LD LL+Y+ PW+ + +
Sbjct: 123 PKIVADCDVISARALAELDMLLDYAAPWVERNE 155
>gi|306834178|ref|ZP_07467298.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
gi|304423751|gb|EFM26897.1| 16S rRNA methyltransferase GidB [Streptococcus bovis ATCC 700338]
Length = 244
Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ ++ E ++ L ++W++KINL + + E +++H DS+ ++
Sbjct: 20 QGFELTDTQKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIAPVLQGKITNQAI 79
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP I I I+ V +I+S NK+ +FL + + G F R
Sbjct: 80 CLLDIGAGAGFPSIPIKILCPDID---VTIIDSLNKRINFLNLLADELGLEGVHFYHGRA 136
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q + D+++ARA+A L L E + P+L
Sbjct: 137 EDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLK 172
>gi|312862573|ref|ZP_07722815.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
gi|311101978|gb|EFQ60179.1| 16S rRNA methyltransferase GidB [Streptococcus vestibularis F0396]
Length = 237
Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL +
Sbjct: 14 GFDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLAPVLQGHIKNQTIR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL + + G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKILCPELD---VTIIDSLNKRINFLNLLADELDLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|329925034|ref|ZP_08279978.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
gi|328940153|gb|EGG36485.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Paenibacillus sp.
HGF5]
Length = 240
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ + + L + E +Y + ++W++K+NL + E + +H DS+ + I
Sbjct: 15 HGIKIDEKQLHQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSITLAFYVDMNKIGN 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+GSG GFPGI I ++ + +++S NK+ +FL++V ++ R +
Sbjct: 75 LADIGSGAGFPGIPLKICFPHLK---LTIVDSLNKRITFLKHVADTLGLSEVELIHGRAE 131
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
E + D+++ARA+A + L E+ P+
Sbjct: 132 EVARKHGYRDGFDLVTARAVARMAVLNEFCLPFTK 166
>gi|30265500|ref|NP_847877.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42784678|ref|NP_981925.1| 16S rRNA methyltransferase GidB [Bacillus cereus ATCC 10987]
gi|47531068|ref|YP_022417.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. 'Ames
Ancestor']
gi|47568681|ref|ZP_00239378.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49188319|ref|YP_031572.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Sterne]
gi|49480474|ref|YP_039472.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65317463|ref|ZP_00390422.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Bacillus anthracis
str. A2012]
gi|118480509|ref|YP_897660.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis str. Al
Hakam]
gi|165873015|ref|ZP_02217636.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167635020|ref|ZP_02393337.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|167641727|ref|ZP_02399970.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|170689463|ref|ZP_02880653.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|170707495|ref|ZP_02897948.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|177655291|ref|ZP_02936845.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190569287|ref|ZP_03022181.1| 16S rRNA methyltransferase GidB [Bacillus anthracis Tsiankovskii-I]
gi|196036141|ref|ZP_03103541.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196045489|ref|ZP_03112720.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206975810|ref|ZP_03236721.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218906674|ref|YP_002454508.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|222098959|ref|YP_002533017.1| 16S rRNA methyltransferase gidb [Bacillus cereus Q1]
gi|225867463|ref|YP_002752841.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227818251|ref|YP_002818260.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228918094|ref|ZP_04081622.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228930488|ref|ZP_04093488.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228936762|ref|ZP_04099553.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228949204|ref|ZP_04111472.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229094593|ref|ZP_04225660.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|229124985|ref|ZP_04254159.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|229142231|ref|ZP_04270755.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|229187711|ref|ZP_04314847.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|229199694|ref|ZP_04326337.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|229600306|ref|YP_002869691.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|254687077|ref|ZP_05150935.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str.
CNEVA-9066]
gi|254724140|ref|ZP_05185925.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A1055]
gi|254735157|ref|ZP_05192867.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Western
North America USA6153]
gi|254742134|ref|ZP_05199821.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Kruger B]
gi|254755956|ref|ZP_05207988.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Vollum]
gi|254761364|ref|ZP_05213386.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Australia
94]
gi|300118816|ref|ZP_07056536.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|301056956|ref|YP_003795167.1| glucose-inhibited division protein B [Bacillus anthracis CI]
gi|38257413|sp|Q81JH4|RSMG_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976409|sp|Q6HAF4|RSMG_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976456|sp|Q72WU5|RSMG_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224574|sp|A0RLR0|RSMG_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725349|sp|B7JIK9|RSMG_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766877|sp|C3P3F3|RSMG_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766878|sp|C3LGT9|RSMG_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766879|sp|C1ER75|RSMG_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766880|sp|B9IT40|RSMG_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|30260178|gb|AAP29363.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. Ames]
gi|42740610|gb|AAS44533.1| glucose-inhibited division protein B [Bacillus cereus ATCC 10987]
gi|47506216|gb|AAT34892.1| glucose-inhibited division protein B [Bacillus anthracis str. 'Ames
Ancestor']
gi|47554669|gb|EAL13023.1| methyltransferase GidB [Bacillus cereus G9241]
gi|49182246|gb|AAT57622.1| glucose-inhibited division protein B [Bacillus anthracis str.
Sterne]
gi|49332030|gb|AAT62676.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|118419734|gb|ABK88153.1| 16S rRNA m(7)G-527 methyltransferase [Bacillus thuringiensis str.
Al Hakam]
gi|164711227|gb|EDR16783.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0488]
gi|167510281|gb|EDR85684.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0193]
gi|167529494|gb|EDR92244.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0442]
gi|170127491|gb|EDS96365.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0389]
gi|170666565|gb|EDT17338.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0465]
gi|172080218|gb|EDT65310.1| glucose-inhibited division protein B [Bacillus anthracis str.
A0174]
gi|190559594|gb|EDV13585.1| 16S rRNA methyltransferase GidB [Bacillus anthracis Tsiankovskii-I]
gi|195991308|gb|EDX55276.1| 16S rRNA methyltransferase GidB [Bacillus cereus W]
gi|196023696|gb|EDX62372.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB108]
gi|206745904|gb|EDZ57300.1| 16S rRNA methyltransferase GidB [Bacillus cereus H3081.97]
gi|218540166|gb|ACK92564.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH820]
gi|221243018|gb|ACM15728.1| glucose-inhibited division protein B [Bacillus cereus Q1]
gi|225789230|gb|ACO29447.1| 16S rRNA methyltransferase GidB [Bacillus cereus 03BB102]
gi|227006072|gb|ACP15815.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. CDC 684]
gi|228583789|gb|EEK41964.1| Methyltransferase GidB [Bacillus cereus m1293]
gi|228595779|gb|EEK53463.1| Methyltransferase GidB [Bacillus cereus BGSC 6E1]
gi|228641249|gb|EEK97556.1| Methyltransferase GidB [Bacillus cereus BDRD-ST26]
gi|228658486|gb|EEL14152.1| Methyltransferase GidB [Bacillus cereus 95/8201]
gi|228688840|gb|EEL42671.1| Methyltransferase GidB [Bacillus cereus Rock3-42]
gi|228810487|gb|EEM56840.1| Methyltransferase GidB [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228822971|gb|EEM68812.1| Methyltransferase GidB [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228829207|gb|EEM74844.1| Methyltransferase GidB [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228841574|gb|EEM86690.1| Methyltransferase GidB [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229264714|gb|ACQ46351.1| 16S rRNA methyltransferase GidB [Bacillus anthracis str. A0248]
gi|298723784|gb|EFI64506.1| 16S rRNA methyltransferase GidB [Bacillus cereus SJ1]
gi|300379125|gb|ADK08029.1| glucose-inhibited division protein B [Bacillus cereus biovar
anthracis str. CI]
gi|324329433|gb|ADY24693.1| 16S rRNA methyltransferase GidB [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 239
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|55820410|ref|YP_138852.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMG
18311]
gi|55822292|ref|YP_140733.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus
CNRZ1066]
gi|81559821|sp|Q5M1E6|RSMG_STRT1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81560991|sp|Q5M5Y2|RSMG_STRT2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55736395|gb|AAV60037.1| glucose-inhibited division protein B [Streptococcus thermophilus
LMG 18311]
gi|55738277|gb|AAV61918.1| glucose-inhibited division protein B [Streptococcus thermophilus
CNRZ1066]
gi|312277715|gb|ADQ62372.1| Ribosomal RNA small subunit methyltransferase G [Streptococcus
thermophilus ND03]
Length = 237
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL +
Sbjct: 14 GFDLSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLAPVLQGHIKNQSIQ 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I +++ V +I+S NK+ +FL ++ + G F R +
Sbjct: 74 LLDIGAGAGFPSLPIKILCPNLD---VTIIDSLNKRITFLNFLSDELGLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|323141445|ref|ZP_08076335.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium sp. YIT
12067]
gi|322414101|gb|EFY04930.1| 16S rRNA methyltransferase GidB [Phascolarctobacterium sp. YIT
12067]
Length = 239
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL + + LE+ +Y L ++ +K +NL + + E+ ++H+ DSL ++
Sbjct: 5 EILAEKGAEAGLSFTPLQLEQFSRYYELLVETNKVMNLTAITEPEEVAVKHMVDSLLAYE 64
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
D+G+G GFPG+ I ++ V LI+S K+ FL+ V+++ +G +
Sbjct: 65 AEMAGKTLADVGTGAGFPGVPLKIYCPELK---VTLIDSLGKRLRFLQQVIEELGVKGIR 121
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++A + D ++ARA+A L L EY P +
Sbjct: 122 CEHLRAEDAGRDKKHREKYDYVTARAVARLSVLSEYCLPLAKK 164
>gi|217962974|ref|YP_002341552.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
gi|226725352|sp|B7HZG8|RSMG_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|217066626|gb|ACJ80876.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH187]
Length = 239
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGIPLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|52145290|ref|YP_086747.1| glucose-inhibited division protein B [Bacillus cereus E33L]
gi|81685204|sp|Q630C0|RSMG_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51978759|gb|AAU20309.1| glucose-inhibited division protein B [Bacillus cereus E33L]
Length = 239
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|255283804|ref|ZP_05348359.1| 16S rRNA methyltransferase GidB [Bryantella formatexigens DSM
14469]
gi|255265687|gb|EET58892.1| 16S rRNA methyltransferase GidB [Bryantella formatexigens DSM
14469]
Length = 261
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
++S++ L + E +Y L +KW+ +NL + + E+ +H DSL + +
Sbjct: 39 GIDLSQKQLLQFEKYYELLIKWNSLMNLTAITEHEEVLKKHFLDSLSIVKTVDMTKIHTL 98
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+G GFPGI I ++ V L++S K+ FL +V ++ R ++
Sbjct: 99 MDVGTGAGFPGIPLKISYPHLK---VVLLDSLGKRVKFLNHVTEELGLEDISAIHGRAED 155
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D+ +RA+A+L +L EY P+ +
Sbjct: 156 FARQEKYRESFDLCVSRAVANLSSLSEYCIPYTKK 190
>gi|182416728|ref|ZP_02948127.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237669667|ref|ZP_04529645.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182379385|gb|EDT76880.1| methyltransferase GidB [Clostridium butyricum 5521]
gi|237654901|gb|EEP52463.1| 16S rRNA methyltransferase GidB [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 239
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIW 75
+S + E+ + L +W++KINL + + E+ +H D ++ F+ +
Sbjct: 15 GLQLSEQQYERFMKYMRLLQEWNEKINLTAITEDEEVVKKHFIDCIKAFKRDEFKKAETL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G GFPG+ +I ++ V L++S NK+ +FL VVQ+ + R ++
Sbjct: 75 IDVGTGAGFPGLPIAIMREDLK---VTLLDSLNKRINFLNTVVQELGLKNVTTIHSRAED 131
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ ++RA+A++ L E+ P++
Sbjct: 132 GARNKDLREQFDISTSRAVANMSVLSEFCLPYVK 165
>gi|30023506|ref|NP_835137.1| glucose-inhibited division protein B [Bacillus cereus ATCC 14579]
gi|75761488|ref|ZP_00741452.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218232716|ref|YP_002370257.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218900623|ref|YP_002449034.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228905426|ref|ZP_04069381.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|228942631|ref|ZP_04105163.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228955732|ref|ZP_04117727.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228961746|ref|ZP_04123349.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228968634|ref|ZP_04129617.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228975561|ref|ZP_04136113.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228982197|ref|ZP_04142486.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|229020707|ref|ZP_04177434.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|229026923|ref|ZP_04183246.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|229051151|ref|ZP_04194695.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|229072947|ref|ZP_04206143.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|229099909|ref|ZP_04230832.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|229112895|ref|ZP_04242426.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|229118972|ref|ZP_04248317.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|229130728|ref|ZP_04259681.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|229148032|ref|ZP_04276371.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|229181728|ref|ZP_04309051.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|296505910|ref|YP_003667610.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|38257406|sp|Q814F8|RSMG_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725350|sp|B7IST2|RSMG_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725351|sp|B7H7A0|RSMG_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29899067|gb|AAP12338.1| Glucose inhibited division protein B [Bacillus cereus ATCC 14579]
gi|74491027|gb|EAO54279.1| Methyltransferase gidB [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218160673|gb|ACK60665.1| 16S rRNA methyltransferase GidB [Bacillus cereus B4264]
gi|218542469|gb|ACK94863.1| 16S rRNA methyltransferase GidB [Bacillus cereus G9842]
gi|228601761|gb|EEK59259.1| Methyltransferase GidB [Bacillus cereus 172560W]
gi|228635457|gb|EEK91948.1| Methyltransferase GidB [Bacillus cereus BDRD-ST24]
gi|228652745|gb|EEL08630.1| Methyltransferase GidB [Bacillus cereus BDRD-Cer4]
gi|228664497|gb|EEL19993.1| Methyltransferase GidB [Bacillus cereus Rock1-3]
gi|228670574|gb|EEL25887.1| Methyltransferase GidB [Bacillus cereus Rock1-15]
gi|228683524|gb|EEL37479.1| Methyltransferase GidB [Bacillus cereus Rock3-29]
gi|228710193|gb|EEL62171.1| Methyltransferase GidB [Bacillus cereus F65185]
gi|228722214|gb|EEL73615.1| Methyltransferase GidB [Bacillus cereus AH676]
gi|228734381|gb|EEL85052.1| Methyltransferase GidB [Bacillus cereus AH1272]
gi|228740602|gb|EEL90873.1| Methyltransferase GidB [Bacillus cereus AH1273]
gi|228777549|gb|EEM25827.1| Methyltransferase GidB [Bacillus thuringiensis Bt407]
gi|228784171|gb|EEM32198.1| Methyltransferase GidB [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228791063|gb|EEM38681.1| Methyltransferase GidB [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228797940|gb|EEM44950.1| Methyltransferase GidB [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228803960|gb|EEM50584.1| Methyltransferase GidB [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228817057|gb|EEM63150.1| Methyltransferase GidB [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228854246|gb|EEM98949.1| Methyltransferase GidB [Bacillus thuringiensis IBL 4222]
gi|296326962|gb|ADH09890.1| glucose-inhibited division protein B [Bacillus thuringiensis
BMB171]
gi|326943280|gb|AEA19176.1| glucose-inhibited division protein B [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 239
Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|228911322|ref|ZP_04075126.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
gi|228848340|gb|EEM93190.1| Methyltransferase GidB [Bacillus thuringiensis IBL 200]
Length = 239
Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGIPLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|325294200|ref|YP_004280064.1| 16S rRNA methyltransferase GidB [Agrobacterium sp. H13-3]
gi|325062053|gb|ADY65744.1| 16S rRNA methyltransferase GidB [Agrobacterium sp. H13-3]
Length = 205
Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats.
Identities = 81/148 (54%), Positives = 109/148 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+N +VSRET E+LE+F LF KW+K NLV+ ST+ + W RHV DS ++FQL P P W
Sbjct: 3 INGQSVSRETQERLEHFVELFKKWNKTTNLVAPSTLTELWSRHVADSAQIFQLAPQPQKW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I L+ + G V+L+ES NKK +FLR +++T ARG V + RI++A
Sbjct: 63 IDLGSGGGFPGVITAIFLAELGDGWVDLVESNNKKPAFLRIALKETGARGAVHSVRIEKA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
P+ + CD ISARALA+++ L EY PW
Sbjct: 123 PETVENCDAISARALAEMNLLFEYIHPW 150
>gi|261420900|ref|YP_003254582.1| 16S rRNA methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|319768571|ref|YP_004134072.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
gi|261377357|gb|ACX80100.1| methyltransferase GidB [Geobacillus sp. Y412MC61]
gi|317113437|gb|ADU95929.1| methyltransferase GidB [Geobacillus sp. Y412MC52]
Length = 238
Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+ ++L +L +S L + E +Y L ++W++K+NL + + +++H
Sbjct: 1 MEATQFQTMLEERGIL----LSSRALAQFERYYELLVEWNEKMNLTAITDKLGVYVKHFF 56
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS+ + + P D+GSG GFP + I + V++++S K+ FL +++
Sbjct: 57 DSVSPAFYYDFSAPLALCDVGSGAGFPSLPLKICFPHLR---VSIVDSLQKRIRFLEHLI 113
Query: 119 QKTAA-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++ R + M + DV++ARA+A + L+E P +
Sbjct: 114 TELGLADVALYHERAETFARQKGMRESFDVVTARAVARMPVLVELCLPLVK 164
>gi|319936584|ref|ZP_08010998.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
gi|319808382|gb|EFW04942.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
29_1]
Length = 234
Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
++S L++ E +Y ++W++K+NL + + ED +++H DSL + F
Sbjct: 13 KGISLSDYQLKQFEIYYNTLVEWNEKMNLTAITQKEDVYLKHFYDSLTISFDFDFNNQTL 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
D+G+G GFP I I ++ + +++S K+ +FL Y+ Q + R ++
Sbjct: 73 CDIGAGAGFPSIPLKIVYPDLK---ITIVDSLTKRITFLNYLTQVLKLNNVTAVSARAED 129
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
A T D+++ARA+A L+ L E P +
Sbjct: 130 YAIGHRETFDIVTARAVARLNILDELCLPLVR 161
>gi|228924227|ref|ZP_04087498.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835445|gb|EEM80815.1| Methyltransferase GidB [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 239
Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|25011716|ref|NP_736111.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae NEM316]
gi|77408471|ref|ZP_00785209.1| methyltransferase GidB [Streptococcus agalactiae COH1]
gi|77411914|ref|ZP_00788245.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77414723|ref|ZP_00790853.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|29336669|sp|Q8E3T0|RSMG_STRA3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24413256|emb|CAD47335.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159230|gb|EAO70411.1| methyltransferase GidB [Streptococcus agalactiae 515]
gi|77162011|gb|EAO72991.1| methyltransferase GidB [Streptococcus agalactiae CJB111]
gi|77172913|gb|EAO76044.1| methyltransferase GidB [Streptococcus agalactiae COH1]
Length = 237
Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ + ++ E ++ L ++W++KINL + + E+ +++H DS+ + P
Sbjct: 13 HGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDNSPL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP I I I+ + +I+S NK+ +FL + + G F R
Sbjct: 73 SILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLK 165
>gi|310644869|ref|YP_003949628.1| ribosomal RNA small subunit methyltransferase g [Paenibacillus
polymyxa SC2]
gi|309249820|gb|ADO59387.1| Ribosomal RNA small subunit methyltransferase G [Paenibacillus
polymyxa SC2]
Length = 240
Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDL 78
++ LE+ E +Y + ++W++K+NL + E + +H DS+ + P D+
Sbjct: 19 INDSQLEQFETYYRVLVEWNEKMNLTGITEREAVYTKHFYDSVSLAFYVPLNDVESLADI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
GSG GFPGI I I+ + +++S NK+ FL +VV++ ++ R +E +
Sbjct: 79 GSGAGFPGIPLKICFPHIQ---LTIVDSLNKRIQFLAHVVEQLGLENVELIHSRAEELGR 135
Query: 138 ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A L L E+ P++ +
Sbjct: 136 KAGYRDSYDLVTARAVARLAVLNEFCLPFVRE 167
>gi|315644288|ref|ZP_07897458.1| methyltransferase GidB [Paenibacillus vortex V453]
gi|315280663|gb|EFU43952.1| methyltransferase GidB [Paenibacillus vortex V453]
Length = 240
Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SI 74
+ + + L++ E +Y + ++W++K+NL + E + +H DS+ +
Sbjct: 15 HGITIDEKQLQQFEMYYEVLVEWNEKMNLTGITEREQVYTKHFYDSVTLAFYVDMSKIGS 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
D+GSG GFPGI I I+ + +++S NK+ +FL++VV ++ R +
Sbjct: 75 MADIGSGAGFPGIPLKICFPHIK---LTIVDSLNKRITFLKFVVDTLGLSSVELIHGRAE 131
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
E + D+++ARA+A + L E+ P+
Sbjct: 132 EVARKQGYRDGFDLVTARAVARMAVLNEFCLPFTK 166
>gi|332971195|gb|EGK10158.1| glucose inhibited division protein B [Desmospora sp. 8437]
Length = 242
Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
A ++ E L+ +Y L ++ +KK+NL + + ++ +++H DSL +
Sbjct: 9 EAARERLRMQLNGEQLDLFYRYYHLLVEGNKKMNLTAITDEKEVFVKHFFDSLTLASHLS 68
Query: 71 YPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ + ID+G+G GFPGI I + + L++S NK+ +F++ V + RG +
Sbjct: 69 FAEVDSLIDVGTGAGFPGIPLKIAYPHLR---LVLLDSLNKRVTFMKESVAELGLRGVEC 125
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +EA P + DV +ARA+A L+ L EY P++
Sbjct: 126 VHGRAEEAARKPMFRESFDVATARAVARLNVLAEYCLPFVR 166
>gi|76787171|ref|YP_330246.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae A909]
gi|123601392|sp|Q3JZQ7|RSMG_STRA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76562228|gb|ABA44812.1| glucose-inhibited division protein B [Streptococcus agalactiae
A909]
Length = 237
Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ + ++ E ++ L ++W++KINL + + E+ +++H DS+ + P
Sbjct: 13 HGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDNSPL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP I I I+ + +I+S NK+ +FL + + G F R
Sbjct: 73 SILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFGQDRVFRAKFDIVTARAVARMQVLAELTIPFLK 165
>gi|303240049|ref|ZP_07326570.1| methyltransferase GidB [Acetivibrio cellulolyticus CD2]
gi|302592318|gb|EFL62045.1| methyltransferase GidB [Acetivibrio cellulolyticus CD2]
Length = 242
Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L A ++ E EK + + +W++KINL + D I+H DSL + L
Sbjct: 11 LLIAGANEFNIPLNEEQAEKFFKYKNVLKEWNEKINLTAIEDDRDIIIKHFIDSLSILPL 70
Query: 69 HPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+I ID+G+G GFPGI I SIE V L++S +K+ FL V+++ G K
Sbjct: 71 IKGDNIKLIDVGTGAGFPGIPVKIARESIE---VTLLDSLDKRVKFLNEVIKEDGLTGIK 127
Query: 127 VFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E P+ D+ +ARA+A L L+EY P++
Sbjct: 128 ALHGRAEEKAVLPEFREKYDICTARAVASLPVLIEYCLPFVK 169
>gi|320527144|ref|ZP_08028331.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
gi|320132472|gb|EFW25015.1| 16S rRNA methyltransferase GidB [Solobacterium moorei F0204]
Length = 232
Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S +++LE + L ++W++K+NL + + + +H DS+ D
Sbjct: 14 QISLSETQVKQLEQYAQLLVEWNEKMNLTAITEHGEILEKHFYDSILPLGKGKIFGKIAD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-A 135
+G+G GFPG++ I ++ V+LIE K+ +FL+ V+ + V+ R +E
Sbjct: 74 VGTGAGFPGLVWKIVKPELD---VSLIEPTGKRCTFLQEVMNQLHLENIHVYNTRAEEQV 130
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
DV++ARA+A+L L E P +
Sbjct: 131 KTDREQYDVVTARAVANLRVLSELCIPLVK 160
>gi|50913652|ref|YP_059624.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10394]
gi|73919635|sp|Q5XDS2|RSMG_STRP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50902726|gb|AAT86441.1| Methyltransferase [Streptococcus pyogenes MGAS10394]
Length = 237
Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + +++H DS+ L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDAVTARAVARMQVLSELTIPFLK 165
>gi|323486762|ref|ZP_08092081.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323694904|ref|ZP_08109054.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
gi|323399901|gb|EGA92280.1| ribosomal RNA small subunit methyltransferase G [Clostridium
symbiosum WAL-14163]
gi|323500994|gb|EGB16906.1| glucose inhibited division protein B [Clostridium symbiosum
WAL-14673]
Length = 242
Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ ++ +E+ +Y L + W+ INL + + +++ +H DSL + ++
Sbjct: 9 LKEELKQIDVELTERQIEQFYNYYELLIHWNSMINLTAITQLDEVVTKHFVDSLSLKKII 68
Query: 70 ----PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPGI I ++ + L++S NK+ FL VV+
Sbjct: 69 VDIGQKSQSLIDVGTGAGFPGIPLKIAFPELK---ITLLDSLNKRVKFLNEVVETLQLDN 125
Query: 126 -KVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + T D+ +RA+A+L TL EY P++
Sbjct: 126 ITAVHGRAEDYGRDNVSRETFDICVSRAVANLSTLAEYCMPFVK 169
>gi|89100945|ref|ZP_01173792.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
gi|89084354|gb|EAR63508.1| glucose-inhibited division protein B [Bacillus sp. NRRL B-14911]
Length = 238
Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSI 74
++S +++ +Y ++W++K+NL + + + +++H DS+ + P
Sbjct: 13 KGISLSPRQIDQYNIYYETLVEWNEKMNLTAITDKPEVYLKHFYDSVSAAFYFDFSKPLH 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+G+G GFP + I I V +++S NK+ +FL ++ K + R +
Sbjct: 73 ICDVGAGAGFPSLPIKIAFPEI---SVTIVDSLNKRINFLEHLAGKLGLENVRFVHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + DV++ARA+A + L E P
Sbjct: 130 TFGQNKEYREAFDVVTARAVARMSVLTELCLPL 162
>gi|206970084|ref|ZP_03231037.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|229193733|ref|ZP_04320674.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
gi|206734661|gb|EDZ51830.1| 16S rRNA methyltransferase GidB [Bacillus cereus AH1134]
gi|228589758|gb|EEK47636.1| Methyltransferase GidB [Bacillus cereus ATCC 10876]
Length = 239
Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ + +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---ITIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYDIVMARAVARLSVLSELCLPLVK 164
>gi|167759569|ref|ZP_02431696.1| hypothetical protein CLOSCI_01926 [Clostridium scindens ATCC 35704]
gi|167662796|gb|EDS06926.1| hypothetical protein CLOSCI_01926 [Clostridium scindens ATCC 35704]
Length = 237
Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L ++ ++ + FY L ++W+K +NL + + +H DSL + ++
Sbjct: 4 LLEEKLEKLGIQINEIQRKQFDDFYQLLVEWNKVMNLTGITEYGEVVEKHFVDSLSLVEV 63
Query: 69 HPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
++ ID+G+G GFPGI I + + L++S NK+ FL V+++ +
Sbjct: 64 LDLENVNHVIDVGTGAGFPGIPLKIAFPHLR---ITLLDSLNKRIKFLDTVIKELGLKDI 120
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ +RA+A+L TL EY P++
Sbjct: 121 HTIHGRAEDYARQAEYREKYDLCVSRAVANLATLSEYCLPYIR 163
>gi|315305256|ref|ZP_07875212.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
gi|313626378|gb|EFR95555.1| 16S rRNA methyltransferase GidB [Listeria ivanovii FSL F6-596]
Length = 238
Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + ++ L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFKMALAEKGIELNEVQLKQFRDYFEMLVEWNEKMNLTAITEEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP I I +E V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTEFRSICDVGAGAGFPSIPLKICFPHLE---VSIVDSLKKRMTFLEALAEKLVL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + ++++ARA+A + L E P + +
Sbjct: 119 TNVHFYHDRAETFGQNKAHREKYNLVTARAVARMSVLSELCLPLVKK 165
>gi|291521112|emb|CBK79405.1| 16S rRNA m(7)G-527 methyltransferase [Coprococcus catus GD/7]
Length = 239
Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWI 76
+S E + +Y + ++ +K +NL + ++F +H DSL + I
Sbjct: 16 IKLSDEQYNQYVTYYEMVVEKNKVMNLTGITEFDEFIDKHYIDSLSIVNAVDIHQVQSAI 75
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G GFPGI I ++ + L++S NK+ +FL VV+ + R ++
Sbjct: 76 DVGTGAGFPGIPLKIAFPHLK---ITLLDSLNKRINFLNEVVETLGLENVETCHGRAEDF 132
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ ++RA+A+L TL EY P++
Sbjct: 133 GHRKEYREQYDLCTSRAVANLSTLSEYCVPFVK 165
>gi|326692159|ref|ZP_08229164.1| 16S rRNA methyltransferase GidB [Leuconostoc argentinum KCTC 3773]
Length = 239
Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PS 73
++ +++ E ++ + + + +NL + + +D +++H DSL V Q
Sbjct: 14 GIQLTENQIQQFEQYFDMLVATNAHVNLTAITEKKDVYLKHFYDSLTVAQYEKDLQQTNG 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFP + I +++ + ++++ K+ FL+ VV G + R
Sbjct: 74 TLIDVGTGAGFPSLPLKIAFPNLQ---ITMVDALQKRVKFLQDVVTTLGITGVTIVHGRA 130
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ P+ D +ARA+A L EY+ P++
Sbjct: 131 EDIGQDPKYREQFDYATARAVARTSVLAEYTLPFVK 166
>gi|328958782|ref|YP_004376168.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
gi|328675106|gb|AEB31152.1| Ribosomal RNA small subunit methyltransferase G [Carnobacterium sp.
17-4]
Length = 238
Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + V+ + +E+ + + L +W+ KINL + + E+ +++H DS+
Sbjct: 2 NPEEFKTALEDKGLVVTEKQMEQFDQYLKLLQEWNGKINLTAITQKEEVYLKHFYDSITA 61
Query: 66 ---FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D+G+G GFP I I +E V +++S NK+ FL + Q
Sbjct: 62 GLYVDFTKGVQSLCDVGAGAGFPSIPLKIIFPQLE---VTIVDSLNKRIQFLTLLAQTLE 118
Query: 123 ARGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G F R + + Q + D ++ARA+A + L E P + +
Sbjct: 119 LDGVHFYHDRAETFGQNKQFRESFDFVTARAVARMSVLSELCLPLVKK 166
>gi|77405787|ref|ZP_00782871.1| methyltransferase GidB [Streptococcus agalactiae H36B]
gi|77175574|gb|EAO78359.1| methyltransferase GidB [Streptococcus agalactiae H36B]
Length = 237
Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ + ++ E ++ L ++W++KINL + + E+ +++H DS+ + P
Sbjct: 13 HGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDNSPL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP I I I+ + +I+S NK+ +FL + K G F R
Sbjct: 73 SILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANKLELSGVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLK 165
>gi|229159042|ref|ZP_04287098.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
gi|228624461|gb|EEK81232.1| Methyltransferase GidB [Bacillus cereus ATCC 4342]
Length = 239
Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ E ++ ++W++K+NL + + ++ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKKEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|331086946|ref|ZP_08336022.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409607|gb|EGG89046.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 240
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+ E+ + FY + ++W++ +NL + E+ +H DS+ + + S+ ID+
Sbjct: 17 LDDRQKEQFDLFYEILVEWNEFMNLTGITEYEEVNEKHFVDSVSIVKAMDMKSVKSVIDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP- 136
G+G GFPGI I +E V L++S NK+ FL V++K +G + R ++
Sbjct: 77 GTGAGFPGIPLKIVFPELE---VVLLDSLNKRVKFLNAVIEKLQLKGIRAIHGRAEDYAK 133
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ +RA+A+L TL EY P++ +
Sbjct: 134 QQEYREQFDLCVSRAVANLATLSEYCLPYVKK 165
>gi|293399789|ref|ZP_06643935.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306189|gb|EFE47432.1| 16S rRNA methyltransferase GidB [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 236
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ L++ + + L+W++K+NL + + +++ + +H DS+ + D
Sbjct: 18 GITLQDTQLQQFAMYAAMLLEWNQKMNLTAITDMDEIYEKHFLDSILPSFDVKLKGTFCD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE-A 135
+G+G GFP I I +E + ++E+ K+ +FL + + R ++ A
Sbjct: 78 VGAGAGFPSIPLKIVYPDLE---ITIVETLGKRITFLEALCHQLKLNNVHCVHARAEDYA 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++SARA+A+L L E P +
Sbjct: 135 KEHRESFDIVSARAVANLTMLSELCIPLVK 164
>gi|257871375|ref|ZP_05651028.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
gi|257805539|gb|EEV34361.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
gallinarum EG2]
Length = 237
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + +S E L++ +Y ++W++K+NL + + ++ +++H DS+ +
Sbjct: 3 PEEFQKQLSIQGIELSSEQLKQFATYYDRLIEWNQKMNLTAITDQKEVYLKHFYDSISLA 62
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + D+GSG GFP I I ++ + +++S NK+ +FL+ +V +
Sbjct: 63 FVTAFKEDAHLCDVGSGAGFPSIPLKIIFPQLK---ITIVDSLNKRITFLQTLVADLGLK 119
Query: 125 GK-VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+F R + Q + D ++ARA+A L+ L E P + +
Sbjct: 120 DVYLFHDRAETFGQKEFRESFDYVTARAVARLNILTELCLPLVKK 164
>gi|205371921|ref|ZP_03224741.1| glucose-inhibited division protein B [Bacillus coahuilensis m4-4]
Length = 224
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
++S LE+ E ++ + ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGISLSPRQLEQFEQYFSILVEWNEKMNLTAITDREEVYLKHFFDSISAAFYYDFSKDLH 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I I+ V++++S NK+ FL ++ + F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHIK---VSIVDSLNKRIQFLNFLGNELGLEHVYFYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ DV++ARA+A L L E P
Sbjct: 130 TFGQNSDHREKYDVVTARAVARLSVLSELCLPLAK 164
>gi|296111116|ref|YP_003621497.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
gi|295832647|gb|ADG40528.1| glucose inhibited division protein B [Leuconostoc kimchii IMSNU
11154]
Length = 239
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PS 73
++ + + + E ++ L + ++++NL + + +D +++H DSL V
Sbjct: 14 GITLTDQQIRQFEQYFNLLVARNEQVNLTAITEKDDVYLKHFYDSLTVLFYEKKLKVPGK 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
ID+G+G GFP + I L ++ + +++S K+ +FL+ VV + ++ R
Sbjct: 74 TLIDIGTGAGFPSLPLKIVLPDLQ---ITMVDSLQKRVNFLQEVVTELGLSHVEIVHGRA 130
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ P+ D +ARA+A L EY+ P++
Sbjct: 131 EDIGQKPKYREQFDYATARAVARTSVLAEYTLPFVK 166
>gi|116627232|ref|YP_819851.1| 16S rRNA methyltransferase GidB [Streptococcus thermophilus LMD-9]
gi|122268165|sp|Q03MB7|RSMG_STRTD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116100509|gb|ABJ65655.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus thermophilus
LMD-9]
Length = 237
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 83/155 (53%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+++S++ ++ + ++ L ++W++KINL + + ++ +++H DSL +
Sbjct: 14 GFDLSQKQKDQFQRYFELLVEWNEKINLTAITDKDEVFLKHFYDSLAPVLQGHIKNQSIQ 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I +++ V +I+S N++ +FL ++ + G F R +
Sbjct: 74 LLDIGAGAGFPSLPIKILCPNLD---VTIIDSLNRRITFLNFLSDELGLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|329767566|ref|ZP_08259087.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
gi|328839193|gb|EGF88777.1| 16S rRNA methyltransferase GidB [Gemella haemolysans M341]
Length = 237
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
+S E+ +Y L ++W++KINL + + ++F+ +H DS+ + Y +
Sbjct: 15 GIELSELQKEQYSKYYDLVVEWNQKINLTAITEEDEFYTKHFFDSISLAFYKDYSNIESI 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+GSG GFP I I +++ V +++S NK+ FL V + R +E
Sbjct: 75 CDVGSGAGFPSIPLKILYPNLK---VTIVDSLNKRIKFLNLVKDELGLSDCNFVHARAEE 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q + ++++ARA+A L+ L E P + +
Sbjct: 132 FGQNKDYRESFEIVTARAVARLNVLAELCLPLVKK 166
>gi|323487694|ref|ZP_08092952.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
gi|323398428|gb|EGA91216.1| methyltransferase gidB [Planococcus donghaensis MPA1U2]
Length = 237
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + ++ LE+ ++ ++W+ K+NL + + +++H DS+
Sbjct: 2 NEQQFKDALSEKGIVLTDTQLEQFRIYHKELVEWNDKMNLTAITEQTTVYLKHFYDSITA 61
Query: 66 FQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P D+G+G GFP I I IE V +++S NK+ FL+++ +
Sbjct: 62 AFYLDFTKPMNICDVGAGAGFPSIPLKICFPHIE---VTIVDSLNKRIQFLQHLSGELGL 118
Query: 124 -RGKVFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R ++ Q + DV++ARA+A L L E P + +
Sbjct: 119 TKVQFVHSRAEDFGQSSHRESYDVVTARAVARLSVLAELCVPLVKK 164
>gi|167748065|ref|ZP_02420192.1| hypothetical protein ANACAC_02809 [Anaerostipes caccae DSM 14662]
gi|167652057|gb|EDR96186.1| hypothetical protein ANACAC_02809 [Anaerostipes caccae DSM 14662]
Length = 236
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ L + E +Y L + +K +NL + + ED ++H DSL + +
Sbjct: 4 LREKAEELGIALTDRQLAQFEIYYELLTEKNKVMNLTAITEREDVILKHFVDSLALVKAE 63
Query: 70 --PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+D+G+G GFPGI I ++ + L++S NK+ FL+ V+
Sbjct: 64 CGFSSQKILDVGTGAGFPGIPLKIAFPGLK---IVLLDSLNKRVKFLQEVIDALELHDIT 120
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D++ +RA+A+L TL EY P++
Sbjct: 121 AVHGRAEDYARQKEYREQFDLVVSRAVANLSTLSEYCLPYVK 162
>gi|22537769|ref|NP_688620.1| 16S rRNA methyltransferase GidB [Streptococcus agalactiae 2603V/R]
gi|76799422|ref|ZP_00781572.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
gi|29336666|sp|Q8DY64|RSMG_STRA5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22534661|gb|AAN00493.1|AE014266_4 glucose-inhibited division protein B [Streptococcus agalactiae
2603V/R]
gi|76585231|gb|EAO61839.1| methyltransferase GidB [Streptococcus agalactiae 18RS21]
Length = 237
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ + ++ E ++ L ++W++KINL + + E+ +++H DS+ + P
Sbjct: 13 HGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGYIDNSPL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP I I I+ + +I+S NK+ +FL + + G F R
Sbjct: 73 SILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFGQDRVFRAKFDIVTARAVAKMQVLAELTIPFLK 165
>gi|325663374|ref|ZP_08151824.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470828|gb|EGC74058.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
4_1_37FAA]
Length = 240
Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+ E+ + FY + ++W++ +NL + E+ +H DS+ + + S+ ID+
Sbjct: 17 LDDRQKEQFDLFYEILVEWNEFMNLTGITEYEEVNEKHFVDSVSIVKAMDMKSVKSVIDV 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP- 136
G+G GFPGI I +E V L++S NK+ FL V++K +G + R ++
Sbjct: 77 GTGAGFPGIPLKIVFPELE---VVLLDSLNKRVKFLNAVIEKLQLKGIRAIHGRAEDYAK 133
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ +RA+A+L TL EY P++ +
Sbjct: 134 QQEYREQFDLCVSRAVANLATLSEYCLPYVKK 165
>gi|257866242|ref|ZP_05645895.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257873244|ref|ZP_05652897.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257875877|ref|ZP_05655530.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325567658|ref|ZP_08144325.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
gi|257800200|gb|EEV29228.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC30]
gi|257807408|gb|EEV36230.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC10]
gi|257810043|gb|EEV38863.1| ribosomal RNA small subunit methyltransferase G [Enterococcus
casseliflavus EC20]
gi|325159091|gb|EGC71237.1| glucose inhibited division protein B [Enterococcus casseliflavus
ATCC 12755]
Length = 238
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSI 74
N ++ E +EK ++ ++W++K+NL + + + +++H DS+ + S
Sbjct: 13 NGIVLTEEQMEKFAVYFERLVEWNQKMNLTAITEKSEVYLKHFYDSVSLAFETAFDPQSH 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+GSG GFP I I +E V +++S NK+ +FL+ +V ++ R +
Sbjct: 73 LCDVGSGAGFPSIPLKIVFPELE---VTIVDSLNKRITFLQTLVTDLQLENVHLYHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ PQ D ++ARA+A L+ L E P + +
Sbjct: 130 TFGQNPQFRGQFDYVTARAVARLNVLTELCVPLVKK 165
>gi|94993669|ref|YP_601767.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10750]
gi|166224621|sp|Q1J8D8|RSMG_STRPF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94547177|gb|ABF37223.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10750]
Length = 237
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++++ + E+ + ++ L ++W+ KINL + + + +++H DS+ L P
Sbjct: 13 DGFSLASKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|317472410|ref|ZP_07931735.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
gi|316900130|gb|EFV22119.1| 16S rRNA methyltransferase GidB [Anaerostipes sp. 3_2_56FAA]
Length = 236
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ L + E +Y L + +K +NL + + ED ++H DSL + +
Sbjct: 4 LREKAEELGIALTDRQLAQFEIYYELLTEKNKVMNLTAITEREDVILKHFVDSLALVKAE 63
Query: 70 --PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+D+G+G GFPGI I ++ + L++S NK+ FL+ V+
Sbjct: 64 CGFSSQKILDVGTGAGFPGIPLKIAFPGLK---IVLLDSLNKRVKFLQEVIDALELHDIT 120
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D++ +RA+A+L TL EY P++
Sbjct: 121 AVHGRAEDYARQKEYREQFDLVVSRAVANLSTLSEYCLPYVK 162
>gi|291561654|emb|CBL40453.1| 16S rRNA m(7)G-527 methyltransferase [butyrate-producing bacterium
SS3/4]
Length = 248
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L +S++ E+ +Y + ++ +K +NL + + + D +H DSL +
Sbjct: 8 LLDQGCADLEIELSKQQKEQFFKYYEMLIEKNKVMNLTAITELSDVIKKHFVDSLLLVLA 67
Query: 69 HPYPS---------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
P ID+G+G GFPGI I ++ + L++S NK+ FL V++
Sbjct: 68 APELGLKLDTSAKYRCIDVGTGAGFPGIPLKIAFPGLK---ITLLDSLNKRVGFLNEVIE 124
Query: 120 KTAA-RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ P+ D+ +RA+A++ TL EY P++ +
Sbjct: 125 TLGLTDINAVHGRAEDYGRDPKYREQYDLCVSRAVANMSTLSEYCIPFVKK 175
>gi|291541855|emb|CBL14965.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus bromii L2-63]
Length = 237
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDL 78
+ E L++ E ++ L ++W++K+NL + + ++H DSL ++ + ID+
Sbjct: 18 LDDEMLQRFEIYFKLLVEWNEKMNLTAITDEHGVAVKHFADSLTLYNFVDVKKNASIIDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ- 137
G+G GFPG++ I I+ + L++S NK+ +FL V+ T ++ R +E +
Sbjct: 78 GTGAGFPGVVLKIARPDIK---LTLLDSLNKRLTFLDTVLNDTGLDSELVHSRAEEGGKN 134
Query: 138 --MITTCDVISARALADLDTLLEYSFPWLY 165
D+ +RA+A L+ L EY P++
Sbjct: 135 KLYREKFDIAVSRAVARLNVLCEYCLPYVK 164
>gi|225028846|ref|ZP_03718038.1| hypothetical protein EUBHAL_03133 [Eubacterium hallii DSM 3353]
gi|224953842|gb|EEG35051.1| hypothetical protein EUBHAL_03133 [Eubacterium hallii DSM 3353]
Length = 238
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D L+A +++ + L + E FY + ++ +K +NL + + ++ +H DSL
Sbjct: 2 DFKEKLKARAEKEGISLTPKQLGQFELFYKMLIETNKSMNLTAITDEDEVIEKHFIDSLS 61
Query: 65 VFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ ID+G+G GFPGI I I+ L++S NK+ FL+ V +
Sbjct: 62 CRRVVDMSQIRTCIDVGTGAGFPGIPLKIVYPEID---FVLVDSLNKRVKFLKDVKEALG 118
Query: 123 ARG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
G + R ++ + + D+ +RA+A+L L EY P++
Sbjct: 119 LEGLEALHGRAEDLARDKSLRAAFDLCVSRAVANLSVLSEYCVPFVR 165
>gi|227823854|ref|YP_002827827.1| 16S rRNA methyltransferase GidB [Sinorhizobium fredii NGR234]
gi|254766900|sp|C3MB65|RSMG_RHISN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|227342856|gb|ACP27074.1| methyltransferase GidB [Sinorhizobium fredii NGR234]
Length = 214
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 87/149 (58%), Positives = 111/149 (74%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ VSRETL+KLE+F LF KW+K INLV+ ST+ED W RH DSL+VF+L P+P W
Sbjct: 9 MKALRVSRETLDKLEHFAGLFQKWAKSINLVAPSTLEDLWQRHFVDSLQVFRLSPFPKTW 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I LS G V+L+ES NKKA+FLR + +T ARG V R+++A
Sbjct: 69 VDLGSGGGFPGVITAICLSEHADGWVHLVESNNKKAAFLRVALNETGARGSVHPIRVEQA 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
P +I C+ ISARALADL LL+YS PW+
Sbjct: 129 PSVIPRCEAISARALADLTQLLDYSAPWM 157
>gi|313621875|gb|EFR92552.1| 16S rRNA methyltransferase GidB [Listeria innocua FSL J1-023]
Length = 238
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S + +++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHXXDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+G+G GFP + I ++ V++++S K+ +FL + +K
Sbjct: 62 AFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLK---VSIVDSLKKRMTFLDALAEKLGL 118
Query: 124 RGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A + L E P + +
Sbjct: 119 TDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLAELCMPLVKK 165
>gi|94989784|ref|YP_597884.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS10270]
gi|166224620|sp|Q1JII3|RSMG_STRPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94543292|gb|ABF33340.1| Methyltransferase gidB [Streptococcus pyogenes MGAS10270]
Length = 237
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ + +S + E+ + ++ L ++W+ KINL + + + +++H DS+ L P
Sbjct: 13 DGFLLSSKQKEQFDTYFKLLVEWNTKINLTAITEKNEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|15674490|ref|NP_268664.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes M1 GAS]
gi|71910092|ref|YP_281642.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS5005]
gi|20177901|sp|Q9A1D7|RSMG_STRP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13621590|gb|AAK33385.1| putative glucose-inhibited division protein [Streptococcus pyogenes
M1 GAS]
gi|71852874|gb|AAZ50897.1| glucose inhibited division protein B [Streptococcus pyogenes
MGAS5005]
Length = 237
Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ +++S + E+ + ++ ++W+ KINL + + + +++H DS+ L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKSLVEWNTKINLTAITEENEVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|317131000|ref|YP_004097282.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
gi|315475948|gb|ADU32551.1| methyltransferase GidB [Bacillus cellulosilyticus DSM 2522]
Length = 237
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
L +++ + L++ +Y L ++W++K+NL + + ED +++H DS+ V H +
Sbjct: 9 ALLERGIHLNTDQLKQFHDYYELLVEWNEKMNLTAITDKEDVYLKHFFDSVSVSFYHDFK 68
Query: 73 --SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
+D+G+G GFP I I ++ V +++S NK+ +FL + +K + + +
Sbjct: 69 EQKSIVDVGAGAGFPSIPLKICYPHLK---VTIVDSLNKRITFLNALAEKLSLKEVSFYH 125
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ + T D ARA+A L L E P + Q
Sbjct: 126 DRAEDFGKKKEHRETYDTALARAVARLPVLAELCMPLVKQ 165
>gi|241206938|ref|YP_002978034.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860828|gb|ACS58495.1| methyltransferase GidB [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 205
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/153 (54%), Positives = 114/153 (74%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ++P W
Sbjct: 3 LNGLRVSRETQERLQHFAVLFQKWAKAINLVAPSTLDDLWHRHIADSSQVFQINPQAISW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELKDGWVHLVESNHKKAAFLRTALRETNARGSVHILRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ CD ISARALADLD L+EYS PW+ K+
Sbjct: 123 YAGVGECDAISARALADLDGLIEYSAPWMLGKE 155
>gi|326202764|ref|ZP_08192631.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
gi|325986841|gb|EGD47670.1| methyltransferase GidB [Clostridium papyrosolvens DSM 2782]
Length = 241
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIWIDL 78
+S +E+ E + L +W+KKINL + + I+H DS+ + ID+
Sbjct: 21 EISDTQIEQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPHIGNEDIKIIDV 80
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA-- 135
G+G GFPGI I + L++S +K+ FL V+ K R ++
Sbjct: 81 GTGAGFPGIPLKIVNPK---NKITLLDSLDKRVKFLNEVINKVNITQISAIHGRAEDFGT 137
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
P D+ ARA+++L LLEY P++
Sbjct: 138 NPVYREKYDIAVARAVSNLPVLLEYCLPFIK 168
>gi|187933315|ref|YP_001887732.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
gi|238691667|sp|B2TRH8|RSMG_CLOBB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|187721468|gb|ACD22689.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B str.
Eklund 17B]
Length = 239
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
+S+E EK + L +W++K+NL + + E+ +H DS++ F+
Sbjct: 15 GLELSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEEIIKKHFIDSIKAFKRDEFKEAKTL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++
Sbjct: 75 IDVGTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAED 131
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ ++RA+A++ L E+ P++
Sbjct: 132 GARQKNLRESFDIATSRAVANMSVLSEFCLPYVK 165
>gi|94987908|ref|YP_596009.1| 16S rRNA methyltransferase GidB [Streptococcus pyogenes MGAS9429]
gi|166224619|sp|Q1JND4|RSMG_STRPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94541416|gb|ABF31465.1| methyltransferase [Streptococcus pyogenes MGAS9429]
Length = 237
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPS 73
+ +++S + E+ + ++ L ++W+ KINL + + + + +H DS+ L P
Sbjct: 13 DGFSLSSKQKEQFDTYFKLLVEWNTKINLTAITEENEVYPQHFYDSIAPILQAFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP + I ++E V +I+S NK+ SFL + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRISFLTLLAQELGLENVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKAFRGQFDVVTARAVARMQVLSELTIPFLK 165
>gi|158321888|ref|YP_001514395.1| methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
gi|166989742|sp|A8MKR7|RSMG_ALKOO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158142087|gb|ABW20399.1| methyltransferase GidB [Alkaliphilus oremlandii OhILAs]
Length = 239
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF- 66
IL+ ++ + +L + + L+W++K+NL + +D I+H DSL
Sbjct: 5 DILKEGAQGLNIEITDAQINQLIKYKDILLEWNQKMNLTAIEEEKDVMIKHFLDSLSCIQ 64
Query: 67 -QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ ID+G+G GFPG+ I L IE + L++S K+ SFL V +T +
Sbjct: 65 SKYLKREGKMIDVGTGAGFPGVPLKIALPGIE---LTLLDSLRKRISFLEEVCAETKLGQ 121
Query: 125 GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q D +RA+A L+ L+EY P++
Sbjct: 122 VDFVHGRAEDIGQSKDYREKYDYAVSRAVAALNVLVEYCLPFVK 165
>gi|218134366|ref|ZP_03463170.1| hypothetical protein BACPEC_02260 [Bacteroides pectinophilus ATCC
43243]
gi|217989751|gb|EEC55762.1| hypothetical protein BACPEC_02260 [Bacteroides pectinophilus ATCC
43243]
Length = 248
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS---- 73
+ E L+ +Y L ++W+K +NL + + +D +++H DSL V +
Sbjct: 15 NVELDDSMEEALQKYYELLVEWNKVMNLTAITEKDDVYVKHFLDSLAVKTVFDDKEYAKM 74
Query: 74 --------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPGI I S++ V L++S NK+ FL V+
Sbjct: 75 LPDTNTAIKVIDIGTGAGFPGIPLKIAFPSVK---VTLLDSLNKRIKFLNEVISTVGLND 131
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P + D+ +RA+A L TL EY P++
Sbjct: 132 IEAIHGRAEDYAREPDYRESYDLCVSRAVATLSTLAEYCLPYVK 175
>gi|306825496|ref|ZP_07458836.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432434|gb|EFM35410.1| 16S rRNA methyltransferase GidB [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 245
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+S + + E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 21 QNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIQNENI 80
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 81 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELNLDGVHFYHGRA 137
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 138 EDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLK 173
>gi|169351490|ref|ZP_02868428.1| hypothetical protein CLOSPI_02270 [Clostridium spiroforme DSM 1552]
gi|169291712|gb|EDS73845.1| hypothetical protein CLOSPI_02270 [Clostridium spiroforme DSM 1552]
Length = 233
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLG 79
+S + +E+ + ++ L ++W++K+NL + + E +++H DS+ + F +D+G
Sbjct: 17 LSDKQIEQFDKYFKLLVEWNEKMNLTAITDEESVYLKHFYDSITIAFDFEFASQSIVDVG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQ 137
+G GFP I I ++ V +++S K+ +FL ++ K + R +E A +
Sbjct: 77 AGAGFPSIPLKIIYPDLK---VTIVDSLTKRITFLNHLFGALELTNCKAISARAEEYAKE 133
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
CDV+ ARA+A L+ L E P +
Sbjct: 134 NREKCDVVMARAVARLNILDELCLPLVK 161
>gi|188588844|ref|YP_001922715.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
gi|226796820|sp|B2V1U8|RSMG_CLOBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188499125|gb|ACD52261.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E3 str.
Alaska E43]
Length = 239
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
+S+E EK + L +W++K+NL + + ED +H DS++ F+
Sbjct: 15 GLELSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEDIIKKHFIDSIKAFKRDEFKEAKTL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++
Sbjct: 75 IDVGTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAED 131
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ ++RA+A++ L E+ P++
Sbjct: 132 GARQKNLRESFDIATSRAVANMSVLSEFCLPYVK 165
>gi|150019905|ref|YP_001312159.1| 16S rRNA methyltransferase GidB [Clostridium beijerinckii NCIMB
8052]
gi|189039494|sp|A6M3M3|RSMG_CLOB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149906370|gb|ABR37203.1| methyltransferase GidB [Clostridium beijerinckii NCIMB 8052]
Length = 239
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MK+ D ++ + +S+E EK + L +W++KINL + E+ +H
Sbjct: 1 MKFYD---LMSKSAEDVGLQLSKEQYEKFIDYMKLLQEWNEKINLTAIIDDEEIIKKHFI 57
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS++ F+ + S ID+G+G GFPG+ +I + + V L++S NK+ SFL V+
Sbjct: 58 DSIKAFKRDEFKIASSLIDVGTGAGFPGLPIAIMRADLN---VTLLDSLNKRVSFLNTVI 114
Query: 119 QKTAARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ A R ++ ++ D+ ++RA+A++ L E P++
Sbjct: 115 NRIGASNVTTIHSRAEDGAKDIKLRENFDIATSRAVANMSVLSELCLPYVK 165
>gi|238926046|ref|YP_002939564.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|238877723|gb|ACR77430.1| glucose-inhibited division protein B [Eubacterium rectale ATCC
33656]
gi|291526553|emb|CBK92140.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale DSM
17629]
Length = 237
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDL 78
++ LE+ E +Y + ++ +K +NL + + ++ +H DSL + ID+
Sbjct: 19 LNNSQLEQFELYYDMLIEKNKVMNLTAITDFDEVIEKHFLDSLFLCHTLDLNAEKNIIDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
G+G GFPGI I ++ + L++S NK+ FL V++ + + R ++
Sbjct: 79 GTGAGFPGIPLKIAFPQLK---ITLLDSLNKRVGFLNEVIEALELKDIEAVHGRAEDFAR 135
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+A+L TL EY P++
Sbjct: 136 DKEHRAAYDICVSRAVANLSTLSEYCLPFVK 166
>gi|251780390|ref|ZP_04823310.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084705|gb|EES50595.1| 16S rRNA methyltransferase GidB [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 239
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIW 75
+S+E EK + L +W++K+NL + + ED +H DS++ F+ +
Sbjct: 15 GLELSKEQYEKFIIYKNLLQEWNEKVNLTAITEDEDIIKKHFIDSIKAFKRDEFKKAKTL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI +I +I+ V L++S NK+ +FL V +K + V R ++
Sbjct: 75 IDVGTGAGFPGIPVAIMNENIQ---VTLLDSLNKRVNFLNLVTEKLGLKNVVAIHSRAED 131
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ ++RA+A++ L E+ P++
Sbjct: 132 GARQKNLRESFDIATSRAVANMSVLSEFCLPYVK 165
>gi|291529195|emb|CBK94781.1| 16S rRNA m(7)G-527 methyltransferase [Eubacterium rectale M104/1]
Length = 237
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDL 78
++ LE+ E +Y + ++ +K +NL + + ++ +H DSL + ID+
Sbjct: 19 LNNSQLEQFELYYDMLIEKNKVMNLTAITDFDEVIEKHFLDSLFLCHTLDLNAEKNIIDV 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
G+G GFPGI I ++ + L++S NK+ FL V++ + + R ++
Sbjct: 79 GTGAGFPGIPLKIAFPQLK---ITLLDSLNKRVGFLNEVIEALELKDIEAVHGRAEDFAR 135
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+ +RA+A+L TL EY P++
Sbjct: 136 DKEHRAAYDICVSRAVANLSTLSEYCLPFVK 166
>gi|331092104|ref|ZP_08340935.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402305|gb|EGG81876.1| 16S rRNA methyltransferase GidB [Lachnospiraceae bacterium
2_1_46FAA]
Length = 237
Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ I ++ E+ FY + ++W+ +NL + E+ +H DS+ +
Sbjct: 1 MSKIFEEKLAHLGIVLNDTQKEQFHQFYEILVEWNSFMNLTGITEYEEVNEKHFVDSVSL 60
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPGI I +E + L++S NK+ FL V+++
Sbjct: 61 IKAVDLSKVKTVIDVGTGAGFPGIPLKIAFPHLE---IVLLDSLNKRVKFLNEVIEQLGL 117
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
G + R ++ + D+ +RA+A+L TL EY P++
Sbjct: 118 TGIRAIHGRAEDYAKQKEYREQFDLCVSRAVANLSTLSEYCIPYV 162
>gi|220930842|ref|YP_002507751.1| methyltransferase GidB [Clostridium cellulolyticum H10]
gi|220001170|gb|ACL77771.1| methyltransferase GidB [Clostridium cellulolyticum H10]
Length = 241
Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDL 78
++ +++ E + L +W+KKINL + + I+H DS+ + + ID+
Sbjct: 21 EITDIQIKQFEKYMELLKEWNKKINLTAIEDDREIVIKHFIDSISIVPYVKNENLKIIDI 80
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA-- 135
G+G GFPGI I V L++S +K+ FL V+ R ++
Sbjct: 81 GTGAGFPGIPLKIVNPQ---NKVTLLDSLDKRVKFLNEVINGINITQISAIHGRAEDFGT 137
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
P D+ ARA+A+L LLEY P++
Sbjct: 138 NPVYREKYDIAVARAVANLPVLLEYCLPFVK 168
>gi|319745619|gb|EFV97920.1| glucose inhibited division protein B [Streptococcus agalactiae ATCC
13813]
Length = 237
Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ + ++ E ++ L ++W++KINL + + E +++H DS+ + P
Sbjct: 13 HGITLTDKQKKQFETYFRLLVEWNEKINLTAITDKEGVYLKHFYDSIAPILQGYIDNSPL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G GFP I I I+ + +I+S NK+ +FL + + G F R
Sbjct: 73 SILDIGAGAGFPSIPMKILYPEID---ITIIDSLNKRINFLNILANELELSGVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKVFRAKFDIVTARAVARMQVLAELTIPFLK 165
>gi|322387493|ref|ZP_08061103.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
gi|321142022|gb|EFX37517.1| glucose inhibited division protein B [Streptococcus infantis ATCC
700779]
Length = 245
Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
N++ + + E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 21 QNINLTDQQKAQFERYFELLVEWNEKINLTAITEKEEVYLKHFYDSIAPILQGLIENQEI 80
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + +K G F R
Sbjct: 81 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAEKLDLEGVHFYHGRA 137
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 138 EDFAQDKNFRAQFDIVTARAVARMQVLSELTIPYLK 173
>gi|15901145|ref|NP_345749.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae TIGR4]
gi|111658512|ref|ZP_01409178.1| hypothetical protein SpneT_02000339 [Streptococcus pneumoniae
TIGR4]
gi|148998925|ref|ZP_01826360.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|149019281|ref|ZP_01834643.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|168484499|ref|ZP_02709451.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|168487454|ref|ZP_02711962.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|168575740|ref|ZP_02721655.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194397570|ref|YP_002037888.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225859081|ref|YP_002740591.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225860884|ref|YP_002742393.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230786|ref|ZP_06964467.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254276|ref|ZP_06977862.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307067934|ref|YP_003876900.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|20177896|sp|Q97QD4|RSMG_STRPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797832|sp|B5E522|RSMG_STRP4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766904|sp|C1C7R5|RSMG_STRP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766909|sp|C1CR21|RSMG_STRZT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14972770|gb|AAK75389.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TIGR4]
gi|147755235|gb|EDK62287.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP11-BS70]
gi|147931151|gb|EDK82130.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP23-BS72]
gi|172042251|gb|EDT50297.1| methyltransferase GidB [Streptococcus pneumoniae CDC1873-00]
gi|183569712|gb|EDT90240.1| methyltransferase GidB [Streptococcus pneumoniae CDC1087-00]
gi|183578267|gb|EDT98795.1| methyltransferase GidB [Streptococcus pneumoniae MLV-016]
gi|194357237|gb|ACF55685.1| methyltransferase GidB [Streptococcus pneumoniae G54]
gi|225722107|gb|ACO17961.1| methyltransferase GidB [Streptococcus pneumoniae 70585]
gi|225726989|gb|ACO22840.1| methyltransferase GidB [Streptococcus pneumoniae Taiwan19F-14]
gi|301794360|emb|CBW36788.1| methyltransferase GidB [Streptococcus pneumoniae INV104]
gi|306409471|gb|ADM84898.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Streptococcus pneumoniae
AP200]
gi|327389519|gb|EGE87864.1| methyltransferase GidB [Streptococcus pneumoniae GA04375]
gi|332200730|gb|EGJ14802.1| methyltransferase GidB [Streptococcus pneumoniae GA41317]
gi|332201749|gb|EGJ15819.1| methyltransferase GidB [Streptococcus pneumoniae GA47368]
Length = 237
Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|251800243|ref|YP_003014974.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
gi|247547869|gb|ACT04888.1| methyltransferase GidB [Paenibacillus sp. JDR-2]
Length = 240
Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSI 74
N +S + LE+ + ++ L ++W++K+NL + + + +H DS+ +
Sbjct: 15 NGILLSPKQLEQFDSYHRLLVEWNEKMNLTGITERDAVFEKHFYDSISLSFFVNMKEVGS 74
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQ 133
D+GSG GFP I I ++ V +++S NK+ FL ++VQ+ R +
Sbjct: 75 IADIGSGAGFPSIPLKICYPHLK---VVIVDSLNKRIQFLNHLVQELGLENVNCVHGRAE 131
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ P + D+++ARA+A L+ L E+ P+ +
Sbjct: 132 DIARMPAYRDSFDLVTARAVARLNVLNEFCLPFTRK 167
>gi|327191202|gb|EGE58245.1| glucose-inhibited division protein B [Rhizobium etli CNPAF512]
Length = 205
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 82/153 (53%), Positives = 112/153 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETRARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADL+ L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLNGLIGYAAPWMLGKE 155
>gi|298502717|ref|YP_003724657.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
gi|298238312|gb|ADI69443.1| glucose-inhibited division protein B [Streptococcus pneumoniae
TCH8431/19A]
Length = 245
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 21 QNLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 80
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 81 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRA 137
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 138 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 173
>gi|148994096|ref|ZP_01823436.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|168489112|ref|ZP_02713311.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|168493205|ref|ZP_02717348.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|221231973|ref|YP_002511125.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225854749|ref|YP_002736261.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|254766905|sp|B8ZJU9|RSMG_STRPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766907|sp|C1CEP0|RSMG_STRZJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147927449|gb|EDK78478.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP9-BS68]
gi|183572467|gb|EDT92995.1| methyltransferase GidB [Streptococcus pneumoniae SP195]
gi|183576802|gb|EDT97330.1| methyltransferase GidB [Streptococcus pneumoniae CDC3059-06]
gi|220674433|emb|CAR68986.1| methyltransferase GidB [Streptococcus pneumoniae ATCC 700669]
gi|225723304|gb|ACO19157.1| methyltransferase GidB [Streptococcus pneumoniae JJA]
gi|332073624|gb|EGI84103.1| methyltransferase GidB [Streptococcus pneumoniae GA17570]
gi|332203134|gb|EGJ17202.1| methyltransferase GidB [Streptococcus pneumoniae GA47901]
Length = 237
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|229014648|ref|ZP_04171762.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
gi|229065141|ref|ZP_04200434.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|229136307|ref|ZP_04265054.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|229170185|ref|ZP_04297871.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|228613286|gb|EEK70425.1| Methyltransferase GidB [Bacillus cereus AH621]
gi|228647179|gb|EEL03267.1| Methyltransferase GidB [Bacillus cereus BDRD-ST196]
gi|228716170|gb|EEL67889.1| Methyltransferase GidB [Bacillus cereus AH603]
gi|228746659|gb|EEL96548.1| Methyltransferase GidB [Bacillus mycoides DSM 2048]
Length = 239
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
++S LE+ ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGISLSSRQLEQFGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSVTAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|317133702|ref|YP_004093016.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
gi|315471681|gb|ADU28285.1| methyltransferase GidB [Ethanoligenens harbinense YUAN-3]
Length = 237
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
++ L +L + L ++W++KINL + + ++ ++H DSL + P ++
Sbjct: 14 NLPLTDGQLGQLNQYARLLVEWNEKINLTAITDRQEIAVKHFLDSLSLLHFVPPEQNAVV 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
+D+GSG GFPG++ I + + ++ K+ FL + + V R +E
Sbjct: 74 LDVGSGAGFPGMVLRIARPDLR---LTCMDGTQKRIHFLSELAAALGLQEVVCLHARAEE 130
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A P + T D ++ARA+A+L L EY P++
Sbjct: 131 AGRDPALRETFDYVTARAVANLHALAEYCLPFVKP 165
>gi|15896963|ref|NP_350312.1| 16S rRNA methyltransferase GidB [Clostridium acetobutylicum ATCC
824]
gi|20177895|sp|Q97CW4|RSMG_CLOAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15026839|gb|AAK81652.1|AE007868_8 Glucose-inhibited division protein, GIDB
(S-adenosylmethionine-dependent methyltransferase)
[Clostridium acetobutylicum ATCC 824]
gi|325511140|gb|ADZ22776.1| glucose-inhibited division protein B [Clostridium acetobutylicum EA
2018]
Length = 239
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MKY D I+ + E K + L +W+K +NL S E+ +H
Sbjct: 1 MKYFD---IMSLECKKIGIEFTEEKYGKFMRYKELLQEWNKVMNLTSIVDDEEIVKKHFI 57
Query: 61 DSLRVF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS+++F + ID+G+G GFPG+ +I IE V L++S K+ +FL V+
Sbjct: 58 DSIKIFECEHIVKAKRIIDVGTGAGFPGLPIAIMNDDIE---VVLLDSLQKRVNFLNEVI 114
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
++ + R ++ DV +RA+A++ L E+ P+
Sbjct: 115 KELNLKNISTVHGRAEDFGVDKDYREKFDVAVSRAVANMAVLSEFCLPF 163
>gi|116617470|ref|YP_817841.1| cell division SAM-dependent methyltransferase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|122272329|sp|Q03ZA4|RSMG_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116096317|gb|ABJ61468.1| 16S rRNA m(7)G-527 methyltransferase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 239
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPS 73
++ + + + E +Y L + ++ +NL + + +D +++H DSL V +L S
Sbjct: 14 GITLTTQQVRQFERYYELLVATNEHVNLTAITEKKDVYLKHFYDSLTVAMYEQKLKSSES 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFP + I ++ + ++++ K+ +FL+ VV G ++ R
Sbjct: 74 TLIDIGTGAGFPSLPLKIAFPDLK---ITMVDALKKRVNFLQEVVDTLDLTGVEIVHGRA 130
Query: 133 QE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
++ P+ D +ARA+A L EY+ P++
Sbjct: 131 EDIGQNPKYRENFDYATARAVARTSVLAEYTLPFVK 166
>gi|227432682|ref|ZP_03914655.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227351564|gb|EEJ41817.1| glucose-inhibited division protein B [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 239
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPS 73
++ + + + E +Y L + ++ +NL + + +D +++H DSL V +L S
Sbjct: 14 GITLTTQQVRQFERYYELLVATNEHVNLTAITEKKDVYLKHFYDSLTVAMYEQKLKSSES 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFP + I ++ + ++++ K+ +FL+ VV G ++ R
Sbjct: 74 TLIDIGTGAGFPSLPLKIAFPDLK---ITMVDALKKRVNFLQEVVDTLDLTGVEIVHGRA 130
Query: 133 QE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
++ P+ D +ARA+A L EY+ P++
Sbjct: 131 EDIGQNPKYRENFDYATARAVARTSVLAEYTLPFVK 166
>gi|170016607|ref|YP_001727526.1| methyltransferase GidB [Leuconostoc citreum KM20]
gi|193806446|sp|B1MX30|RSMG_LEUCK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169803464|gb|ACA82082.1| Methyltransferase GidB [Leuconostoc citreum KM20]
Length = 239
Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPS 73
++ + +E+ + ++ L ++ +K+ NL + + +D +++H DSL V L S
Sbjct: 14 GITLTEQQIEQFQRYFELLVEANKQFNLTAITDEKDVYLKHFYDSLTVAIYVKALQHQSS 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
ID+G+G GFP + I ++ + ++++ K+ FL+ VV + + R
Sbjct: 74 TLIDVGTGAGFPSLPLKIAFPQLK---ITMVDALQKRVRFLQDVVDTLDLKNVSIVHGRA 130
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D +ARALA L EY+ P++
Sbjct: 131 EDIGQNVAYREQFDFATARALARTSVLAEYTLPFVK 166
>gi|163943162|ref|YP_001648046.1| glucose-inhibited division protein B [Bacillus weihenstephanensis
KBAB4]
gi|229564286|sp|A9VTL8|RSMG_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163865359|gb|ABY46418.1| methyltransferase GidB [Bacillus weihenstephanensis KBAB4]
Length = 239
Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
++S LE+ ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGISLSSRQLEQFGIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSVTAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VKIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVREAYDIVMARAVARLSVLSELCLPLVK 164
>gi|218463269|ref|ZP_03503360.1| glucose-inhibited division protein B [Rhizobium etli Kim 5]
Length = 205
Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats.
Identities = 82/152 (53%), Positives = 112/152 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ++P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKAINLVAPSTLDDLWRRHIADSSQIFQIYPEPVRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
I C ISARALADLD L+ Y+ PW+ K
Sbjct: 123 HAEIGECGAISARALADLDGLIGYAAPWMLGK 154
>gi|332523926|ref|ZP_08400178.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
gi|332315190|gb|EGJ28175.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
porcinus str. Jelinkova 176]
Length = 237
Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
Y+++++ ++ ++ ++W++KINL + + D +++H DS+ + P
Sbjct: 14 GYDLTQKQKDQFNTYFNTLIEWNQKINLTAITEKNDVYLKHFYDSIAPILQGYIPNQPIQ 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL ++ Q+ G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKIVFPQLQ---VTIIDSLNKRITFLAHLTQELGLDGVAFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q + D+++ARA+A + L E + P+L
Sbjct: 131 DFGQDKDFRSKYDLVTARAVARMQILSELTIPFLK 165
>gi|241889363|ref|ZP_04776664.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
gi|241863906|gb|EER68287.1| 16S rRNA methyltransferase GidB [Gemella haemolysans ATCC 10379]
Length = 237
Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
+S ++ +Y L ++W++KINL + + ++F+ +H DS+ + Y +
Sbjct: 15 GIELSELQKDQYSKYYDLVVEWNQKINLTAITEEDEFYTKHFFDSISLAFYKDYSNIESI 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
D+GSG GFP I I +++ V +++S NK+ FL V + R +E
Sbjct: 75 CDVGSGAGFPSIPLKILYPNLK---VTIVDSLNKRIKFLNLVKDELGLTDCNFVHARAEE 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q + ++++ARA+A L+ L E P + +
Sbjct: 132 FGQNKEYRESFEIVTARAVARLNILAELCLPLVKK 166
>gi|168214840|ref|ZP_02640465.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
gi|170713738|gb|EDT25920.1| methyltransferase GidB [Clostridium perfringens CPE str. F4969]
Length = 239
Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F+ + ID+G+G GFPG+ +I +E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMRGDVE---VTLLDSLNKRINFLNEVV 114
Query: 119 QKTAARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + + R ++ ++ + D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVETIHSRAEDGARKKELRESFDIATSRAVANMCVLSEFCIPYVK 165
>gi|56965872|ref|YP_177606.1| 16S rRNA methyltransferase GidB [Bacillus clausii KSM-K16]
gi|81600611|sp|Q5WAG5|RSMG_BACSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56912118|dbj|BAD66646.1| glucose inhibited division protein B [Bacillus clausii KSM-K16]
Length = 237
Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLG 79
+S E+ + ++ L ++W++K+NL + + +D +++H DS+ +P+ +D+G
Sbjct: 17 LSSTQHEQFKRYFELLVEWNEKMNLTAITEKKDVYLKHFYDSITPSFYYPFTDQKIVDIG 76
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ---EA 135
+G GFP + I ++ +++I+S NK+ FL ++ + G F R + ++
Sbjct: 77 AGAGFPSLPLKILYPDLQ---ISIIDSLNKRIGFLTHLANELELTGVSFYHDRAELAGKS 133
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
DV ARA+A + L E P++
Sbjct: 134 KHHREIYDVAIARAVARMSVLSELCLPFVK 163
>gi|313885633|ref|ZP_07819383.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619363|gb|EFR30802.1| 16S rRNA methyltransferase GidB [Eremococcus coleocola
ACS-139-V-Col8]
Length = 239
Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPS 73
N+ +++ E +Y ++W++KINL + + ++ +++H DSL L
Sbjct: 13 KGINLDSRQIQQFESYYQFLVEWNQKINLTAITEQKEVYLKHFYDSLAPLWLTDKIQADK 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRI 132
ID+G+G GFP I +I + V +++S NK+ FL +V+ + R
Sbjct: 73 ALIDIGAGAGFPSIPLAIAQPGLR---VTIVDSLNKRIKFLEVLVEALGLDQVQALHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ Q D+++ARA+A L+ L EY P+ +
Sbjct: 130 EDLGQDKRYRQNFDLVTARAVAQLNVLAEYCLPFAKK 166
>gi|317496585|ref|ZP_07954933.1| glucose inhibited division protein [Gemella moribillum M424]
gi|316913292|gb|EFV34790.1| glucose inhibited division protein [Gemella moribillum M424]
Length = 237
Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+S ++ E ++ L ++W++KINL + + E+F+ +H DS+ + Y + D+
Sbjct: 18 LSDIQKKQYEKYFELVVEWNQKINLTAITEEEEFYTKHFYDSISLSFYRDYSKVSNICDV 77
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
GSG GFP I I +E V +++S NK+ FL + ++ R +E Q
Sbjct: 78 GSGAGFPSIPLKILYPHLE---VTIVDSLNKRIKFLNLLQEELGLTNCNFIHARAEEVGQ 134
Query: 138 ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++++ARA+A L+ L+E P + +
Sbjct: 135 DKNFRESFEIVTARAVARLNVLVELCLPLVKK 166
>gi|168491204|ref|ZP_02715347.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
gi|183574346|gb|EDT94874.1| methyltransferase GidB [Streptococcus pneumoniae CDC0288-04]
Length = 237
Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G ++ R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHLYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|251781805|ref|YP_002996107.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390434|dbj|BAH80893.1| glucose-inhibited division protein B [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|323126617|gb|ADX23914.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 237
Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ + ++ + E+ + ++ L ++W+ KINL + + D +++H DS+ L P
Sbjct: 13 DGFPLTMKQKEQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++E V +I+S NK+ +FL ++ + A + F R
Sbjct: 73 RLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRIAFLTHLAESLALDKVHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKDFRAQFDVVTARAVARMQVLAELTIPFLK 165
>gi|229106076|ref|ZP_04236689.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
gi|228677342|gb|EEL31606.1| Methyltransferase GidB [Bacillus cereus Rock3-28]
Length = 239
Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--I 74
+S LE+ + ++ ++W++K+NL + + E+ +++H DS+ + +
Sbjct: 13 KGITLSSRQLEQFKIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFYYDFSKPFS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
D+G+G GFP I I ++ V +++S K+ +FL ++ QK F R +
Sbjct: 73 ICDVGAGAGFPSIPLKICFPHLK---VTIVDSLQKRINFLNHLAQKLELSDVAFCHDRAE 129
Query: 134 ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + +++ ARA+A L L E P +
Sbjct: 130 TFGKKEGVRESYEIVMARAVARLSVLSELCLPLVK 164
>gi|293365141|ref|ZP_06611858.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|291316591|gb|EFE57027.1| 16S rRNA methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 245
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ + +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 8 TMKPETFYSLLAEHNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSI 67
Query: 64 RVF---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ +D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 68 APILQGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQE 124
Query: 121 TAARGKVF-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
G F R ++ Q DV++ARA+A + L E + P+L
Sbjct: 125 LDLEGVHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLK 173
>gi|116254461|ref|YP_770299.1| 16S rRNA methyltransferase GidB [Rhizobium leguminosarum bv. viciae
3841]
gi|166224606|sp|Q1MA20|RSMG_RHIL3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115259109|emb|CAK10220.1| putative glucose inhibited division protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 205
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 84/153 (54%), Positives = 114/153 (74%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV+ ST++D W RH+ DS +VFQ+HP P W
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKAINLVAPSTLDDLWHRHIADSSQVFQIHPQPITW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++GG V+L+ES +KKA+FLR +++T ARG V + RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQGGWVHLVESNHKKAAFLRTALRETNARGSVHSIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ C ISARAL DLD L+ YS PW+ K+
Sbjct: 123 YTEVRECSAISARALTDLDGLIGYSSPWMLGKE 155
>gi|116516833|ref|YP_816609.1| glucose-inhibited division protein B [Streptococcus pneumoniae D39]
gi|148985185|ref|ZP_01818424.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|148989310|ref|ZP_01820690.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|149002659|ref|ZP_01827591.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|149007047|ref|ZP_01830716.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|149012342|ref|ZP_01833411.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|169834139|ref|YP_001694710.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae
Hungary19A-6]
gi|225856947|ref|YP_002738458.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|237649984|ref|ZP_04524236.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974]
gi|237821110|ref|ZP_04596955.1| glucose-inhibited division protein B [Streptococcus pneumoniae CCRI
1974M2]
gi|303261605|ref|ZP_07347552.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|303267143|ref|ZP_07353011.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|303268436|ref|ZP_07354231.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|307127124|ref|YP_003879155.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|29336662|sp|Q8DPH3|RSMG_STRR6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122278505|sp|Q04K39|RSMG_STRP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766908|sp|C1CL20|RSMG_STRZP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116077409|gb|ABJ55129.1| methyltransferase GidB [Streptococcus pneumoniae D39]
gi|147759270|gb|EDK66263.1| methyltransferase GidB [Streptococcus pneumoniae SP14-BS69]
gi|147761351|gb|EDK68317.1| methyltransferase GidB [Streptococcus pneumoniae SP18-BS74]
gi|147763668|gb|EDK70603.1| methyltransferase GidB [Streptococcus pneumoniae SP19-BS75]
gi|147922630|gb|EDK73748.1| methyltransferase GidB [Streptococcus pneumoniae SP3-BS71]
gi|147925288|gb|EDK76367.1| methyltransferase GidB [Streptococcus pneumoniae SP6-BS73]
gi|168996641|gb|ACA37253.1| methyltransferase GidB [Streptococcus pneumoniae Hungary19A-6]
gi|225724396|gb|ACO20248.1| methyltransferase GidB [Streptococcus pneumoniae P1031]
gi|301800198|emb|CBW32806.1| methyltransferase GidB [Streptococcus pneumoniae OXC141]
gi|301802074|emb|CBW34807.1| methyltransferase GidB [Streptococcus pneumoniae INV200]
gi|302637185|gb|EFL67673.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP14-BS292]
gi|302642042|gb|EFL72394.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS458]
gi|302643304|gb|EFL73583.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS457]
gi|306484186|gb|ADM91055.1| methyltransferase GidB [Streptococcus pneumoniae 670-6B]
gi|332074898|gb|EGI85370.1| methyltransferase GidB [Streptococcus pneumoniae GA41301]
Length = 237
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLPLSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|218516416|ref|ZP_03513256.1| glucose-inhibited division protein B [Rhizobium etli 8C-3]
Length = 205
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 82/153 (53%), Positives = 111/153 (72%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FL +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLMTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADLD L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLDGLIGYAAPWMLGKE 155
>gi|86359699|ref|YP_471591.1| glucose-inhibited division protein B [Rhizobium etli CFN 42]
gi|123510387|sp|Q2K2S2|RSMG_RHIEC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86283801|gb|ABC92864.1| glucose inhibited division protein B [Rhizobium etli CFN 42]
Length = 205
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 84/153 (54%), Positives = 113/153 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++ W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQGRLQHFALLFQKWAKTINLVAPSTLDALWHRHIADSSQIFQICPRPVTW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++GG V+L+ES +KKA+FLR +++T ARG V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIFLAELQGGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
I CD ISARALADLD L+ YS PW+ K+
Sbjct: 123 SAEIGDCDAISARALADLDGLIAYSAPWMLGKE 155
>gi|307703679|ref|ZP_07640620.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
gi|307622514|gb|EFO01510.1| methyltransferase GidB [Streptococcus oralis ATCC 35037]
Length = 237
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ +S + + E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 13 HNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLISNETI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLEGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLK 165
>gi|15903207|ref|NP_358757.1| 16S rRNA methyltransferase GidB [Streptococcus pneumoniae R6]
gi|182684218|ref|YP_001835965.1| glucose-inhibited division protein B [Streptococcus pneumoniae
CGSP14]
gi|15458795|gb|AAK99967.1| Glucose inhibited division protein B [Streptococcus pneumoniae R6]
gi|182629552|gb|ACB90500.1| glucose-inhibited division protein B [Streptococcus pneumoniae
CGSP14]
Length = 245
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 21 QNLPLSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 80
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 81 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRA 137
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 138 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 173
>gi|229826127|ref|ZP_04452196.1| hypothetical protein GCWU000182_01492 [Abiotrophia defectiva ATCC
49176]
gi|229789700|gb|EEP25814.1| hypothetical protein GCWU000182_01492 [Abiotrophia defectiva ATCC
49176]
Length = 239
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ S++ ++ E +KL FY + + +K +NL + + E+F I+H DSL
Sbjct: 2 EDKSLIIKKLENEGITITSEQCDKLYRFYEMVTEKNKVMNLTAITDYEEFVIKHFVDSLM 61
Query: 65 VFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ ++ P +D+G+G GFPG+ I + + V L++S NK+ +FL V+++
Sbjct: 62 IAKVMDMKAPMTVLDIGTGAGFPGVPIKIVYPATK---VLLLDSLNKRLNFLNEVIEELG 118
Query: 123 ARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + D+ +RA++ L TL EY P++
Sbjct: 119 LKDITTIHSRAEELQAKGEYRENFDLCVSRAVSALPTLSEYCLPYVK 165
>gi|332074619|gb|EGI85093.1| methyltransferase GidB [Streptococcus pneumoniae GA17545]
Length = 254
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLPLSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|322374558|ref|ZP_08049072.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
gi|321280058|gb|EFX57097.1| 16S rRNA methyltransferase GidB [Streptococcus sp. C300]
Length = 237
Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+S + + E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 13 QNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLISNETI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLK 165
>gi|315612910|ref|ZP_07887821.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
gi|315315020|gb|EFU63061.1| glucose inhibited division protein B [Streptococcus sanguinis ATCC
49296]
Length = 245
Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 8 TMKPETFYSLLAEQNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSI 67
Query: 64 RVF---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ +D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 68 APILQGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQE 124
Query: 121 TAARGKVF-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
G F R ++ Q DV++ARA+A + L E + P+L
Sbjct: 125 LDLDGVHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLK 173
>gi|303254470|ref|ZP_07340575.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|303258921|ref|ZP_07344900.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|303264274|ref|ZP_07350194.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
gi|302598556|gb|EFL65597.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS455]
gi|302639864|gb|EFL70320.1| glucose-inhibited division protein B [Streptococcus pneumoniae
SP-BS293]
gi|302646086|gb|EFL76313.1| glucose-inhibited division protein B [Streptococcus pneumoniae
BS397]
Length = 237
Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLPLSDQQKEQFECYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRINFLQLLAQELDLNGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|331700959|ref|YP_004397918.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
gi|329128302|gb|AEB72855.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
buchneri NRRL B-30929]
Length = 245
Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+N + L V+ + +++ + ++ L + ++ +NL S + + +++H DS+
Sbjct: 2 NNDQFKKALLDKGIEVTDQQMDQFDAYFKLLVAVNEHVNLTSITEKPEVYLKHFYDSITP 61
Query: 66 FQLHPY----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP + I ++ V +++S NK+ +FL +V++
Sbjct: 62 AFFVSQIKTAPLSICDVGAGAGFPSLPLKILFPQLK---VTIVDSLNKRINFLTTLVKEL 118
Query: 122 AARG-KVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPW 163
G ++F R +E + D+++ARA+A L L E P
Sbjct: 119 NLTGVELFHARAEEFGGKRSEHREQYDLVTARAVARLTVLSELCLPL 165
>gi|307704983|ref|ZP_07641870.1| methyltransferase GidB [Streptococcus mitis SK597]
gi|307621434|gb|EFO00484.1| methyltransferase GidB [Streptococcus mitis SK597]
Length = 237
Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+S + ++ E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 13 QNLPLSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNENI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|306829253|ref|ZP_07462443.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
gi|304428339|gb|EFM31429.1| 16S rRNA methyltransferase GidB [Streptococcus mitis ATCC 6249]
Length = 245
Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ + +S + + E ++ L ++W++KINL + + E+ +++H DS+
Sbjct: 8 TMKPETFYSLLVEQNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSI 67
Query: 64 RVF---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ +D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+
Sbjct: 68 APILQGLISNETIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQE 124
Query: 121 TAARGKVF-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
G F R ++ Q D+++ARA+A + L E + P+L
Sbjct: 125 LNLDGVHFYHGRAEDFAQDKNFRAQFDMVTARAVARMQVLSELTIPYLK 173
>gi|310659879|ref|YP_003937600.1| glucose-inhibited cell-division methyltransferase [Clostridium
sticklandii DSM 519]
gi|308826657|emb|CBH22695.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Clostridium
sticklandii]
Length = 240
Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ + IL +++ + + L+++K +NL + E+ + +H DSL
Sbjct: 2 ELDKILSQGLSSWNIDITENQQNNFKIYMDTLLEYNKVMNLTAIEDPEEIYTKHFLDSLS 61
Query: 65 VF---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+L ID+G+G GFP I I I+ + +++S NK+ +FL+ V +
Sbjct: 62 CLLVDELKTVGLKAIDVGTGAGFPSIPIKIMRPDIK---MTMLDSLNKRINFLKEVGARV 118
Query: 122 AARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++A P+ D++ +RA+A L LLEY P+L +
Sbjct: 119 GLDNAEYLHSRAEDAGSNPKYREQYDIVLSRAVASLPVLLEYCSPFLKK 167
>gi|168218048|ref|ZP_02643673.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
gi|182379950|gb|EDT77429.1| methyltransferase GidB [Clostridium perfringens NCTC 8239]
Length = 239
Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F+ + ID+G+G GFPG+ +I +E V L++S NK+ +FL V+
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMREDVE---VTLLDSLNKRINFLNEVI 114
Query: 119 QKTAARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVETIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|307708827|ref|ZP_07645289.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
gi|307615193|gb|EFN94404.1| methyltransferase GidB [Streptococcus mitis NCTC 12261]
Length = 237
Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + ++ E ++ L ++W++KINL + + ++ +++H DS+ L P +I
Sbjct: 13 QNLPLSDQQKKQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|168207745|ref|ZP_02633750.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
gi|170660931|gb|EDT13614.1| methyltransferase GidB [Clostridium perfringens E str. JGS1987]
Length = 239
Score = 182 bits (464), Expect = 9e-45, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F+ + ID+G+G GFPG+ +I +E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMREDVE---VTLLDSLNKRINFLNEVV 114
Query: 119 QKTAARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVETIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|322411150|gb|EFY02058.1| 16S rRNA methyltransferase GidB [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 237
Score = 182 bits (464), Expect = 9e-45, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ + ++ + E+ + ++ L ++W+ KINL + + D +++H DS+ L P
Sbjct: 13 DGFPLTMKQKEQFDTYFKLLVEWNNKINLTAITEENDVYLKHFYDSIAPILQGFLANEPI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++E V +I+S NK+ +FL ++ + A + F R
Sbjct: 73 RLLDIGAGAGFPSLPMKILFPNLE---VTIIDSLNKRIAFLTHLAEALALDKLHFFHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 130 EDFGQDKDFRAQFDVVTARAVARMQVLAELTIPFLK 165
>gi|322391720|ref|ZP_08065187.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
gi|321145430|gb|EFX40824.1| glucose inhibited division protein B [Streptococcus peroris ATCC
700780]
Length = 237
Score = 182 bits (464), Expect = 9e-45, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+++ + + E+++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLSLTEQQKMQFEHYFQLLVEWNEKINLTAITDKEEVYLKHFYDSVAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP I I ++E V +I+S NK+ +FL+ + + G F R
Sbjct: 73 KLLDIGAGAGFPSIPMKILYPNLE---VTIIDSLNKRINFLQLLAGELGLEGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQFDIVTARAVARMQVLSELTIPFLK 165
>gi|225386362|ref|ZP_03756126.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
gi|225047544|gb|EEG57790.1| hypothetical protein CLOSTASPAR_00106 [Clostridium asparagiforme
DSM 15981]
Length = 243
Score = 182 bits (464), Expect = 9e-45, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPS 73
++ LE+ +Y L ++ +K +NL + + +D +H DSL + +L
Sbjct: 17 GIALNGGQLEQFFRYYELLVERNKVMNLTAITEEQDVVTKHFTDSLSLVKLMGAEAFAGK 76
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G GFPGI I + V L++S NK+ FL V ++ + R
Sbjct: 77 TLMDVGTGAGFPGIPLKIAFPELN---VTLLDSLNKRVRFLMDVCEELGLKDITAVHGRA 133
Query: 133 QEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+ +RA+A+L +L EY P++
Sbjct: 134 EDFGRNLQYREQFDLCVSRAVANLASLSEYCMPFVK 169
>gi|169343470|ref|ZP_02864470.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|182626391|ref|ZP_02954144.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
gi|169298422|gb|EDS80511.1| methyltransferase GidB [Clostridium perfringens C str. JGS1495]
gi|177908265|gb|EDT70818.1| methyltransferase GidB [Clostridium perfringens D str. JGS1721]
Length = 239
Score = 182 bits (464), Expect = 9e-45, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F+ + ID+G+G GFPG+ +I +E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMREDVE---VTLLDSLNKRINFLNEVV 114
Query: 119 QKTAARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVETIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|309805118|ref|ZP_07699171.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
gi|308165572|gb|EFO67802.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
09V1-c]
Length = 239
Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ I + L +S E+ +Y + ++K NL + ++ +++H DSL
Sbjct: 2 NSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLTP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
++ D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 62 IIKFREIISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQL 118
Query: 122 AARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 119 GLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 166
>gi|312868207|ref|ZP_07728407.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
gi|311095952|gb|EFQ54196.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis F0405]
Length = 237
Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+ ++ E+ E ++ L ++W++KINL + + ++ +++H DS+ + P
Sbjct: 14 GFPLTDRQKEQYERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIENQPIR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL + ++ G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLK 165
>gi|309803370|ref|ZP_07697465.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|309809024|ref|ZP_07702898.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|312871035|ref|ZP_07731137.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|312872104|ref|ZP_07732179.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|312873445|ref|ZP_07733495.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|312875319|ref|ZP_07735327.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|325913550|ref|ZP_08175915.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|329920815|ref|ZP_08277402.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
gi|308164534|gb|EFO66786.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
11V1-d]
gi|308170680|gb|EFO72699.1| 16S rRNA methyltransferase GidB [Lactobacillus iners SPIN
2503V10-D]
gi|311089153|gb|EFQ47589.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2053A-b]
gi|311090954|gb|EFQ49348.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2052A-d]
gi|311092397|gb|EFQ50766.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 2062A-h1]
gi|311093363|gb|EFQ51705.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LEAF 3008A-a]
gi|325477129|gb|EGC80276.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 60-B]
gi|328935595|gb|EGG32062.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
SPIN 1401G]
Length = 239
Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ I + L +S E+ +Y + ++K NL + ++ +++H DSL
Sbjct: 2 NSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLTP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
++ D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 62 IIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQL 118
Query: 122 AARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 119 GLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 166
>gi|163757463|ref|ZP_02164552.1| glucose-inhibited division protein B [Hoeflea phototrophica DFL-43]
gi|162284965|gb|EDQ35247.1| glucose-inhibited division protein B [Hoeflea phototrophica DFL-43]
Length = 208
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 74/152 (48%), Positives = 100/152 (65%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
Y L++ VSRET E+LE + L KW +INL+S T+ D W RH+ DSL++F L P P
Sbjct: 3 QYPLDSGFVSRETRERLETYADLVRKWQSRINLISPKTLPDLWNRHIIDSLQLFALKPQP 62
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+D+GSG GFPG++T+I L+ I G V+L+ES NKKA+FLR V+ +T AR V RI
Sbjct: 63 VQWMDIGSGAGFPGLVTAICLTEIGEGWVHLVESNNKKAAFLRQVIGQTGARASVLPIRI 122
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
A + + D ISARALA L LL + P++
Sbjct: 123 DAARAKVGSMDAISARALASLPDLLSHCAPFV 154
>gi|291536996|emb|CBL10108.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis M50/1]
Length = 238
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ ++ + + + +Y L ++ +K +NL + + ++ +H DSL + +++
Sbjct: 8 FKDGLKELQIELNEKQISQFLKYYELLVETNKVMNLTAITEFDEVVEKHFLDSLSLCRVY 67
Query: 70 PY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ +DLG+G GFPGI I ++E + L +S NK+ FL V+ + +
Sbjct: 68 DLKIDAKILDLGTGAGFPGIPLKIAFPNLE---LVLADSLNKRIKFLNQVIDELELKDIT 124
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E DV +RA+A+L +L EY P++
Sbjct: 125 AVHARAEELGRNKDYREQFDVCVSRAVANLSSLSEYCIPFVK 166
>gi|223983436|ref|ZP_03633622.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
gi|223964608|gb|EEF68934.1| hypothetical protein HOLDEFILI_00902 [Holdemania filiformis DSM
12042]
Length = 233
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGS 80
S E+ + L +W++K+NL + + E+ +H DSL F P ++ D+G+
Sbjct: 18 SARQQEQFVRYAQLLQEWNEKMNLTAITEWEEVLEKHFYDSLVPFAGMPLNTVHLCDVGA 77
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQM 138
G GFP + I ++ + ++E NK+ FL+ V ++ + R ++ A +
Sbjct: 78 GAGFPSLPLKIMNPQLK---ITILEPLNKRVVFLKEVCRELQLDNVECLNVRAEDYAKEH 134
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A+L L E P + +
Sbjct: 135 RESFDLVTARAVANLRVLAELCLPLVKK 162
>gi|240145750|ref|ZP_04744351.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|257202166|gb|EEV00451.1| 16S rRNA methyltransferase GidB [Roseburia intestinalis L1-82]
gi|291539799|emb|CBL12910.1| 16S rRNA m(7)G-527 methyltransferase [Roseburia intestinalis XB6B4]
Length = 242
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
++ + + ++ + + + +Y L ++ +K +NL + + ++ +H
Sbjct: 3 IRMSYNLEQFKDGLKELQIELNEKQISQFLKYYELLVETNKVMNLTAITEFDEVVEKHFL 62
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + +++ + +DLG+G GFPGI I ++E + L +S NK+ FL V+
Sbjct: 63 DSLSLCRVYDLKIDAKILDLGTGAGFPGIPLKIAFPNLE---LVLADSLNKRIKFLNQVI 119
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R +E DV +RA+A+L +L EY P++
Sbjct: 120 DELELKDITAVHARAEELGRNKDYREQFDVCVSRAVANLSSLSEYCIPFVK 170
>gi|259501221|ref|ZP_05744123.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|302191029|ref|ZP_07267283.1| 16S rRNA methyltransferase GidB [Lactobacillus iners AB-1]
gi|325911351|ref|ZP_08173764.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
gi|259167348|gb|EEW51843.1| 16S rRNA methyltransferase GidB [Lactobacillus iners DSM 13335]
gi|325476911|gb|EGC80064.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Lactobacillus iners
UPII 143-D]
Length = 239
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ I + L +S E+ +Y + ++K NL + ++ +++H DSL
Sbjct: 2 NSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLTP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
++ D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 62 IIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQL 118
Query: 122 AARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 119 GLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 166
>gi|322390107|ref|ZP_08063642.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
gi|321143234|gb|EFX38677.1| glucose inhibited division protein B [Streptococcus parasanguinis
ATCC 903]
Length = 237
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+ V+ E+ E ++ L ++W++KINL + + ++ +++H DS+ + P
Sbjct: 14 GFPVTDRQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIAPILQGLIENQPIR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL + ++ G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLK 165
>gi|302388590|ref|YP_003824412.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
gi|302199218|gb|ADL06789.1| methyltransferase GidB [Clostridium saccharolyticum WM1]
Length = 243
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---- 71
L + + + + ++ L ++W+K +NL + + +++ +H DSL + +
Sbjct: 15 LLSIELKNYQINQFYDYFQLLIEWNKFMNLTAITEMDEVITKHFVDSLSLVKAVKEMRTK 74
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFAC 130
ID+G+G GFPGI I ++ + L++S NK+ +FL + + + +
Sbjct: 75 NYRIIDVGTGAGFPGIPLKIAFPDLK---ITLMDSLNKRINFLNEAINRLELKEIEAIHG 131
Query: 131 RIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ P D+ +RA+A+L TL EY P++
Sbjct: 132 RAEDLGRDPLHREQYDLCLSRAVANLSTLSEYCMPFVKP 170
>gi|18311635|ref|NP_563569.1| glucose-inhibited division protein B [Clostridium perfringens str.
13]
gi|110799944|ref|YP_697343.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|168211560|ref|ZP_02637185.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
gi|20177885|sp|Q8XH32|RSMG_CLOPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123049536|sp|Q0TLZ7|RSMG_CLOP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|18146319|dbj|BAB82359.1| glucose-inhibited division protein [Clostridium perfringens str.
13]
gi|110674591|gb|ABG83578.1| 16S rRNA methyltransferase GidB [Clostridium perfringens ATCC
13124]
gi|170710444|gb|EDT22626.1| methyltransferase GidB [Clostridium perfringens B str. ATCC 3626]
Length = 239
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F+ + ID+G+G GFPG+ +I +E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMREDVE---VTLLDSLNKRINFLNEVV 114
Query: 119 QKTAARGK-VFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLGLKNVKTIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|313890867|ref|ZP_07824491.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
gi|313120765|gb|EFR43880.1| 16S rRNA methyltransferase GidB [Streptococcus pseudoporcinus SPIN
20026]
Length = 237
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + Y + ++ ++ + ++ + ++W++KINL + + D +++H DS+
Sbjct: 2 TPEEFYQALATSGYELKQKQKDQFDTYFKVLIEWNQKINLTAITEKNDVYLKHFYDSIAP 61
Query: 66 F---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P +D+G+G GFP + I ++ V +I+S NK+ +FL ++ Q+
Sbjct: 62 ILQGYIPNQPIQLLDIGAGAGFPSLPMKIIFPQLQ---VTIIDSLNKRITFLAHLTQELD 118
Query: 123 ARGKVF-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
G F R ++ Q + D+++ARA+A + L E + P+L
Sbjct: 119 LDGVTFYHGRAEDFGQDKGFRSKYDLVTARAVARMQILSELTIPFLK 165
>gi|300173934|ref|YP_003773100.1| methyltransferase GidB [Leuconostoc gasicomitatum LMG 18811]
gi|299888313|emb|CBL92281.1| Methyltransferase gidB [Leuconostoc gasicomitatum LMG 18811]
Length = 239
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPS 73
+++ +++ E ++ + + ++ +NL + + D +++H DSL V L
Sbjct: 14 GITLTKHQIQQFEDYFDMLIATNEHVNLTAITEKNDVYLKHFYDSLTVSFYEQDLQTAEK 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFP + I ++ + +++S K+ +FL+ VV G ++ R
Sbjct: 74 TLIDIGTGAGFPSLPLKIVFPQLK---ITMVDSLQKRINFLQEVVTTLDLSGVEIIHGRA 130
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ Q D +ARA+A L EY+ P++ +
Sbjct: 131 EDIGQNLRYREAFDYATARAVARTSVLAEYTLPFVKK 167
>gi|315039148|ref|YP_004032716.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325957619|ref|YP_004293031.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|312277281|gb|ADQ59921.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1112]
gi|325334184|gb|ADZ08092.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus 30SC]
gi|327184264|gb|AEA32711.1| 16S rRNA methyltransferase GidB [Lactobacillus amylovorus GRL 1118]
Length = 240
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYP 72
+ + ++ + ++ + ++ + ++ ++ +NL + ++ +++H DS+ +
Sbjct: 13 HNFELTDKQKQQFKLYFKMLIEVNEHVNLTRITEEDEVYLKHFYDSITPLFTFGAVFKDG 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+ D+G+G GFP I I ++ V +++S K+ +FL+ ++ + ++ R
Sbjct: 73 ATLCDVGAGAGFPSIPLKILKPGLK---VTIVDSLQKRLNFLKDLISELGLTDVELVHGR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ Q D+++ARA+A + L EY P + +
Sbjct: 130 AEDVGQNKLYRERFDIVTARAVARMSVLSEYCLPLVKK 167
>gi|116512182|ref|YP_809398.1| glucose-inhibited division protein B [Lactococcus lactis subsp.
cremoris SK11]
gi|123125536|sp|Q02YJ6|RSMG_LACLS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116107836|gb|ABJ72976.1| 16S rRNA m(7)G-527 methyltransferase [Lactococcus lactis subsp.
cremoris SK11]
Length = 238
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSIW 75
+S + +++ E ++ L ++W++KINL + + + +++H DS+ P
Sbjct: 15 IQLSDKQIKQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSVAPILYGLITDQPVSI 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
+D+G+G GFP + I +E V +I+S NK+ +FL + ++ R ++
Sbjct: 75 LDIGAGAGFPSLPMKIIFPELE---VTIIDSLNKRINFLSLLTEELGLENVTLLHGRAED 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
Q T D ++ARA+A L L E++ +L +
Sbjct: 132 FGQDSNYRATFDFVTARAVARLSVLSEFTISFLKK 166
>gi|195978770|ref|YP_002124014.1| 16S rRNA methyltransferase GidB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|238689834|sp|B4U4T4|RSMG_STREM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|195975475|gb|ACG63001.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 237
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + ++ E+ + ++ L + W++KINL + + + +++H DS+
Sbjct: 2 TPQAFYLALEQAGFALTNHQKEQFDTYFKLLVDWNRKINLTAITEENEVYLKHFYDSVAP 61
Query: 66 F---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P +D+G+G GFP I I ++ V +I+S NK+ FL+ + ++
Sbjct: 62 LLQGYIPNEPLRLLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIHFLQLLAKELG 118
Query: 123 ARGKVF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
G F R ++ Q D+++ARA+A + L E + P+L K
Sbjct: 119 LEGVHFYHGRAEDFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIK 167
>gi|315653263|ref|ZP_07906186.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
gi|315489426|gb|EFU79065.1| glucose inhibited division protein B [Lactobacillus iners ATCC
55195]
Length = 224
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ I + L +S E+ +Y + ++K NL + ++ +++H DSL
Sbjct: 2 NSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFYDSLTP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
++ D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 62 IIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQL 118
Query: 122 AARG-KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 119 GLDNITLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 166
>gi|307709239|ref|ZP_07645697.1| methyltransferase GidB [Streptococcus mitis SK564]
gi|307619822|gb|EFN98940.1| methyltransferase GidB [Streptococcus mitis SK564]
Length = 237
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ +S + ++ E ++ L ++W+ KINL + + E+ +++H DS+ +
Sbjct: 13 HNLPLSDQQKKQFERYFELLVEWNGKINLTAITDKEEVYLKHFYDSIAPILQGLISNETI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLK 165
>gi|225867913|ref|YP_002743861.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
gi|259495620|sp|C0MG47|RSMG_STRS7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225701189|emb|CAW98104.1| methyltransferase GidB [Streptococcus equi subsp. zooepidemicus]
Length = 237
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + ++ E+ + ++ L + W++KINL + + + +++H DS+
Sbjct: 2 TPQAFYLALEQAGFALTNHQKEQFDTYFKLLIDWNRKINLTAITEENEVYLKHFYDSVAP 61
Query: 66 F---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P +D+G+G GFP I I ++ V +I+S NK+ FL+ + ++
Sbjct: 62 LLQGYIPNEPLRLLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIQFLQLLAKELG 118
Query: 123 ARGKVF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
G F R ++ Q D+++ARA+A + L E + P+L K
Sbjct: 119 LEGVHFYHGRAEDFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIK 167
>gi|227893998|ref|ZP_04011803.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
gi|227864199|gb|EEJ71620.1| glucose-inhibited division protein B [Lactobacillus ultunensis DSM
16047]
Length = 240
Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 81/159 (50%), Gaps = 11/159 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYP 72
+ + ++ + ++ + ++ L ++ ++ +NL + ++ +++H DS+ ++
Sbjct: 13 HNFKLTDKQKQQFKLYFKLLVEVNEHVNLTRITEEDEVYLKHFYDSVTPLFTFGEVFKDG 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+ D+G+G GFP I I +++ V +++S K+ +FL+ ++ + ++ R
Sbjct: 73 ATLCDVGAGAGFPSIPLKILKPTLK---VTIVDSLQKRLNFLKDLIAQLGLTDVELVHGR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
++ Q D+++ARA+A + L EY P + ++
Sbjct: 130 AEDVGQNKLYREKFDIVTARAVARMSVLSEYCLPLVKKE 168
>gi|134301151|ref|YP_001114647.1| methyltransferase GidB [Desulfotomaculum reducens MI-1]
gi|189039383|sp|A4J9R9|RSMG_DESRM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134053851|gb|ABO51822.1| 16S rRNA m(7)G-527 methyltransferase [Desulfotomaculum reducens
MI-1]
Length = 240
Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
L+ ++++ E +Y L ++W+K INL + ++ ++H DSL ++
Sbjct: 7 TLKQAAKEMEFDLTENQTLAFEKYYNLLIEWNKNINLTAIIEPKEVALKHFIDSLTCLKI 66
Query: 69 --HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
P + +D+G+G GFPGI I I V L++S NK+ +FL V++K
Sbjct: 67 LEIPCQANVLDIGTGAGFPGIPIKIFRPDIN---VTLMDSLNKRVNFLNEVIKKLGLTNI 123
Query: 127 -VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFP 162
R ++ Q D + +RA+A L L EY P
Sbjct: 124 CAIHDRAEDFGQKKEHREKYDYVLSRAVAKLKVLSEYCLP 163
>gi|110803383|ref|YP_699902.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
gi|123145823|sp|Q0SPQ5|RSMG_CLOPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110683884|gb|ABG87254.1| 16S rRNA methyltransferase GidB [Clostridium perfringens SM101]
Length = 239
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D +++ + + +K + L +W++KINL + + E+ +H
Sbjct: 1 MQYFD---LMKKACDSVGMEFNEDKYQKFMLYKDLLKEWNEKINLTAITEDEEIVKKHFI 57
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D ++ F+ + ID+G+G GFPG+ +I +E V L++S NK+ +FL VV
Sbjct: 58 DCIKAFKADEFKKAKTVIDVGTGAGFPGLPIAIMREDVE---VTLLDSLNKRINFLNEVV 114
Query: 119 QKTAARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
K A + + R ++ ++ D+ ++RA+A++ L E+ P++
Sbjct: 115 NKLALKNVETIHSRAEDGARKKELRENFDIATSRAVANMCVLSEFCIPYVK 165
>gi|238917973|ref|YP_002931490.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
gi|238873333|gb|ACR73043.1| glucose inhibited division protein B [Eubacterium eligens ATCC
27750]
Length = 240
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV- 65
N + N ++ E+ + +Y L ++W+ +NL + ++ ++H DSL +
Sbjct: 3 NETFKNNLNSIGVELTDRQYEQFDMYYKLLVEWNSFMNLTGITDYDEVLLKHYVDSLVLD 62
Query: 66 ---FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
ID+G+G GFPG+ I + V L++S NK+ FL V++
Sbjct: 63 IEKIGHGKKEISLIDVGTGAGFPGLPLKIAYPQLN---VVLLDSLNKRVKFLNQVIEDLG 119
Query: 123 ARG-KVFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
G + R ++ + DV +RA+A+L TL+EY+ P++
Sbjct: 120 LTGIETVHSRAEDGGRNKDLREHFDVSVSRAVANLATLVEYNLPFVK 166
>gi|324990717|gb|EGC22653.1| glucose inhibited division protein B [Streptococcus sanguinis
SK353]
Length = 237
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYP 72
L ++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 12 LQGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIGNQE 71
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 72 LKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGR 128
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 129 AEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|296875935|ref|ZP_06899994.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis ATCC
15912]
gi|296433010|gb|EFH18798.1| 16S rRNA methyltransferase GidB [Streptococcus parasanguinis ATCC
15912]
Length = 237
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+ ++ E+ E ++ L ++W++KINL + + E+ +++H DS+ + P
Sbjct: 14 GFPLTDRQKEQYERYFELLVEWNEKINLTAITAKEEVYLKHFYDSIAPILQGLIENQPIR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL + ++ G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLNGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKAFRAQFDIVTARAVARMQVLSELTIPYLK 165
>gi|225871173|ref|YP_002747120.1| methyltransferase GidB [Streptococcus equi subsp. equi 4047]
gi|254766903|sp|C0M821|RSMG_STRE4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225700577|emb|CAW95086.1| methyltransferase GidB [Streptococcus equi subsp. equi 4047]
Length = 237
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+ ++ E+ + ++ L + W++KINL + + + +++H DS+ + P
Sbjct: 14 GFALTNHQKEQFDTYFKLLVDWNRKINLTAITEENEVYLKHFYDSVAPLLQGYIPNEPLR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP I I ++ V +I+S NK+ FL+ + ++ G F R +
Sbjct: 74 LLDIGAGAGFPSIPMKIMFPKLD---VTIIDSLNKRIHFLQLLAKELGLEGVHFYHGRAE 130
Query: 134 EA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ Q D+++ARA+A + L E + P+L K
Sbjct: 131 DFGQDKQFRGQFDLVTARAVARMQILSELTIPFLKIK 167
>gi|157151065|ref|YP_001449807.1| 16S rRNA methyltransferase GidB [Streptococcus gordonii str.
Challis substr. CH1]
gi|189040724|sp|A8AVJ7|RSMG_STRGC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157075859|gb|ABV10542.1| methyltransferase GidB [Streptococcus gordonii str. Challis substr.
CH1]
Length = 237
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQDH 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|322376832|ref|ZP_08051325.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
gi|321282639|gb|EFX59646.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M334]
Length = 237
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + ++ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLPLSDQQKKQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDLAQDKNFRAHYDFVTARAVARMQVLSELTIPYLK 165
>gi|315223095|ref|ZP_07864963.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
gi|315187784|gb|EFU21531.1| 16S rRNA methyltransferase GidB [Streptococcus anginosus F0211]
Length = 238
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ ++ ++ E ++ L ++W++ INL + + ++ +++H DS+ +
Sbjct: 14 HQIELTDRQKQQFERYFELLVEWNENINLTAITDKKEVYLKHFYDSIAPILQGLIDNKGI 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ FL ++ + + + R
Sbjct: 74 KLLDIGAGAGFPSLPMKILYPELD---VTIIDSLNKRILFLNHLADELGLEKVHFYHGRA 130
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q DV++ARA+A + L E + P+L
Sbjct: 131 EDFAQDKDFRAQFDVVTARAVARMQVLAELTIPFLK 166
>gi|302393072|ref|YP_003828892.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
gi|302205149|gb|ADL13827.1| 16S rRNA m(7)G-527 methyltransferase [Acetohalobium arabaticum DSM
5501]
Length = 240
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L A ++ + ++ + + +W++K+NL + E+ I+H DSL
Sbjct: 5 ELLAAGTKELGLELTSKQIDAFMNYLDILQEWNQKMNLTAIDDSEEIVIKHFLDSLSSVS 64
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ IDLG+G GFPGI I ++ + L++S KK +FL+ +V++ +G
Sbjct: 65 VMDLAGDEKMIDLGTGAGFPGIPLKIFYPKLD---LTLLDSTKKKITFLKNLVRELNLKG 121
Query: 126 -KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q + DV+ ARA+A L+ L EY+ P+L
Sbjct: 122 IEFIHGRAEDYGQKSKYRGSYDVVIARAVAPLNILSEYAIPFLKP 166
>gi|237735332|ref|ZP_04565813.1| ribosomal RNA small subunit methyltransferase G [Mollicutes
bacterium D7]
gi|229381077|gb|EEO31168.1| ribosomal RNA small subunit methyltransferase G [Coprobacillus sp.
D7]
Length = 233
Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
++ + + + + ++ + ++W++K+NL + + E +++H DSL + F
Sbjct: 13 KGITLTPQQVNQFKQYFKILVEWNEKMNLTAITDEEGVYLKHFYDSLTIAFDFDFTDQSI 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+G GFP + I ++ + +++S K+ +FL ++ ++ + + R ++
Sbjct: 73 VDVGAGAGFPSVPLKIVYPELK---ITIVDSLTKRITFLNHLFKELNLSNCQAISARAED 129
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
A CD++ ARA+A L+ L E P +
Sbjct: 130 YAKDHRQKCDIVMARAVARLNILDELCLPLVK 161
>gi|329116883|ref|ZP_08245600.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
gi|326907288|gb|EGE54202.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Streptococcus
parauberis NCFD 2020]
Length = 237
Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIWID 77
++ ++ + + ++W++KINL + + +++ +++H DS+ + P +D
Sbjct: 17 LTDYQKDQFKTYLETLIEWNQKINLTAITDLDEVYLKHFYDSIAPILQGHITNQPIKLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
+G+G GFP I I ++ V +I+S NK+ +FL + K F R ++
Sbjct: 77 IGAGAGFPSIPMKIICPELD---VTIIDSLNKRINFLNLLADKLNLTNVHFYHGRAEDFG 133
Query: 137 Q---MITTCDVISARALADLDTLLEYSFPWLYQK 167
Q D+++ARA+A + L E + P+L K
Sbjct: 134 QDKNFRGQFDIVTARAVARMQVLSELTIPFLRIK 167
>gi|312866384|ref|ZP_07726602.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
gi|311098078|gb|EFQ56304.1| 16S rRNA methyltransferase GidB [Streptococcus downei F0415]
Length = 237
Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+ +S + + E ++ L + W++KINL + + ++ +++H DS+ +
Sbjct: 13 EGFELSDKQKQDFESYFRLLVDWNQKINLTAITDKDEVYLKHFYDSVAPVLQGLISNNTI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I +E V +I+S K+ +FL V ++ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILCPQLE---VTIIDSLKKRINFLEQVAKELGMTGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDLGQDKAFRANYDLVTARAVARMQVLSELTIPFLK 165
>gi|148543343|ref|YP_001270713.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri DSM 20016]
gi|184152753|ref|YP_001841094.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri JCM 1112]
gi|227364417|ref|ZP_03848507.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|325683616|ref|ZP_08163132.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
gi|166989746|sp|A5VHQ2|RSMG_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797827|sp|B2G582|RSMG_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148530377|gb|ABQ82376.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus reuteri DSM
20016]
gi|183224097|dbj|BAG24614.1| glucose-inhibited division protein B [Lactobacillus reuteri JCM
1112]
gi|227070510|gb|EEI08843.1| glucose-inhibited division protein B [Lactobacillus reuteri MM2-3]
gi|324977966|gb|EGC14917.1| glucose inhibited division protein B [Lactobacillus reuteri MM4-1A]
Length = 241
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + +S E +++ +Y L ++ ++ +NL + + +++H DS+
Sbjct: 2 NPEQFQQALADHGITLSAEQMQQFADYYQLLVETNEHVNLTRITEKNEVYLKHFYDSITG 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP + I ++ V +++S NK+ +FL +V K
Sbjct: 62 AFAEPRLESEDLTLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEDLVAKL 118
Query: 122 AARGKV-FACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
G R + + D+++ARA+A L L E P
Sbjct: 119 GLTGVTLIHDRAETFSAKTSPYREKFDIVTARAVARLSVLSELCLP 164
>gi|260685216|ref|YP_003216501.1| 16S rRNA methyltransferase GidB [Clostridium difficile CD196]
gi|260688875|ref|YP_003220009.1| 16S rRNA methyltransferase GidB [Clostridium difficile R20291]
gi|260211379|emb|CBA67032.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile CD196]
gi|260214892|emb|CBE07696.1| methyltransferase (putative glucose inhibited division protein B)
[Clostridium difficile R20291]
Length = 242
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M ++ +L+ + + LEK + + + ++W+KK+NL ++ +I+H
Sbjct: 1 MAKVNNIELLKNGIEGFNIDTNDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFL 60
Query: 61 DSLRVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS+ + ID+G+G GFPGI I L S+E + L++S NK+ +FL V
Sbjct: 61 DSISAVKNGYIKNGMSIIDVGTGAGFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVS 117
Query: 119 QKTAARGKVF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ F R ++ DV +ARA+A L L+E+ P++
Sbjct: 118 RVLELDNITFIHGRAEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVK 168
>gi|218682745|ref|ZP_03530346.1| glucose-inhibited division protein B [Rhizobium etli CIAT 894]
Length = 205
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 82/153 (53%), Positives = 113/153 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET E+L++F LF KW+K INLV++ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQERLQHFAALFQKWAKTINLVAASTLDDLWHRHIADSSQIFQIQPQPITW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T AR V A RI++A
Sbjct: 63 VDLGSGGGFPGVITAIYLAELQDGWVHLVESNHKKAAFLRTALRETNARASVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I CD ISARALA+LD L+ YS W+ +
Sbjct: 123 PTEIGECDAISARALAELDGLIGYSAAWMLGNE 155
>gi|308181815|ref|YP_003925943.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|308047306|gb|ADN99849.1| glucose-inhibited division protein B [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 244
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + L + ++ L + +K+ NL + + + +++H DSL
Sbjct: 2 NPEEFKQALAQHEIALTAKQLGQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTP 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P P D+G+G GFP I I ++ V +++S NK+ +FL +VQ+
Sbjct: 62 AFYVPALRDQPLTICDVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQL 118
Query: 122 AARGK-VFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
G F R + + D+++ARA+A L L E P +
Sbjct: 119 GLTGVKTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVK 167
>gi|317055656|ref|YP_004104123.1| methyltransferase GidB [Ruminococcus albus 7]
gi|315447925|gb|ADU21489.1| methyltransferase GidB [Ruminococcus albus 7]
Length = 236
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSI 74
N +S E E+LE + + ++++ +NL + + E ++H DS+ F L P
Sbjct: 13 NGIALSAEQAERLEKYADMLVEYNNMVNLTAITDDEGIAVKHFLDSIYPFTLFDLPEGVS 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+G+G GFP + I + L++S NK+ +FL+ + + R +E
Sbjct: 73 MIDVGTGAGFPSCPLKVYRGDIR---LTLLDSLNKRVNFLQSLSDTIGLDAECVHGRAEE 129
Query: 135 AP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D+ +ARA+A+L L EY P++
Sbjct: 130 FGKKDEYRESFDIATARAVANLTDLCEYCLPFVK 163
>gi|190893977|ref|YP_001980519.1| glucose inhibited division protein B [Rhizobium etli CIAT 652]
gi|238692505|sp|B3PS51|RSMG_RHIE6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190699256|gb|ACE93341.1| glucose inhibited division protein B [Rhizobium etli CIAT 652]
Length = 205
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 81/153 (52%), Positives = 110/153 (71%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
LN VSRET +L++F LF KW+K INLV+ ST++D W RH+ DS ++FQ+ P P W
Sbjct: 3 LNGLRVSRETQARLQHFAALFQKWAKTINLVAPSTLDDLWHRHIADSSQIFQICPEPIRW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+IT+I L+ ++ G +L+ES +KKA+FL +++T ARG V A RI++A
Sbjct: 63 ADLGSGGGFPGVITAIFLAELQDGWAHLVESNHKKAAFLMTALRETEARGSVHAIRIEDA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
P I C ISARALADLD L+ Y+ PW+ K+
Sbjct: 123 PAEIGECGAISARALADLDGLIGYAAPWMLGKE 155
>gi|319946423|ref|ZP_08020660.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
gi|319747391|gb|EFV99647.1| glucose inhibited division protein B [Streptococcus australis ATCC
700641]
Length = 237
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSI 74
+ ++ E+ E ++ L ++W++KINL + + ++ +++H DS+ + P
Sbjct: 14 GFPLTNRQKEQYERYFELLVEWNEKINLTAITEKDEVYLKHFYDSIAPILQGLIENKPIR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ 133
+D+G+G GFP + I ++ V +I+S NK+ +FL + ++ G F R +
Sbjct: 74 LLDIGAGAGFPSLPMKILFPELD---VTIIDSLNKRINFLHLLAEELGLSGVHFYHGRAE 130
Query: 134 EAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A + L E + P+L
Sbjct: 131 DFAQDKVFRAQFDLVTARAVARMQVLSELTIPFLK 165
>gi|330718085|ref|ZP_08312685.1| 16S rRNA methyltransferase GidB [Leuconostoc fallax KCTC 3537]
Length = 239
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWI 76
++ +++ +Y L ++ ++ +NL + + + +++H DSL V Q L I
Sbjct: 17 LTETQVKQFHQYYELLVETNEHVNLTAITEQHEVYLKHFFDSLTVAQYVTSLQTTNQTLI 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+G GFP + I + V L+++ K+ FL+ VV+ + R ++
Sbjct: 77 DVGTGAGFPALPLKIAFPQLR---VTLVDALQKRVRFLKTVVEALGLDHVTIVHGRAEDI 133
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPWLY 165
Q D +ARA+A L EY+ P++
Sbjct: 134 GQEQRFREQFDYATARAVARTSVLAEYTLPFVK 166
>gi|324995236|gb|EGC27148.1| glucose inhibited division protein B [Streptococcus sanguinis
SK678]
Length = 237
Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQDL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAKFDLVTARAVARMQVLSELTIPYLK 165
>gi|295426138|ref|ZP_06818805.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
gi|295064174|gb|EFG55115.1| 16S rRNA methyltransferase GidB [Lactobacillus amylolyticus DSM
11664]
Length = 240
Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYP 72
+ ++++ + + E ++ ++ ++ +NL + ED +++H DS+ +
Sbjct: 13 HNFDLTDKQKTQFEQYFKDLVETNEHVNLTRITDKEDVYLKHFFDSITPLFTFKDVFTKG 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+ D+G+G GFP I I L ++ + +++S K+ +FL+ ++ K ++ R
Sbjct: 73 ATLCDVGAGAGFPSIPLKILLPDLK---ITIVDSLAKRLTFLKELIAKLGLSEVELVHGR 129
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ Q D+++ARA+A++ L EY P + +
Sbjct: 130 AEDVGQNKLYREHFDLVTARAVANMTVLSEYCLPLVKK 167
>gi|319938660|ref|ZP_08013024.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
gi|319811710|gb|EFW07976.1| ribosomal RNA small subunit methyltransferase G [Streptococcus
anginosus 1_2_62CV]
Length = 237
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E+++ L ++W++KINL + + ++ +++H DS +
Sbjct: 13 QQIELTDRQKQQFEHYFELLVEWNEKINLTAITDKKEVYLKHFYDSSAPILQGLIENKNI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I +++ V +I+S NK+ FL ++ + F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPALD---VTIIDSLNKRILFLNHLADELGLENVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKDFRAQFDIVTARAVARMQVLAELTIPFLK 165
>gi|316985715|gb|EFV64661.1| methyltransferase GidB [Neisseria meningitidis H44/76]
Length = 266
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 61 ERKERLRAGIAAMGLDISETAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 120
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 121 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 177
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 178 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 218
>gi|326793314|ref|YP_004311135.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
gi|326544078|gb|ADZ85937.1| methyltransferase GidB [Clostridium lentocellum DSM 5427]
Length = 238
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L N++ L + + L +W++K+NL + + + +H D + +
Sbjct: 1 MKQLLLDGAKELGINLTETQLNQFMMYKSLLQEWNEKMNLTAITEDREVMTKHFLDCMTI 60
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPG++ I +E + L+++ K+ +FL V+ +
Sbjct: 61 QKAIDMNTQKTVIDIGTGAGFPGLVIKIAFPHLE---LTLVDALKKRLTFLEEVINQLGL 117
Query: 124 RG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+G K R ++ + D+ ++RA+A+L L EY+ P++
Sbjct: 118 KGIKCIHSRAEDLGKNKAYREGFDICASRAVANLAVLSEYTLPFVK 163
>gi|325690245|gb|EGD32249.1| glucose inhibited division protein B [Streptococcus sanguinis
SK115]
Length = 237
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIENQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|240851401|ref|YP_002972804.1| glucose inhibited division protein B [Bartonella grahamii as4aup]
gi|240268524|gb|ACS52112.1| glucose inhibited division protein B [Bartonella grahamii as4aup]
Length = 215
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 70/164 (42%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 5 DSNSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D ++ + LLN +VSRET+E L F L L+W+ INL+S++T+ D W RH+ DS
Sbjct: 2 DFSTEKKYQQLLNIVPSVSRETMENLIQFESLILQWNAHINLISATTIPDLWTRHILDSA 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++F L+ + W DLGSGGGFP I+ +I L + G +NL+ES KK +FLR V+ +
Sbjct: 62 QIFPLYAHSLHWCDLGSGGGFPAIVIAIFLKEKKVGHINLVESSGKKVAFLRTVIAQLNL 121
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V+ RI++ Q I D+I+AR LA L++LL+ FP L +K
Sbjct: 122 PATVYHARIEDVYQKIPASDIITARGLAPLNSLLQLIFPLLTEK 165
>gi|296134492|ref|YP_003641739.1| methyltransferase GidB [Thermincola sp. JR]
gi|296033070|gb|ADG83838.1| methyltransferase GidB [Thermincola potens JR]
Length = 244
Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+++ N+ ++ + E + L L+W+++INL S + V + I+H DSL +
Sbjct: 9 ELIKQGGQELNLNLDKKAVLLFETYKDLLLEWNQRINLTSITDVNEIAIKHFLDSLIILG 68
Query: 68 LHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+G+G GFPGI I + V L++S K+ +FLR V+ K +
Sbjct: 69 EIEVKVQCRVVDIGTGAGFPGIPLKIARPDLN---VVLVDSLQKRVAFLREVIDKLQLKN 125
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+V+ R +E P+ + D+ ARA+A + L+EY+ P++
Sbjct: 126 IEVYHGRAEELGHYPEFRESFDLAVARAVAKMPVLVEYNLPFVR 169
>gi|331266663|ref|YP_004326293.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
gi|326683335|emb|CBZ00953.1| glucose-inhibited division protein B (methyltransferase GidB)
[Streptococcus oralis Uo5]
Length = 237
Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+S + + E ++ L ++W+++INL + + E+ +++H DS+ +
Sbjct: 13 QNLPLSDQQKNQFERYFELLVEWNERINLTAITDKEEVYLKHFYDSIAPILQGLISNETI 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKKFRAQFDMVTARAVARMQILSELTIPYLK 165
>gi|307706750|ref|ZP_07643555.1| methyltransferase GidB [Streptococcus mitis SK321]
gi|307617835|gb|EFN96997.1| methyltransferase GidB [Streptococcus mitis SK321]
Length = 237
Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+S + E+ E ++ L ++W++KINL + + E+ +++H DS+ L P +I
Sbjct: 13 QNLPLSDQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETI 72
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ F R
Sbjct: 73 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDSVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D ++ARA+A + L E + P+L
Sbjct: 130 EDLAQDKNFRAHYDFVTARAVARMQVLSELTIPYLK 165
>gi|167754940|ref|ZP_02427067.1| hypothetical protein CLORAM_00444 [Clostridium ramosum DSM 1402]
gi|167704990|gb|EDS19569.1| hypothetical protein CLORAM_00444 [Clostridium ramosum DSM 1402]
Length = 233
Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIW 75
++ + + + + ++ + ++W++K+NL + + E +++H DSL + F
Sbjct: 13 KGITLTPQQVNQFKQYFKILVEWNEKMNLTAITDEEGVYLKHFYDSLTIAFDFDFTDQNI 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+D+G+G GFP + I ++ + +++S K+ +FL ++ ++ + + R ++
Sbjct: 73 VDVGAGAGFPSVPLKIVYPELK---ITIVDSLTKRITFLNHLFKELNLSNCQAISARAED 129
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
A CD++ ARA+A L+ L E P +
Sbjct: 130 YAKDHRQKCDIVMARAVARLNILDELCLPLVK 161
>gi|58039525|ref|YP_191489.1| glucose inhibited division protein B [Gluconobacter oxydans 621H]
gi|81557091|sp|Q5FS13|RSMG_GLUOX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|58001939|gb|AAW60833.1| Glucose inhibited division protein B [Gluconobacter oxydans 621H]
Length = 193
Score = 179 bits (456), Expect = 7e-44, Method: Composition-based stats.
Identities = 69/146 (47%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET E+LE F L ++W+ KINLVS + W RH+EDSL++ +L P DLGS
Sbjct: 4 VSRETHERLERFADLLVQWNAKINLVSPRDIAQLWPRHIEDSLQLAELIPEGKTITDLGS 63
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGII +I G V LIES +K +FLR + AR V A RI+ A
Sbjct: 64 GGGFPGIILAIAT----GNPVTLIESDQRKCAFLREAGRICEARVTVIAKRIEAAS--PP 117
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D+I+ARALA L+ LLE++ P L +
Sbjct: 118 PADIITARALAPLNRLLEWARPLLKE 143
>gi|255308712|ref|ZP_05352883.1| 16S rRNA methyltransferase GidB [Clostridium difficile ATCC 43255]
Length = 239
Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ + + LEK + + + ++W+KK+NL ++ +I+H DS+ +
Sbjct: 5 ELLKNGIEGFNIDTNDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSISAVK 64
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPGI I L S+E + L++S NK+ +FL V +
Sbjct: 65 NGYIKNGMSIIDVGTGAGFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVLELDN 121
Query: 126 KVF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
F R ++ DV +ARA+A L L+E+ P++
Sbjct: 122 ITFIHGRAEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVK 165
>gi|254977335|ref|ZP_05273807.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-66c26]
gi|255094666|ref|ZP_05324144.1| 16S rRNA methyltransferase GidB [Clostridium difficile CIP 107932]
gi|255316419|ref|ZP_05358002.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-76w55]
gi|255519079|ref|ZP_05386755.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-97b34]
gi|255652262|ref|ZP_05399164.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-37x79]
gi|306521977|ref|ZP_07408324.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-32g58]
Length = 239
Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ + + LEK + + + ++W+KK+NL ++ +I+H DS+ +
Sbjct: 5 ELLKNGIEGFNIDTNDSMLEKFKIYREILVEWNKKMNLTGIEDEKEVYIKHFLDSISAVK 64
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPGI I L S+E + L++S NK+ +FL V +
Sbjct: 65 NGYIKNGMSIIDVGTGAGFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVLELDN 121
Query: 126 KVF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
F R ++ DV +ARA+A L L+E+ P++
Sbjct: 122 ITFIHGRAEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVK 165
>gi|270293003|ref|ZP_06199214.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
gi|270278982|gb|EFA24828.1| 16S rRNA methyltransferase GidB [Streptococcus sp. M143]
Length = 245
Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
+S + + E ++ L ++W++KINL + + E+ +++H DS+ +
Sbjct: 21 QNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLISNETI 80
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + Q+ G F R
Sbjct: 81 KLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELDLDGVHFYHGRA 137
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 138 EDFAQDKNFRAHFDMVTARAVARMQILSELTIPYLK 173
>gi|325697023|gb|EGD38910.1| glucose inhibited division protein B [Streptococcus sanguinis
SK160]
Length = 237
Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + +K + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEKLGLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q T D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRTQFDLVTARAVARMQVLSELTIPYLK 165
>gi|260437681|ref|ZP_05791497.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
gi|292809907|gb|EFF69112.1| 16S rRNA methyltransferase GidB [Butyrivibrio crossotus DSM 2876]
Length = 237
Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
++++ + KL +Y L ++ +K +NL + + +D I+H DSL + + +
Sbjct: 13 GIELNQDKINKLINYYELLIEKNKVMNLTAITEYKDVVIKHFADSLSIIKAVNMSEVTNI 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G GFPG++ I ++ + L++S NK+ +FL V+ + + R ++
Sbjct: 73 IDIGTGAGFPGMVLKIVFPDVK---ITLLDSLNKRVNFLNEVITELQLKDINAIHGRAED 129
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLY 165
D+ +RA+A+L TL EY P++
Sbjct: 130 YAHNDIYREKYDLCVSRAVANLSTLSEYCIPYVK 163
>gi|327458814|gb|EGF05162.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1057]
Length = 237
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + ++ ++ E ++ L ++W++KINL + + + +++H DS+
Sbjct: 2 TPQEFYQLLVQQGIELNDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAP 61
Query: 66 F---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++
Sbjct: 62 VLQGLIDNQELKLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELG 118
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++ Q D+++ARA+A + L E + P+L
Sbjct: 119 LDKVHFYHGRAEDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|300769525|ref|ZP_07079411.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300492940|gb|EFK28122.1| 16S rRNA methyltransferase GidB [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 244
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + L + ++ L + +K+ NL + + + +++H DSL
Sbjct: 2 NPEEFKQALAQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTP 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P P D+G+G GFP I I ++ V +++S NK+ +FL +VQ+
Sbjct: 62 AFYVPALRDQPLTICDVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQL 118
Query: 122 AARGK-VFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
A G F R + + D+++ARA+A L L E P +
Sbjct: 119 ALTGVQTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVK 167
>gi|28379586|ref|NP_786478.1| glucose-inhibited division protein B [Lactobacillus plantarum
WCFS1]
gi|38257501|sp|Q88T09|RSMG_LACPL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28272426|emb|CAD65350.1| cell division protein GidB [Lactobacillus plantarum WCFS1]
Length = 244
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + L + ++ L + +K+ NL + + + +++H DSL
Sbjct: 2 NPEEFKQALAQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTP 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P P D+G+G GFP I I ++ V +++S NK+ +FL +VQ+
Sbjct: 62 AFYVPALRDQPLTICDVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQL 118
Query: 122 AARGK-VFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
G F R + + D+ +ARA+A L L E P +
Sbjct: 119 GLTGVKTFHDRAETFAGKKSAHRESYDIATARAVARLSVLSELCLPLVK 167
>gi|332361813|gb|EGJ39617.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1056]
Length = 237
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|262282118|ref|ZP_06059887.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
gi|262262572|gb|EEY81269.1| ribosomal RNA small subunit methyltransferase G [Streptococcus sp.
2_1_36FAA]
Length = 237
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|125717463|ref|YP_001034596.1| 16S rRNA methyltransferase GidB [Streptococcus sanguinis SK36]
gi|166224624|sp|A3CLJ1|RSMG_STRSV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125497380|gb|ABN44046.1| Methyltransferase gidB, putative [Streptococcus sanguinis SK36]
Length = 237
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELGLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQILSELTIPYLK 165
>gi|254557729|ref|YP_003064146.1| glucose-inhibited division protein B [Lactobacillus plantarum JDM1]
gi|254046656|gb|ACT63449.1| glucose-inhibited division protein B [Lactobacillus plantarum JDM1]
Length = 244
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + L + ++ L + +K+ NL + + + +++H DSL
Sbjct: 2 NPEEFKQALAQHEIALTAKQLAQFALYFQLLVTTNKQFNLTTITAEPEVYLKHFYDSLTP 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP I I ++ V +++S NK+ +FL +VQ+
Sbjct: 62 AFYVPALRDQQLTICDVGAGAGFPSIPLKIAFPQLQ---VTIVDSLNKRINFLNDLVQQL 118
Query: 122 AARGK-VFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
G F R + + D+++ARA+A L L E P +
Sbjct: 119 GLTGVKTFHDRAETFAGKKSAHRESYDIVTARAVARLSVLSELCLPLVK 167
>gi|15890075|ref|NP_355756.1| glucose-inhibited division protein B [Agrobacterium tumefaciens
str. C58]
gi|22095725|sp|Q8UBM1|RSMG_AGRT5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15158060|gb|AAK88541.1| glucose inhibited division protein [Agrobacterium tumefaciens str.
C58]
Length = 205
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/148 (56%), Positives = 109/148 (73%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+N +VSRET E+LE+F LF KW+K NLV+ ST+ + W RHV DS ++FQL P P W
Sbjct: 3 INGQSVSRETQERLEHFVELFKKWNKTTNLVAPSTLTELWSRHVADSAQIFQLSPQPKKW 62
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I L+ + G V+L+ES NKKA+FLR +++T ARG V RI+ A
Sbjct: 63 IDLGSGGGFPGVITAIFLAELGDGWVDLVESNNKKAAFLRIALKETGARGAVHPVRIETA 122
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
++ITTC+ +SARALADLD L Y PW
Sbjct: 123 SEIITTCNAVSARALADLDLLFGYIHPW 150
>gi|302877166|ref|YP_003845799.1| methyltransferase GidB [Clostridium cellulovorans 743B]
gi|307687865|ref|ZP_07630311.1| 16S rRNA methyltransferase GidB [Clostridium cellulovorans 743B]
gi|302580023|gb|ADL54035.1| methyltransferase GidB [Clostridium cellulovorans 743B]
Length = 239
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGF 84
+ + L +W++KINL + + E+ +H DS+++F+ P + ID+G+G GF
Sbjct: 24 NQFIKYKNLLKEWNEKINLTAITEDEEIIKKHFIDSIKIFRFSPLSKMNNIIDVGTGAGF 83
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMIT 140
PG+ I I+ V L++S NK+ +FL V+ + R +E +
Sbjct: 84 PGLPIKIVNPDIK---VTLLDSLNKRVNFLNTVISELGINNIDAIHGRAEEFSRKEEHRG 140
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D +RA+A+L L E P++
Sbjct: 141 QFDGAVSRAVANLTVLSELCIPYVKN 166
>gi|121602548|ref|YP_988351.1| glucose-inhibited division protein B [Bartonella bacilliformis
KC583]
gi|166224576|sp|A1UQU8|RSMG_BARBK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120614725|gb|ABM45326.1| methyltransferase GidB [Bartonella bacilliformis KC583]
Length = 215
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 70/156 (44%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
LLN +VSRET+E L F L ++W+ INL+S++TV W RH+ DS +++ L+
Sbjct: 10 QELLNMLPSVSRETMENLIQFESLIIQWNAHINLISAATVPFLWTRHILDSAQIYPLYSQ 69
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
W DLGSGGGFP I+ +I L + G ++LIES KK +FLR V+ + V+ CR
Sbjct: 70 CLHWCDLGSGGGFPAIVIAIFLKEKQKGHIDLIESNGKKVAFLRTVIAQLNLPATVYHCR 129
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
I++ Q I ++I+AR LA L+TLL+ +FPWL QK
Sbjct: 130 IEDVYQKINAPEIITARGLASLNTLLQLTFPWLKQK 165
>gi|260103056|ref|ZP_05753293.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
gi|260083146|gb|EEW67266.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DSM
20075]
Length = 240
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + E+ + ++ ++ ++ +NL + + +++H DS+
Sbjct: 2 NPEKFILELSKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + D+G+G GFP I I S++ V +++S K+ +FL+ ++ K
Sbjct: 62 LFVFGDVFKDGATLCDVGAGAGFPSIPLKILKPSLK---VTIVDSLAKRLTFLKDLIAKL 118
Query: 122 AARG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 119 GLDNVELVHGRAEDVGQNKLYREKFDIVTARAVAKMSVLSEYCLPLVKK 167
>gi|161508052|ref|YP_001578019.1| 16S rRNA methyltransferase GidB [Lactobacillus helveticus DPC 4571]
gi|172048356|sp|A8YXD7|RSMG_LACH4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160349041|gb|ABX27715.1| Glucose inhibited division protein B [Lactobacillus helveticus DPC
4571]
Length = 240
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + E+ + ++ ++ ++ +NL + + +++H DS+
Sbjct: 2 NPEKFILELSKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + D+G+G GFP I I S++ V +++S K+ +FL+ ++ K
Sbjct: 62 LFVFGDVFKDGATLCDVGAGAGFPSIPLKILKPSLK---VTIVDSLAKRLTFLKDLIAKL 118
Query: 122 AARG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 119 GLDNVELVHGRAEDVGQNKLYREKFDIVTARAVAKMSVLSEYCLPLVKK 167
>gi|255102892|ref|ZP_05331869.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-63q42]
Length = 239
Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ + + LEK + + + + W+KK+NL ++ +I+H DS+ +
Sbjct: 5 ELLKNGIEGFNIDTNDSMLEKFKIYREILVDWNKKMNLTGIEDEKEVYIKHFLDSISAVK 64
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPGI I L S+E + L++S NK+ +FL V +
Sbjct: 65 NGYIKNGMSIIDVGTGAGFPGIPLKICLDSLE---LTLLDSLNKRINFLEEVSRVLELDN 121
Query: 126 KVF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
F R ++ DV +ARA+A L L+E+ P++
Sbjct: 122 ITFIHGRAEDFGKNEDYREKYDVATARAVAGLPILMEFCVPFVK 165
>gi|304439123|ref|ZP_07399042.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372482|gb|EFM26069.1| 16S rRNA methyltransferase GidB [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 234
Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 9 ILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ R LL + + E KL+ + + L+W+ +NL + + E+ ++H D L +F
Sbjct: 1 MTRLEELLKEFEIEFDSEKNNKLQKYKEILLEWNSFMNLTAITDDEEIDVKHFLDCLTIF 60
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ID+G+G GFPGI +I+ +E V L++S NK+ FL VV++T +
Sbjct: 61 KTGELDGKKSVIDVGTGAGFPGIPMAIKNPDLE---VTLLDSLNKRIKFLNKVVEETDLK 117
Query: 125 G-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R +E + DV +RA+A++ TL EY+ P++
Sbjct: 118 NVTTYHGRAEEFARKKEFRDAFDVSVSRAVANMATLTEYTLPYVKP 163
>gi|148656341|ref|YP_001276546.1| 16S rRNA methyltransferase GidB [Roseiflexus sp. RS-1]
gi|189040818|sp|A5UVE3|RSMG_ROSS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148568451|gb|ABQ90596.1| methyltransferase GidB [Roseiflexus sp. RS-1]
Length = 234
Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-F 66
+L + + +E+ + W+ ++NL + + E RH DSLR
Sbjct: 2 DMLLNTARAWGLRLDQRQIEQFARYSAELRAWNTRVNLTAITDEEGIVARHFLDSLRCAL 61
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-G 125
PS ID+GSG GFPG+ I + V L+ES KKA+FLR+++ R
Sbjct: 62 SWGDAPSSLIDIGSGAGFPGLPLKILRPELR---VALVESVGKKAAFLRHMITVLDLRDV 118
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
V R + PQ DV++ARA+A+L TL EY P
Sbjct: 119 TVLTARAETVGRDPQHREQYDVVTARAVAELATLAEYCLPLCR 161
>gi|331002967|ref|ZP_08326479.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
gi|330413011|gb|EGG92386.1| 16S rRNA methyltransferase GidB [Lachnospiraceae oral taxon 107
str. F0167]
Length = 241
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
Y D L + + ++S + EKL FY L ++ +K +NL S + +++ +H DS
Sbjct: 2 YNDMARYLSESEIP-GIDISDDKKEKLYRFYELLIEKNKVMNLTSITELKECTYKHFIDS 60
Query: 63 LRVFQLHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + ++ DLG+G GFPGI +I ++ + LI+S NK+ F++ V
Sbjct: 61 ISLIKIVKDLDSKDYNIADLGTGAGFPGIPLAIVFPNLN---LTLIDSLNKRIKFIQEVC 117
Query: 119 QKTAARGK-VFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ + D+ +RA+A+L +L EY P +
Sbjct: 118 ENLGLENVNAIHSRAEDIARNRDYRESFDICVSRAVANLASLSEYCLPLVK 168
>gi|227891371|ref|ZP_04009176.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
gi|227866760|gb|EEJ74181.1| glucose-inhibited division protein B [Lactobacillus salivarius ATCC
11741]
Length = 241
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--- 62
+ R + N++ E +++ E +Y ++ +K +NL + + + +++H DS
Sbjct: 2 TPEEFRQSLAEQGLNLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLL 61
Query: 63 -LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L V L D+G+G GFP + I ++ + +++S NK+ FL+ + QK
Sbjct: 62 ALTVKDLQTEELSLCDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKL 118
Query: 122 AA-RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPW 163
R +E D+++ARA+A + L E P
Sbjct: 119 NLQDVHFHHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPL 165
>gi|320530365|ref|ZP_08031427.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
gi|320137377|gb|EFW29297.1| 16S rRNA methyltransferase GidB [Selenomonas artemidis F0399]
Length = 244
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV- 65
IL A ++ LE+ + L L W++++NL + + ED ++H+ DSL
Sbjct: 6 REILAARAAAFGMPLTNAQLEQCVRYNELLLTWNERMNLTALTAPEDVAVKHIVDSLSAY 65
Query: 66 -FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
L ID+G+G G PGI +I IE V L+++ K+ FL V+++ +
Sbjct: 66 DVPLFARAKSLIDVGTGAGLPGIPLAIYAPEIE---VTLMDALQKRVRFLTEVIEQLGLK 122
Query: 125 GKV-FACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
V R + A + D+ +RA+A L L EY+ P++
Sbjct: 123 NVVCVHARAEAAARMHTYRAQYDIAVSRAVARLPVLAEYALPFVR 167
>gi|228474165|ref|ZP_04058902.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|314935196|ref|ZP_07842549.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
gi|228271860|gb|EEK13197.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis SK119]
gi|313656531|gb|EFS20270.1| 16S rRNA methyltransferase GidB [Staphylococcus hominis subsp.
hominis C80]
Length = 240
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++ + ++ + +Y L ++W++K+NL S + + +++H DS+ +
Sbjct: 7 LTKALSEQGIELTDQQQQQFQTYYRLLVEWNEKMNLTSITDEHEVYLKHFYDSITAGFYY 66
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK 126
+ D+G+G GFP I I ++ V +++S NK+ FL ++ +
Sbjct: 67 DFNQPLTLCDVGAGAGFPSIPLKIVFPELK---VTIVDSLNKRIQFLNHLAVELGLTQVS 123
Query: 127 VFACRIQEAPQ--MITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + T DV++ARA+A L L E P + +
Sbjct: 124 FVHDRAETFGKGVNRETYDVVTARAVARLTVLSELCLPLVKK 165
>gi|86147164|ref|ZP_01065480.1| glucose-inhibited division protein B [Vibrio sp. MED222]
gi|218711033|ref|YP_002418654.1| 16S rRNA methyltransferase GidB [Vibrio splendidus LGP32]
gi|254766912|sp|B7VN06|RSMG_VIBSL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85835048|gb|EAQ53190.1| glucose-inhibited division protein B [Vibrio sp. MED222]
gi|218324052|emb|CAV20414.1| glucose-inhibited division protein B [Vibrio splendidus LGP32]
Length = 210
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
VS + +L + L KW+K NL S ++ ++H+ DS+ + H +ID
Sbjct: 16 ELEVSEKQRSQLVGYVELLNKWNKAYNLTSVRDPQEMMVKHILDSI-IVSTHLQGKRFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI E L++S K+ F++ V+ + V R++E
Sbjct: 75 VGTGPGLPGIPLSIMNPDCE---FYLLDSLGKRIRFIKQVIHELGIDNVVPIQSRVEEF- 130
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q D + +RA A + ++E+ ++
Sbjct: 131 QPEEKFDAVLSRAFASMTDMVEWCHHLPKEQ 161
>gi|227543811|ref|ZP_03973860.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|300908879|ref|ZP_07126342.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri SD2112]
gi|227186188|gb|EEI66259.1| glucose-inhibited division protein B [Lactobacillus reuteri
CF48-3A]
gi|300894286|gb|EFK87644.1| 16S rRNA methyltransferase GidB [Lactobacillus reuteri SD2112]
Length = 241
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + +S E +++ +Y L ++ ++ +NL + ++ +++H DS+
Sbjct: 2 NPEQFQQALADHGITLSAEQMQQFADYYQLLVETNEHVNLTRITEKDEVYLKHFYDSITG 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP + I ++ V +++S NK+ +FL +V K
Sbjct: 62 AFAEPRLESEELTLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEALVAKL 118
Query: 122 AA-RGKVFACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
+ R + + D+++ARA+A L L E P
Sbjct: 119 GLTDVTLIHDRAETFSAKNSPYREKFDIVTARAVARLSVLSELCLP 164
>gi|291531939|emb|CBK97524.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum 70/3]
Length = 232
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+S++ +KL Y +++++ +NL + + E+ ++H DS+ F + S +
Sbjct: 15 NIELSQDKADKLLKLYEFLVEYNQNVNLTAITDFEEVVVKHFIDSVLPFSMIDIKENSSF 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
ID+G+G GFP I I ++G L+E+ NK+ FL + T KV R ++
Sbjct: 75 IDVGTGAGFPSIPLMIVRPDLKGT---LLEALNKRCVFLEKACELTGVDAKVVHGRAEDY 131
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
A + D +ARA+A + L EY P++
Sbjct: 132 AKEKREAFDFATARAVAAMPVLCEYCIPYVK 162
>gi|239624144|ref|ZP_04667175.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520530|gb|EEQ60396.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--- 74
+S +E+ +Y + ++ +K +NL + + + +H DSL +F L +
Sbjct: 9 GITLSDVQMEQFYSYYEILVEKNKVMNLTAITEENEVVTKHFSDSLSLFGLLKEMQVGGD 68
Query: 75 -------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK- 126
ID+G+G GFPGI I ++ V L++S NK+ +L V + G
Sbjct: 69 AWYKTCNVIDVGTGAGFPGIPLKIVFPELK---VTLLDSLNKRVKWLEEVCTELHLEGVC 125
Query: 127 VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ +RA+A+L +L EY P++
Sbjct: 126 CVHGRAEDIGRQAAHREVYDLCVSRAVANLASLSEYCMPFVK 167
>gi|323352787|ref|ZP_08087757.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
gi|322121823|gb|EFX93569.1| glucose inhibited division protein B [Streptococcus sanguinis
VMC66]
Length = 237
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELSLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|160941472|ref|ZP_02088807.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
gi|158435618|gb|EDP13385.1| hypothetical protein CLOBOL_06363 [Clostridium bolteae ATCC
BAA-613]
Length = 259
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----- 70
L +S + LE+ +Y + ++ +K +NL + + D +H DSL +F++
Sbjct: 15 LLGIKLSEKQLEQFFTYYEMLVEKNKVMNLTAITDETDVVSKHFSDSLSLFRVLKRVMDS 74
Query: 71 ---------------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
ID+G+G GFPGI I I+ + L++S NK+ FL
Sbjct: 75 GDGCDGSRVYEEELLEGKSVIDVGTGAGFPGIPLKIAFPGIK---LTLLDSLNKRVKFLE 131
Query: 116 YVVQKTAARGKVF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
V + F R ++ + D+ +RA+A+L +L EY P++
Sbjct: 132 EVCDALELKNVEFIHGRAEDIGRQKEHREMYDLCVSRAVANLASLSEYCMPFVK 185
>gi|323342285|ref|ZP_08082517.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463397|gb|EFY08591.1| glucose inhibited division protein B [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 238
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS E ++ + L + +K +NL E +++H DSL + L S D+GS
Sbjct: 17 VSEEMKQQFLTYKNLIQEVNKVLNLTGIDDDEGIFLKHFYDSLLISPLIKENSSIADIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA-PQM 138
G GFPGI+ +I + V IE K+ +FL VVQ+ + V R ++ ++
Sbjct: 77 GAGFPGIVLAIARPDV---TVTCIEPTTKRTNFLERVVQECGLKNTIVLNGRAEDVIGEL 133
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
+ DV +ARA+A LD L E P++
Sbjct: 134 RESFDVATARAVAYLDILSELCLPFVK 160
>gi|227879182|ref|ZP_03997054.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256849430|ref|ZP_05554862.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|262046097|ref|ZP_06019060.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|312976919|ref|ZP_07788668.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
gi|227861185|gb|EEJ68832.1| glucose-inhibited division protein B [Lactobacillus crispatus
JV-V01]
gi|256713546|gb|EEU28535.1| ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus MV-1A-US]
gi|260573427|gb|EEX29984.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus MV-3A-US]
gi|310896247|gb|EFQ45312.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus CTV-05]
Length = 240
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 2 NPEKFILELSKHNFKLTDQQIEQFKIYFNYLIEVNEHVNLTRITEEDEVYLKHFYDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + D+G+G GFP I I ++ + +++S K+ +FL+ ++ K
Sbjct: 62 LFTFGDVFKDGATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITKL 118
Query: 122 AAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 119 DLKDVELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKK 167
>gi|323340452|ref|ZP_08080708.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
gi|323092141|gb|EFZ34757.1| glucose inhibited division protein B [Lactobacillus ruminis ATCC
25644]
Length = 246
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--- 62
+ R +S +++ +Y + ++ +NL + + ++ +++H DS
Sbjct: 3 TPEEFRQALAARGVELSDHQMQQFADYYEYLVAVNEHVNLTAITQKDEVYLKHFYDSLIP 62
Query: 63 -LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L V L D+G+G GFP I I +++ V +++S NK+ FL + ++
Sbjct: 63 ALTVKDLQTEALTLCDVGAGAGFPSIPMKIAFPNLK---VTIVDSLNKRIRFLNDLSERL 119
Query: 122 AA-RGKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPW 163
+ R +E + + DV++ARA+A L L EY P
Sbjct: 120 GLEEVEFHHGRAEEFAGKKSRHRESYDVVTARAVARLSVLSEYCLPL 166
>gi|301301113|ref|ZP_07207270.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851242|gb|EFK78969.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 241
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--- 62
+ R + N++ E +++ E +Y ++ +K +NL + + + +++H DS
Sbjct: 2 TPEEFRQSLAEQGLNLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLL 61
Query: 63 -LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L V L D+G+G GFP + I ++ + +++S NK+ FL+ + QK
Sbjct: 62 ALTVKDLQTEELSLCDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKL 118
Query: 122 AA-RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPW 163
R +E D+++ARA+A + L E P
Sbjct: 119 NLQDVHFHHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPL 165
>gi|116334626|ref|YP_796153.1| glucose-inhibited division protein B [Lactobacillus brevis ATCC
367]
gi|122268695|sp|Q03NV0|RSMG_LACBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116099973|gb|ABJ65122.1| Cell division SAM-dependent methyltransferase [Lactobacillus brevis
ATCC 367]
Length = 242
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ RA +++ ++ +Y + ++ +NL + + D +++H DSL
Sbjct: 2 NPEEFRAALAAQGIDLTATQEQQFADYYQFLVATNEHVNLTTITAEPDVYLKHFYDSLTP 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP + I ++ V +++S NK+ +FL + K
Sbjct: 62 AFYVSALRTEPLTLCDVGAGAGFPSLPLKIVFPQLQ---VTIVDSLNKRITFLNELAAKL 118
Query: 122 AARGKVF-ACRIQEA----PQMITTCDVISARALADLDTLLEYSFPWLY 165
G F R +E D+++ARA+A + L E P +
Sbjct: 119 NLTGVAFHHARAEEFGGKRAANREGFDLVTARAVARMSVLSELCLPLVK 167
>gi|90962568|ref|YP_536484.1| 16S rRNA methyltransferase GidB [Lactobacillus salivarius UCC118]
gi|122448467|sp|Q1WRS8|RSMG_LACS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|90821762|gb|ABE00401.1| Methyltransferase [Lactobacillus salivarius UCC118]
Length = 241
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--- 62
+ R + N++ E +++ E +Y ++ +K +NL + + + +++H DS
Sbjct: 2 TPEEFRQSLAGQGLNLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLL 61
Query: 63 -LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L V L D+G+G GFP + I ++ + +++S NK+ FL+ + QK
Sbjct: 62 ALTVKDLQTEELSLCDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKL 118
Query: 122 AA-RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLY 165
R +E D+++ARA+A + L E P
Sbjct: 119 NLQDVHFHHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPLAK 167
>gi|256844007|ref|ZP_05549494.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|293380690|ref|ZP_06626739.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
gi|256613912|gb|EEU19114.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 125-2-CHN]
gi|290922730|gb|EFD99683.1| 16S rRNA methyltransferase GidB [Lactobacillus crispatus 214-1]
Length = 240
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 2 NPEKFILELSKHNFKLTDQQIEQFKIYFNYLIEVNEHVNLTRITEEDEVYLKHFYDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + D+G+G GFP I I ++ + +++S K+ +FL+ ++ K
Sbjct: 62 LFTFGDVFKDGATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITKL 118
Query: 122 AAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 119 DLKDVELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKK 167
>gi|58338077|ref|YP_194662.1| 16S rRNA methyltransferase GidB [Lactobacillus acidophilus NCFM]
gi|227902745|ref|ZP_04020550.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
gi|81311393|sp|Q5FI43|RSMG_LACAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|58255394|gb|AAV43631.1| glucose inhibited division protein B [Lactobacillus acidophilus
NCFM]
gi|227869408|gb|EEJ76829.1| glucose-inhibited division protein B [Lactobacillus acidophilus
ATCC 4796]
Length = 240
Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + +S + ++ + ++ ++ ++ +NL + + +++H DS+
Sbjct: 2 NPEEFILELSKHNFELSDKQKQQFKLYFKYLIEVNEHVNLTRITEENEVYLKHFFDSVTP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
++ + D+G+G GFP I I +++ V +++S K+ +FL+ +++K
Sbjct: 62 LFTFGEVFKDGATLCDVGAGAGFPSIPLKILNPTLK---VTIVDSLAKRLTFLKNLIEKL 118
Query: 122 AA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 119 GLTDVELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKK 167
>gi|116493452|ref|YP_805187.1| cell division SAM-dependent methyltransferase [Pediococcus
pentosaceus ATCC 25745]
gi|122265084|sp|Q03DH7|RSMG_PEDPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103602|gb|ABJ68745.1| 16S rRNA m(7)G-527 methyltransferase [Pediococcus pentosaceus ATCC
25745]
Length = 243
Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + Y +S + + +Y + ++ ++ +NL + + + +++H DS+
Sbjct: 2 TPEEFKKALEDKGYQISDHQMAQFATYYKMLVETNEHVNLTAITEENEVYLKHFYDSVTP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + D+G+G GFP + I S++ V +++S NK+ +FL+ +V +
Sbjct: 62 LLEAPEYFKSGAELCDVGAGAGFPSLPMKILFPSLK---VTIVDSLNKRITFLKTLVDQL 118
Query: 122 AA-RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R + ++++ARA+A L L E P + Q
Sbjct: 119 ELTDVTLVHDRAETFGAKKSVYREKFEIVTARAVARLSVLSELCIPLVKQ 168
>gi|222150244|ref|YP_002551201.1| 16S rRNA methyltransferase GidB [Agrobacterium vitis S4]
gi|254766872|sp|B9JV51|RSMG_AGRVS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221737226|gb|ACM38189.1| glucose inhibited division protein [Agrobacterium vitis S4]
Length = 211
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 87/153 (56%), Positives = 109/153 (71%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET EKL++F LF KWSK INLV++ST + W RHV DS ++F+L P P W
Sbjct: 9 LTGLRVSRETYEKLDHFVDLFGKWSKVINLVANSTKDQIWHRHVIDSAQLFKLRPNPQHW 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
IDLGSGGGFPG+IT+I LS G V+L+ES NKKA+FLR + +T ARG+V RI+EA
Sbjct: 69 IDLGSGGGFPGVITAILLSEKSDGWVDLVESNNKKAAFLRTALMETGARGRVHPVRIEEA 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ ++ CD ISARALADLD L Y+ PW + K
Sbjct: 129 HKSLSDCDTISARALADLDLLFSYASPWAEKNK 161
>gi|163869377|ref|YP_001610633.1| 16S rRNA methyltransferase GidB [Bartonella tribocorum CIP 105476]
gi|189039482|sp|A9IZX8|RSMG_BART1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161019080|emb|CAK02638.1| glucose inhibited division protein B [Bartonella tribocorum CIP
105476]
Length = 213
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 66/148 (44%), Positives = 93/148 (62%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET+E L F L L+W+ INL+S++T+ D W RH+ DS ++F L + W DLG
Sbjct: 18 SVSRETMENLIQFESLILQWNAHINLISAATIPDLWTRHILDSAQIFPLCSHSLQWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L G +NL+ES KK +FLR V+ + V+ RI++ Q I
Sbjct: 78 SGGGFPAIVIAIFLKEKRSGHINLVESNGKKVAFLRTVIAQLNLPATVYHARIEDIYQKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+I+AR LA L+ LL+ FP L +K
Sbjct: 138 PISDIITARGLAPLNELLQLIFPLLTEK 165
>gi|261400115|ref|ZP_05986240.1| 16S rRNA methyltransferase GidB [Neisseria lactamica ATCC 23970]
gi|269210347|gb|EEZ76802.1| 16S rRNA methyltransferase GidB [Neisseria lactamica ATCC 23970]
Length = 207
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPYIEGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|300215180|gb|ADJ79596.1| Ribosomal RNA small subunit methyltransferase G (16S ribosomal RNA
7-methylguanosine methyltransferase) (16S ribosomal RNA
m7G methyltransferase) [Lactobacillus salivarius CECT
5713]
Length = 241
Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--- 62
+ R + N++ E +++ E +Y ++ +K +NL + + + +++H DS
Sbjct: 2 TPEEFRQSLAEQGLNLTDEQMQQFELYYEFLVETNKNLNLTAITEKNEVYLKHFYDSLLL 61
Query: 63 -LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L V L D+G+G GFP + I ++ + +++S NK+ FL+ + QK
Sbjct: 62 ALTVKNLQTEELSLCDVGAGAGFPSLPVKIAFPQLK---ITIVDSLNKRIKFLQELTQKL 118
Query: 122 AA-RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPW 163
R +E D+++ARA+A + L E P
Sbjct: 119 NLQDVHFHHARAEEFGGKRSVHRERYDLVTARAVARMSVLSELCLPL 165
>gi|319899516|ref|YP_004159613.1| glucose inhibited division protein B [Bartonella clarridgeiae 73]
gi|319403484|emb|CBI77064.1| glucose inhibited division protein B [Bartonella clarridgeiae 73]
Length = 219
Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats.
Identities = 63/148 (42%), Positives = 95/148 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L F L ++W+K +NL+S++T+ W RH+ DS +++ L W DLG
Sbjct: 18 SVSRETMKLLIQFESLVIQWNKHVNLISAATIPVLWTRHILDSAQIYPLKSQSLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L +GG ++L+ES KK +FLR V+ + V CR+++ + I
Sbjct: 78 SGGGFPAIVIAIFLKEKKGGHIDLVESNGKKVAFLRNVIAQLNLPATVHHCRVEDVYKKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+++AR LA LDTLL+ PWL QK
Sbjct: 138 KAPDILTARGLASLDTLLQLMSPWLTQK 165
>gi|156743304|ref|YP_001433433.1| 16S rRNA methyltransferase GidB [Roseiflexus castenholzii DSM
13941]
gi|189040817|sp|A7NPB9|RSMG_ROSCS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156234632|gb|ABU59415.1| methyltransferase GidB [Roseiflexus castenholzii DSM 13941]
Length = 234
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWI 76
+ + +E+ + W+ ++NL S + + RH DSLR PS I
Sbjct: 12 GLRLDQRQIEQFARYSAELRAWNMRVNLTSITDEREIVTRHFLDSLRCALSWGDTPSRLI 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ-- 133
D+GSG GFPG+ I + V L+ES KKA+FL+++V R V R +
Sbjct: 72 DIGSGAGFPGLPLKILHPELH---VTLVESVGKKAAFLQHIVAVLDLRDVTVVTARAEVV 128
Query: 134 -EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
PQ DV++ARA+A+L TL+EY P
Sbjct: 129 GRDPQHREQYDVVTARAVAELATLVEYGLPLCR 161
>gi|313667500|ref|YP_004047784.1| glucose inhibited division protein B [Neisseria lactamica ST-640]
gi|313004962|emb|CBN86390.1| glucose inhibited division protein B [Neisseria lactamica 020-06]
Length = 207
Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPYIEGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTGHLLKD 159
>gi|194467503|ref|ZP_03073490.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
gi|194454539|gb|EDX43436.1| methyltransferase GidB [Lactobacillus reuteri 100-23]
Length = 241
Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + +S E +++ +Y L ++ ++ +NL + ++ +++H DS+
Sbjct: 2 NPEQFQQALADHGIALSAEQMQQFADYYRLLVETNEHVNLTRITEKDEVYLKHFYDSIMG 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP + I ++ V +++S NK+ +FL +V K
Sbjct: 62 AFAEPRLESEELTLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRIAFLEDLVAKL 118
Query: 122 AA-RGKVFACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
+ R + + D+++ARA+A L L E P
Sbjct: 119 GLTDVTLIHDRAETFSAKNSPYREKFDIVTARAVARLSVLSELCLP 164
>gi|317050170|ref|YP_004117818.1| methyltransferase GidB [Pantoea sp. At-9b]
gi|316951787|gb|ADU71262.1| methyltransferase GidB [Pantoea sp. At-9b]
Length = 205
Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A ++S + ++L + L KW+K NL S + +RH+ DS+ V + H
Sbjct: 5 LSALLKAANISLSDQQKQQLVGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LQGERFIDVGTGPGLPGIPLAIVRPQSH---FTLLDSLGKRVRFLRQVQHELGLTNVTPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 121 QSRVEEFPAE-PPFDGVISRAFASLEDMVNWCHHL 154
>gi|167041017|ref|YP_001664002.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300913772|ref|ZP_07131089.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307725542|ref|YP_003905293.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
gi|193806453|sp|B0K5N2|RSMG_THEPX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166855257|gb|ABY93666.1| methyltransferase GidB [Thermoanaerobacter sp. X514]
gi|300890457|gb|EFK85602.1| methyltransferase GidB [Thermoanaerobacter sp. X561]
gi|307582603|gb|ADN56002.1| methyltransferase GidB [Thermoanaerobacter sp. X513]
Length = 240
Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HP 70
L ++V E + +Y L L+W++K+NL + + + I+H DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 72 EEEKIIDVGTGAGFPCIPLKIVFPKLKAT---LLDSSKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVK 167
>gi|59802110|ref|YP_208822.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA
1090]
gi|194099969|ref|YP_002003108.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae NCCP11945]
gi|239997976|ref|ZP_04717900.1| glucose-inhibited division protein B [Neisseria gonorrhoeae 35/02]
gi|240015045|ref|ZP_04721958.1| glucose-inhibited division protein B [Neisseria gonorrhoeae DGI18]
gi|240017494|ref|ZP_04724034.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA6140]
gi|240081635|ref|ZP_04726178.1| glucose-inhibited division protein B [Neisseria gonorrhoeae FA19]
gi|240113916|ref|ZP_04728406.1| glucose-inhibited division protein B [Neisseria gonorrhoeae MS11]
gi|240116648|ref|ZP_04730710.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID18]
gi|240118871|ref|ZP_04732933.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID1]
gi|240122114|ref|ZP_04735076.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
PID24-1]
gi|240124408|ref|ZP_04737364.1| glucose-inhibited division protein B [Neisseria gonorrhoeae PID332]
gi|240124720|ref|ZP_04737606.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
SK-92-679]
gi|240129085|ref|ZP_04741746.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
SK-93-1035]
gi|254494669|ref|ZP_05107840.1| methyltransferase gidB [Neisseria gonorrhoeae 1291]
gi|260439592|ref|ZP_05793408.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae DGI2]
gi|268593826|ref|ZP_06127993.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae 35/02]
gi|268597731|ref|ZP_06131898.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae FA19]
gi|268599978|ref|ZP_06134145.1| methyltransferase gidB [Neisseria gonorrhoeae MS11]
gi|268602316|ref|ZP_06136483.1| methyltransferase gidB [Neisseria gonorrhoeae PID18]
gi|268604578|ref|ZP_06138745.1| methyltransferase gidB [Neisseria gonorrhoeae PID1]
gi|268683035|ref|ZP_06149897.1| methyltransferase gidB [Neisseria gonorrhoeae PID332]
gi|268683297|ref|ZP_06150159.1| methyltransferase gidB [Neisseria gonorrhoeae SK-92-679]
gi|268687464|ref|ZP_06154326.1| methyltransferase gidB [Neisseria gonorrhoeae SK-93-1035]
gi|291042830|ref|ZP_06568571.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae DGI2]
gi|293398150|ref|ZP_06642355.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae F62]
gi|75432367|sp|Q5F5X7|RSMG_NEIG1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238693231|sp|B4RR25|RSMG_NEIG2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|59719005|gb|AAW90410.1| putative glucose inhibited division protein B [Neisseria
gonorrhoeae FA 1090]
gi|193935259|gb|ACF31083.1| glucose-inhibited division protein B [Neisseria gonorrhoeae
NCCP11945]
gi|226513709|gb|EEH63054.1| methyltransferase gidB [Neisseria gonorrhoeae 1291]
gi|268547215|gb|EEZ42633.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae 35/02]
gi|268551519|gb|EEZ46538.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae FA19]
gi|268584109|gb|EEZ48785.1| methyltransferase gidB [Neisseria gonorrhoeae MS11]
gi|268586447|gb|EEZ51123.1| methyltransferase gidB [Neisseria gonorrhoeae PID18]
gi|268588709|gb|EEZ53385.1| methyltransferase gidB [Neisseria gonorrhoeae PID1]
gi|268623319|gb|EEZ55719.1| methyltransferase gidB [Neisseria gonorrhoeae PID332]
gi|268623581|gb|EEZ55981.1| methyltransferase gidB [Neisseria gonorrhoeae SK-92-679]
gi|268627748|gb|EEZ60148.1| methyltransferase gidB [Neisseria gonorrhoeae SK-93-1035]
gi|291013264|gb|EFE05230.1| ribosomal RNA small subunit methyltransferase G [Neisseria
gonorrhoeae DGI2]
gi|291611413|gb|EFF40483.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae F62]
gi|317165420|gb|ADV08961.1| 16S rRNA methyltransferase GidB [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 207
Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGPDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FLR +
Sbjct: 62 LLPYIEGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLRQAAIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTAHLLKD 159
>gi|218767117|ref|YP_002341629.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis Z2491]
gi|20177904|sp|Q9JX38|RSMG_NEIMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121051125|emb|CAM07396.1| glucose inhibited division protein B homolog [Neisseria
meningitidis Z2491]
Length = 207
Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTAHLLKD 159
>gi|295693715|ref|YP_003602325.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
crispatus ST1]
gi|295031821|emb|CBL51300.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
crispatus ST1]
Length = 240
Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + +E+ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 2 NPEKFILELSKHNFKLTDQQIEQFKIYFNYLIEVNENVNLTRITEEDEVYLKHFYDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + D+G+G GFP I I ++ + +++S K+ +FL+ ++ K
Sbjct: 62 LFTFGDVFKDGATLCDVGAGAGFPSIPLKILQPELK---ITIVDSLAKRLTFLKNLITKL 118
Query: 122 AAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 119 DLKDVELVHGRAEDVGQNKLYREKFDLVTARAVARMSVLSEYCLPLVKK 167
>gi|164686454|ref|ZP_02210482.1| hypothetical protein CLOBAR_00019 [Clostridium bartlettii DSM
16795]
gi|164604465|gb|EDQ97930.1| hypothetical protein CLOBAR_00019 [Clostridium bartlettii DSM
16795]
Length = 239
Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
ILR S + L + + + ++W++K+NL ++ +I+H DS+
Sbjct: 5 DILRQGIEDFGIEASDKMLADFQKYKEILVEWNQKMNLTGIEDEKEVFIKHFLDSISAVS 64
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPG+ I L ++ V L++S NK+ +FL+ V +
Sbjct: 65 KGYIKNGMSLIDVGTGAGFPGMPLRISLPDLK---VTLLDSLNKRINFLQEVANQIDIDD 121
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ D+ +ARA+A L L+E+ P++
Sbjct: 122 IEFIHGRAEDFGKDENYRECFDIATARAVAGLPALMEFCVPFVK 165
>gi|163803607|ref|ZP_02197473.1| glucose-inhibited division protein B [Vibrio sp. AND4]
gi|159172601|gb|EDP57459.1| glucose-inhibited division protein B [Vibrio sp. AND4]
Length = 211
Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 6 SNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
SN R + L+ ++ S + E+L + L KW+K NL S ++ ++H+ DS+
Sbjct: 2 SNLRTRLDALIAQTDLQVSEKQREQLVGYVELLDKWNKAYNLTSVRDPQEMLVKHILDSI 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V P +ID+G+G G PGI +I L++S K+ F++ VV
Sbjct: 62 VVSTHLP-GERFIDVGTGPGLPGIPLAIMNPE---KSFYLLDSLGKRIRFIKQVVHTLGL 117
Query: 124 RGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E Q D + +RA A + ++E+
Sbjct: 118 KNVTAIQSRVEEF-QPEEKFDGVLSRAFASMTDMVEWCHHL 157
>gi|255657631|ref|ZP_05403040.1| 16S rRNA methyltransferase GidB [Clostridium difficile QCD-23m63]
gi|296452688|ref|ZP_06894379.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296880060|ref|ZP_06904029.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
gi|296258470|gb|EFH05374.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP08]
gi|296428927|gb|EFH14805.1| 16S rRNA methyltransferase GidB [Clostridium difficile NAP07]
Length = 239
Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ + + LEK + + + + W+KK+NL ++ +I+H DS+ +
Sbjct: 5 ELLKNGIEGFNIDTNDSMLEKFKIYREILIDWNKKMNLTGIEDEKEVYIKHFLDSISAVK 64
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPGI I L +E + L++S NK+ +FL V +
Sbjct: 65 NGYIKNGMSIIDVGTGAGFPGIPLKICLDRLE---LTLLDSLNKRINFLEEVSRVLELDN 121
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
K R ++ DV +ARA+A L L+E+ P++
Sbjct: 122 IKFIHGRAEDFGKNENYREKYDVATARAVAGLPILMEFCVPFVK 165
>gi|325679062|ref|ZP_08158656.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
gi|324109186|gb|EGC03408.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Ruminococcus albus
8]
Length = 233
Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSI 74
N ++ E +L+ + + + ++ +NL + + E +H DS+ F L P +
Sbjct: 10 NGIALTAEQTGRLDKYAEMLCERNEHVNLTAITDPEGIAEKHFFDSIYPFTLFELPQGAS 69
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+G+G GFP + I + L++S NK+ +FL+ + + K R +E
Sbjct: 70 LIDVGTGAGFPSCPLKVFRDDIS---LTLLDSLNKRVNFLQGISDALSLDAKCVHGRAEE 126
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWLY 165
P D+ +ARA+A+L L EY P++
Sbjct: 127 FGKKPDYREQFDIATARAVANLRDLCEYCLPFVK 160
>gi|319406396|emb|CBI80037.1| glucose inhibited division protein B [Bartonella sp. AR 15-3]
Length = 219
Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats.
Identities = 65/148 (43%), Positives = 95/148 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L F L ++W+ INL+S++T+ W RH+ DS +++ L W DLG
Sbjct: 18 SVSRETIKHLIEFETLVIQWNIHINLISATTIPILWTRHILDSAQIYPLKSQFLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L +GG ++L+ES KKA+FLR V+ + V CRI++ + I
Sbjct: 78 SGGGFPAIVIAIFLKEKKGGHIDLVESNGKKAAFLRNVIAQLNLPATVHHCRIEDVYEKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+++AR LA LDTLL + PWL QK
Sbjct: 138 KKPDILTARGLASLDTLLHFMSPWLTQK 165
>gi|260887476|ref|ZP_05898739.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|330840114|ref|YP_004414694.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|260862763|gb|EEX77263.1| 16S rRNA methyltransferase GidB [Selenomonas sputigena ATCC 35185]
gi|329747878|gb|AEC01235.1| methyltransferase GidB [Selenomonas sputigena ATCC 35185]
Length = 238
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L L + + +EK +Y L ++W+ K+NL + + + ++H+ DSL +
Sbjct: 4 QELERASALYGLPLDAKQIEKFGIYYRLIIEWNAKMNLTAITEPREVAVKHIVDSLTALR 63
Query: 68 LHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G GFPGI I ++ + L++S K+ FL VV+ G
Sbjct: 64 GIEERDSLRLIDVGTGAGFPGIPLKIVRPDLK---LTLLDSLKKRVHFLETVVEALGLEG 120
Query: 126 -KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ R +EA + + D+ ++RA+A L L EY P++
Sbjct: 121 AECLHGRAEEAARQSALRERFDIAASRAVARLPVLAEYLLPFVR 164
>gi|304318131|ref|YP_003853276.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302779633|gb|ADL70192.1| methyltransferase GidB [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 240
Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D+ +L N+ +E+ +Y L L+W++K+NL + + D ++H DSL
Sbjct: 4 DNIDLLIKGAESLGVNLQLFHVEQFIKYYDLLLEWNQKMNLTAITEERDVVVKHFLDSLT 63
Query: 65 --VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + ID+G+G GFP I I S++ + +++S K+ FL +VQ+
Sbjct: 64 AKICKKINGNERIIDVGAGAGFPSIPLKILYPSLK---LTIVDSLKKRTVFLNELVQQLH 120
Query: 123 AR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ R ++ + + D+ +RA+A L+ LLEY P++
Sbjct: 121 LNDVEIIHGRAEDLGKDNSLREKFDISLSRAVAQLNILLEYCIPFVK 167
>gi|227509064|ref|ZP_03939113.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191451|gb|EEI71518.1| glucose-inhibited division protein B [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 245
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----Q 67
+ L V+ + L + + ++ L + ++ +NL + + + +++H DS+ Q
Sbjct: 8 SALLAQNIQVTDDQLGQFDAYFKLLVATNEHVNLTTITEKSEVYLKHFYDSITPAFFVSQ 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK 126
+ P D+G+G GFP I I ++ + +++S NK+ FL +VQ+ +
Sbjct: 68 IREQPVSICDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRIHFLTELVQQLHLKDVT 124
Query: 127 VFACRIQEAPQM----ITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + D+++ARA+A L L E P +
Sbjct: 125 LVHARAEEFGNKKSASRQSFDIVTARAVARLSVLSELCLPLVK 167
>gi|290579746|ref|YP_003484138.1| putative glucose-inhibited division protein [Streptococcus mutans
NN2025]
gi|254996645|dbj|BAH87246.1| putative glucose-inhibited division protein [Streptococcus mutans
NN2025]
Length = 237
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + N+S + E+ + ++ L ++W+ KINL + + ++ +++H DS+
Sbjct: 2 TPEEFYQALAKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIAP 61
Query: 66 F---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G+G GFP + I ++ V +I+S NK+ FL +
Sbjct: 62 LLSGYIPNESLKLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRIKFLNLLADALE 118
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ + R ++ Q D+++ARA+A L L E + P+L
Sbjct: 119 LDKVHFYHGRAEDFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLK 165
>gi|312115376|ref|YP_004012972.1| methyltransferase GidB [Rhodomicrobium vannielii ATCC 17100]
gi|311220505|gb|ADP71873.1| methyltransferase GidB [Rhodomicrobium vannielii ATCC 17100]
Length = 226
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I A T+ VS ET+EKLE + L ++W K +NLV+ T+ W RH DS ++
Sbjct: 11 DIKSAAEFARTFRVSHETVEKLELYEKLLMQWQKAVNLVAPKTIPQIWQRHFADSAQLVA 70
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P W+DLGSGGGFPG+ +I +++ E V+L+ES +K +FL V ++T A +
Sbjct: 71 LAPGARTWVDLGSGGGFPGLAIAIMIANQKECACVHLVESNARKCAFLSEVARRTGAPAR 130
Query: 127 VFACRIQEAPQM--ITTCDVISARALADLDTLLEYSFPW 163
V RI +A M + DV++ARALA LD LLE + P+
Sbjct: 131 VHNMRIADAAAMGAVPVADVVTARALASLDALLELALPF 169
>gi|332687257|ref|YP_004457031.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
gi|332371266|dbj|BAK22222.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Melissococcus plutonius ATCC 35311]
Length = 238
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
++ +++ + +Y L ++W++K+NL + E +++H DS+ + +
Sbjct: 14 NIALTDYQMKQFDSYYKLLIEWNQKMNLTTILNKEAVYLKHFYDSISLAFFANFKGRHSL 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
D+G+G GFP I I ++ + +I+S NK+ SFL +V + ++ R +
Sbjct: 74 CDIGAGAGFPSIPLKILFPDLQ---ITIIDSLNKRISFLTELVNQLEMDHVFLYHERAEV 130
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
Q D ++ARA+A L+ L E P + ++
Sbjct: 131 FGQDSTFRGQFDYVTARAVARLNVLSELCLPLVRKE 166
>gi|291543433|emb|CBL16542.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus sp. 18P13]
Length = 235
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
++ E EKL+ + +++++K+NL + + ED I+H DS+ + + P +
Sbjct: 16 ELELTPECYEKLDCYASFLVEYNEKVNLTALTAPEDVLIKHFLDSMLLTKYIEIPLGAAL 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+G+G GFP + + + V L++S NK+ FL+ + +K + R +EA
Sbjct: 76 IDVGTGAGFPSVPVLLLRQDLH---VTLLDSLNKRIVFLQLLAEKLGLEVRCIHGRAEEA 132
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P++ DV +ARA+A L TL EY P++
Sbjct: 133 ARKPELREKFDVATARAVAALPTLAEYCLPFVKP 166
>gi|315650202|ref|ZP_07903277.1| glucose inhibited division protein B [Eubacterium saburreum DSM
3986]
gi|315487559|gb|EFU77867.1| glucose inhibited division protein B [Eubacterium saburreum DSM
3986]
Length = 241
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 12/171 (7%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
Y D + L + +L+T +S E EKL FY + ++ +K +NL S + + + +H DS
Sbjct: 2 YNDMDKYLSESNILDTV-LSDEKKEKLYRFYKILIEKNKVMNLTSITDIRECTYKHFIDS 60
Query: 63 LRVFQLHPY----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + +L DLG+G GFPGI +I ++ ++LI+S NK+ F++ V
Sbjct: 61 IAIEKLVKDIGEREYSVADLGTGAGFPGIPLAIAFPNLR---LDLIDSLNKRVKFIQEVC 117
Query: 119 QKTAARGKV-FACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R + + + D+ +RA+A+L +L EY P +
Sbjct: 118 EALELKNVTSIHSRAENIAKDKKYREKFDICVSRAVANLASLSEYCLPLVK 168
>gi|254805766|ref|YP_003083987.1| glucose inhibited division protein B [Neisseria meningitidis
alpha14]
gi|254669308|emb|CBA08305.1| glucose inhibited division protein B [Neisseria meningitidis
alpha14]
gi|325129108|gb|EGC51957.1| methyltransferase GidB [Neisseria meningitidis N1568]
gi|325133104|gb|EGC55776.1| methyltransferase GidB [Neisseria meningitidis M6190]
gi|325137023|gb|EGC59619.1| methyltransferase GidB [Neisseria meningitidis M0579]
gi|325139082|gb|EGC61628.1| methyltransferase GidB [Neisseria meningitidis ES14902]
gi|325141204|gb|EGC63704.1| methyltransferase GidB [Neisseria meningitidis CU385]
gi|325197477|gb|ADY92933.1| methyltransferase GidB [Neisseria meningitidis G2136]
gi|325203311|gb|ADY98764.1| methyltransferase GidB [Neisseria meningitidis M01-240355]
Length = 207
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|227524955|ref|ZP_03955004.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
gi|227087867|gb|EEI23179.1| glucose-inhibited division protein B [Lactobacillus hilgardii ATCC
8290]
Length = 244
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QL 68
L V+ + L + + ++ L ++ ++ +NL + + + +++H DS+ Q+
Sbjct: 9 ALLEQNIQVTDDQLGQFDAYFKLLVRTNEHVNLTTITEKSEVYLKHFYDSITPAFFVSQI 68
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKV 127
P D+G+G GFP I I ++ + +++S NK+ +FL +VQ+ + +
Sbjct: 69 REQPVSLCDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRINFLTELVQQLNLKDVTL 125
Query: 128 FACRIQEAPQM----ITTCDVISARALADLDTLLEYSFPWLY 165
R +E + D+++ARA+A L L E P +
Sbjct: 126 VHARAEEFGNKKSVSRQSFDIVTARAVARLGVLSELCLPLVR 167
>gi|325694167|gb|EGD36085.1| glucose inhibited division protein B [Streptococcus sanguinis
SK150]
Length = 237
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELNDRQKDQFGRYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEEIGLDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQILSELTIPYLK 165
>gi|167751434|ref|ZP_02423561.1| hypothetical protein EUBSIR_02430 [Eubacterium siraeum DSM 15702]
gi|167655680|gb|EDR99809.1| hypothetical protein EUBSIR_02430 [Eubacterium siraeum DSM 15702]
Length = 232
Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+S++ +KL Y +++++ +NL + + E+ ++H DS+ F + S +
Sbjct: 15 NIELSQDKADKLLKLYEFLVEYNQNVNLTAITDFEEVVVKHFIDSVLPFSMIDIKENSSF 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
ID+G+G GFP I I ++G L+E+ NK+ FL + T KV R ++
Sbjct: 75 IDVGTGAGFPSIPLMIVRPDLKGT---LLEALNKRCVFLEKACELTEVDAKVIHGRAEDY 131
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
A + D +ARA+A + L EY P++
Sbjct: 132 AKEKREAFDFATARAVAAMPVLCEYCIPYVK 162
>gi|323467284|gb|ADX70971.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
gi|323467327|gb|ADX71014.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
helveticus H10]
Length = 240
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + ++ + E+ + ++ ++ ++ +NL + + +++H DS+
Sbjct: 2 NPEKFILELSKHNFVLTDKQKEQFKLYFKFLIEVNEHVNLTRITEENEVYLKHFYDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + D+G+G GFP I I S++ V +++S K+ +FL+ ++ K
Sbjct: 62 LFVFGDVFKDGATLCDVGAGAGFPSIPLKILKPSLK---VTIVDSLAKRLTFLKDLIAKL 118
Query: 122 AARG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A + L EY P + +
Sbjct: 119 GLDNVELVHGRAEDVGQNKLYREKFDIVTARAIAKMSVLSEYCLPLVKK 167
>gi|121634065|ref|YP_974310.1| glucose-inhibited division protein B [Neisseria meningitidis FAM18]
gi|166224599|sp|A1KRM2|RSMG_NEIMF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120865771|emb|CAM09500.1| glucose inhibited division protein B [Neisseria meningitidis FAM18]
Length = 207
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTGHLLKD 159
>gi|309379103|emb|CBX22234.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 207
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DVI++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVITSRAFAELADFVSWTGHLLKD 159
>gi|326797438|ref|YP_004315258.1| ribosomal RNA small subunit methyltransferase G [Marinomonas
mediterranea MMB-1]
gi|326548202|gb|ADZ93422.1| Ribosomal RNA small subunit methyltransferase G [Marinomonas
mediterranea MMB-1]
Length = 208
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 4/156 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+++ L ++S TLE+L + L KW+K NL + + H+ DSL
Sbjct: 5 EMIQKGALDLGLSLSENTLEQLGRYLELLQKWNKAYNLTAIREADQMVSLHLIDSLSTVP 64
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
ID+G+G G PG++ +I L L++S KK FL V
Sbjct: 65 FIK-GDKIIDVGTGPGLPGMVLAICLPE---KSFTLLDSNGKKTRFLTQVKMDLGLENVT 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A E D + +RA A L+ ++ + P
Sbjct: 121 VANERVEKHANQGQYDHVISRAFASLEDMINWCLPL 156
>gi|15676117|ref|NP_273248.1| glucose-inhibited division protein B [Neisseria meningitidis MC58]
gi|20177905|sp|Q9K1G3|RSMG_NEIMB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|7225410|gb|AAF40647.1| glucose inhibited division protein B [Neisseria meningitidis MC58]
gi|325145386|gb|EGC67663.1| methyltransferase GidB [Neisseria meningitidis M01-240013]
gi|325199402|gb|ADY94857.1| methyltransferase GidB [Neisseria meningitidis H44/76]
gi|325205282|gb|ADZ00735.1| methyltransferase GidB [Neisseria meningitidis M04-240196]
Length = 207
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISETAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|167038667|ref|YP_001666245.1| 16S rRNA methyltransferase GidB [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320117059|ref|YP_004187218.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|193806452|sp|B0K8H7|RSMG_THEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166857501|gb|ABY95909.1| methyltransferase GidB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930150|gb|ADV80835.1| methyltransferase GidB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 240
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HP 70
L ++V E + +Y L L+W++K+NL + + + I+H DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 72 EEEKIIDVGTGAGFPCIPLKIVFPKLKAT---LLDSSKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSMARAVAPLNILLEYTLPFVK 167
>gi|227511970|ref|ZP_03942019.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
gi|227084778|gb|EEI20090.1| glucose-inhibited division protein B [Lactobacillus buchneri ATCC
11577]
Length = 244
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----QL 68
L V+ + L + + ++ L ++ ++ +NL + + + +++H DS+ Q+
Sbjct: 9 ALLEQNIQVTDDQLGQFDAYFKLLVRTNEHVNLTTITEKSEVYLKHFYDSITPAFFVSQI 68
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P D+G+G GFP I I ++ + +++S NK+ +FL +VQ+ +
Sbjct: 69 REQPVSLCDVGAGAGFPSIPLKILFPQLK---ITIVDSLNKRINFLTELVQQLNLKDVTL 125
Query: 129 -ACRIQEAPQM----ITTCDVISARALADLDTLLEYSFPWLY 165
R +E + D+++ARA+A L L E P +
Sbjct: 126 AHARAEEFGNKKSVSRQSFDIVTARAVARLGVLSELCLPLVR 167
>gi|148982410|ref|ZP_01816748.1| glucose-inhibited division protein B [Vibrionales bacterium SWAT-3]
gi|145960492|gb|EDK25862.1| glucose-inhibited division protein B [Vibrionales bacterium SWAT-3]
Length = 217
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
VS + +L + L KW+K NL S + ++H+ DS+ + H +ID+
Sbjct: 24 LEVSEKQRSQLVGYVELLNKWNKAYNLTSVRDPLEMMVKHILDSI-IVSTHLQGKRFIDV 82
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G G PGI SI E L++S K+ F++ VV + V R++E Q
Sbjct: 83 GTGPGLPGIPLSIMNPDSE---FYLLDSLGKRIRFIKQVVHELGIDNVVPVQSRVEEF-Q 138
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A + ++E+ ++
Sbjct: 139 PEEKFDAVLSRAFASMTDMVEWCHHLPKEQ 168
>gi|222152552|ref|YP_002561727.1| 16S rRNA methyltransferase GidB [Streptococcus uberis 0140J]
gi|254766906|sp|B9DTP3|RSMG_STRU0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222113363|emb|CAR40979.1| methyltransferase GidB [Streptococcus uberis 0140J]
Length = 237
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPSIW 75
+++ E+ + ++ ++W+ KINL + + D +++H DS+ + P
Sbjct: 15 IHLNDFQKEQFDIYFQTLVEWNDKINLTAITEKNDVYLKHFYDSIAPILHGYIKNEPIKL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
+D+G+G GFP I I ++ + +I+S NK+ +FL+ + + G F R ++
Sbjct: 75 LDIGAGAGFPSIPMKIIYPQLD---ITIIDSLNKRITFLKQLSEVLHLEGVHFFHGRAED 131
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLY 165
Q D+++ARA+A + L E + P+L
Sbjct: 132 FGQDINFRAQFDIVTARAVARMQILSELTIPFLK 165
>gi|289168084|ref|YP_003446353.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
gi|288907651|emb|CBJ22488.1| methyltransferase GidB (glucose inhibited division protein B)
[Streptococcus mitis B6]
Length = 237
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI-WIDLGSGGG 83
E+ E ++ L ++W++KINL + + ++ +++H DS+ L P +I +D+G+G G
Sbjct: 23 EQFERYFELLVEWNEKINLTAITDKDEVYLKHFYDSIAPILQGLIPNETIKLLDIGAGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ---MI 139
FP + I ++ V +I+S NK+ +FL+ + Q+ G F R ++ Q
Sbjct: 83 FPSLPMKILYPQLD---VTIIDSLNKRINFLQLLAQELNLEGVHFYHGRAEDFAQDKNFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D ++ARA+A + L E + P+L
Sbjct: 140 AQYDFVTARAVARMQVLSELTIPYLK 165
>gi|148381578|ref|YP_001256119.1| methyltransferase GidB [Clostridium botulinum A str. ATCC 3502]
gi|153934180|ref|YP_001385955.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|153936099|ref|YP_001389362.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
gi|166224583|sp|A7FPL8|RSMG_CLOB1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224584|sp|A5I814|RSMG_CLOBH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148291062|emb|CAL85199.1| methyltransferase [Clostridium botulinum A str. ATCC 3502]
gi|152930224|gb|ABS35724.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. ATCC
19397]
gi|152932013|gb|ABS37512.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A str. Hall]
Length = 239
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL++ + + + +L + L +W+KKINL + ++ +H D +++F+
Sbjct: 6 ILQSACNDVNLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKS 65
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ID+G+G GFPGI I IE + L++S K+ +FL V+ + +
Sbjct: 66 SPIGEAKSLIDIGTGAGFPGIPIKILKEDIE---ITLLDSLQKRINFLNTVIGELQLKNI 122
Query: 126 KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q D+ +RA+A+L L E+ P++ +
Sbjct: 123 QCLHGRAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|291558324|emb|CBL35441.1| 16S rRNA methyltransferase GidB [Eubacterium siraeum V10Sc8a]
Length = 232
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+S++ +KL Y ++++K +NL + + E+ ++H DS+ F + S +
Sbjct: 15 NIKLSQDKADKLLKLYEFLVEYNKNVNLTAITDFEEVVVKHFIDSVLPFSMIDIKENSSF 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
ID+G+G GFP I I ++G L+E+ NK+ FL + T KV R ++
Sbjct: 75 IDVGTGAGFPSIPLMIVRPDLKGT---LLEALNKRCVFLEKACELTEVDAKVIHGRAEDY 131
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
A + D +ARA+A + L EY P++
Sbjct: 132 AKEKREAFDFATARAVAAMPVLCEYCIPYVK 162
>gi|297545650|ref|YP_003677952.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843425|gb|ADH61941.1| methyltransferase GidB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 240
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-- 68
+ + ++V E +Y L L+W+KK+NL + + + I+H DSL V +
Sbjct: 15 KLGIFMEMFHV-----EHFHKYYSLLLEWNKKMNLTAITEESEVVIKHFLDSLSVVKSGK 69
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKV 127
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 70 IKGEEKIIDVGTGAGFPSIPLKIVFPKLKAT---LLDSSKKRITFLEEVINKLDINEIEL 126
Query: 128 FACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 127 IHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVK 167
>gi|289579528|ref|YP_003478155.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
gi|289529241|gb|ADD03593.1| methyltransferase GidB [Thermoanaerobacter italicus Ab9]
Length = 240
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-- 68
+ + ++V E +Y L L+W+KK+NL + + + I+H DSL V +
Sbjct: 15 KLGIFMEMFHV-----EHFHKYYSLLLEWNKKMNLTAITEESEVVIKHFLDSLSVVKSGK 69
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKV 127
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 70 IQGEEKIIDVGTGAGFPSIPLKIVFPKLKAT---LLDSSKKRITFLEEVINKLDINEIEL 126
Query: 128 FACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 127 IHGRAEDIGKDIKYREQFDLSVARAVAPLNILLEYTLPFVK 167
>gi|256751462|ref|ZP_05492340.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
gi|256749681|gb|EEU62707.1| methyltransferase GidB [Thermoanaerobacter ethanolicus CCSD1]
Length = 240
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HP 70
L ++V E + +Y L L+W++K+NL + + + I+H DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHFLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 72 EEEKIIDVGTGAGFPCIPLKIVFPKLKAT---LLDSSKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSMARAVAPLNILLEYTLPFVK 167
>gi|256851845|ref|ZP_05557233.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260661894|ref|ZP_05862804.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|282931977|ref|ZP_06337441.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|297205469|ref|ZP_06922865.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
gi|256615803|gb|EEU20992.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 27-2-CHN]
gi|260547363|gb|EEX23343.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 115-3-CHN]
gi|281303919|gb|EFA96057.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|297150047|gb|EFH30344.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii JV-V16]
Length = 239
Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + +S++ +++ +Y ++ ++ +NL + +E+ +++H DSL F
Sbjct: 3 PELFIKQLAEKGFALSQKQIDQFSKYYQKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPF 62
Query: 67 QLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+P + D+G+G GFP I I + ++ +V +S NK+ FL +
Sbjct: 63 LEYPELFKKARICDVGAGAGFPSIPIKILVPEMQLAIV---DSLNKRLKFLADLTADLDL 119
Query: 124 -RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ R ++ Q D+++ARA+A++ TL EY P + +
Sbjct: 120 GQVELVHGRAEDIGQNVKYREKFDLVTARAVANMATLSEYCLPLVKE 166
>gi|319404910|emb|CBI78511.1| glucose inhibited division protein B [Bartonella rochalimae ATCC
BAA-1498]
Length = 219
Score = 174 bits (443), Expect = 2e-42, Method: Composition-based stats.
Identities = 66/148 (44%), Positives = 95/148 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L F L ++W+ INL+S++T+ W RH+ DS +++ L W DLG
Sbjct: 18 SVSRETMKHLIEFESLVIQWNIHINLISATTIPVLWKRHILDSAQIYPLKSQFLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L +GG ++L+ES KKA+FL+ V+ K V CRI++ + I
Sbjct: 78 SGGGFPAIVLAIFLKEKKGGHIDLVESNGKKAAFLQNVIAKLNLPATVHHCRIEDVYKKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
T D+++AR LA LDTLL PWL QK
Sbjct: 138 KTPDILTARGLASLDTLLHLMSPWLTQK 165
>gi|210624044|ref|ZP_03294161.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
gi|210153251|gb|EEA84257.1| hypothetical protein CLOHIR_02113 [Clostridium hiranonis DSM 13275]
Length = 241
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +L+ +TL++ + L +W++K+NL + +I+H DS+
Sbjct: 5 NRELLKNGIEDFGLTADDKTLDRFRMYRELLAEWNRKMNLTGIDDEKGTYIKHFLDSVSA 64
Query: 66 FQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G GFPG+ + +E V L++S NK+ +FL+ V +
Sbjct: 65 VKGGYIKDGMSIIDVGTGAGFPGVPLKVC---LENTKVTLLDSLNKRINFLQEVCNQLEL 121
Query: 124 -RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P DV +ARA+A L L+E+ P++
Sbjct: 122 EDVEFIHGRAEDFGKNPDYREQYDVATARAVAGLPILMEFCVPFIK 167
>gi|168183719|ref|ZP_02618383.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|237797098|ref|YP_002864650.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
gi|259495491|sp|C3KWJ3|RSMG_CLOB6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|182673204|gb|EDT85165.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Bf]
gi|229261829|gb|ACQ52862.1| 16S rRNA methyltransferase GidB [Clostridium botulinum Ba4 str.
657]
Length = 239
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL++ + + + + + L +W+KKINL + E+ +H D +++F+
Sbjct: 6 ILQSACNDVNLDFNDKKYNQFISYKNLIQEWNKKINLTAIVEDEEIIKKHFIDCIKIFKS 65
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ID+G+G GFPGI I IE + L++S K+ +FL V+ + +
Sbjct: 66 SPIGEAKSLIDIGTGAGFPGIPIKILKEDIE---ITLLDSLQKRINFLNIVIGELQLKNI 122
Query: 126 KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q D+ +RA+A+L L E+ P++ +
Sbjct: 123 QCLHGRAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|328471204|gb|EGF42106.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus 10329]
Length = 211
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +VS + E+L + L KW+K NL S + ++H+ DS+ V H
Sbjct: 8 LDSLIAQTDLDVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VVGTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LQGERFIDVGTGPGLPGIPLAIMHPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTPI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E Q D + +RA A + ++E+ ++
Sbjct: 124 QSRVEEF-QPEEKFDGVLSRAFASMTDMVEWCHHLPKEQ 161
>gi|20809123|ref|NP_624294.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Thermoanaerobacter tengcongensis MB4]
gi|254479393|ref|ZP_05092726.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
gi|22095716|sp|Q8R6L0|RSMG_THETN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|20517803|gb|AAM25898.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Thermoanaerobacter
tengcongensis MB4]
gi|214034662|gb|EEB75403.1| methyltransferase GidB [Carboxydibrachium pacificum DSM 12653]
Length = 239
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDLGSGGG 83
+E + FY L L+W++K+NL + + E+ I+H DSL V + ID+G+G G
Sbjct: 25 VEHFQKFYSLLLEWNQKMNLTAITEEEEVVIKHFLDSLSVIKSGKIKGGEKVIDIGTGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---APQMI 139
FPGI I I + L+E+ KK +FL ++ Q G +V R +E +
Sbjct: 85 FPGIPLKIVFPEI---GLTLLEASKKKVNFLNFLSQVLLFEGIEVIHGRAEELGKVERFR 141
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D+ +ARA+A L+ LLEY+ P++
Sbjct: 142 EKFDIATARAVAPLNILLEYAVPFVR 167
>gi|298252131|ref|ZP_06975934.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
gi|297546723|gb|EFH80591.1| methyltransferase GidB [Ktedonobacter racemifer DSM 44963]
Length = 247
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--S 73
L +S E + L+W+ + NL + E+ +H DSL + ++P +
Sbjct: 21 LQRLGLSGELEAAFLRYRQELLEWNTRFNLTAIKDPEEVMTKHFLDSLSLLAIYPQDEAT 80
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFPG+ + V L+E+ NKK +FLR++V +V R
Sbjct: 81 TLLDIGTGPGFPGLPLKMARPRWR---VTLVEATNKKVTFLRHMVDVLELEHVEVIHGRA 137
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+E Q + D+++ARA+A L LLEY P+
Sbjct: 138 EELGQKAAYRSAFDLVTARAVAALPALLEYCAPYCR 173
>gi|254230610|ref|ZP_04923969.1| methyltransferase GidB [Vibrio sp. Ex25]
gi|262392794|ref|YP_003284648.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. Ex25]
gi|151936870|gb|EDN55769.1| methyltransferase GidB [Vibrio sp. Ex25]
gi|262336388|gb|ACY50183.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. Ex25]
Length = 211
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L + VS + E+L + L KW+K NL S D ++H+ DS+ V
Sbjct: 5 RTKLDSLIAKTDLEVSEQQREQLVGYVELLDKWNKAYNLTSVRDPLDMLVKHILDSIVVS 64
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
P +ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 65 THLP-GERFIDVGTGPGLPGIPLAIMNPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNV 120
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E Q D + +RA A + ++E+ Q+
Sbjct: 121 TPIQSRVEEF-QPEEKFDGVLSRAFASMTDMVEWCHHLPKQE 161
>gi|309792061|ref|ZP_07686535.1| methyltransferase GidB [Oscillochloris trichoides DG6]
gi|308225868|gb|EFO79622.1| methyltransferase GidB [Oscillochloris trichoides DG6]
Length = 238
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+++L N++ L++L ++ L +W+++INL + + + + + RH DSL +
Sbjct: 5 PHNLLVQTCSDWGLNLNPTQLDQLAHYAQLLREWNERINLTTITDLGEIYRRHFLDSLSL 64
Query: 66 FQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ P +D+GSG GFPG++ I + + L+ES KKA F+R+V ++
Sbjct: 65 ARFWGTGPQSLVDIGSGAGFPGLVLKILRPELR---LTLVESVGKKAEFMRHVARELNLY 121
Query: 124 RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
+V R ++ + D+++ARA+A+L L+EY+ P L
Sbjct: 122 AVRVLDVRAEDVGRNAAERAKHDLVTARAVAELRVLVEYALPLL 165
>gi|307265445|ref|ZP_07547001.1| methyltransferase GidB [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919559|gb|EFN49777.1| methyltransferase GidB [Thermoanaerobacter wiegelii Rt8.B1]
Length = 240
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HP 70
L ++V E + +Y L L+W++K+NL + + + I+H+ DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHLLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L++S K+ +FL V+ K ++
Sbjct: 72 GEEKIIDVGTGAGFPSIPLKIVFPKLKAT---LLDSSKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWL 164
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSVARAVAPLNVLLEYTLPFV 166
>gi|28899853|ref|NP_799458.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus RIMD
2210633]
gi|153838483|ref|ZP_01991150.1| methyltransferase GidB [Vibrio parahaemolyticus AQ3810]
gi|260361981|ref|ZP_05774986.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus K5030]
gi|260876532|ref|ZP_05888887.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AN-5034]
gi|260897411|ref|ZP_05905907.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus Peru-466]
gi|260902396|ref|ZP_05910791.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AQ4037]
gi|31076671|sp|Q87K99|RSMG_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28808105|dbj|BAC61342.1| glucose inhibited division protein B [Vibrio parahaemolyticus RIMD
2210633]
gi|149748106|gb|EDM58965.1| methyltransferase GidB [Vibrio parahaemolyticus AQ3810]
gi|308087900|gb|EFO37595.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus Peru-466]
gi|308090351|gb|EFO40046.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AN-5034]
gi|308107140|gb|EFO44680.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus AQ4037]
gi|308114160|gb|EFO51700.1| 16S rRNA methyltransferase GidB [Vibrio parahaemolyticus K5030]
Length = 211
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L + +VS + E+L + L KW+K NL S + ++H+ DS+ V
Sbjct: 5 RTKLDSLIAQTDLDVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSI-VV 63
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H +ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 64 GTHLQGERFIDVGTGPGLPGIPLAIMHPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNV 120
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E Q D + +RA A + ++E+ ++
Sbjct: 121 TPIQSRVEEF-QPEEKFDGVLSRAFASMTDMVEWCHHLPKEQ 161
>gi|296840695|ref|ZP_06863230.2| 16S rRNA methyltransferase GidB [Neisseria polysaccharea ATCC
43768]
gi|296840209|gb|EFH24147.1| 16S rRNA methyltransferase GidB [Neisseria polysaccharea ATCC
43768]
Length = 238
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ + LR ++S ++L + L KW+K NL + E + H+ D
Sbjct: 30 RDMERKERLRTGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMVVHHLLD 89
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 90 SLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIEL 146
Query: 122 AARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 147 GLDNVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTAHLLKD 190
>gi|91229125|ref|ZP_01262898.1| glucose-inhibited division protein B [Vibrio alginolyticus 12G01]
gi|269965287|ref|ZP_06179408.1| Glucose inhibited division protein [Vibrio alginolyticus 40B]
gi|91187437|gb|EAS73780.1| glucose-inhibited division protein B [Vibrio alginolyticus 12G01]
gi|269830088|gb|EEZ84316.1| Glucose inhibited division protein [Vibrio alginolyticus 40B]
Length = 211
Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L + VS + E+L + L KW+K NL S D ++H+ DS+ V
Sbjct: 5 RTKLDSLIAKTDLEVSEQQREQLVGYVELLDKWNKAYNLTSVRDPLDMLVKHILDSIVVS 64
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
P +ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 65 AHLP-GERFIDVGTGPGLPGIPLAIMNPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNV 120
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E Q D + +RA A + ++E+ Q+
Sbjct: 121 TPIQSRVEEF-QPEEKFDGVLSRAFASMTDMVEWCHHLPKQE 161
>gi|227498806|ref|ZP_03928946.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
gi|226904258|gb|EEH90176.1| ribosomal RNA small subunit methyltransferase G [Acidaminococcus
sp. D21]
Length = 239
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ + +S E L + E + L+ ++ +NL + + E+ ++H+ DSL ++
Sbjct: 2 ETLKQSAEAIGLTLSDEALRRFEIYKDELLETNRFLNLTAITDPEEVAVKHMVDSLTIYN 61
Query: 68 LHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ D+G+G GFPG+ I ++ + LI+S K+ +FL V + +
Sbjct: 62 EKRFHNRTIADVGTGAGFPGLPLKIYDPTMR---LTLIDSLAKRLAFLEKVAKDMGLGQI 118
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +EA P++ DV+ ARA+A + L EY P +
Sbjct: 119 RCHHARAEEAGRDPKLREKFDVVVARAVAPMPVLAEYCLPLVR 161
>gi|24380281|ref|NP_722236.1| 16S rRNA methyltransferase GidB [Streptococcus mutans UA159]
gi|20177893|sp|Q93D95|RSMG_STRMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|15625438|gb|AAL04086.1|AF397166_11 GidB [Streptococcus mutans]
gi|24378293|gb|AAN59542.1|AE015017_8 putative glucose-inhibited division protein [Streptococcus mutans
UA159]
Length = 237
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + N+S + E+ + ++ L ++W+ KINL + + ++ +++H DS+
Sbjct: 2 TPEEFYQALAKHHINLSAKQKEQFDLYFKLLVEWNDKINLTAITEEKEVYLKHFYDSIAP 61
Query: 66 F---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G+G GFP + I ++ V +I+S NK+ FL +
Sbjct: 62 LLSGYIPNESLKLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRIKFLNLLADALE 118
Query: 123 A-RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R + + D+++ARA+A L L E + P+L
Sbjct: 119 LDKVHFYHGRAEVFGQDKNFRAHFDLVTARAVARLQVLSELTIPFLK 165
>gi|153938497|ref|YP_001392997.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|170754945|ref|YP_001783276.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|166224585|sp|A7GJN7|RSMG_CLOBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806440|sp|B1IHR7|RSMG_CLOBK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152934393|gb|ABS39891.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
Langeland]
gi|169120157|gb|ACA43993.1| 16S rRNA methyltransferase GidB [Clostridium botulinum B1 str.
Okra]
gi|295320972|gb|ADG01350.1| 16S rRNA methyltransferase GidB [Clostridium botulinum F str.
230613]
Length = 239
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL++ + + + +L + L +W+KKINL + ++ +H D +++F+
Sbjct: 6 ILQSACNDVNLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKS 65
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ID+G+G GFPGI I IE + L++S K+ +FL V+ + +
Sbjct: 66 SPIGEAKSLIDIGTGAGFPGIPIKILKEDIE---ITLLDSLQKRINFLNIVIGELQLKNI 122
Query: 126 KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q D+ +RA+A+L L E+ P++ +
Sbjct: 123 QCLHGRAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|320162408|ref|YP_004175633.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
gi|319996262|dbj|BAJ65033.1| methyltransferase GidB [Anaerolinea thermophila UNI-1]
Length = 246
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-- 63
++R L +S +E L + L+W++++NL + V ++H DS
Sbjct: 5 MEDLVRYAASLFDLTLSARQVEALRIYEQELLEWNERMNLTAIRDVPGIRVKHFLDSFSC 64
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P+ ID+G+G GFPGI I S+ + L++S KK F R+VVQK
Sbjct: 65 ALAWRDNPPASLIDIGTGAGFPGIPLKILYPSMR---LTLVDSVGKKVDFCRHVVQKLGL 121
Query: 124 -RGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R + R +E PQ D ARA+A ++ L EY P +
Sbjct: 122 DRVEALQARAEELGQNPQYREKYDCAVARAVAQMNILAEYLLPLVR 167
>gi|319407870|emb|CBI81523.1| glucose inhibited division protein B [Bartonella sp. 1-1C]
Length = 219
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 67/148 (45%), Positives = 94/148 (63%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L F L ++W+ INL+S++T+ W RH+ DS +++ L W DLG
Sbjct: 18 SVSRETMKHLIEFESLVIQWNIHINLISATTIPVLWKRHILDSAQIYPLKSQFLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L +GG ++L+ES KKA+FLR V+ K V CRI+ + I
Sbjct: 78 SGGGFPAIVLAILLKEKKGGHIDLVESNGKKAAFLRNVIAKLNLPATVHHCRIENVYKKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
T D+++AR LA LDTLL PWL QK
Sbjct: 138 KTPDILTARGLASLDTLLHLMSPWLTQK 165
>gi|319411324|emb|CBY91735.1| methyltransferase GidB (glucose-inhibited division protein B)
[Neisseria meningitidis WUE 2594]
gi|325143203|gb|EGC65543.1| methyltransferase GidB [Neisseria meningitidis 961-5945]
Length = 207
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMVVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTAHLLKD 159
>gi|325135116|gb|EGC57743.1| methyltransferase GidB [Neisseria meningitidis M13399]
Length = 207
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISEMAQDRLLVYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|238753971|ref|ZP_04615330.1| Ribosomal RNA small subunit methyltransferase G [Yersinia ruckeri
ATCC 29473]
gi|238707723|gb|EEQ00082.1| Ribosomal RNA small subunit methyltransferase G [Yersinia ruckeri
ATCC 29473]
Length = 207
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + ++ + ++L + L KW+K NL S E IRH+ DS+ V H
Sbjct: 6 LESLLKIAGISLPDKQKQQLVGYVELLHKWNKAYNLTSVRDPEQMLIRHILDSI-VVNPH 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 65 LQGQRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLNNIEPV 121
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A LD +L +
Sbjct: 122 QSRVEDFSGEPG-FDGVISRAFASLDDMLSWCHHL 155
>gi|325684926|gb|EGD27070.1| glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 239
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L A L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFAETLSKYNFKLSPVQEQQFKTYFKELVRANEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P + D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAARGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
G + R ++ P D+++ARA+A + L EY P
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAK 166
>gi|283768650|ref|ZP_06341562.1| 16S rRNA methyltransferase GidB [Bulleidia extructa W1219]
gi|283105042|gb|EFC06414.1| 16S rRNA methyltransferase GidB [Bulleidia extructa W1219]
Length = 229
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+E + + L +W++++NL + + ++ +H D + W D+GSG GFP
Sbjct: 19 IESFQRYASLLQEWNERMNLTAITEEKEIIEKHFLDCILPLHHSVIQGHWADVGSGAGFP 78
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ-MITTCD 143
G++ I +E + LIE K+ FLR+V+ + + KV R ++ + D
Sbjct: 79 GLVWKIMKPELE---MTLIEPTGKRCQFLRHVINELQLEKIKVVNERAEDYAKLHREEFD 135
Query: 144 VISARALADLDTLLEYSFPWLY 165
++ARA+++L L E P +
Sbjct: 136 GVTARAVSNLPLLSELCIPLIK 157
>gi|42519771|ref|NP_965701.1| glucose-inhibited division protein B [Lactobacillus johnsonii NCC
533]
gi|268320135|ref|YP_003293791.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
gi|55976462|sp|Q74HM3|RSMG_LACJO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|41584061|gb|AAS09667.1| glucose inhibited division protein B [Lactobacillus johnsonii NCC
533]
gi|262398510|emb|CAX67524.1| glucose inhibited division protein B [Lactobacillus johnsonii
FI9785]
Length = 239
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ I + ++ + ++ +Y ++++KK+NL + + +++H DS+
Sbjct: 2 NPEIFAKELAKYGFELNEKQKKQFATYYDKLVEFNKKVNLTRITDKNEVYLKHFFDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L D+G+G GFP + I ++ + +++S K+ FL +V
Sbjct: 62 LLEFPDLFKGEKTLCDVGAGAGFPSLPIKILCPNL---SITIVDSLGKRLKFLDELVNDL 118
Query: 122 AA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+ + R ++A Q + D+++ RA+A + L EY P
Sbjct: 119 GLDKVTLVHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|168181108|ref|ZP_02615772.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
gi|182668128|gb|EDT80107.1| methyltransferase GidB [Clostridium botulinum NCTC 2916]
Length = 239
Score = 174 bits (441), Expect = 5e-42, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL++ + + + +L + L +W+KKINL + ++ +H D +++F+
Sbjct: 6 ILQSACNDVNLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKS 65
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ID+G+G GFPGI I IE + L++S K+ +FL V+ + +
Sbjct: 66 SPIGEAKSLIDIGTGAGFPGIPIKILKEDIE---ITLLDSLQKRINFLNIVIGELQLKNI 122
Query: 126 KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q D+ +RA+A+L L E+ P++ +
Sbjct: 123 QCLHGRAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|104774705|ref|YP_619685.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123251759|sp|Q1G8A5|RSMG_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|103423786|emb|CAI98794.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 239
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L A L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFAETLSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P + D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAARGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
G + R ++ P D+++ARA+A + L EY P
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPL 164
>gi|308188711|ref|YP_003932842.1| glucose inhibited division protein B [Pantoea vagans C9-1]
gi|308059221|gb|ADO11393.1| glucose inhibited division protein B [Pantoea vagans C9-1]
Length = 207
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S+L+A ++S + ++L + L KW+K NL S + +RH+ DS+ V
Sbjct: 7 SLLKAA----GISLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPQQMLVRHILDSIVVAP 62
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H S +ID+G+G G PGI +I + L++S K+ FLR V +
Sbjct: 63 -HLKGSRFIDVGTGPGLPGIPLAIVMPDAH---FTLLDSLGKRVRFLRQVQHELGLTNIT 118
Query: 128 -FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ P D + +RA A L ++ +
Sbjct: 119 PVQSRVEAFPAE-PPFDGVISRAFASLTDMVNWCHHL 154
>gi|49476316|ref|YP_034357.1| glucose-inhibited division protein B [Bartonella henselae str.
Houston-1]
gi|55976398|sp|Q6G1L0|RSMG_BARHE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49239124|emb|CAF28428.1| Glucose inhibited division protein b [Bartonella henselae str.
Houston-1]
Length = 215
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 67/148 (45%), Positives = 95/148 (64%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET++ L +F L ++W+K INL+SSST+ W RH+ DS +++ LH W DLG
Sbjct: 18 SVSRETMQDLMHFESLIIQWNKHINLISSSTIPLLWTRHILDSAQIYPLHSDLLHWCDLG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I + + G ++L+ES KK +FLR V+ + V+ CRI++ Q I
Sbjct: 78 SGGGFPAIVIAIFMKEKKTGHIDLVESNGKKVAFLRTVIAQLDLPATVYHCRIEDVTQKI 137
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
+VI+AR LA LD LL FP L QK
Sbjct: 138 KNPEVITARGLACLDDLLRLIFPLLTQK 165
>gi|288575860|ref|ZP_05977731.2| 16S rRNA methyltransferase GidB [Neisseria mucosa ATCC 25996]
gi|288566893|gb|EFC88453.1| 16S rRNA methyltransferase GidB [Neisseria mucosa ATCC 25996]
Length = 295
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L++ ++S E L + L KW+K NL + H+ DSL +
Sbjct: 95 LQSGIQALGLDLSAEQQTLLLAYTDLLKKWNKTYNLTALRDEAQMVSHHLLDSLTLLPYL 154
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
+D+GSGGG PGI T+I + + L+++ KK +FL+ V + +V
Sbjct: 155 QGAQTMLDVGSGGGQPGIPTAICHPDLN---ITLLDANTKKTAFLQQAVIELGLANVRVV 211
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ D+I++RA A+L + ++ L
Sbjct: 212 SGRVEAVQDF--QADIITSRAFAELADFVNWTAHLLKD 247
>gi|78486513|ref|YP_392438.1| methyltransferase GidB [Thiomicrospira crunogena XCL-2]
gi|123554883|sp|Q31DK9|RSMG_THICR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78364799|gb|ABB42764.1| Glucose inhibited division protein B [Thiomicrospira crunogena
XCL-2]
Length = 216
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ R + + + + + KL + L KW+K NL + V++ +I+H+ DSL V
Sbjct: 10 VARLDAAAEGFGLPKNDQAWSKLLDYLALLQKWNKTYNLTAIRDVDEMFIKHILDSLSVA 69
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
ID+G+GGG PGI +I + V+L++S +KK FL + +
Sbjct: 70 PYID-SERLIDVGTGGGLPGIPLAILFPERQ---VDLLDSNSKKTRFLVQAKAELGLKNV 125
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+V R++ A T D + +RA A LD +L ++ L +
Sbjct: 126 EVVHHRVE-AYHPETLYDGVVSRAFASLDDMLNWTHHLLKPQ 166
>gi|226951093|ref|YP_002806184.1| methyltransferase GidB [Clostridium botulinum A2 str. Kyoto]
gi|254766887|sp|C1FP29|RSMG_CLOBJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226842347|gb|ACO85013.1| methyltransferase GidB [Clostridium botulinum A2 str. Kyoto]
Length = 239
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL++ + + + +L + L +W+KKINL + ++ +H D +++F+
Sbjct: 6 ILQSACNDVNLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKS 65
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ID+G+G GFPGI I IE + L++S K+ +FL V+ + +
Sbjct: 66 SPIGEAKSLIDIGTGAGFPGIPIKILKEDIE---ITLLDSLQKRINFLNIVIGELQLKNI 122
Query: 126 KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q D+ +RA+A+L L E+ P++ +
Sbjct: 123 QCLHGRAEDYAQEIQHRQKYDIAVSRAVANLAVLSEFCIPFVEK 166
>gi|304385713|ref|ZP_07368057.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
gi|304328217|gb|EFL95439.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici DSM
20284]
Length = 243
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R + VS + + + +Y ++ ++ +NL + + ++ +++H DS+
Sbjct: 2 NPEEFRQALAERGWTVSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
Q D+G+G GFP + I L ++ V +++S NK+ FL+ +V +
Sbjct: 62 LLEAPQFFTPGIALCDVGAGAGFPSLPMKILLPELK---VTIVDSLNKRIKFLQALVDEL 118
Query: 122 AA-RGKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R + + +++ARA+A L L E P + Q
Sbjct: 119 GLTDVELVHDRAETFGAKKSAYRASFALVTARAVARLSVLSELCLPLVKQ 168
>gi|187777374|ref|ZP_02993847.1| hypothetical protein CLOSPO_00930 [Clostridium sporogenes ATCC
15579]
gi|187774302|gb|EDU38104.1| hypothetical protein CLOSPO_00930 [Clostridium sporogenes ATCC
15579]
Length = 239
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL++ + + + + + L +W+KKINL + E+ +H D +++F+
Sbjct: 6 ILQSACNDVNLDFNDKKYNQFISYKNLIQEWNKKINLTAIVKDEEIIKKHFIDCIKIFKA 65
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ID+G+G GFPGI I IE + L++S K+ +FL V+ + +
Sbjct: 66 SPMAEAKSLIDIGTGAGFPGIPIKILKEDIE---ITLLDSLQKRINFLNIVIGELQLKNI 122
Query: 126 KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q D+ +RA+A+L L E+ P++ +
Sbjct: 123 QCLHGRAEDYAQEIQHRQRYDIAVSRAVANLAVLSEFCIPFVRK 166
>gi|116514833|ref|YP_813739.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274435|sp|Q047S1|RSMG_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116094148|gb|ABJ59301.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|325126527|gb|ADY85857.1| Glucose inhibited division protein B [Lactobacillus delbrueckii
subsp. bulgaricus 2038]
Length = 239
Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L A L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFAETLSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P + D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAARGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
G + R ++ P D+++ARA+A + L EY P
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPL 164
>gi|227529772|ref|ZP_03959821.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
gi|227350256|gb|EEJ40547.1| glucose-inhibited division protein B [Lactobacillus vaginalis ATCC
49540]
Length = 253
Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + N+S +++ +Y L + ++ +NL + ++ +++H DS+
Sbjct: 14 NPEQFQQALAERGINLSDAQMKQFAEYYDLLVATNEHVNLTRITEKKEVYLKHFFDSISG 73
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP I I ++ V +++S NK+ FL+ +V +
Sbjct: 74 VFAEPKLMTDELTLCDIGAGAGFPSIPIKIAFPQLK---VTIVDSLNKRIIFLQELVDQL 130
Query: 122 AA-RGKVFACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
+ R + + D+++ARA+A L L E P
Sbjct: 131 GLSDVTLVHDRAETFSAKRSDHREQYDIVTARAVARLAVLSELCLP 176
>gi|254670411|emb|CBA05972.1| glucose inhibited division protein B [Neisseria meningitidis
alpha153]
Length = 207
Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ L++ ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLQSGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|304398009|ref|ZP_07379884.1| methyltransferase GidB [Pantoea sp. aB]
gi|304354295|gb|EFM18667.1| methyltransferase GidB [Pantoea sp. aB]
Length = 205
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S+L+A + ++S + ++L + L KW+K NL S E +RH+ DS+ V
Sbjct: 7 SLLKAA----SISLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPEQMLVRHILDSIVVAP 62
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
H S +ID+G+G G PGI +I + L++S K+ FLR V +
Sbjct: 63 -HLKGSRFIDVGTGPGLPGIPLAIVMPDAH---FTLLDSLGKRVRFLRQVQHELGLTNIT 118
Query: 128 -FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ P D + +RA A L ++ +
Sbjct: 119 PVQSRVEAFPAE-PPFDGVISRAFASLTDMVNWCHHL 154
>gi|170760430|ref|YP_001788983.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
gi|193806441|sp|B1KUB0|RSMG_CLOBM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169407419|gb|ACA55830.1| 16S rRNA methyltransferase GidB [Clostridium botulinum A3 str. Loch
Maree]
Length = 239
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL+++ + + + + + L +W+KK+NL + E+ +H D +++F+
Sbjct: 6 ILQSSCNDVNLDFNDKKYNQFISYKNLIQEWNKKVNLTAIVEDEEIIKKHFIDCIKIFKA 65
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ID+G+G GFPGI I I+ + L++S K+ +FL V+ +
Sbjct: 66 SPIGEAKSLIDIGTGAGFPGIPIKILREDIK---ITLLDSLQKRINFLNIVIGDLKLKDI 122
Query: 126 KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q DV +RA+A+L L E+ P++ +
Sbjct: 123 QCLHGRAEDYAQEAEHRQKYDVAVSRAVANLAVLSEFCIPFVKK 166
>gi|307243462|ref|ZP_07525618.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
gi|306493186|gb|EFM65183.1| 16S rRNA methyltransferase GidB [Peptostreptococcus stomatis DSM
17678]
Length = 242
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ +L+ + V +++ E + + +++++ +NL + + +I+H DS+
Sbjct: 5 IENIELLKKGLADFSILVDDLMVDRFEKYRQILVEYNQHMNLTGITEQREVYIKHFLDSV 64
Query: 64 RVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+F+ ID+G+G GFPG+ I +I + L++S NK+ +FL+ V Q+
Sbjct: 65 AIFKNGYIGDGLSVIDVGTGAGFPGLPFKICNPNIR---LTLLDSLNKRINFLKAVGQEL 121
Query: 122 AARGKV-FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
G R ++ P D+ +ARA+A L LLE P++
Sbjct: 122 GLDGIDYVHGRAEDMAHKPDHREKYDIATARAVASLPVLLELCVPYVR 169
>gi|313124635|ref|YP_004034894.1| ribosomal RNA small subunit methyltransferase g [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281198|gb|ADQ61917.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 239
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L A L + +S ++ + ++ ++ ++ +NL + ++ +++H DS+
Sbjct: 1 MNPELFAETLSKYNFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVT 60
Query: 65 VFQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L P + D+G+G GFP + I +E V +++S K+ +FL +++K
Sbjct: 61 PLLLWPEVFAEGAKLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEK 117
Query: 121 TAARGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
G + R ++ P D+++ARA+A + L EY P
Sbjct: 118 LGIEGVNLVHGRAEDVGQNPDYREKFDLVTARAVARMSVLSEYCLPLAK 166
>gi|291165907|gb|EFE27954.1| 16S rRNA methyltransferase GidB [Filifactor alocis ATCC 35896]
Length = 237
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
N+IL+ L ++ + + L+ +K +NL + + + + +H DSL
Sbjct: 3 NTILKDGLALWNQQITEQQEFDFHIYMQHLLEKNKVMNLTNITEENEIYTKHFLDSLSCL 62
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P S ID+G+G GFP + I ++ + L++S NK+ +FL+ V +
Sbjct: 63 SVYPIPKNSTVIDIGTGAGFPSVPIKIMRRDLK---MTLLDSLNKRINFLKEVGEVLHFE 119
Query: 125 GKVF-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ Q D +RA+A L LLEY+ P+L
Sbjct: 120 DMTYLHGRAEDLAQKAEYRQMYDFAVSRAVASLPVLLEYTIPFLK 164
>gi|261391726|emb|CAX49175.1| methyltransferase GidB (glucose-inhibited division protein B)
[Neisseria meningitidis 8013]
Length = 207
Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|308388408|gb|ADO30728.1| glucose inhibited division protein B [Neisseria meningitidis
alpha710]
gi|325131047|gb|EGC53772.1| methyltransferase GidB [Neisseria meningitidis OX99.30304]
gi|325202975|gb|ADY98429.1| methyltransferase GidB [Neisseria meningitidis M01-240149]
gi|325207227|gb|ADZ02679.1| methyltransferase GidB [Neisseria meningitidis NZ-05/33]
Length = 207
Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|326390370|ref|ZP_08211929.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
gi|325993647|gb|EGD52080.1| methyltransferase GidB [Thermoanaerobacter ethanolicus JW 200]
Length = 240
Score = 172 bits (438), Expect = 9e-42, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HP 70
L ++V E + +Y L L+W++K+NL + + + I+H+ DSL V +
Sbjct: 17 GIFLEMFHV-----EHFQKYYALLLEWNQKMNLTAITEESEVVIKHLLDSLSVVKSGKIK 71
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
ID+G+G GFP I I ++ L+++ K+ +FL V+ K ++
Sbjct: 72 GDEKIIDVGTGAGFPSIPLKIVFPKLKAT---LLDASKKRITFLEEVINKLGINEIELIH 128
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWL 164
R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 129 GRAEDIGKDIKYREQFDLSVARAVAPLNVLLEYTLPFV 166
>gi|255527594|ref|ZP_05394458.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296186792|ref|ZP_06855193.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
gi|255508727|gb|EET85103.1| methyltransferase GidB [Clostridium carboxidivorans P7]
gi|296048506|gb|EFG87939.1| 16S rRNA methyltransferase GidB [Clostridium carboxidivorans P7]
Length = 239
Score = 172 bits (438), Expect = 9e-42, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y D I+ + +T K + + W++KINL + E + +H
Sbjct: 1 MEYFD---IMSQACKDVALPFNEDTYNKFSQYKDMIKVWNEKINLTAIVDDEQIFKKHFI 57
Query: 61 DSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D +++F+ P ID+G+G GFPGI I + + L++S NK+ +FL VV
Sbjct: 58 DCIKIFKFSPLKQAKNVIDIGTGAGFPGIPIKIMKQELN---LILLDSLNKRINFLNEVV 114
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
K + R ++ P+ DV +RA+A+L L E P++
Sbjct: 115 SKINLNNVETIHGRAEDFSRQPKYREQVDVAVSRAVANLAVLSELCIPYVK 165
>gi|238021265|ref|ZP_04601691.1| hypothetical protein GCWU000324_01163 [Kingella oralis ATCC 51147]
gi|237868245|gb|EEP69251.1| hypothetical protein GCWU000324_01163 [Kingella oralis ATCC 51147]
Length = 213
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ L A N+S +KL + L KW+K NL + H+ DSL
Sbjct: 2 TPFSDSLAAGIAQMRLNISPAQQQKLLAYLALLQKWNKTYNLTALRDPAQMVSHHLLDSL 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+GSGGG P I +I ++ + ++++ +KK +FLR +
Sbjct: 62 TLLPYLAQAESMIDVGSGGGMPAIPAAICRPDLQ---ITMVDANSKKTTFLRQAAIELGL 118
Query: 124 RGKVFA-CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E D++++RA A+L + + L
Sbjct: 119 ENVAVNSSRVEELGGQR--ADIVTSRAFAELADFVRLTRHLLND 160
>gi|227873160|ref|ZP_03991451.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
gi|227840991|gb|EEJ51330.1| glucose-inhibited division protein B [Oribacterium sinus F0268]
Length = 248
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-------- 69
+++ + L + +Y + ++ +K +NL + + ED ++H D L + Q++
Sbjct: 17 GLSLTEQQLLQFYQYYQILVEKNKVMNLTAITEEEDVIVKHFVDCLAICQMNVSRETFSE 76
Query: 70 -PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G+G GFPG++ I SI+ ++L +S K+ FL +V+ G F
Sbjct: 77 WIEGKSVMDVGTGAGFPGLVLKIAFPSIQ---LSLSDSLQKRIRFLEELVESLGLEGVKF 133
Query: 129 -ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ + D++ +RA+A+L TL EY P++
Sbjct: 134 YHGRAEDLGHDKNLREQYDLVVSRAVANLATLSEYDLPFVKP 175
>gi|148251784|ref|YP_001236369.1| 16S rRNA methyltransferase GidB [Bradyrhizobium sp. BTAi1]
gi|189039484|sp|A5E8G9|RSMG_BRASB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146403957|gb|ABQ32463.1| Glucose inhibited division protein B [Bradyrhizobium sp. BTAi1]
Length = 222
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L+ + L L+W K NLV+ ST+ W RH+ DSL++ L P IW+DLGS
Sbjct: 26 VSRETEQRLDRYVALLLEWQAKTNLVAPSTLPHLWTRHISDSLQLLDLAPDAKIWVDLGS 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPG++ + L+ G V+L+E KKA+FLR ++ T A G V I + +
Sbjct: 86 GGGFPGVVLACALAERPGAEVHLVERIAKKAAFLREAIRVTGAPGIVHLSEIGDIVEKWS 145
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L L+ ++ P + +
Sbjct: 146 GGVDCVTARALAPLHQLIGFAEPLVKR 172
>gi|269962682|ref|ZP_06177027.1| Glucose inhibited division protein [Vibrio harveyi 1DA3]
gi|269832605|gb|EEZ86719.1| Glucose inhibited division protein [Vibrio harveyi 1DA3]
Length = 211
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A VS + E+L + L KW+K NL S + ++H+ DS+ V
Sbjct: 8 LDALIAQTDLEVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSIVVSTHL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
P +ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 68 P-GERFIDVGTGPGLPGIPLAIMNPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTAI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E Q D + +RA A + ++E+ Q
Sbjct: 124 QSRVEEF-QPEEKFDGVLSRAFASMTDMVEWCHHLPKQ 160
>gi|254672749|emb|CBA06758.1| glucose inhibited division protein B [Neisseria meningitidis
alpha275]
Length = 207
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTGHLLKD 159
>gi|313472996|ref|ZP_07813483.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
gi|313448827|gb|EEQ67802.2| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 1153]
Length = 264
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + ++++ +++ +Y ++ ++ +NL + +E+ +++H DSL F
Sbjct: 3 PELFIKQLAEKGFALNQKQIDQFSKYYKKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPF 62
Query: 67 QLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+P D+G+G GFP I I + ++ +V +S NK+ FL +
Sbjct: 63 LEYPDLFKKGHICDVGAGAGFPSIPIKILVPEMQLAIV---DSLNKRLKFLADLTADLDL 119
Query: 124 R-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A++ TL EY P + +
Sbjct: 120 EQVELIHGRAEDVGQNEKYREKFDLVTARAVANMATLSEYCLPLVKK 166
>gi|283836164|ref|ZP_06355905.1| hypothetical protein CIT292_10590 [Citrobacter youngae ATCC 29220]
gi|291068358|gb|EFE06467.1| 16S rRNA methyltransferase GidB [Citrobacter youngae ATCC 29220]
Length = 207
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKTQLIAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLK-GERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELGLTNITPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|238854396|ref|ZP_04644738.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260665089|ref|ZP_05865939.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
gi|282931800|ref|ZP_06337285.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
gi|238833018|gb|EEQ25313.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 269-3]
gi|260561143|gb|EEX27117.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii SJ-7A-US]
gi|281304107|gb|EFA96224.1| 16S rRNA methyltransferase GidB [Lactobacillus jensenii 208-1]
Length = 239
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + ++++ +++ +Y ++ ++ +NL + +E+ +++H DSL F
Sbjct: 3 PELFIKQLAEKGFALNQKQIDQFSKYYKKLIEVNEYVNLTRITDLEEVYLKHFYDSLTPF 62
Query: 67 QLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+P D+G+G GFP I I + ++ +V +S NK+ FL +
Sbjct: 63 LEYPDLFKKGHICDVGAGAGFPSIPIKILVPEMQLAIV---DSLNKRLKFLADLTADLDL 119
Query: 124 R-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ Q D+++ARA+A++ TL EY P + +
Sbjct: 120 EQVELIHGRAEDVGQNEKYREKFDLVTARAVANMATLSEYCLPLVKK 166
>gi|332983461|ref|YP_004464902.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
gi|332701139|gb|AEE98080.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
Length = 240
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-- 67
L L ++ E +++ + + ++W++ INL S + I+H DSL +
Sbjct: 8 LNNEALKCGISLDDEAIDRFMAYKDMLIEWNEHINLTSITDDMGIVIKHFIDSLLCYSTG 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGK 126
+ + ID+G+G GFPG+ I S++ V L++S KK +FL V++ + +
Sbjct: 68 VIRPDARIIDIGTGAGFPGLALKIAFPSLK---VCLMDSVQKKLNFLDNVIKALSLEDVE 124
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
+ R ++ DV++ARA+A L L EY P+
Sbjct: 125 LIWGRAEDYACKKGYREAFDVVTARAVASLLVLAEYCLPF 164
>gi|329668022|gb|AEB93970.1| glucose inhibited division protein B [Lactobacillus johnsonii DPC
6026]
Length = 239
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ I + ++ + ++ +Y ++++KK+NL + + +++H DS+
Sbjct: 2 NPEIFAKELAKYGFELNEKQQKQFATYYDKLVEFNKKVNLTRITDKNEVYLKHFFDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L D+G+G GFP + I ++ + +++S K+ FL +V
Sbjct: 62 LLEFPDLFKGEKTLCDVGAGAGFPSLPIKILCPNL---SITIVDSLGKRLKFLDELVNDL 118
Query: 122 AA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+ + R ++A Q + D+++ RA+A + L EY P
Sbjct: 119 DLDKVTLVHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|92115736|ref|YP_575465.1| 16S rRNA methyltransferase GidB [Nitrobacter hamburgensis X14]
gi|122418937|sp|Q1QRZ2|RSMG_NITHX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91798630|gb|ABE61005.1| methyltransferase GidB [Nitrobacter hamburgensis X14]
Length = 260
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L+ + L ++W K NL++SST+ W RH+ DSL++ L P W D GS
Sbjct: 53 VSRETEARLDAYVDLLVQWQTKTNLIASSTLPQLWTRHIADSLQLLALAPQAKRWADFGS 112
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMI 139
GGGFPG++ + L+ +EG ++L+E KKA+FLR V+ T G + I + ++
Sbjct: 113 GGGFPGVVLACALADVEGARIDLVERNAKKAAFLREAVRITGTPGVIHPMDIGDYVDRLD 172
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L LL ++ P + Q
Sbjct: 173 GRIDCVTARALAPLQVLLGFAEPLVKQ 199
>gi|323703265|ref|ZP_08114916.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
gi|323531730|gb|EGB21618.1| methyltransferase GidB [Desulfotomaculum nigrificans DSM 574]
Length = 240
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 9/168 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D L + + + + L ++ ++KINL + ++ I+H DSL
Sbjct: 2 VDVTPFLNQGLEEIGLPIETQQISLFNKYLSLIIEGNEKINLTAILEPKEVAIKHFVDSL 61
Query: 64 RVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P + +D+GSG GFPG+ I ++ + L++S NK+ FL+ + K
Sbjct: 62 TCLLAVSFPTGAKVLDIGSGAGFPGVPLKIYRPDLQ---ITLMDSLNKRILFLQDTINKL 118
Query: 122 AARG-KVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWLY 165
R ++ Q DV+ +RA+A L L EY P +
Sbjct: 119 GLNNITAIHSRAEDFGQQPANRENFDVVVSRAVARLVVLSEYCLPCVK 166
>gi|239833101|ref|ZP_04681430.1| methyltransferase GidB [Ochrobactrum intermedium LMG 3301]
gi|239825368|gb|EEQ96936.1| methyltransferase GidB [Ochrobactrum intermedium LMG 3301]
Length = 213
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 70/146 (47%), Positives = 92/146 (63%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ + W RH+ DS ++F L W+D+GS
Sbjct: 17 VSRETADRLIAFEELFRKWSKAINLASPSTLNELWTRHILDSAQLFPLARDVRNWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++LIES KKA+FLR +V + RI+ Q I
Sbjct: 77 GGGFPGIVTACFLAEQPGGAIDLIESAGKKAAFLRTAAGHLNVPARVHSARIETMWQKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T DV++ARALA LD L + PWL +
Sbjct: 137 TPDVVTARALASLDDLFGLTEPWLTR 162
>gi|116630298|ref|YP_815530.1| glucose-inhibited division protein B [Lactobacillus gasseri ATCC
33323]
gi|282852937|ref|ZP_06262278.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
gi|122272765|sp|Q040U0|RSMG_LACGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116095880|gb|ABJ61032.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus gasseri ATCC
33323]
gi|282556045|gb|EFB61666.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 224-1]
Length = 239
Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ I + + +S + E+ +Y ++++KK+NL + + +++H DS+
Sbjct: 2 NPEIFAEELANHGFKLSNKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L D+G+G GFP + I + + +++S K+ FL ++
Sbjct: 62 LLEFSDLFKGEKSLCDVGAGAGFPSLPIKILCPDL---SITIVDSLGKRLKFLDELINDL 118
Query: 122 AA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+ + + R ++A Q + D+++ RA+A + L EY P
Sbjct: 119 SLDKVTLVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCIPL 164
>gi|49474827|ref|YP_032869.1| glucose-inhibited division protein B [Bartonella quintana str.
Toulouse]
gi|55976397|sp|Q6FYC0|RSMG_BARQU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49240331|emb|CAF26813.1| Glucose inhibited division protein b [Bartonella quintana str.
Toulouse]
Length = 215
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 67/147 (45%), Positives = 92/147 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS ET+ L F L L+W+ INL+S++T+ WIRH+ DS +++ LH W DLGS
Sbjct: 19 VSHETMNDLIQFESLILQWNAHINLISAATIPVLWIRHILDSAQIYPLHSNFLHWCDLGS 78
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFP I+ +I L + + G ++L+ES KK +FLR V+ + V CRI++ Q I
Sbjct: 79 GGGFPAIVIAIFLKTKKAGHIDLVESNGKKIAFLRTVISQLNLPATVHHCRIEDVYQKIK 138
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
DVI+AR LA LD LL+ FP L QK
Sbjct: 139 KPDVITARGLACLDELLQLIFPLLTQK 165
>gi|27375743|ref|NP_767272.1| 16S rRNA methyltransferase GidB [Bradyrhizobium japonicum USDA 110]
gi|55976511|sp|Q89WP6|RSMG_BRAJA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27348881|dbj|BAC45897.1| gidB [Bradyrhizobium japonicum USDA 110]
Length = 260
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET +L+ + L +W K NLV+ ST+ W RH+ DSL++ L P W
Sbjct: 60 LKLAPVSRETEARLDRYIALLREWQAKTNLVAPSTLPHLWTRHIADSLQLVDLAPTARRW 119
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG++ + ++ G V+L+E KKA+FLR ++ T + G V I +
Sbjct: 120 ADLGSGGGFPGVVLACTMAETPGASVHLVERIAKKAAFLREAIRITTSPGVVHLAEIGDN 179
Query: 136 PQMI-TTCDVISARALADLDTLLEYSFPWLYQ 166
I D ++ARALA L L+ ++ P + Q
Sbjct: 180 VDRITGPVDCVTARALAPLHQLIGFAEPLMRQ 211
>gi|296105466|ref|YP_003615612.1| 16S rRNA methyltransferase GidB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059925|gb|ADF64663.1| 16S rRNA methyltransferase GidB [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 207
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ +++ +L + + KW+K NL S + IRH+ DS+ V
Sbjct: 4 KLSRLLDQAGISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLIRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
+ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 64 LN-GERFIDVGTGPGLPGIPLSIVRPESH---FTLLDSLGKRVRFLRQVQHELKLENITP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPAE-PPFDGVISRAFASLNDMVSWC 151
>gi|260431966|ref|ZP_05785937.1| 16S rRNA methyltransferase GidB [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415794|gb|EEX09053.1| 16S rRNA methyltransferase GidB [Silicibacter lacuscaerulensis
ITI-1157]
Length = 207
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 70/156 (44%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
A + NVSRETL++L + L KW++KINLVS ST+ + W RH+ DS++VFQ +
Sbjct: 5 ATSTPDNLNVSRETLDRLRLYVDLLEKWNRKINLVSRSTLSEAWSRHILDSIQVFQQVDH 64
Query: 72 PSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
W+DLGSGGGFPG++ + I S L+ES +K++FLR V+++T A V +
Sbjct: 65 FDRWVDLGSGGGFPGLVCAVIATESWPDAQFTLVESDQRKSAFLRTVIRETGANCTVVSK 124
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ DV+SARALADL TLL Y L Q
Sbjct: 125 RIEAVD--RLEADVLSARALADLPTLLSYCERHLRQ 158
>gi|291615572|ref|YP_003518314.1| GidB [Pantoea ananatis LMG 20103]
gi|291150602|gb|ADD75186.1| GidB [Pantoea ananatis LMG 20103]
Length = 208
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++S + ++L + L KW+K NL S + +RH+ DS+ V H
Sbjct: 5 LTSLLQAAKISLSDQQKQQLVAYVGLLDKWNKAYNLTSVRDPQQMLVRHILDSIVVAP-H 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
S +ID+G+G G PGI +I + L++S K+ FLR V + +
Sbjct: 64 LQGSRFIDVGTGPGLPGIPLAIVMPEAH---FTLLDSLGKRVRFLRQVQHELGLTNIEPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ P D + +RA A L+ ++ +
Sbjct: 121 QSRVEAFPSE-PPFDGVISRAFASLEDMVSWCHHL 154
>gi|89092257|ref|ZP_01165211.1| Glucose inhibited division protein [Oceanospirillum sp. MED92]
gi|89083345|gb|EAR62563.1| Glucose inhibited division protein [Oceanospirillum sp. MED92]
Length = 212
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ +S +++L + L +KW+K NL + + RH+ DSL V
Sbjct: 13 LKQGISQLGLALSEHQIDQLIRYLNLLIKWNKAYNLTAVRNPMEMIDRHLIDSLSVVPFI 72
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
ID+GSG G PGI +I + V ++S KK F V + V
Sbjct: 73 -EGKRIIDVGSGPGLPGIPLAICYPELP---VTTLDSNGKKTRFQLQVKGELGLNNLTVV 128
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ D + +RA A L+ ++ ++ +Q+
Sbjct: 129 NERVENC--NFEPFDQVISRAFASLEDMINWTQQLCHQE 165
>gi|261368857|ref|ZP_05981740.1| 16S rRNA methyltransferase GidB [Subdoligranulum variabile DSM
15176]
gi|282569043|gb|EFB74578.1| 16S rRNA methyltransferase GidB [Subdoligranulum variabile DSM
15176]
Length = 234
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S L+ L+ + L + +++K+NL + ++ E RH DSL +D
Sbjct: 15 NIALSPAQLDLLDRYAELLVDYNQKVNLTAITSPEGIEDRHFADSLLFAAQPEVTGKLVD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAP 136
+G+G GFPG++ I ++ + L+E K+ FL+Y+ + G FA R +EA
Sbjct: 75 VGTGAGFPGVVAKIYKPDLQ---LTLMEPTGKRVDFLKYLCGELGLTGIEFAKERAEEAA 131
Query: 137 QM--ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV ARA+A L L EY P + Q
Sbjct: 132 RKIWREQFDVACARAVAALPVLCEYCLPLVRQ 163
>gi|238853720|ref|ZP_04644087.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
gi|238833656|gb|EEQ25926.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri 202-4]
Length = 239
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + A L N + +S + E+ +Y ++++KK+NL + + +++H DS+
Sbjct: 1 MNPEIFAEELANYGFKLSSKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSIT 60
Query: 65 VF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L D+G+G GFP + I + + +++S K+ FL +V
Sbjct: 61 PLLEFSDLFKGEKSLCDVGAGAGFPSLPIKILCPDL---SITIVDSLGKRLKFLDELVSD 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+ + + R ++A Q + D+++ RA+A + L EY P
Sbjct: 118 LSLDKVTLVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|237729051|ref|ZP_04559532.1| glucose-inhibited division protein B [Citrobacter sp. 30_2]
gi|226909673|gb|EEH95591.1| glucose-inhibited division protein B [Citrobacter sp. 30_2]
Length = 207
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLK-GERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + A R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELALTNITPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|300362899|ref|ZP_07059069.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
gi|300352949|gb|EFJ68827.1| 16S rRNA methyltransferase GidB [Lactobacillus gasseri JV-V03]
Length = 239
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 6 SNSILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N + A L N + +S + E+ +Y ++++KK+NL + + +++H DS+
Sbjct: 1 MNPEIFAEELANYGFKLSSKQKEQFATYYNKLIEFNKKVNLTRITDKNEVYLKHFFDSIT 60
Query: 65 VF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L D+G+G GFP + I + + +++S K+ FL +V
Sbjct: 61 PLLEFSDLFKGEKSLCDVGAGAGFPSLPIKILCPDL---SITIVDSLGKRLKFLDELVSD 117
Query: 121 TAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+ + + R ++A Q + D+++ RA+A + L EY P
Sbjct: 118 LSLDKVTLVHSRAEDAGQNKNLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|27364444|ref|NP_759972.1| 16S rRNA methyltransferase GidB [Vibrio vulnificus CMCP6]
gi|37681445|ref|NP_936054.1| glucose-inhibited division protein B [Vibrio vulnificus YJ016]
gi|320154848|ref|YP_004187227.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio vulnificus MO6-24/O]
gi|29336648|sp|Q8DDH8|RSMG_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976474|sp|Q7MGH0|RSMG_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|27360563|gb|AAO09499.1| methyltransferase GidB [Vibrio vulnificus CMCP6]
gi|37200197|dbj|BAC96025.1| glucose inhibited division protein B [Vibrio vulnificus YJ016]
gi|319930160|gb|ADV85024.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio vulnificus MO6-24/O]
Length = 211
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
L A V+ E+L + L KW+K NL S +D ++H+ DS+ V
Sbjct: 5 RQKLDALIEQTDLQVNERQREQLLGYVELLNKWNKAYNLTSVRDPQDMLVKHILDSIVVA 64
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ID+G+G G PGI +I L++S K+ F++ V+ +
Sbjct: 65 PHLD-GERFIDVGTGPGLPGIPLAIMHPE---KTFFLLDSLGKRIRFIKQVLHELKIENV 120
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A + ++E+
Sbjct: 121 TTVQSRVEEF-QPEEKFDGVLSRAFASMTDMVEWCHHL 157
>gi|256848571|ref|ZP_05554012.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
gi|256714623|gb|EEU29603.1| 16S rRNA methyltransferase GidB [Lactobacillus coleohominis
101-4-CHN]
Length = 242
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R ++ + + +Y + ++ +NL + +D +++H DS+
Sbjct: 2 TPEEFRQALANQGIQLTDHQMNQFAQYYQDLVATNQVVNLTRITDEKDVYLKHFYDSITG 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP + I ++ V +++S NK+ +FL+ +V +
Sbjct: 62 SFALPALRTESLSLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRINFLQELVARL 118
Query: 122 AARGKV-FACRIQEAPQ----MITTCDVISARALADLDTLLEYSFP 162
R ++ + DV++ARA+A L L E P
Sbjct: 119 NLDNVTLVHSRAEDFSKKGSAHRENYDVVTARAVARLSVLSELCLP 164
>gi|319780614|ref|YP_004140090.1| methyltransferase GidB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166502|gb|ADV10040.1| methyltransferase GidB [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 210
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 65/159 (40%), Positives = 104/159 (65%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+S+ A+ VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++
Sbjct: 1 MSSMTLASLQDTAGPVSRETFDRLVAFEQMFQKWNRSINLVAQSTSGDVWQRHILDSAQL 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
++ P + W+D+GSGGGFPG++ + L+ +G ++L+ES KKASFL+ V+ + +
Sbjct: 61 ARIEPAATRWVDIGSGGGFPGLVMAFLLAERDGASIDLVESNRKKASFLQTVIGQFSLPA 120
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+V A RI ++ +++T +++ARALA L TLL+ S PWL
Sbjct: 121 RVVARRIDDSHALVSTPQIVTARALAPLSTLLDLSAPWL 159
>gi|271502657|ref|YP_003335683.1| methyltransferase GidB [Dickeya dadantii Ech586]
gi|270346212|gb|ACZ78977.1| methyltransferase GidB [Dickeya dadantii Ech586]
Length = 206
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 8 SILRANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R N L+ ++ + +L + L KW+K NL S E +RH+ DSL V
Sbjct: 1 MLERLNSLMQRAGMALTDQQKNQLLQYVALLHKWNKAYNLTSVREPEQMLVRHIMDSL-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ H + +ID+G+G G PG+ +I L++S K+ FLR V +
Sbjct: 60 VEPHLCGNRFIDVGTGPGLPGVPLAIARPDAH---FVLLDSLGKRVRFLRQVQHELGLSN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R+++ P D + +RA A L ++ +
Sbjct: 117 IEPVQSRVEDFPAE-PPFDGVISRAFASLQDMVNWCHHL 154
>gi|331017734|gb|EGH97790.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 211
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L L ++S E+L + L +KW+K NL + ++ RH+ DSL V
Sbjct: 8 QELSTGALELGIDLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVP 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ WID+GSGGG PGI +I ++L++S KK F V + +
Sbjct: 68 FI-EGTRWIDVGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRFQTQVKLELKLDNLE 123
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
V R + Q D I +RA + L+ ++
Sbjct: 124 VIHSRAE-NYQPDVPFDGIISRAFSSLEDFAGWT 156
>gi|156972767|ref|YP_001443674.1| glucose-inhibited division protein B [Vibrio harveyi ATCC BAA-1116]
gi|166224628|sp|A7N0X5|RSMG_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156524361|gb|ABU69447.1| hypothetical protein VIBHAR_00432 [Vibrio harveyi ATCC BAA-1116]
Length = 211
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R + L+ VS + E+L + L KW+K NL S + ++H+ DS+ V
Sbjct: 7 RLDELIAQTDLEVSEKQREQLVGYVELLDKWNKAYNLTSVRDPLEMLVKHILDSIVVSTH 66
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
P +ID+G+G G PGI +I L++S K+ F++ VV +
Sbjct: 67 LP-GERFIDVGTGPGLPGIPLAIMNPE---KTFFLLDSLGKRIRFIKQVVHTLGLKNVTA 122
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E Q D + +RA A + ++E+ Q
Sbjct: 123 IQSRVEEF-QPEEKFDGVLSRAFASMTDMVEWCHHLPKQ 160
>gi|222525733|ref|YP_002570204.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
gi|222449612|gb|ACM53878.1| methyltransferase GidB [Chloroflexus sp. Y-400-fl]
Length = 442
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+LR +++ L + E + + W+++ NL + RH+ DSL + +
Sbjct: 212 LLRKTTADWGLSLNDHQLAQFERYLDELMTWNERFNLTAVRDRAAMVRRHLLDSLWLARV 271
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
P ID+GSG GFP + I ++ V L+E+ KKA+FLR+V+ +
Sbjct: 272 WETPPDSLIDIGSGAGFPALPLKILYPALP---VTLVEATGKKATFLRHVIDCLQLHNIR 328
Query: 127 VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
V RI+ + P V++ARA+A+L LLEY+ P L
Sbjct: 329 VLNERIETVGQNPTEREHYQVVTARAVAELRVLLEYALPLLR 370
>gi|324111639|gb|EGC05620.1| glucose inhibited division protein [Escherichia fergusonii B253]
gi|325499546|gb|EGC97405.1| 16S rRNA methyltransferase GidB [Escherichia fergusonii ECD227]
Length = 207
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLDNITPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A LD +L +
Sbjct: 129 AE-PPFDGVISRAFASLDDMLNWCHHL 154
>gi|224121638|ref|XP_002318633.1| predicted protein [Populus trichocarpa]
gi|222859306|gb|EEE96853.1| predicted protein [Populus trichocarpa]
Length = 288
Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-----------YPS 73
+++ + L+W++K+NL + + V++ RH+EDSL +
Sbjct: 63 QKKQIRLYVDTLLQWNQKMNLTAVTDVDEVMERHIEDSLAILPPIQDSYVSHCNASIDSI 122
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G G PG++ +I + + V L+ES NK+ FL + + T +V R
Sbjct: 123 KLVDVGTGAGLPGLVLAIACPAWK---VTLLESMNKRCDFLEHAISVTGLSNVEVVRGRA 179
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q DV ARA+A++ L EY P +
Sbjct: 180 ENLGQNVSFREKFDVAVARAVAEMRILAEYCLPLVR 215
>gi|89074718|ref|ZP_01161176.1| glucose-inhibited division protein B [Photobacterium sp. SKA34]
gi|89049482|gb|EAR55043.1| glucose-inhibited division protein B [Photobacterium sp. SKA34]
Length = 206
Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V+ + L++L + L KW+K NL S + ++H+ DS+ V Q +ID
Sbjct: 13 ELQVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSIVVSQYLD-GDSYID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I L++S K+ F+R V+ + R++E
Sbjct: 72 VGTGPGLPGIPLAIMCPD---KSFTLLDSLGKRIRFIRQVIHELKITNVTPVQSRVEEFE 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + ++ +
Sbjct: 129 AGDG-FDAVLSRAFASMADMVNWCHHL 154
>gi|283787571|ref|YP_003367436.1| glucose inhibited division protein [Citrobacter rodentium ICC168]
gi|282951025|emb|CBG90703.1| glucose inhibited division protein [Citrobacter rodentium ICC168]
Length = 207
Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S ++ +RH+ DS+ V H + +ID
Sbjct: 13 GISLTDHQKNQLIAYVDMLHKWNKAYNLTSVRDPDEMLVRHILDSIVVAP-HLHGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + A + R++ P
Sbjct: 72 VGTGPGLPGIPLSIVRPESH---FTLLDSLGKRVRFLRQVQHELALKNITPVQSRVEAFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 AE-PPFDGVISRAFASLNDMVNWCHHL 154
>gi|300719170|ref|YP_003743973.1| methyltransferase, glucose-inhibited division protein B [Erwinia
billingiae Eb661]
gi|299065006|emb|CAX62126.1| Methyltransferase, Glucose-inhibited division protein B [Erwinia
billingiae Eb661]
Length = 206
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S+L+A T ++S + +L + + KW+K NL S E IRH+ DS+ V +
Sbjct: 7 SLLKAA----TISLSDQQKNQLVGYVEMLHKWNKAYNLTSVRDPEQMLIRHIMDSI-VVE 61
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
H S +ID+G+G G PG+ +I L++S K+ FL+ V + +
Sbjct: 62 PHLQGSRFIDVGTGPGLPGVPLAIVRPDAH---FTLLDSLGKRIRFLKQVQHELKLVNIE 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ P D + +RA A L+ +L +
Sbjct: 119 PVQSRVEDFPAE-PPFDGVISRAFASLNDMLNWCHHL 154
>gi|146337361|ref|YP_001202409.1| 16S rRNA methyltransferase GidB [Bradyrhizobium sp. ORS278]
gi|189039485|sp|A4YJT3|RSMG_BRASO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146190167|emb|CAL74159.1| Glucose inhibited division protein B; Methyltransferase gidB
[Bradyrhizobium sp. ORS278]
Length = 222
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET +L+ + L L+W K NLV+ ST+ W RH+ DSL++ L P S W
Sbjct: 21 LALTPVSRETERRLDRYIALLLEWQAKTNLVAPSTLPHLWTRHISDSLQLLDLAPEASFW 80
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
+DLGSGGGFPG++ + L+ G V+L+E KKA+FLR ++ T + G V I +
Sbjct: 81 VDLGSGGGFPGVVLACALAERPGAKVHLVERIAKKAAFLREAIRVTGSPGTVHLSEIGDI 140
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D ++ARALA L L+ ++ P + +
Sbjct: 141 VEKWSGRVDCVTARALAPLHQLVGFAEPLVKK 172
>gi|161870873|ref|YP_001600047.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis 053442]
gi|189045868|sp|A9M3R8|RSMG_NEIM0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161596426|gb|ABX74086.1| glucose inhibited division protein B [Neisseria meningitidis
053442]
Length = 207
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++ ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDILETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPYIEGAQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DVI++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVITSRAFAELADFVSWTGHLLKD 159
>gi|313112544|ref|ZP_07798209.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310625144|gb|EFQ08434.1| 16S rRNA methyltransferase GidB [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 235
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A ++ L++L+ F + + +++K+NL + + E +H DSL
Sbjct: 7 LEAKCSTWNITLTGTQLDQLDAFAEILVDYNQKVNLTAITDPEGIEDKHFLDSLLFASQP 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA
Sbjct: 67 EVAGRMVDVGAGAGFPGIVTKIYKPELE---LTLMEPTGKRVEFLKYACAQLGLTGVEFA 123
Query: 130 -CRIQEAPQM--ITTCDVISARALADLDTLLEYSFPWLY 165
R +EA + D+ SARA+A L L EY P +
Sbjct: 124 KERAEEAARKAWREQFDLASARAVAALPMLAEYCLPLVK 162
>gi|146318067|ref|YP_001197779.1| 16S rRNA methyltransferase GidB [Streptococcus suis 05ZYH33]
gi|146320245|ref|YP_001199956.1| 16S rRNA methyltransferase GidB [Streptococcus suis 98HAH33]
gi|253751261|ref|YP_003024402.1| methyltransferase GidB [Streptococcus suis SC84]
gi|253753162|ref|YP_003026302.1| methyltransferase GidB [Streptococcus suis P1/7]
gi|253754985|ref|YP_003028125.1| methyltransferase GidB [Streptococcus suis BM407]
gi|166224623|sp|A4VZL7|RSMG_STRS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224625|sp|A4VTE0|RSMG_STRSY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145688873|gb|ABP89379.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 05ZYH33]
gi|145691051|gb|ABP91556.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell division [Streptococcus suis 98HAH33]
gi|251815550|emb|CAZ51133.1| methyltransferase GidB [Streptococcus suis SC84]
gi|251817449|emb|CAZ55190.1| methyltransferase GidB [Streptococcus suis BM407]
gi|251819407|emb|CAR44867.1| methyltransferase GidB [Streptococcus suis P1/7]
gi|292557829|gb|ADE30830.1| Glucose inhibited cell division protein [Streptococcus suis GZ1]
gi|319757540|gb|ADV69482.1| 16S rRNA methyltransferase GidB [Streptococcus suis JS14]
Length = 237
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ ++ + + ++ L ++W++KINL + + + +++H DS+
Sbjct: 3 PEVFYKTLADQGIQLTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIAPL 62
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P +D+G+G GFP + I ++ V +I+S NK+ +FL + ++
Sbjct: 63 LQGHIQNEPLRLLDIGAGAGFPSLPMKIIFPQLD---VTIIDSLNKRINFLHLLAEELEL 119
Query: 124 RGKVF-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
G F R ++ Q D+++ARA+A + L E + P+L
Sbjct: 120 EGVHFYHGRAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLK 165
>gi|331104702|ref|ZP_04590132.2| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024530|gb|EGI04586.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 214
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ E+L + L +KW+K NL + ++ RH+ DSL V + W+D
Sbjct: 21 GIELTQSQHEQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFI-EGTRWMD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V+L++S KK F V + +V R +
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VSLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-NY 135
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 136 QPDAPFDGIISRAFSSLEDFAGWT 159
>gi|330447282|ref|ZP_08310932.1| methyltransferase GidB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491473|dbj|GAA05429.1| methyltransferase GidB [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 206
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
V+ + L++L + L KW+K NL S + ++H+ DS+ V + + +ID+
Sbjct: 14 LQVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSIVVSKYL-GGTNYIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G G PGI +I L++S K+ F+R V+ + R++E
Sbjct: 73 GTGPGLPGIPLAIMCPD---KSFTLLDSLGKRIRFIRQVIHELKITNVTPVQSRVEEFEA 129
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + ++ +
Sbjct: 130 EDG-FDAVLSRAFASMADMVNWCHHL 154
>gi|299143473|ref|ZP_07036553.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517958|gb|EFI41697.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 232
Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPS 73
+ + + + LEKLE + L L W+ K+NL + + ++ I+H DSL +F+
Sbjct: 7 IEEFGLKTDCLEKLEQYRELLLSWNDKMNLTAITEEDEVNIKHFLDSLSLFKTNYFDGSK 66
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
ID+G+G GFPGI+ I + + L +S NK+ FL V+++ + R
Sbjct: 67 SVIDIGTGAGFPGIVLKIYNEDLN---ITLFDSLNKRLLFLNDVIERLKLKDIYTLHGRA 123
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+E + D+ +RA+A+L TLLEY P++
Sbjct: 124 EEFGRKDTHRECYDIAVSRAVANLTTLLEYDLPFVK 159
>gi|90413744|ref|ZP_01221732.1| glucose-inhibited division protein B [Photobacterium profundum
3TCK]
gi|90325213|gb|EAS41710.1| glucose-inhibited division protein B [Photobacterium profundum
3TCK]
Length = 206
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V+ + +++L + L KW+K NL S + ++H+ DS+ V H +ID
Sbjct: 13 ELQVTEQQVQQLVGYVELLHKWNKAYNLTSVRDPHEMLVKHIMDSI-VVSAHLQGENFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I L++S K+ F++ VV + R++E
Sbjct: 72 VGTGPGLPGIPLAIMCPEKN---FTLLDSLGKRIRFIKQVVHELNIANVTPVQSRVEEF- 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
Q D + +RA A ++ ++ +
Sbjct: 128 QPEQGFDGVISRAFASMNDMVSWCHHL 154
>gi|90581141|ref|ZP_01236940.1| glucose-inhibited division protein B [Vibrio angustum S14]
gi|90437662|gb|EAS62854.1| glucose-inhibited division protein B [Vibrio angustum S14]
Length = 206
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V+ + L++L + L KW+K NL S + ++H+ DS+ V + + +ID
Sbjct: 13 ELQVTEQQLDQLIGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-VVSHYLDGATYID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I L++S K+ F+R V+ + R++E
Sbjct: 72 VGTGPGLPGIPLAIMCPD---KSFTLLDSLGKRIRFIRQVIHELKITNVTPVQSRVEEFE 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + ++ +
Sbjct: 129 AGDG-FDAVLSRAFASMADMVNWCHHL 154
>gi|54310652|ref|YP_131672.1| 16S rRNA methyltransferase GidB [Photobacterium profundum SS9]
gi|55976423|sp|Q6LLF8|RSMG_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46915095|emb|CAG21870.1| Putative glucose inhibited division protein B [Photobacterium
profundum SS9]
Length = 206
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V+ + +++L + L KW+K NL S + ++H+ DS+ V H +ID
Sbjct: 13 ELQVTEQQVQQLVGYVELLHKWNKAYNLTSVRDPNEMLVKHIMDSI-VVSAHLQGENFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I L++S K+ F++ VV + R++E
Sbjct: 72 VGTGPGLPGIPLAIMCPEKN---FTLLDSLGKRIRFIKQVVHELKIANVTPVQSRVEEF- 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
Q D + +RA A ++ ++ +
Sbjct: 128 QPEQGFDGVISRAFASMNDMVSWCHHL 154
>gi|307133312|ref|YP_003885328.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Dickeya
dadantii 3937]
gi|306530841|gb|ADN00772.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Dickeya
dadantii 3937]
Length = 206
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L + +S ++L + L KW+K NL S E +RH+ DSL V +
Sbjct: 3 DTLNSLLQRAGIALSDRQKDQLLQYVALLHKWNKAYNLTSVREPEQMLVRHIMDSL-VVE 61
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
H S +ID+G+G G PG+ +I L++S K+ FLR V + +
Sbjct: 62 PHLAGSRFIDVGTGPGLPGVPLAIARPDAH---FVLLDSLGKRVRFLRQVQHELNLGNIE 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R+++ P D + +RA A L ++ + +++
Sbjct: 119 PVQSRVEDFPAE-PPFDGVISRAFASLQDMVNWCHHLPSRQQ 159
>gi|330961497|gb|EGH61757.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 214
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S+ ++L + L +KW+K NL + ++ RH+ DSL V + W+D
Sbjct: 21 GIDLSQAQHDQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWMD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I V+L++S KK F V + +V R +
Sbjct: 80 VGSGGGMPGIPMAILFPERH---VSLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-NY 135
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 136 QPDAPFDGIISRAFSSLEDFAGWT 159
>gi|304388996|ref|ZP_07371043.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis ATCC 13091]
gi|304337130|gb|EFM03317.1| 16S rRNA methyltransferase GidB [Neisseria meningitidis ATCC 13091]
Length = 207
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ LRA ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRLDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DV+++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVVTSRAFAELADFVSWTVHLLKD 159
>gi|212697396|ref|ZP_03305524.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325846390|ref|ZP_08169359.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
gi|212675588|gb|EEB35195.1| hypothetical protein ANHYDRO_01966 [Anaerococcus hydrogenalis DSM
7454]
gi|325481574|gb|EGC84614.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
hydrogenalis ACS-025-V-Sch4]
Length = 209
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 6/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K E + + ++ +KK NL + + I+H EDSL + +D+GSG GFP
Sbjct: 1 MDKFEKYGQMLIETNKKFNLTTIDEPDQIKIKHFEDSLTIKSYINEGMKVLDIGSGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCD 143
GI I+ + + LI+S NKK +F+ V+++ + + R ++ A + D
Sbjct: 61 GIPLRIE----KDFDLTLIDSVNKKVNFMNQVIEELDLKNTRAIHVRAEDFAKEHREEFD 116
Query: 144 VISARALADLDTLLEYSFPWLY 165
++ +RA+A+L TL EY+ P+L
Sbjct: 117 MVISRAVANLSTLSEYALPFLK 138
>gi|300940926|ref|ZP_07155452.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 21-1]
gi|300454356|gb|EFK17849.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 21-1]
Length = 207
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|227889290|ref|ZP_04007095.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
gi|227850092|gb|EEJ60178.1| glucose-inhibited division protein B [Lactobacillus johnsonii ATCC
33200]
Length = 239
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ I + ++ + ++ +Y ++++KK+NL + +++H DS+
Sbjct: 2 NPEIFAKELAKYGFELNEKQTKQFATYYDKLIEFNKKVNLTRIIDKNEVYLKHFFDSITP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L D+G+G GFP + I ++ + +++S K+ FL +V
Sbjct: 62 LLEFPDLFKGEKTLCDVGAGAGFPSLPIKILCPNL---SITIVDSLGKRLKFLDELVNDL 118
Query: 122 AA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPW 163
+ + R ++A Q + D+++ RA+A + L EY P
Sbjct: 119 GLDKVTLVHSRAEDAGQNKDLREKFDLVTGRAVARMSVLSEYCLPL 164
>gi|257437747|ref|ZP_05613502.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
gi|257199762|gb|EEU98046.1| 16S rRNA methyltransferase GidB [Faecalibacterium prausnitzii
A2-165]
Length = 235
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ E L++L+ F + + +++K+NL + + E +H DSL
Sbjct: 7 LEQKCSMWNIALTGEQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSLLFASQP 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA
Sbjct: 67 EVAGKMVDVGAGAGFPGIVTKIYKPELE---LTLMEPTGKRVEFLKYACAQLGLTGVEFA 123
Query: 130 -CRIQEAPQM--ITTCDVISARALADLDTLLEYSFPWLY 165
R +EA + D+ SARA+A L L EY P +
Sbjct: 124 KERAEEAARKAWREQFDLASARAVAALPMLAEYCLPLVK 162
>gi|322807965|emb|CBZ05540.1| 16s rRNAmethyltransferase GidA [Clostridium botulinum H04402 065]
Length = 239
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL++ + + + +L + L +W+KKINL + ++ +H D +++F+
Sbjct: 6 ILQSACNDVNLDFNDKKYNQLISYKNLIQEWNKKINLTAIVEDDEIIKKHFIDCIKIFKS 65
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ID+G+G GFPGI I IE + L++S K+ +FL V+ + +
Sbjct: 66 SPIGEAKSLIDIGTGAGFPGIPIKILKEDIE---ITLLDSLQKRINFLNIVIGELQLKNI 122
Query: 126 KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q + +RA+A+L L E+ P++ +
Sbjct: 123 QCLHGRAEDYAQEIQHRQKYGIAVSRAVANLAVLSEFCIPFVEK 166
>gi|240256423|ref|NP_568720.4| unknown protein [Arabidopsis thaliana]
gi|332008514|gb|AED95897.1| glucose inhibited division protein B [Arabidopsis thaliana]
Length = 292
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---------- 70
+S +++ + L+W++K+NL ++ ++ RH+EDSL +
Sbjct: 63 LSSSQQDQIHLYVDTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDL 122
Query: 71 -YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
ID+GSG G PG++ +I V L+ES NK+ FL +VV T +
Sbjct: 123 FDHINLIDVGSGAGLPGLVLAIACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIV 179
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R + DV ARA+A++ L EY P +
Sbjct: 180 RGRAESCGHDVMYREKFDVAIARAVAEMRVLAEYCLPLVR 219
>gi|218707386|ref|YP_002414905.1| 16S rRNA methyltransferase GidB [Escherichia coli UMN026]
gi|293407377|ref|ZP_06651299.1| ribosomal RNA small subunit methyltransferase G [Escherichia coli
FVEC1412]
gi|293413190|ref|ZP_06655856.1| 16S rRNA methyltransferase GidB [Escherichia coli B354]
gi|298383119|ref|ZP_06992714.1| glucose inhibited division protein B [Escherichia coli FVEC1302]
gi|300896069|ref|ZP_07114628.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 198-1]
gi|226725357|sp|B7NF56|RSMG_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218434483|emb|CAR15410.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli UMN026]
gi|284923854|emb|CBG36953.1| glucose inhibited division protein [Escherichia coli 042]
gi|291425668|gb|EFE98704.1| ribosomal RNA small subunit methyltransferase G [Escherichia coli
FVEC1412]
gi|291468323|gb|EFF10818.1| 16S rRNA methyltransferase GidB [Escherichia coli B354]
gi|298276955|gb|EFI18473.1| glucose inhibited division protein B [Escherichia coli FVEC1302]
gi|300360055|gb|EFJ75925.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 198-1]
Length = 207
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|312868952|ref|ZP_07729132.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
gi|311095516|gb|EFQ53780.1| 16S rRNA methyltransferase GidB [Lactobacillus oris PB013-T2-3]
Length = 240
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + N++ +++ +Y L + ++++NL + D +++H DSL
Sbjct: 2 NPEQFQQALADRGINLTDRQMQQFADYYQLLVTTNRQVNLTRITEENDVYLKHFYDSLTG 61
Query: 66 FQLHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P D+G+G GFP + I ++ V +++S NK+ +FL+ +V K
Sbjct: 62 AFAEPRLQTEQLPLCDIGAGAGFPSLPLKIAFPQLQ---VTIVDSLNKRINFLQELVAKL 118
Query: 122 AARGKV-FACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
G R + + D++ ARA+A L L E P
Sbjct: 119 GLSGVTLVHDRAETFSAKKAANREKYDLVLARAVARLSVLAELCLP 164
>gi|239993738|ref|ZP_04714262.1| glucose-inhibited division protein B [Alteromonas macleodii ATCC
27126]
Length = 211
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ ++IL + + ++S + ++L + L KW+K NL S + ++H+ DSL
Sbjct: 6 ELHTILVSGLDALSLDLSDKQQQQLVDYVLLMDKWNKAYNLTSVRDPKQMMVKHILDSLA 65
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + ID+G+G G PG+ +I L++S K+ F+ V
Sbjct: 66 IVPFLDGNN-IIDVGTGPGLPGMPLAIAFPD---KSFTLLDSLGKRVRFMTQCVHTLGLT 121
Query: 125 GKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R++E T D++ +RA A L +L + +
Sbjct: 122 NVTPVQSRVEE-HNGDTPYDIVLSRAFASLKDMLHWCQHLV 161
>gi|206578596|ref|YP_002241279.1| methyltransferase GidB [Klebsiella pneumoniae 342]
gi|288937918|ref|YP_003441977.1| methyltransferase GidB [Klebsiella variicola At-22]
gi|290511658|ref|ZP_06551026.1| 16S rRNA methyltransferase GidB [Klebsiella sp. 1_1_55]
gi|226797826|sp|B5XZL6|RSMG_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|206567654|gb|ACI09430.1| methyltransferase GidB [Klebsiella pneumoniae 342]
gi|288892627|gb|ADC60945.1| methyltransferase GidB [Klebsiella variicola At-22]
gi|289775448|gb|EFD83448.1| 16S rRNA methyltransferase GidB [Klebsiella sp. 1_1_55]
Length = 207
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ +++ +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 L-QGSRFIDVGTGPGLPGIPLAIVRPESH---FTLLDSLGKRVRFLRQVQHELKLDNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEAFPAE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|301020856|ref|ZP_07184917.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 69-1]
gi|331675224|ref|ZP_08375977.1| 16S rRNA methyltransferase GidB [Escherichia coli TA280]
gi|331685467|ref|ZP_08386053.1| 16S rRNA methyltransferase GidB [Escherichia coli H299]
gi|300398426|gb|EFJ81964.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 69-1]
gi|331067669|gb|EGI39071.1| 16S rRNA methyltransferase GidB [Escherichia coli TA280]
gi|331077838|gb|EGI49050.1| 16S rRNA methyltransferase GidB [Escherichia coli H299]
Length = 207
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|75674295|ref|YP_316716.1| glucose inhibited division protein [Nitrobacter winogradskyi
Nb-255]
gi|123614359|sp|Q3SWH7|RSMG_NITWN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|74419165|gb|ABA03364.1| Glucose inhibited division protein [Nitrobacter winogradskyi
Nb-255]
Length = 277
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 2/166 (1%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
KY ++ +A L T VS ET +L+ + L ++W K NLV+SST+ W RH+ D
Sbjct: 52 KYSPCSATDKAAALALT-PVSSETEARLDAYVDLLVQWQTKTNLVASSTLPQLWTRHIAD 110
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL++ L P W DLGSGGGFPG++ + L+ IEG V+L+E KKA+FLR V+ T
Sbjct: 111 SLQLLALAPQAKCWADLGSGGGFPGVVLACALADIEGARVDLVERNAKKAAFLREAVRIT 170
Query: 122 AARGKVFACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQ 166
A+ V I + D ++ARALA L LL + P + +
Sbjct: 171 ASPASVHLMDIGDYVDRSEDRIDCVTARALAPLQVLLGFVEPLVNK 216
>gi|311281695|ref|YP_003943926.1| methyltransferase GidB [Enterobacter cloacae SCF1]
gi|308750890|gb|ADO50642.1| methyltransferase GidB [Enterobacter cloacae SCF1]
Length = 207
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + IRH+ DS+ V H +ID
Sbjct: 13 GISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLIRHILDSIVVAP-HLQGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI S+ L++S K+ FLR V + R+++ P
Sbjct: 72 VGTGPGLPGIPLSVVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENVTPVQSRVEDFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 AQ-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|284007081|emb|CBA72356.1| methyltransferase (glucose-inhibited division protein B)
[Arsenophonus nasoniae]
Length = 208
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 15 LLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
LL+ + ++ + +++L + L KW+K NL S + E IRH+ DS+ + +
Sbjct: 10 LLDKTDIILTDQQIQQLIAYIELLNKWNKAYNLTSIRSPEQMIIRHILDSI-IVDKYLVG 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ID+G+G G PGI +I + L++S K+ FLR + + + +
Sbjct: 69 KRFIDVGTGPGLPGIPLAIVRPNAH---FTLLDSLGKRVRFLRQIQHELMLKNIEPIQKR 125
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E Q + D I +RA A + +L + Q
Sbjct: 126 VEQYQPVEKFDGIVSRAFASIQDMLSWCQHLPKQ 159
>gi|331665394|ref|ZP_08366295.1| 16S rRNA methyltransferase GidB [Escherichia coli TA143]
gi|331057904|gb|EGI29890.1| 16S rRNA methyltransferase GidB [Escherichia coli TA143]
Length = 207
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|34496117|ref|NP_900332.1| 16S rRNA methyltransferase GidB [Chromobacterium violaceum ATCC
12472]
gi|55976481|sp|Q7P0A5|RSMG_CHRVO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34101971|gb|AAQ58338.1| glucose inhibited division protein B [Chromobacterium violaceum
ATCC 12472]
Length = 209
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ L+ ++ +E L+ + L +KW++ NL + E H+ DSL +
Sbjct: 6 AELKQGLAQLALELTEPQVELLQRYLALLVKWNQTYNLTAIRQEERMVSYHLLDSLSLVP 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +D+GSGGG PGI T+I ++ V L++S +KK +FLR VV +
Sbjct: 66 HLAGGTRMLDVGSGGGMPGIPTAIARPDLQ---VALLDSNHKKTTFLRQVVLELGLPNVQ 122
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA Q D I++RA ++L ++ + +
Sbjct: 123 VVTDRVEAYQPEQKFDRITSRAFSELSEFVKLTRHLMAD 161
>gi|332800540|ref|YP_004462039.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
sp. Re1]
gi|332698275|gb|AEE92732.1| Ribosomal RNA small subunit methyltransferase G [Tepidanaerobacter
sp. Re1]
Length = 238
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D IL + +S E + +L+ F L L+ +K +NL S + EDF +HV DSL
Sbjct: 3 DFKEILTREAKGHDIELSDEQILQLDVFRSLLLERNKMVNLTSITEPEDFAKKHVIDSLM 62
Query: 65 VFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + + + +D+G+G G PG+I I IE ++L+ES KK FLR V+ K
Sbjct: 63 IVKHIEIDHEAKIMDVGTGPGIPGLILKIYRPDIE---LSLLESVRKKTDFLRDVIGKMN 119
Query: 123 A-RGKVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+V R +E + + D++ ARA++ L+ LLE P++
Sbjct: 120 ISDVQVINGRAEEVGHDIKHRESYDIVVARAVSSLNVLLELCLPFVR 166
>gi|223932622|ref|ZP_03624622.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|330832234|ref|YP_004401059.1| methyltransferase GidB [Streptococcus suis ST3]
gi|223898732|gb|EEF65093.1| methyltransferase GidB [Streptococcus suis 89/1591]
gi|329306457|gb|AEB80873.1| methyltransferase GidB [Streptococcus suis ST3]
Length = 237
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ ++ + + ++ L ++W++KINL + + + +++H DS+
Sbjct: 3 PEVFYKTLADQGIQLTDQQKHQFHRYFQLLVEWNEKINLTAITEESEVYLKHFYDSIAPI 62
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P +D+G+G GFP + I ++ V +I+S NK+ +FL + ++
Sbjct: 63 LQGHIQNEPLRLLDIGAGAGFPSLPMKIIFPQLD---VTIIDSLNKRINFLHLLAEELEL 119
Query: 124 RGKVF-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
G F R ++ Q D+++ARA+A + L E + P+L
Sbjct: 120 EGVHFYHGRAEDFAQDKNFRAQFDLVTARAVARMQILSELTIPYLK 165
>gi|324012754|gb|EGB81973.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 60-1]
Length = 216
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 13 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 72
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 73 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 128
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 129 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 163
>gi|323975192|gb|EGB70296.1| glucose inhibited division protein [Escherichia coli TW10509]
Length = 207
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|300925570|ref|ZP_07141443.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 182-1]
gi|301324959|ref|ZP_07218514.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 78-1]
gi|300418344|gb|EFK01655.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 182-1]
gi|300848130|gb|EFK75890.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 78-1]
Length = 215
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 12 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 71
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 72 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 127
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 128 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 162
>gi|73663751|ref|YP_302532.1| 16S rRNA methyltransferase GidB [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123641435|sp|Q49UI6|RSMG_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|72496266|dbj|BAE19587.1| glucose inhibited division protein B [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 239
Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S + ++ + +Y + ++W++K+NL S + + +++H DS+
Sbjct: 6 LTQQLSTHGIELSDKQQQQFQTYYQMLVEWNEKMNLTSITEEHEVYLKHFYDSIATSFYT 65
Query: 70 PYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
D+G+G GFP I I +++ V +++S NK+ FL + +
Sbjct: 66 DLTKELTICDVGAGAGFPSIPLKIIFPNLK---VTIVDSLNKRIHFLNQLAEALELDNVS 122
Query: 128 F-ACRIQEAP--QMITTCDVISARALADLDTLLEYSFPWLYQ 166
F R + + D+++ARA+A L L E P + +
Sbjct: 123 FVHDRAETYGKGDYRASYDIVTARAVARLSVLSELCLPLVKK 164
>gi|261250649|ref|ZP_05943224.1| ribosomal RNA small subunit methyltransferase G [Vibrio orientalis
CIP 102891]
gi|260939218|gb|EEX95205.1| ribosomal RNA small subunit methyltransferase G [Vibrio orientalis
CIP 102891]
Length = 210
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S L A VS E+L + + KW+K NL S ++ ++H+ DS+ +
Sbjct: 5 RSQLDALIAQTDLEVSSHQREQLVGYVEMLNKWNKAYNLTSVRDPQEMLVKHIMDSI-IV 63
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H +ID+G+G G PGI +I + + L++S K+ F++ V+ +
Sbjct: 64 STHLQGERFIDVGTGPGLPGIPLAIMNPTKQ---FCLLDSLGKRIRFIKQVLHELKIDNV 120
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A + ++E+
Sbjct: 121 NPIQSRVEE-YQPEDKFDGVLSRAFASITDMVEWCHHL 157
>gi|329298810|ref|ZP_08256146.1| 16S rRNA methyltransferase GidB [Plautia stali symbiont]
Length = 205
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 11 RANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL N +S + ++L + L KW+K NL S + +RH+ DS+ V +
Sbjct: 4 KLSRLLQAANISLSDQQKQQLVGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVES 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 63 HLQGERFIDVGTGPGLPGIPLAIVRPQAH---FTLLDSLGKRVRFLRQVQHELGLTNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
++E P D + +RA A L+ +L +
Sbjct: 120 VQSPVEEFPAE-PPFDGVISRAFASLEDMLNWCHHL 154
>gi|322386902|ref|ZP_08060526.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
gi|321269184|gb|EFX52120.1| glucose inhibited division protein B [Streptococcus cristatus ATCC
51100]
Length = 246
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 22 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 81
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 82 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRA 138
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 139 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 174
>gi|170766772|ref|ZP_02901225.1| methyltransferase GidB [Escherichia albertii TW07627]
gi|170124210|gb|EDS93141.1| methyltransferase GidB [Escherichia albertii TW07627]
Length = 207
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIAPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|170682169|ref|YP_001746070.1| 16S rRNA methyltransferase GidB [Escherichia coli SMS-3-5]
gi|218702590|ref|YP_002410219.1| 16S rRNA methyltransferase GidB [Escherichia coli IAI39]
gi|226725355|sp|B7NR42|RSMG_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725358|sp|B1LL67|RSMG_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170519887|gb|ACB18065.1| methyltransferase GidB [Escherichia coli SMS-3-5]
gi|218372576|emb|CAR20450.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli IAI39]
Length = 207
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 64 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|24115043|ref|NP_709553.1| 16S rRNA methyltransferase GidB [Shigella flexneri 2a str. 301]
gi|32699527|sp|Q83PJ7|RSMG_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24054303|gb|AAN45260.1| glucose-inhibited division protein GidB [Shigella flexneri 2a str.
301]
Length = 207
Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+GSG G PGI SI L++S K+ FLR V + +
Sbjct: 64 L-QGERFIDVGSGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|323965808|gb|EGB61259.1| glucose inhibited division protein [Escherichia coli M863]
gi|327250892|gb|EGE62594.1| methyltransferase GidB [Escherichia coli STEC_7v]
Length = 207
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + + R++E P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|300983836|ref|ZP_07176778.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 200-1]
gi|300306865|gb|EFJ61385.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 200-1]
Length = 217
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 14 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 73
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 74 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 129
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 130 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 164
>gi|90409268|ref|ZP_01217370.1| GidB [Psychromonas sp. CNPT3]
gi|90309628|gb|EAS37811.1| GidB [Psychromonas sp. CNPT3]
Length = 211
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR+ L T VS + + +L L +KW+K NL S + I+H+ DS+ V H
Sbjct: 11 LRSMISLTTLKVSDKQINQLIQLLELLVKWNKAYNLTSVRDPQQMLIKHIMDSI-VVSPH 69
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
ID+G+G G PG+ +I + L++S K+ F+R V + + F
Sbjct: 70 LQGQRLIDVGTGPGLPGLPLAILNPDKQ---FVLLDSLGKRLRFIRQAVLELGLKNVEFI 126
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYS 160
E DV+ +RA A L +L +
Sbjct: 127 QSRVEEYHPEEKFDVVLSRAFASLADMLNWC 157
>gi|251791739|ref|YP_003006460.1| methyltransferase GidB [Dickeya zeae Ech1591]
gi|247540360|gb|ACT08981.1| methyltransferase GidB [Dickeya zeae Ech1591]
Length = 206
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL + ++ + +L + L KW+K NL S E +RH+ DSL V +
Sbjct: 3 EILNSLLQRAGMTLTDQQKNQLIQYVALLHKWNKAYNLTSVREPEQMLVRHIMDSL-VVE 61
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
H + +ID+G+G G PG+ +I L++S K+ FLR V + +
Sbjct: 62 PHLVGNRFIDVGTGPGLPGVPLAIVRPDAH---FVLLDSLGKRVRFLRQVQHELNLGNIE 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ P D + +RA A L ++ +
Sbjct: 119 PVQSRVEDFPS-DPPFDGVISRAFASLQDMVNWCHHL 154
>gi|152998467|ref|YP_001343302.1| methyltransferase GidB [Marinomonas sp. MWYL1]
gi|189045858|sp|A6W3T8|RSMG_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150839391|gb|ABR73367.1| methyltransferase GidB [Marinomonas sp. MWYL1]
Length = 208
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 4/159 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++ +S ET++ L + + KW+K NL + VE H+ DSL
Sbjct: 5 DTIQKGAQQMGAALSDETIQTLVKYLAMLEKWNKAYNLTAIRDVEQMISLHLLDSLATLP 64
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ ID+G+G G PG++ +I L++S KK FL V +
Sbjct: 65 YITGDN-IIDVGTGPGLPGMVLAICYPEKR---FTLLDSNGKKTRFLTQVKMELGIHNAT 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A E D + +RA A L ++ ++ P +
Sbjct: 121 VANERVEKHSHQGEYDHVISRAFASLQDMINWTLPLPKE 159
>gi|10177222|dbj|BAB10297.1| unnamed protein product [Arabidopsis thaliana]
Length = 329
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---------- 70
+S +++ + L+W++K+NL ++ ++ RH+EDSL +
Sbjct: 63 LSSSQQDQIHLYVDTLLQWNQKMNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDL 122
Query: 71 -YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
ID+GSG G PG++ +I V L+ES NK+ FL +VV T +
Sbjct: 123 FDHINLIDVGSGAGLPGLVLAIACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIV 179
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R + DV ARA+A++ L EY P +
Sbjct: 180 RGRAESCGHDVMYREKFDVAIARAVAEMRVLAEYCLPLVR 219
>gi|90421813|ref|YP_530183.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisB18]
gi|122477631|sp|Q21CM2|RSMG_RHOPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|90103827|gb|ABD85864.1| methyltransferase GidB [Rhodopseudomonas palustris BisB18]
Length = 234
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
Query: 4 CDSNSILRAN--YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
L A+ L VSRET +L+ + L L+W K NL+S +T+ W RHV D
Sbjct: 8 SPPPPELAADKAAALRLTPVSRETEARLDAYVALLLQWQAKTNLISPATLPQLWTRHVAD 67
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL++ +L P W+D GSGGGFPG++ + L+ GG V L+E KKA+FLR ++ T
Sbjct: 68 SLQLLRLAPDAKTWLDFGSGGGFPGVVLACALAESAGGSVQLVERNVKKAAFLREALRVT 127
Query: 122 AARGKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G+V I + + D ++ARA+A L L+ ++ P + Q
Sbjct: 128 GGAGQVILADIGDSVDRFAGQVDCVTARAVAPLHQLIGFAKPLIRQ 173
>gi|320174631|gb|EFW49767.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella dysenteriae CDC 74-1112]
Length = 207
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 64 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|330870068|gb|EGH04777.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 214
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L KW+K NL + ++ RH+ DSL V + WID
Sbjct: 21 GIDLSPAQHEQLLAYLALLTKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R +
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-NY 135
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 136 QPDAPFDGIISRAFSSLEDFTGWT 159
>gi|15804340|ref|NP_290379.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 EDL933]
gi|15833936|ref|NP_312709.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
Sakai]
gi|16131608|ref|NP_418196.1| 16S rRNA m(7)G527 methyltransferase, SAM-dependent;
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. MG1655]
gi|26250486|ref|NP_756526.1| 16S rRNA methyltransferase GidB [Escherichia coli CFT073]
gi|30064955|ref|NP_839126.1| 16S rRNA methyltransferase GidB [Shigella flexneri 2a str. 2457T]
gi|74314234|ref|YP_312653.1| 16S rRNA methyltransferase GidB [Shigella sonnei Ss046]
gi|82546100|ref|YP_410047.1| 16S rRNA methyltransferase GidB [Shigella boydii Sb227]
gi|89110267|ref|AP_004047.1| methyltransferase, glucose-inhibited cell-division protein
[Escherichia coli str. K-12 substr. W3110]
gi|91213267|ref|YP_543253.1| 16S rRNA methyltransferase GidB [Escherichia coli UTI89]
gi|110644081|ref|YP_671811.1| 16S rRNA methyltransferase GidB [Escherichia coli 536]
gi|110807564|ref|YP_691084.1| 16S rRNA methyltransferase GidB [Shigella flexneri 5 str. 8401]
gi|117626011|ref|YP_859334.1| glucose-inhibited division protein B [Escherichia coli APEC O1]
gi|157163222|ref|YP_001460540.1| 16S rRNA methyltransferase GidB [Escherichia coli HS]
gi|168748530|ref|ZP_02773552.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4113]
gi|168753642|ref|ZP_02778649.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4401]
gi|168766240|ref|ZP_02791247.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4486]
gi|168772211|ref|ZP_02797218.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4196]
gi|168779975|ref|ZP_02804982.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4076]
gi|168786583|ref|ZP_02811590.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC869]
gi|170022223|ref|YP_001727177.1| 16S rRNA methyltransferase GidB [Escherichia coli ATCC 8739]
gi|170083241|ref|YP_001732561.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187732172|ref|YP_001882423.1| 16S rRNA methyltransferase GidB [Shigella boydii CDC 3083-94]
gi|188493070|ref|ZP_03000340.1| methyltransferase GidB [Escherichia coli 53638]
gi|191169754|ref|ZP_03031413.1| 16S rRNA methyltransferase GidB [Escherichia coli B7A]
gi|191170432|ref|ZP_03031985.1| 16S rRNA methyltransferase GidB [Escherichia coli F11]
gi|193063828|ref|ZP_03044915.1| 16S rRNA methyltransferase GidB [Escherichia coli E22]
gi|193071606|ref|ZP_03052512.1| 16S rRNA methyltransferase GidB [Escherichia coli E110019]
gi|194428104|ref|ZP_03060648.1| 16S rRNA methyltransferase GidB [Escherichia coli B171]
gi|194435612|ref|ZP_03067715.1| 16S rRNA methyltransferase GidB [Escherichia coli 101-1]
gi|195936367|ref|ZP_03081749.1| glucose-inhibited division protein B [Escherichia coli O157:H7 str.
EC4024]
gi|208808840|ref|ZP_03251177.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4206]
gi|208812418|ref|ZP_03253747.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4045]
gi|208818673|ref|ZP_03258993.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4042]
gi|209399374|ref|YP_002273268.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4115]
gi|209921221|ref|YP_002295305.1| 16S rRNA methyltransferase GidB [Escherichia coli SE11]
gi|215489078|ref|YP_002331509.1| 16S rRNA methyltransferase GidB [Escherichia coli O127:H6 str.
E2348/69]
gi|217324250|ref|ZP_03440334.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14588]
gi|218556311|ref|YP_002389225.1| 16S rRNA methyltransferase GidB [Escherichia coli IAI1]
gi|218560815|ref|YP_002393728.1| 16S rRNA methyltransferase GidB [Escherichia coli S88]
gi|218692028|ref|YP_002400240.1| 16S rRNA methyltransferase GidB [Escherichia coli ED1a]
gi|218697466|ref|YP_002405133.1| 16S rRNA methyltransferase GidB [Escherichia coli 55989]
gi|227883962|ref|ZP_04001767.1| glucose-inhibited division protein B [Escherichia coli 83972]
gi|237703541|ref|ZP_04534022.1| ribosomal RNA small subunit methyltransferase G [Escherichia sp.
3_2_53FAA]
gi|238902831|ref|YP_002928627.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli BW2952]
gi|253775625|ref|YP_003038456.1| 16S rRNA methyltransferase GidB [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038959|ref|ZP_04873011.1| methyltransferase gidB [Escherichia sp. 1_1_43]
gi|254795746|ref|YP_003080583.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14359]
gi|256021238|ref|ZP_05435103.1| 16S rRNA methyltransferase GidB [Shigella sp. D9]
gi|256025529|ref|ZP_05439394.1| 16S rRNA methyltransferase GidB [Escherichia sp. 4_1_40B]
gi|260846475|ref|YP_003224253.1| methyltransferase GidB [Escherichia coli O103:H2 str. 12009]
gi|260857845|ref|YP_003231736.1| methyltransferase GidB [Escherichia coli O26:H11 str. 11368]
gi|260870474|ref|YP_003236876.1| methyltransferase GidB [Escherichia coli O111:H- str. 11128]
gi|261225897|ref|ZP_05940178.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli O157:H7 str. FRIK2000]
gi|261258942|ref|ZP_05951475.1| methyltransferase GidB [Escherichia coli O157:H7 str. FRIK966]
gi|293417213|ref|ZP_06659840.1| 16S rRNA methyltransferase GidB [Escherichia coli B185]
gi|293464066|ref|ZP_06664480.1| 16S rRNA methyltransferase GidB [Escherichia coli B088]
gi|297519013|ref|ZP_06937399.1| 16S rRNA methyltransferase GidB [Escherichia coli OP50]
gi|300815005|ref|ZP_07095230.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 107-1]
gi|300824550|ref|ZP_07104660.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 119-7]
gi|300902978|ref|ZP_07120921.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 84-1]
gi|300916391|ref|ZP_07133131.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 115-1]
gi|300932375|ref|ZP_07147640.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 187-1]
gi|300950657|ref|ZP_07164551.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 116-1]
gi|300958748|ref|ZP_07170865.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 175-1]
gi|300984346|ref|ZP_07176952.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 45-1]
gi|301019836|ref|ZP_07183977.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 196-1]
gi|301047563|ref|ZP_07194635.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 185-1]
gi|301305611|ref|ZP_07211701.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 124-1]
gi|301644416|ref|ZP_07244415.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 146-1]
gi|306815908|ref|ZP_07450046.1| 16S rRNA methyltransferase GidB [Escherichia coli NC101]
gi|307140440|ref|ZP_07499796.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|307313188|ref|ZP_07592813.1| methyltransferase GidB [Escherichia coli W]
gi|309795703|ref|ZP_07690118.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 145-7]
gi|312967850|ref|ZP_07782062.1| methyltransferase GidB [Escherichia coli 2362-75]
gi|312971968|ref|ZP_07786142.1| methyltransferase GidB [Escherichia coli 1827-70]
gi|331644467|ref|ZP_08345596.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|331649566|ref|ZP_08350652.1| 16S rRNA methyltransferase GidB [Escherichia coli M605]
gi|331655402|ref|ZP_08356401.1| 16S rRNA methyltransferase GidB [Escherichia coli M718]
gi|331660084|ref|ZP_08361022.1| 16S rRNA methyltransferase GidB [Escherichia coli TA206]
gi|331670591|ref|ZP_08371430.1| 16S rRNA methyltransferase GidB [Escherichia coli TA271]
gi|331679844|ref|ZP_08380514.1| 16S rRNA methyltransferase GidB [Escherichia coli H591]
gi|332282465|ref|ZP_08394878.1| ribosomal RNA small subunit methyltransferase G [Shigella sp. D9]
gi|62288117|sp|P0A6U5|RSMG_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|62288118|sp|P0A6U6|RSMG_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|62288119|sp|P0A6U7|RSMG_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122421809|sp|Q1R4J2|RSMG_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122957079|sp|Q0SYT6|RSMG_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123147503|sp|Q0TAW9|RSMG_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123558240|sp|Q31UN9|RSMG_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123615765|sp|Q3YVP4|RSMG_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224586|sp|A1AHS0|RSMG_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166989744|sp|A8A6K3|RSMG_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039386|sp|B1IWZ8|RSMG_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725354|sp|B7MGG0|RSMG_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725356|sp|B7M596|RSMG_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797824|sp|B5YXE4|RSMG_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797825|sp|B6I3X7|RSMG_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229558760|sp|B1X9W8|RSMG_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691694|sp|B2TUN5|RSMG_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766890|sp|B7UMK5|RSMG_ECO27 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766891|sp|B7L890|RSMG_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766892|sp|B7N2H9|RSMG_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|259495493|sp|C4ZZ18|RSMG_ECOBW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21465733|pdb|1JSX|A Chain A, Crystal Structure Of The Escherichia Coli
Glucose-Inhibited Division Protein B (Gidb)
gi|12518597|gb|AAG58943.1|AE005605_11 glucose-inhibited division; chromosome replication [Escherichia
coli O157:H7 str. EDL933]
gi|26110916|gb|AAN83100.1|AE016769_215 Methyltransferase gidB [Escherichia coli CFT073]
gi|290589|gb|AAA62092.1| glucose inhibited division protein [Escherichia coli]
gi|581247|emb|CAA25774.1| unnamed protein product [Escherichia coli]
gi|1790179|gb|AAC76763.1| 16S rRNA m(7)G527 methyltransferase, SAM-dependent;
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. MG1655]
gi|13364157|dbj|BAB38105.1| glucose-inhibited division protein GidB [Escherichia coli O157:H7
str. Sakai]
gi|30043216|gb|AAP18937.1| glucose-inhibited division protein GidB [Shigella flexneri 2a str.
2457T]
gi|73857711|gb|AAZ90418.1| GldB [Shigella sonnei Ss046]
gi|81247511|gb|ABB68219.1| GidB [Shigella boydii Sb227]
gi|85676298|dbj|BAE77548.1| methyltransferase, glucose-inhibited cell-division protein
[Escherichia coli str. K12 substr. W3110]
gi|91074841|gb|ABE09722.1| putative methyltransferase GidB [Escherichia coli UTI89]
gi|110345673|gb|ABG71910.1| glucose inhibited division protein B [Escherichia coli 536]
gi|110617112|gb|ABF05779.1| glucose-inhibited division [Shigella flexneri 5 str. 8401]
gi|115515135|gb|ABJ03210.1| glucose-inhibited division protein B [Escherichia coli APEC O1]
gi|157068902|gb|ABV08157.1| methyltransferase GidB [Escherichia coli HS]
gi|169757151|gb|ACA79850.1| methyltransferase GidB [Escherichia coli ATCC 8739]
gi|169891076|gb|ACB04783.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187429164|gb|ACD08438.1| methyltransferase GidB [Shigella boydii CDC 3083-94]
gi|187771511|gb|EDU35355.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4196]
gi|188016845|gb|EDU54967.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4113]
gi|188488269|gb|EDU63372.1| methyltransferase GidB [Escherichia coli 53638]
gi|189002346|gb|EDU71332.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4076]
gi|189358956|gb|EDU77375.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4401]
gi|189364706|gb|EDU83125.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4486]
gi|189373248|gb|EDU91664.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC869]
gi|190900205|gb|EDV60095.1| 16S rRNA methyltransferase GidB [Escherichia coli B7A]
gi|190909240|gb|EDV68826.1| 16S rRNA methyltransferase GidB [Escherichia coli F11]
gi|192930543|gb|EDV83150.1| 16S rRNA methyltransferase GidB [Escherichia coli E22]
gi|192955070|gb|EDV85567.1| 16S rRNA methyltransferase GidB [Escherichia coli E110019]
gi|194413862|gb|EDX30140.1| 16S rRNA methyltransferase GidB [Escherichia coli B171]
gi|194425155|gb|EDX41139.1| 16S rRNA methyltransferase GidB [Escherichia coli 101-1]
gi|208728641|gb|EDZ78242.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4206]
gi|208733695|gb|EDZ82382.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4045]
gi|208738796|gb|EDZ86478.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4042]
gi|209160774|gb|ACI38207.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
EC4115]
gi|209753808|gb|ACI75211.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753810|gb|ACI75212.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753812|gb|ACI75213.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753814|gb|ACI75214.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209753816|gb|ACI75215.1| glucose-inhibited division protein GidA [Escherichia coli]
gi|209914480|dbj|BAG79554.1| glucose inhibited division protein B [Escherichia coli SE11]
gi|215267150|emb|CAS11598.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-divisionprotein [Escherichia coli
O127:H6 str. E2348/69]
gi|217320471|gb|EEC28895.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
TW14588]
gi|218354198|emb|CAV00831.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli 55989]
gi|218363080|emb|CAR00718.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli IAI1]
gi|218367584|emb|CAR05368.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli S88]
gi|218429592|emb|CAR10550.2| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli ED1a]
gi|222035453|emb|CAP78198.1| Methyltransferase gidB [Escherichia coli LF82]
gi|226838924|gb|EEH70951.1| methyltransferase gidB [Escherichia sp. 1_1_43]
gi|226902805|gb|EEH89064.1| ribosomal RNA small subunit methyltransferase G [Escherichia sp.
3_2_53FAA]
gi|227839240|gb|EEJ49706.1| glucose-inhibited division protein B [Escherichia coli 83972]
gi|238861773|gb|ACR63771.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli BW2952]
gi|242379278|emb|CAQ34085.1| 16S rRNA m[7]G527 methyltransferase [Escherichia coli BL21(DE3)]
gi|253326669|gb|ACT31271.1| methyltransferase GidB [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253979749|gb|ACT45419.1| glucose-inhibited division protein [Escherichia coli BL21(DE3)]
gi|254595146|gb|ACT74507.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli O157:H7 str. TW14359]
gi|257756494|dbj|BAI27996.1| methyltransferase GidB [Escherichia coli O26:H11 str. 11368]
gi|257761622|dbj|BAI33119.1| methyltransferase GidB [Escherichia coli O103:H2 str. 12009]
gi|257766830|dbj|BAI38325.1| methyltransferase GidB [Escherichia coli O111:H- str. 11128]
gi|260451403|gb|ACX41825.1| methyltransferase GidB [Escherichia coli DH1]
gi|281180798|dbj|BAI57128.1| glucose inhibited division protein B [Escherichia coli SE15]
gi|281603138|gb|ADA76122.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Shigella flexneri 2002017]
gi|291321698|gb|EFE61134.1| 16S rRNA methyltransferase GidB [Escherichia coli B088]
gi|291431244|gb|EFF04237.1| 16S rRNA methyltransferase GidB [Escherichia coli B185]
gi|294493000|gb|ADE91756.1| methyltransferase GidB [Escherichia coli IHE3034]
gi|299882064|gb|EFI90275.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 196-1]
gi|300300549|gb|EFJ56934.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 185-1]
gi|300314629|gb|EFJ64413.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 175-1]
gi|300404973|gb|EFJ88511.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 84-1]
gi|300408382|gb|EFJ91920.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 45-1]
gi|300416295|gb|EFJ99605.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 115-1]
gi|300450027|gb|EFK13647.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 116-1]
gi|300459880|gb|EFK23373.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 187-1]
gi|300522951|gb|EFK44020.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 119-7]
gi|300531897|gb|EFK52959.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 107-1]
gi|300839119|gb|EFK66879.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 124-1]
gi|301077255|gb|EFK92061.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 146-1]
gi|305850304|gb|EFM50761.1| 16S rRNA methyltransferase GidB [Escherichia coli NC101]
gi|306906871|gb|EFN37380.1| methyltransferase GidB [Escherichia coli W]
gi|307555879|gb|ADN48654.1| methyltransferase GidB [Escherichia coli ABU 83972]
gi|307628814|gb|ADN73118.1| 16S rRNA methyltransferase GidB [Escherichia coli UM146]
gi|308120582|gb|EFO57844.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 145-7]
gi|309704188|emb|CBJ03535.1| glucose inhibited division protein [Escherichia coli ETEC H10407]
gi|310334345|gb|EFQ00550.1| methyltransferase GidB [Escherichia coli 1827-70]
gi|312287411|gb|EFR15319.1| methyltransferase GidB [Escherichia coli 2362-75]
gi|312948306|gb|ADR29133.1| 16S rRNA methyltransferase GidB [Escherichia coli O83:H1 str. NRG
857C]
gi|313647644|gb|EFS12092.1| methyltransferase GidB [Shigella flexneri 2a str. 2457T]
gi|315063050|gb|ADT77377.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
coli W]
gi|315138325|dbj|BAJ45484.1| 16S rRNA methyltransferase GidB [Escherichia coli DH1]
gi|315254567|gb|EFU34535.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 85-1]
gi|315285543|gb|EFU44985.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 110-3]
gi|315292826|gb|EFU52178.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 153-1]
gi|315296884|gb|EFU56173.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 16-3]
gi|315618552|gb|EFU99138.1| methyltransferase GidB [Escherichia coli 3431]
gi|320186277|gb|EFW61013.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella flexneri CDC 796-83]
gi|320191156|gb|EFW65806.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. EC1212]
gi|320193715|gb|EFW68348.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli WV_060327]
gi|320201227|gb|EFW75808.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli EC4100B]
gi|320639468|gb|EFX09083.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
G5101]
gi|320644908|gb|EFX13944.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H- str.
493-89]
gi|320650174|gb|EFX18670.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H- str. H
2687]
gi|320655523|gb|EFX23458.1| 16S rRNA methyltransferase GidB [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661146|gb|EFX28582.1| 16S rRNA methyltransferase GidB [Escherichia coli O55:H7 str. USDA
5905]
gi|320666275|gb|EFX33281.1| 16S rRNA methyltransferase GidB [Escherichia coli O157:H7 str.
LSU-61]
gi|323155421|gb|EFZ41604.1| methyltransferase GidB [Escherichia coli EPECa14]
gi|323161008|gb|EFZ46927.1| methyltransferase GidB [Escherichia coli E128010]
gi|323167014|gb|EFZ52753.1| methyltransferase GidB [Shigella sonnei 53G]
gi|323173365|gb|EFZ58994.1| methyltransferase GidB [Escherichia coli LT-68]
gi|323177760|gb|EFZ63344.1| methyltransferase GidB [Escherichia coli 1180]
gi|323189527|gb|EFZ74807.1| methyltransferase GidB [Escherichia coli RN587/1]
gi|323380888|gb|ADX53156.1| methyltransferase GidB [Escherichia coli KO11]
gi|323934909|gb|EGB31287.1| glucose inhibited division protein [Escherichia coli E1520]
gi|323944216|gb|EGB40296.1| glucose inhibited division protein [Escherichia coli H120]
gi|323949983|gb|EGB45867.1| glucose inhibited division protein [Escherichia coli H252]
gi|323954965|gb|EGB50743.1| glucose inhibited division protein [Escherichia coli H263]
gi|323959806|gb|EGB55456.1| glucose inhibited division protein [Escherichia coli H489]
gi|323971219|gb|EGB66465.1| glucose inhibited division protein [Escherichia coli TA007]
gi|324008008|gb|EGB77227.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 57-2]
gi|324018462|gb|EGB87681.1| 16S rRNA methyltransferase GidB [Escherichia coli MS 117-3]
gi|324115904|gb|EGC09830.1| glucose inhibited division protein [Escherichia coli E1167]
gi|326340512|gb|EGD64311.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. 1044]
gi|326341578|gb|EGD65367.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli O157:H7 str. 1125]
gi|330908053|gb|EGH36572.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Escherichia coli AA86]
gi|331036761|gb|EGI08987.1| 16S rRNA methyltransferase GidB [Escherichia coli H736]
gi|331042064|gb|EGI14208.1| 16S rRNA methyltransferase GidB [Escherichia coli M605]
gi|331047417|gb|EGI19495.1| 16S rRNA methyltransferase GidB [Escherichia coli M718]
gi|331053299|gb|EGI25332.1| 16S rRNA methyltransferase GidB [Escherichia coli TA206]
gi|331062653|gb|EGI34573.1| 16S rRNA methyltransferase GidB [Escherichia coli TA271]
gi|331073016|gb|EGI44341.1| 16S rRNA methyltransferase GidB [Escherichia coli H591]
gi|332089410|gb|EGI94514.1| methyltransferase GidB [Shigella boydii 3594-74]
gi|332104817|gb|EGJ08163.1| ribosomal RNA small subunit methyltransferase G [Shigella sp. D9]
gi|332345730|gb|AEE59064.1| methyltransferase GidB [Escherichia coli UMNK88]
gi|332750749|gb|EGJ81157.1| methyltransferase GidB [Shigella flexneri 4343-70]
gi|332750897|gb|EGJ81303.1| methyltransferase GidB [Shigella flexneri K-671]
gi|332751743|gb|EGJ82141.1| methyltransferase GidB [Shigella flexneri 2747-71]
gi|332764003|gb|EGJ94240.1| methyltransferase GidB [Shigella flexneri 2930-71]
gi|332995987|gb|EGK15614.1| methyltransferase GidB [Shigella flexneri VA-6]
gi|332997090|gb|EGK16706.1| methyltransferase GidB [Shigella flexneri K-218]
gi|333013464|gb|EGK32835.1| methyltransferase GidB [Shigella flexneri K-304]
Length = 207
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 64 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|332998036|gb|EGK17641.1| methyltransferase GidB [Shigella flexneri K-272]
gi|333013714|gb|EGK33079.1| methyltransferase GidB [Shigella flexneri K-227]
Length = 207
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 64 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHQL 154
>gi|326512668|dbj|BAJ99689.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP------ 70
+T ++S + ++ + + L W++++NL + + + RHV DSL V
Sbjct: 44 STTSLSPQQQRQVSLYVDVLLDWNQRMNLTTVTDEAEVMTRHVVDSLAVLPPLERAYTSR 103
Query: 71 ----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSG G PG+I ++ S + L+ES K+ +FL + V+
Sbjct: 104 GGDISGISLVDVGSGAGLPGLILAVARPSWK---FTLLESMRKRCTFLEHAVEVMGLSNV 160
Query: 127 -VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
V R + A Q + + DV +ARA+A+L L EY P +
Sbjct: 161 DVVCDRAENAGQNHDLRESFDVAAARAVAELKILAEYCLPLVR 203
>gi|157373140|ref|YP_001481129.1| 16S rRNA methyltransferase GidB [Serratia proteamaculans 568]
gi|166989555|sp|A8GLL1|RSMG_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157324904|gb|ABV44001.1| methyltransferase GidB [Serratia proteamaculans 568]
Length = 206
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 10/158 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+S+L+A + ++L + + KW+K NL S + +RH+ DS+ V
Sbjct: 6 DSLLKAA----GITLPDRQKQQLLGYVGMLDKWNKAYNLTSVRDPQQMLVRHILDSI-VV 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 61 NPHLQGKRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLTNV 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L +L +
Sbjct: 118 EPVQSRVEEFPAE-PPFDGVISRAFASLQDMLSWCHHL 154
>gi|270290031|ref|ZP_06196257.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
gi|270281568|gb|EFA27400.1| 16S rRNA methyltransferase GidB [Pediococcus acidilactici 7_4]
Length = 243
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R VS + + + +Y ++ ++ +NL + + ++ +++H DS+
Sbjct: 2 NPEEFRQALAERGRTVSDHQMWQFDTYYKRLVETNEHVNLTAITDEKEVYLKHFYDSVTP 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
Q D+G+G GFP + I L ++ V +++S NK+ FL+ +V +
Sbjct: 62 LLEAPQFFTPGIALCDVGAGAGFPSLPMKILLPELK---VTIVDSLNKRIKFLQALVDEL 118
Query: 122 AA-RGKVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R + + +++ARA+A L L E P + Q
Sbjct: 119 GLTDVELVHDRAETFGAKKSAYRASFALVTARAVARLSVLSELCLPLVKQ 168
>gi|152972649|ref|YP_001337795.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238897247|ref|YP_002921995.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae NTUH-K2044]
gi|166224594|sp|A6TG44|RSMG_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150957498|gb|ABR79528.1| glucose-inhibited division protein B [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549577|dbj|BAH65928.1| glucose-inhibited division protein B [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 207
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ +++ +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSRLLDEAGISLTDHQKNQLVAYVGLLDKWNKAYNLTSVRDPNEMLVRHILDSIIVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 L-QGSRFIDVGTGPGLPGIPLAIVCPESH---FTLLDSLGKRVRFLRQVQHELKLDNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEAFPAE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|148907902|gb|ABR17072.1| unknown [Picea sitchensis]
Length = 301
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------ 74
+S + E+ F L+W++++NL + + RHVEDSL + +
Sbjct: 71 LSMKQQEQTSLFVNTLLEWNQRMNLTAVTEHCAVMERHVEDSLALLPIIENAYKNNCPTM 130
Query: 75 ------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+D+GSG G PGII +I + + LIES K+ FL +VV + +V
Sbjct: 131 ESVRLNLVDVGSGAGLPGIILAIARPDWQ---ITLIESLQKRCFFLEHVVDVSGLSNAQV 187
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++A P D+ ARA+AD+ L EY P +
Sbjct: 188 VRIRAEDAGQNPDFREKYDIAVARAVADMRILAEYCLPLVR 228
>gi|295101871|emb|CBK99416.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
L2-6]
Length = 235
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++ L++L+ F + +++++K+NL + + E +H DSL
Sbjct: 7 LEQKCSTWNIALTGTQLDRLDAFAEILVEYNQKVNLTAITDPEGIEDKHFLDSLLFASQP 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA
Sbjct: 67 EVAGKMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVEFLKYACGQLGLTGVEFA 123
Query: 130 -CRIQEAPQM--ITTCDVISARALADLDTLLEYSFPWLY 165
R +EA + D+ SARA+A L L EY P +
Sbjct: 124 KERAEEAARKAWREQFDLASARAVAALPVLAEYCLPLVK 162
>gi|125596647|gb|EAZ36427.1| hypothetical protein OsJ_20757 [Oryza sativa Japonica Group]
Length = 295
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-------YPS 73
+S ++ + L W++++NL + + + RHV DSL V
Sbjct: 64 LSPSQQRQVSLYVDALLDWNQRMNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDLGGM 123
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
+D+GSG G PG+I ++ S + L+ES K+ FL + V+ V R
Sbjct: 124 RLVDVGSGAGLPGLILAVARPSWK---FTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRA 180
Query: 133 Q---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++P DV ARA+A+L L EY P +
Sbjct: 181 ENVGQSPDFREAFDVAVARAVAELKVLAEYCLPLVR 216
>gi|332366130|gb|EGJ43886.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1059]
Length = 237
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIGNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDRAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|298489531|ref|ZP_07007540.1| Methyltransferase gidB [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298155958|gb|EFH97069.1| Methyltransferase gidB [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 211
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R +
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-NY 132
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 133 QPDAPFDGIISRAFSSLEDFTGWT 156
>gi|270264086|ref|ZP_06192353.1| ribosomal RNA small subunit methyltransferase G [Serratia odorifera
4Rx13]
gi|270041735|gb|EFA14832.1| ribosomal RNA small subunit methyltransferase G [Serratia odorifera
4Rx13]
Length = 206
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ + + ++L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLDSLLSAAGIALPDQQKQQLLGYVGMLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNP 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H S +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 63 HLQGSRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLTNIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L +L +
Sbjct: 120 VQSRVEEFPAE-PPFDGVISRAFASLQDMLSWCHHL 154
>gi|157144376|ref|YP_001451695.1| 16S rRNA methyltransferase GidB [Citrobacter koseri ATCC BAA-895]
gi|166224581|sp|A8ACP6|RSMG_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157081581|gb|ABV11259.1| hypothetical protein CKO_00080 [Citrobacter koseri ATCC BAA-895]
Length = 207
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ +++ +L + + KW+K NL S + +RH+ DS+ +
Sbjct: 4 KLSRLLDEAGISLTDHQKNQLIAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVMAP- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H +ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 63 HLQGERFIDVGTGPGLPGIPLSIVRPESH---FTLLDSLGKRVRFLRQVQHELKLENITP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A LD +L +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLDDMLSWCRHL 154
>gi|28209871|ref|NP_780815.1| 16S rRNA methyltransferase GidB [Clostridium tetani E88]
gi|38257542|sp|Q899S0|RSMG_CLOTE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28202306|gb|AAO34752.1| glucose inhibited division protein B [Clostridium tetani E88]
Length = 239
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MKY D IL + + + +W+KKINL + + ED +H
Sbjct: 1 MKYYD---ILNSACNDVGIGFDENKYNAFIKYKSMIQEWNKKINLTAITEDEDIIKKHFI 57
Query: 61 DSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D +++++ + +D+G+G GFPGI I E V L++S NK+ FL V
Sbjct: 58 DCIKIYKFDKFKKLNKIMDVGTGAGFPGIPIKILEEEKE---VILLDSLNKRIKFLDEVS 114
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++ K R ++ + D + +RA+A++ L E+ P++
Sbjct: 115 KELKLENIKNLHGRAEDYAQKEEFREQFDGVVSRAVANISVLSEFCLPYIR 165
>gi|258622944|ref|ZP_05717959.1| Glucose inhibited division protein [Vibrio mimicus VM573]
gi|258584727|gb|EEW09461.1| Glucose inhibited division protein [Vibrio mimicus VM573]
Length = 210
Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
T +V+ + E+L + L KW+K NL S + ++H+ DSL V +H +ID
Sbjct: 16 TLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSVHLEGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I + L++S K+ FL+ V+ + + R++E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHELKINNVLPVQSRVEEF- 130
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + ++ +
Sbjct: 131 DPDQGFDGVLSRAFASMTDMVNWCQHL 157
>gi|256545942|ref|ZP_05473297.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
gi|256398364|gb|EEU11986.1| 16S rRNA methyltransferase GidB [Anaerococcus vaginalis ATCC 51170]
Length = 209
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K + + + ++ +KK NL S ++ I+H EDSL + +D+GSG GFP
Sbjct: 1 MDKFKIYEQMLIETNKKFNLTSIDDPKEIRIKHFEDSLTIKSYINKGMKVLDIGSGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITTCD 143
GI I+ + LI+S NKK +F+ V+++ + K R ++ A D
Sbjct: 61 GIPLRIET----DFDLTLIDSVNKKVNFMNEVIEELKLEKAKAIHIRAEDYAKDHREEFD 116
Query: 144 VISARALADLDTLLEYSFPWLY 165
++ +RA+A+L TL EY+ P+L
Sbjct: 117 MVISRAVANLSTLSEYALPFLK 138
>gi|209966080|ref|YP_002298995.1| methyltransferase GidB [Rhodospirillum centenum SW]
gi|226797829|sp|B6IV59|RSMG_RHOCS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|209959546|gb|ACJ00183.1| methyltransferase GidB [Rhodospirillum centenum SW]
Length = 216
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 66/158 (41%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
RA + VSRETL++L + L KW+ INLV+ ST++D W RH DS ++F L
Sbjct: 11 FRATDFQAAFGVSRETLDRLAAYEALLRKWNPAINLVARSTLDDVWERHFADSAQLFALL 70
Query: 70 PYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLGSG GFPG++ +I + V+LIES +KA+FLR V + T A V
Sbjct: 71 PEGTRVLVDLGSGAGFPGLVLAI----LGVPEVHLIESDGRKAAFLREVARVTGAPATVH 126
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A R ++A D +SARALADL LL + +L
Sbjct: 127 AQRAEQAEA--PPADAVSARALADLSALLPLAARFLRP 162
>gi|262367752|gb|ACY64309.1| glucose inhibited division protein B [Yersinia pestis D182038]
Length = 173
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + + +L + L KW+K NL S + +RH+ DS+ V H
Sbjct: 5 LDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LQGSRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLNNIEPV 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L +L +
Sbjct: 121 QSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHL 154
>gi|13473774|ref|NP_105342.1| 16S rRNA methyltransferase GidB [Mesorhizobium loti MAFF303099]
gi|20177897|sp|Q98DZ2|RSMG_RHILO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14024525|dbj|BAB51128.1| glucose inhibited division protein B; GidB [Mesorhizobium loti
MAFF303099]
Length = 210
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 60/145 (41%), Positives = 94/145 (64%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++ ++ P + W+D+GS
Sbjct: 16 VSRETFDRLVAFEAMFQKWNRSINLVAQSTAGDVWQRHILDSAQLARIEPNATHWVDIGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ G ++L+E KKASFL+ V+ + +V A RI+++ ++
Sbjct: 76 GGGFPGLVMAFLLAERAGASIDLVECNRKKASFLQTVIGQFNLPARVVARRIKDSHALVP 135
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
+++ARALA L LLE + PWL
Sbjct: 136 QPQIVTARALASLSVLLELTAPWLT 160
>gi|258626069|ref|ZP_05720920.1| Glucose inhibited division protein [Vibrio mimicus VM603]
gi|262166772|ref|ZP_06034509.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
VM223]
gi|262172751|ref|ZP_06040429.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
MB-451]
gi|258581595|gb|EEW06493.1| Glucose inhibited division protein [Vibrio mimicus VM603]
gi|261893827|gb|EEY39813.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
MB-451]
gi|262026488|gb|EEY45156.1| ribosomal RNA small subunit methyltransferase G [Vibrio mimicus
VM223]
Length = 210
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
T +V+ + E+L + L KW+K NL S + ++H+ DSL V +H +ID
Sbjct: 16 TLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSVHLEGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I + L++S K+ FL+ V+ + + R++E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHELKINNVLPVQSRVEEF- 130
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + ++ +
Sbjct: 131 DPEQGFDGVLSRAFASMTDMVNWCQHL 157
>gi|289628221|ref|ZP_06461175.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289649111|ref|ZP_06480454.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 211
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLTKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R +
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-NY 132
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 133 QPDAPFDGIISRAFSSLEDFTGWT 156
>gi|163745109|ref|ZP_02152469.1| methyltransferase GidB [Oceanibulbus indolifex HEL-45]
gi|161381927|gb|EDQ06336.1| methyltransferase GidB [Oceanibulbus indolifex HEL-45]
Length = 201
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 65/147 (44%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETL+KLE F L KW+ KINLVS S+++D W RH+ DS++VF+L W+D+G
Sbjct: 8 DVSRETLQKLEAFAELVRKWNPKINLVSKSSLDDLWDRHILDSVQVFRLVEQGGNWVDIG 67
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPGI+ +I + V L+ES +K +FLR +++ V RI+ A +
Sbjct: 68 SGGGFPGIVIAILNQKEQKFRVRLVESDQRKCAFLRTAIRELGLTATVDNERIENAQNL- 126
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D++SARAL+DL LL Y+ L
Sbjct: 127 -EADILSARALSDLSQLLAYAEMHLKP 152
>gi|302063885|ref|ZP_07255426.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
K40]
gi|302131969|ref|ZP_07257959.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|330876346|gb|EGH10495.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330964188|gb|EGH64448.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 214
Score = 169 bits (430), Expect = 8e-41, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + W+D
Sbjct: 21 GIDLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWMD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I ++L++S KK F V + +V R +
Sbjct: 80 VGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-NY 135
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 136 QPDVPFDGIISRAFSSLEDFAGWT 159
>gi|330987012|gb|EGH85115.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011894|gb|EGH91950.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 214
Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 21 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R + +
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SY 135
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 136 QPEVPFDGIISRAFSSLEDFTGWT 159
>gi|71733888|ref|YP_277290.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|123634470|sp|Q48BF5|RSMG_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71554441|gb|AAZ33652.1| methyltransferase GidB [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 211
Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I G V L++S KK F V + +V R + +
Sbjct: 77 VGSGGGMPGIPMAILFPE---GKVALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SY 132
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 133 QPEVPFDGIISRAFSSLEDFTGWT 156
>gi|66048355|ref|YP_238196.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
B728a]
gi|75499949|sp|Q4ZL14|RSMG_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|63259062|gb|AAY40158.1| Glucose inhibited division protein [Pseudomonas syringae pv.
syringae B728a]
gi|330881915|gb|EGH16064.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330952341|gb|EGH52601.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae Cit 7]
gi|330970318|gb|EGH70384.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aceris
str. M302273PT]
gi|330976395|gb|EGH76452.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 214
Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 21 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R + +
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SY 135
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 136 QPEVPFDGIISRAFSSLEDFTGWT 159
>gi|322835094|ref|YP_004215121.1| methyltransferase GidB [Rahnella sp. Y9602]
gi|321170295|gb|ADW75994.1| methyltransferase GidB [Rahnella sp. Y9602]
Length = 206
Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + ++L + L KW+K NL S +RH+ DS+ V H
Sbjct: 5 LDSLLAAAGIALPDQQKQQLIGYVELLHKWNKAYNLTSVRDPMQMLVRHIMDSI-VVNEH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
S +ID+G+G G PGI +I L++S K+ FLR V + + +
Sbjct: 64 LQGSRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLKNIEPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L +L +
Sbjct: 121 QSRVEEF-EPDPLFDGVISRAFASLQDMLSWCHHL 154
>gi|183597129|ref|ZP_02958622.1| hypothetical protein PROSTU_00368 [Providencia stuartii ATCC 25827]
gi|188023439|gb|EDU61479.1| hypothetical protein PROSTU_00368 [Providencia stuartii ATCC 25827]
Length = 207
Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ R + L N ++ + ++L + L KW+K NL S + IRH+ DS+ V
Sbjct: 6 QLTRLSALAN-IELTDQQKQQLVGYVELLAKWNKAYNLTSVRDPQQMLIRHIMDSI-VVN 63
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ +ID+G+G G PG+ +I L++S K+ FL+ V + +
Sbjct: 64 GQLKGTSFIDVGTGPGLPGVPLAIVRPDSH---FVLLDSLGKRIRFLKQVQHELGLNNIE 120
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A L +L +
Sbjct: 121 PLQSRVEE-YQPEAGFDGVISRAFASLSDMLSWCHHL 156
>gi|325688172|gb|EGD30191.1| glucose inhibited division protein B [Streptococcus sanguinis SK72]
Length = 237
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIENQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|332363406|gb|EGJ41191.1| glucose inhibited division protein B [Streptococcus sanguinis SK49]
Length = 237
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIVNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|261867024|ref|YP_003254946.1| 16S rRNA methyltransferase GidB [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412356|gb|ACX81727.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 227
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 2 KYCDSNSILRANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
K S+ + + LL + + ++L F L KW+K NL S +D ++H+
Sbjct: 17 KESISSMKAKLDSLLAQAKIQPNDQQKQQLIDFVNLLNKWNKAYNLTSVRDPQDMLVKHI 76
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DSL V H +ID+G+G G PG+ +I + L++S K+ SF+R V+
Sbjct: 77 LDSL-VVSPHLQGDRFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRISFIRNAVR 132
Query: 120 KTAARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ R++E Q D + +RA A L + E+
Sbjct: 133 ELGLTNVKPVLSRVEE-YQPEEKFDGVLSRAFASLKDMTEWC 173
>gi|253681207|ref|ZP_04862005.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
gi|253562445|gb|EES91896.1| 16S rRNA methyltransferase GidB [Clostridium botulinum D str. 1873]
Length = 243
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL + + + + L W+ K+NL + + ++ +H DS+++FQ
Sbjct: 9 DILNVAASSMGLEFNDKKYNQFIKYKDLLKDWNSKVNLTAITEDKEIIKKHFIDSMKIFQ 68
Query: 68 L--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ ID+G+GGGFPGI I ++ + L++S K+ + L ++ K
Sbjct: 69 FEYLKKANRIIDIGTGGGFPGIPMKIIRPEVK---MVLLDSLRKRINVLDDILCKIGIDD 125
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E P+ D + +RA+A+L L E+ P++
Sbjct: 126 VETIHGRAEEFSRNPKYREQFDAVVSRAVANLAALSEFCLPYVK 169
>gi|82779068|ref|YP_405417.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae Sd197]
gi|309784451|ref|ZP_07679090.1| methyltransferase GidB [Shigella dysenteriae 1617]
gi|123561166|sp|Q329S9|RSMG_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81243216|gb|ABB63926.1| GldB [Shigella dysenteriae Sd197]
gi|308927958|gb|EFP73426.1| methyltransferase GidB [Shigella dysenteriae 1617]
Length = 207
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL ++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDAGIPLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 64 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|323939197|gb|EGB35410.1| glucose inhibited division protein [Escherichia coli E482]
Length = 207
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL + +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDASISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 64 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|188535591|ref|YP_001909388.1| 16S rRNA methyltransferase GidB [Erwinia tasmaniensis Et1/99]
gi|238689684|sp|B2VCB2|RSMG_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188030633|emb|CAO98529.1| Methyltransferase GidB (Glucose-inhibited division protein B)
[Erwinia tasmaniensis Et1/99]
Length = 205
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A ++S ++L + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 5 LSALLKTAGISLSDRQKQQLVGYVEMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PG+ +I G L++S K+ FL+ V +
Sbjct: 64 LIGERFIDVGTGPGLPGVPLAIVRP---GAHFTLLDSLGKRVRFLKQVQHELKLDNITPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A L+ ++ +
Sbjct: 121 QSRVEEFAGE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|302185833|ref|ZP_07262506.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
642]
Length = 211
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVSFI-EGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R + +
Sbjct: 77 VGSGGGMPGIPMAILFPQCQ---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SY 132
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 133 QPEVPFDGIISRAFSSLEDFTGWT 156
>gi|290473124|ref|YP_003465985.1| glucose-inhibited division protein [Xenorhabdus bovienii SS-2004]
gi|289172418|emb|CBJ79185.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Xenorhabdus bovienii SS-2004]
Length = 206
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + +S E ++L + + KW+K NL S E +RH+ DS+ V
Sbjct: 5 LESLLVKTDIVLSLEQKQQLIAYVDMLNKWNKAYNLTSVRDPEQMLVRHIMDSIVVNPFL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ + +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 65 -HGTRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLKNIDPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A L +L +
Sbjct: 121 QSRVEEFIPE-PPFDGVISRAFASLQDMLSWCRHL 154
>gi|194431148|ref|ZP_03063441.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae 1012]
gi|194420603|gb|EDX36679.1| 16S rRNA methyltransferase GidB [Shigella dysenteriae 1012]
gi|320180078|gb|EFW55020.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Shigella boydii ATCC 9905]
gi|332084594|gb|EGI89788.1| methyltransferase GidB [Shigella boydii 5216-82]
gi|332084733|gb|EGI89919.1| methyltransferase GidB [Shigella dysenteriae 155-74]
Length = 207
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-V 127
+ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 64 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIGP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|325291445|ref|YP_004267626.1| Ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
gi|324966846|gb|ADY57625.1| Ribosomal RNA small subunit methyltransferase G [Syntrophobotulus
glycolicus DSM 8271]
Length = 251
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI- 74
L + S L++ F L L W++++NL + + +D ++H DSL +
Sbjct: 16 LADFEPSLFQLDQFWKFGELLLDWNERMNLTAITEPKDVVVKHFLDSLISIPIIRDMEKN 75
Query: 75 -----------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
DLG+GGGFPGI I LS + + L++S K+ FL+ V+++
Sbjct: 76 EKIMGSGKELMLADLGTGGGFPGIPLKIALSHLN---ITLMDSLLKRLGFLQTVIKELGL 132
Query: 124 R-GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R R ++A P D+++ARALADL LLEY+ P L
Sbjct: 133 RKISTHHARAEDAGHDPAFRQQFDIVTARALADLPVLLEYTVPLLK 178
>gi|227534572|ref|ZP_03964621.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187821|gb|EEI67888.1| methyltransferase gidB (glucose-inhibited division protein B)
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 247
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 74/176 (42%), Gaps = 12/176 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+ + + ++ ++ +Y + ++K+NL + D +++H
Sbjct: 1 MEAGMDPAAFVQALADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFY 60
Query: 61 DSLRVFQLHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL + + P D+G+G GFP I I ++ + +++S K+ FL
Sbjct: 61 DSLTLALVLPELQTQVMSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLER 117
Query: 117 VVQKTAA-RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + ++F R + + D+++ARA+A LD L E P + +
Sbjct: 118 LTARLELTDVQLFHDRAETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQ 173
>gi|191637023|ref|YP_001986189.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BL23]
gi|190711325|emb|CAQ65331.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Lactobacillus casei BL23]
gi|327381050|gb|AEA52526.1| 16S rRNA methyltransferase GidB [Lactobacillus casei LC2W]
Length = 247
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 74/176 (42%), Gaps = 12/176 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+ + + ++ ++ +Y + ++K+NL + D +++H
Sbjct: 1 MEAGMDPAAFVQALADHGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFY 60
Query: 61 DSLRVFQLHPYPSI----WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL + + P D+G+G GFP I I ++ + +++S K+ FL
Sbjct: 61 DSLTLALVLPELQTQVMSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLER 117
Query: 117 VVQKTAA-RGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + ++F R + + D+++ARA+A LD L E P + +
Sbjct: 118 LTARLELTDVQLFHDRAETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQ 173
>gi|324993451|gb|EGC25371.1| glucose inhibited division protein B [Streptococcus sanguinis
SK405]
gi|327461725|gb|EGF08056.1| glucose inhibited division protein B [Streptococcus sanguinis SK1]
gi|327473446|gb|EGF18866.1| glucose inhibited division protein B [Streptococcus sanguinis
SK408]
gi|327489010|gb|EGF20805.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1058]
Length = 237
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E+++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKDQFEHYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQALIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQNKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|328945626|gb|EGG39777.1| glucose inhibited division protein B [Streptococcus sanguinis
SK1087]
Length = 237
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ + E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKNQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ A + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIIYPQLD---VTIIDSLNKRINFLKLLAEELALDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q T D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRTQFDLVTARAVARMQVLSELTIPYLK 165
>gi|327469077|gb|EGF14549.1| glucose inhibited division protein B [Streptococcus sanguinis
SK330]
Length = 237
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ ++ E ++ L ++W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELNDRQKDQFERYFELLVEWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQDR 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQMD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|238783014|ref|ZP_04627041.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
bercovieri ATCC 43970]
gi|238716015|gb|EEQ08000.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
bercovieri ATCC 43970]
Length = 206
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 8 SILRANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+++ N LLN + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MLIKLNSLLNAADIELPDQQKLQLIGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLQGRRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELGLSN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E D + +RA A L +L +
Sbjct: 117 IEPVQSRVEEFAAN-PPFDGVISRAFASLQDMLSWCHHL 154
>gi|28872708|ref|NP_795327.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213968449|ref|ZP_03396592.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato T1]
gi|301384264|ref|ZP_07232682.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tomato
Max13]
gi|37999548|sp|Q87TS4|RSMG_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28855964|gb|AAO59022.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213926737|gb|EEB60289.1| glucose-inhibited division protein B [Pseudomonas syringae pv.
tomato T1]
Length = 211
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + W+D
Sbjct: 18 GIDLSEAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWMD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I ++L++S KK F V + +V R +
Sbjct: 77 VGSGGGMPGIPMAILFPERN---ISLLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-NY 132
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 133 QPDVPFDGIISRAFSSLEDFAGWT 156
>gi|118444066|ref|YP_876981.1| 16S rRNA methyltransferase GidB [Clostridium novyi NT]
gi|189039496|sp|A0PX79|RSMG_CLONN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118134522|gb|ABK61566.1| glucose-inhibited division protein B [Clostridium novyi NT]
Length = 243
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWI 76
+ + + + L W+ K+NL + + E+ +H DS+++FQ + I
Sbjct: 20 LEFNDKKYNQFIQYKDLLKDWNGKVNLTAITEDEEIIKKHFIDSMKIFQFEYLRKANKII 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA 135
D+G+GGGFPGI I + + L++S K+ + L ++ K + R +E
Sbjct: 80 DIGTGGGFPGIPMKIMRPDAD---IVLLDSLKKRINVLDDILNKIGINDVETIHGRAEEF 136
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLY 165
P+ D + +RA+A+L +L E+ P++
Sbjct: 137 AKNPKYREKFDAVVSRAVANLASLSEFCLPYVK 169
>gi|91974911|ref|YP_567570.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisB5]
gi|123763116|sp|Q13E20|RSMG_RHOPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91681367|gb|ABE37669.1| methyltransferase GidB [Rhodopseudomonas palustris BisB5]
Length = 233
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/152 (38%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET +L+ + L +W K NLV+ ST+ W RHV DSL++ L P W
Sbjct: 22 LQLTPVSRETERRLDAYLDLLRQWQAKTNLVAPSTLPQLWTRHVADSLQLLTLAPDARRW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPGI+ + ++ +GG V L+E KKA+FLR ++ T + G V I +
Sbjct: 82 LDFGSGGGFPGIVLACAMAEHDGGHVTLVERNAKKAAFLREALRVTGSPGTVMLADIGDN 141
Query: 136 PQMITT-CDVISARALADLDTLLEYSFPWLYQ 166
D I+ARA+A L L+ ++ P + +
Sbjct: 142 VDRFPQGLDCITARAVAPLHQLIGFARPLMTE 173
>gi|260774972|ref|ZP_05883872.1| ribosomal RNA small subunit methyltransferase G [Vibrio
coralliilyticus ATCC BAA-450]
gi|260609062|gb|EEX35221.1| ribosomal RNA small subunit methyltransferase G [Vibrio
coralliilyticus ATCC BAA-450]
Length = 210
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A VS ++L + + KW+K NL S D ++H+ DS+ V H
Sbjct: 8 LDALIAQTKLEVSDNQRDQLVGYVEMLNKWNKAYNLTSVRDPSDMLVKHILDSI-VVSSH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI SI E L++S K+ F++ V+ +
Sbjct: 67 LQGQRFIDVGTGPGLPGIPLSIMNPDKE---FYLLDSLGKRIRFIKQVLHELKIENVTPI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A + ++E+
Sbjct: 124 QSRVEEF-QPQDKFDGVLSRAFASMVDMVEWCHHL 157
>gi|257485606|ref|ZP_05639647.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 211
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R + +
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SY 132
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 133 QPEVPFDGIISRAFSSLEDFTGWT 156
>gi|262402092|ref|ZP_06078656.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC586]
gi|262351738|gb|EEZ00870.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC586]
Length = 210
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
T +V+ + E+L + L KW+K NL S + ++H+ DSL V +H +ID
Sbjct: 16 TLSVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSVHLEGERFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I + L++S K+ FL+ V+ + + R++E
Sbjct: 75 VGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHELKIDNVLPVQSRVEEF- 130
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + ++ +
Sbjct: 131 DPEQGFDGVLSRAFASMTDMVNWCQHL 157
>gi|293391122|ref|ZP_06635456.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951656|gb|EFE01775.1| glucose-inhibited division protein B [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 232
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 6 SNSILRANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
S+ + + LL + + ++L L KW+K NL S +D ++H+ DSL
Sbjct: 21 SSMKTKLDSLLAQAKIQPNDQQKQQLIDLVNLLNKWNKAYNLTSVRDPQDMLVKHILDSL 80
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V +ID+G+G G PG+ +I + L++S K+ SF+R V+K
Sbjct: 81 VVSPYL-QGDRFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRISFIRNAVRKLGL 136
Query: 124 RGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A L + E+
Sbjct: 137 TNVKPVLSRVEE-YQPEEKFDGVLSRAFASLKDMAEWCRHL 176
>gi|160946573|ref|ZP_02093776.1| hypothetical protein PEPMIC_00531 [Parvimonas micra ATCC 33270]
gi|158446957|gb|EDP23952.1| hypothetical protein PEPMIC_00531 [Parvimonas micra ATCC 33270]
Length = 244
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-- 67
L++ +S LEK E + L L+W++KINL + + E +H D L + +
Sbjct: 11 LKSLTQKENIILSDIALEKFEIYRKLILEWNEKINLTAITDEEAMNTKHFLDCLLLTKTG 70
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
L +D+G+G GFP I + +++ V +++S NK+ FL V++ + K
Sbjct: 71 LFDDDKSILDVGTGAGFPAIPLKLYNENLK---VTMLDSLNKRIKFLNIVIEDLNLKNIK 127
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E + D++S+RA+A L LLE++ P+L
Sbjct: 128 AIHGRAEEVGRKEGFRESFDIVSSRAVASLSLLLEFTIPFLK 169
>gi|289677541|ref|ZP_06498431.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. syringae
FF5]
gi|320321680|gb|EFW77779.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331117|gb|EFW87088.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 211
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R + +
Sbjct: 77 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SY 132
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D I +RA + L+ ++
Sbjct: 133 QPEVPFDGIISRAFSSLEDFTGWT 156
>gi|224823522|ref|ZP_03696631.1| methyltransferase GidB [Lutiella nitroferrum 2002]
gi|224603977|gb|EEG10151.1| methyltransferase GidB [Lutiella nitroferrum 2002]
Length = 208
Score = 169 bits (428), Expect = 1e-40, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++++E + +LE + L KW++ NL + E H+ DSL + + +D
Sbjct: 15 KLDLTQEQIARLESYLALLAKWNQTYNLTAVREEERMVSYHLLDSLTLVPQLAGGTRLLD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSGGG PGI +I ++ V L++S +KK +FLR V + EA Q
Sbjct: 75 VGSGGGMPGIPAAIARPDLQ---VVLLDSNHKKTTFLRQAVIELKLDNVEVVTNRVEAYQ 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
D I++RA A+L ++ + L
Sbjct: 132 PEQKFDRITSRAFAELAEFVKLTRHLLAP 160
>gi|146313754|ref|YP_001178828.1| 16S rRNA methyltransferase GidB [Enterobacter sp. 638]
gi|166989745|sp|A4WGE7|RSMG_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145320630|gb|ABP62777.1| 16S rRNA m(7)G-527 methyltransferase [Enterobacter sp. 638]
Length = 207
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K NL S + IRH+ DS+ V
Sbjct: 4 KLSRLLEQAGISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLIRHILDSIVVAP- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H +ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 63 HLRGERFIDVGTGPGLPGIPLSIVRPECH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++ P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEAFPSE-PPFDGVISRAFASLNDMVSWC 151
>gi|167044776|gb|ABZ09445.1| putative glucose inhibited division protein [uncultured marine
microorganism HF4000_APKG8C21]
Length = 304
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+A ++S +E+ +Y W+ ++NL S + ED H DSL V
Sbjct: 69 ELLKAGTAALGIHLSLAQIERFRAYYQEIANWNTRVNLTSVTRWEDVQTTHFVDSLTVSL 128
Query: 68 LHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P +D+GSG GFPGI I G V LIES KK +FL ++
Sbjct: 129 AIPRAVLESGWIVDVGSGAGFPGIPLKIAFP---GARVTLIESTGKKTAFLSHLTHALGL 185
Query: 124 -RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPW-------LYQKK 168
V R + P++ + D + +RA+A + L+E + P+ + QKK
Sbjct: 186 EDVDVRTGRAEALAHDPELRESFDCVVSRAVAGMAALVELTLPFCRVGGIVVAQKK 241
>gi|299133193|ref|ZP_07026388.1| methyltransferase GidB [Afipia sp. 1NLS2]
gi|298593330|gb|EFI53530.1| methyltransferase GidB [Afipia sp. 1NLS2]
Length = 220
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L VSRET +LE + L L+W NLV+ ST+ W RH+ DSL++
Sbjct: 1 MSDPADKAAALALMPVSRETQARLEAYVDLLLQWQAVTNLVAPSTLPTLWTRHIADSLQL 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P + DLGSGGGFPGI+ + L+ G ++L+E KKA+FLR ++ T G
Sbjct: 61 LDLAPNAKTFADLGSGGGFPGIVLACVLADRPGARIDLVERNAKKAAFLREALRITGGAG 120
Query: 126 KVFACRIQEAPQMI-TTCDVISARALADLDTLLEYSFPWLYQ 166
+V I + D ++ARALA L LL ++ P +
Sbjct: 121 EVHHRDIVDYVDSRTAPVDCVTARALAPLHQLLGFAEPLVRN 162
>gi|239631036|ref|ZP_04674067.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301065357|ref|YP_003787380.1| cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
gi|239527319|gb|EEQ66320.1| cell division SAM-dependent methyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300437764|gb|ADK17530.1| Cell division SAM-dependent methyltransferase [Lactobacillus casei
str. Zhang]
Length = 243
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ +Y + ++K+NL + D +++H DSL + + P
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQV 72
Query: 75 --WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 MSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQEAP----QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ Q + D+++ARA+A LD L E P + +
Sbjct: 130 AETFGAKKSQHRASFDLVTARAVAALDVLAELCLPLVKPQ 169
>gi|168187285|ref|ZP_02621920.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
gi|169294773|gb|EDS76906.1| methyltransferase GidB [Clostridium botulinum C str. Eklund]
Length = 243
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWI 76
+ + ++ + L W++K+NL + + E+ +H DS+++FQ + I
Sbjct: 20 LEFNDKKYDQFIQYKDLLKDWNEKVNLTAITEDEEIIKKHFIDSMKIFQFEYLRKANKII 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA 135
D+G+GGGFPGI I + + L++S K+ + L ++ + R +E
Sbjct: 80 DIGTGGGFPGIPIKIMRPDVN---MVLLDSLKKRINVLDDILTNIGINDVESIHGRAEEF 136
Query: 136 ---PQMITTCDVISARALADLDTLLEYSFPWLY 165
P+ D + +RA+A+L +L E+ P++
Sbjct: 137 AKNPKYREKFDAVVSRAVANLASLSEFCLPYVK 169
>gi|260467201|ref|ZP_05813378.1| methyltransferase GidB [Mesorhizobium opportunistum WSM2075]
gi|259029054|gb|EEW30353.1| methyltransferase GidB [Mesorhizobium opportunistum WSM2075]
Length = 208
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 66/145 (45%), Positives = 98/145 (67%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F +F KW++ INLV+ ST D W RH+ DS ++ +L P W+D+GS
Sbjct: 14 VSRETFDRLVAFEEIFQKWNRSINLVAQSTSGDVWQRHILDSAQLARLEPDAKRWVDIGS 73
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG++ + L+ +G ++L+ES KKASFL+ VV + + +V A RI E+ +++
Sbjct: 74 GGGFPGLVMAFLLAERDGASIDLVESNRKKASFLQAVVGQFSLPARVVARRIDESHALVS 133
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
T +++ARALA L TLL+ S PWL
Sbjct: 134 TPQIVTARALASLPTLLDLSAPWLT 158
>gi|241759058|ref|ZP_04757169.1| 16S rRNA methyltransferase GidB [Neisseria flavescens SK114]
gi|241320660|gb|EER56913.1| 16S rRNA methyltransferase GidB [Neisseria flavescens SK114]
Length = 209
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ KL + L KW+K NL + H+ DSL +
Sbjct: 7 LRDGIQALGLDIDDAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +D+GSGGG PGI T+I ++ + L+++ KK +FL+ V + + +V
Sbjct: 67 KHAQTMLDVGSGGGQPGIPTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ A DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAAADCR--ADVITSRAFAELADFVNWTEHLLKD 159
>gi|258517427|ref|YP_003193649.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
gi|257781132|gb|ACV65026.1| methyltransferase GidB [Desulfotomaculum acetoxidans DSM 771]
Length = 236
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L ++S + + + FY L + ++ NL + + +D +RH DSL
Sbjct: 1 MEQYLFKGAEQLDISLSLDQVRQFIKFYNLIVLGNQACNLTAITAQQDVVVRHFLDSLSC 60
Query: 66 FQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +ID+G+G GFPGI I + V LIES NKK +FL+ V++
Sbjct: 61 VKAVSFDGDLRFIDVGTGAGFPGIPLKIMYPRL---SVVLIESINKKVNFLKNTVKELGL 117
Query: 124 RGKVFAC-RIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
A R +EA D ++ARA+A L+ L EY P +
Sbjct: 118 NNIDVAQLRAEEAGTLIDFRERFDRVTARAVAQLNILAEYCLPLVK 163
>gi|241895296|ref|ZP_04782592.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
gi|241871602|gb|EER75353.1| glucose inhibited division protein B [Weissella paramesenteroides
ATCC 33313]
Length = 239
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS----IWI 76
+ + L + + +Y + ++ +NL + + +D +++H DSL + +P I
Sbjct: 17 LDDKQLAQYQTYYDRLVSVNEHMNLTAITDRDDVYLKHFYDSLTLAWAYPKLQTDQLRMI 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+G GFP + I ++ + +I++ NK+ FL+ +V + V R +E
Sbjct: 77 DVGAGAGFPSLPLKIAFPQLK---ITIIDALNKRIKFLQELVTELGLEDVTVVHARAEEF 133
Query: 136 PQM----ITTCDVISARALADLDTLLEYSFPWLY 165
DV +ARALA L+ L E + P +
Sbjct: 134 GHKKAPNREQFDVATARALARLNVLGELTLPLVK 167
>gi|163847861|ref|YP_001635905.1| 16S rRNA methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
gi|189039492|sp|A9WGI4|RSMG_CHLAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163669150|gb|ABY35516.1| methyltransferase GidB [Chloroflexus aurantiacus J-10-fl]
Length = 238
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+LR +++ L + E + + W+++ NL + RH+ DSL + +
Sbjct: 8 LLRKTTADWGLSLNDHQLAQFERYLDELMTWNERFNLTAVRDRAAMVRRHLLDSLWLARV 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
P ID+GSG GFP + I ++ V L+E+ KKA+FLR+V+ +
Sbjct: 68 WETPPDSLIDIGSGAGFPALPLKILYPALP---VTLVEATGKKATFLRHVIDCLQLHNIR 124
Query: 127 VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
V RI+ + P V++ARA+A+L LLEY+ P L
Sbjct: 125 VLNERIETVGQNPTEREHYQVVTARAVAELRVLLEYALPLLR 166
>gi|85714097|ref|ZP_01045086.1| Glucose inhibited division protein [Nitrobacter sp. Nb-311A]
gi|85699223|gb|EAQ37091.1| Glucose inhibited division protein [Nitrobacter sp. Nb-311A]
Length = 270
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 64/160 (40%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S + L VS +T +L+ F L +W K NLV+ ST+ W RH+ DSL++
Sbjct: 49 STTDKSAALALTPVSPQTEARLDAFVGLLGQWQTKTNLVAPSTLPRLWTRHIADSLQLLA 108
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P+ W DLGSGGGFPG++ + L+ IEG V+LIE KKA+FLR V+ TA+ G V
Sbjct: 109 LAPHAKRWADLGSGGGFPGVVLACALAGIEGARVDLIERNAKKAAFLREAVRITASPGIV 168
Query: 128 FACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQ 166
I + + D ++ARALA L LL ++ P + +
Sbjct: 169 HLTDIGDYVDRLEDRIDCVTARALAPLQVLLGFAEPLVKK 208
>gi|261378090|ref|ZP_05982663.1| 16S rRNA methyltransferase GidB [Neisseria cinerea ATCC 14685]
gi|269145540|gb|EEZ71958.1| 16S rRNA methyltransferase GidB [Neisseria cinerea ATCC 14685]
Length = 207
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ L++ ++S ++L + L KW+K NL + E + H+ DSL
Sbjct: 2 ERKERLQSGIAALGLDISTAAQDRLLAYVDLLKKWNKTYNLTALRDEEKMIVHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQ---ITLLDANTKKTAFLQQAVIELGLD 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + DVI++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVSDVR--ADVITSRAFAELADFVSWTGHLLKD 159
>gi|218551274|ref|YP_002385066.1| 16S rRNA methyltransferase GidB [Escherichia fergusonii ATCC 35469]
gi|226725359|sp|B7LK85|RSMG_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218358816|emb|CAQ91473.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Escherichia
fergusonii ATCC 35469]
Length = 207
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ +L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + R++ P
Sbjct: 72 VGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLDNITPVQSRVEVFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A LD +L +
Sbjct: 129 AE-PPFDGVISRAFASLDDMLNWCHHL 154
>gi|255067498|ref|ZP_05319353.1| 16S rRNA methyltransferase GidB [Neisseria sicca ATCC 29256]
gi|255048293|gb|EET43757.1| 16S rRNA methyltransferase GidB [Neisseria sicca ATCC 29256]
Length = 207
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L++ ++S E L + L KW+K NL + H+ DSL +
Sbjct: 3 PTQQLQSGIQALGLDLSAEQQTLLLAYTGLLKKWNKTYNLTALRDEAQMVSHHLLDSLTL 62
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+GSGGG PGI +I + + L+++ KK +FL+ V +
Sbjct: 63 LPYLQGAHTMLDVGSGGGQPGIPAAICRPDLN---ITLLDANTKKTAFLQQAVIELGLSN 119
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V + R++ + D+I++RA A+L + ++ L
Sbjct: 120 VRVVSGRVEAVQDL--QADIITSRAFAELADFVNWTAHLLKD 159
>gi|261213273|ref|ZP_05927555.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC341]
gi|260837547|gb|EEX64250.1| ribosomal RNA small subunit methyltransferase G [Vibrio sp. RC341]
Length = 210
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A T +VS + E+L + L KW+K NL S + ++H+ DS+ V H
Sbjct: 8 LDALISKTTLSVSEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSMVVSP-H 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I + L++S K+ FL+ V+ + +
Sbjct: 67 LNGERFIDVGTGPGLPGIPLAIMHPDKQ---FVLLDSLGKRIRFLKQVIHELKITNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A + ++ +
Sbjct: 124 QSRVEDF-DPEQGFDAVLSRAFASMTDMVNWCQHL 157
>gi|261380617|ref|ZP_05985190.1| 16S rRNA methyltransferase GidB [Neisseria subflava NJ9703]
gi|284796595|gb|EFC51942.1| 16S rRNA methyltransferase GidB [Neisseria subflava NJ9703]
Length = 209
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ KL + L KW+K NL + H+ DSL +
Sbjct: 7 LRDGIQTLGLDIDEAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +D+GSGGG PGI T+I ++ + L+++ KK +FL+ V + + +V
Sbjct: 67 EHAQTMLDVGSGGGQPGIPTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ A DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAAADCR--ADVITSRAFAELADFVNWTEHLLKD 159
>gi|295103708|emb|CBL01252.1| 16S rRNA m(7)G-527 methyltransferase [Faecalibacterium prausnitzii
SL3/3]
Length = 235
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++ L++L+ F + + +++K+NL + + E +H DSL
Sbjct: 7 LEEKCSTWNIALTGTQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSLLFASQP 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA
Sbjct: 67 EVAGRMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVDFLKYACAQLGLTGVEFA 123
Query: 130 -CRIQEAPQM--ITTCDVISARALADLDTLLEYSFPWLY 165
R +EA + D+ SARA+A L L EY P +
Sbjct: 124 KERAEEAARKVWREQFDLASARAVAALPMLAEYCLPLVK 162
>gi|213418554|ref|ZP_03351620.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 196
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 2 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 60
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 61 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 117
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 118 SEPPFDGVISRAFASLNDMVSWCHHL 143
>gi|254291138|ref|ZP_04961935.1| hypothetical protein A33_0021 [Vibrio cholerae AM-19226]
gi|150422983|gb|EDN14933.1| hypothetical protein A33_0021 [Vibrio cholerae AM-19226]
Length = 210
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + + KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQMLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I E L++S K+ FL+ V+ + +
Sbjct: 67 LVGERFIDVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHELKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + DV+ +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESGFDVVLSRAFASMTDMVNWCQHL 157
>gi|300812283|ref|ZP_07092719.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496703|gb|EFK31789.1| 16S rRNA methyltransferase GidB [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 239
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----YPS 73
+ +S ++ + ++ ++ ++ +NL + ++ +++H DS+ L P +
Sbjct: 14 NFKLSPVQEQQFKTYFKELVRVNEHVNLTRITDEDEVYLKHFYDSVTPLLLWPEVFAEGA 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
D+G+G GFP + I +E V +++S K+ +FL +++K G + R
Sbjct: 74 KLCDVGAGAGFPSLPIKILRPDLE---VTIVDSLGKRLNFLSDLLEKLGIEGVNLVHGRA 130
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSF 161
++ P D+++ARA+A + L EY
Sbjct: 131 EDVGQNPDYREKFDLVTARAVARMSVLSEYCL 162
>gi|227514197|ref|ZP_03944246.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
gi|227087429|gb|EEI22741.1| glucose inhibited division protein B [Lactobacillus fermentum ATCC
14931]
Length = 253
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R L + ++ + + +Y L ++ ++ +NL + + + +++H DSL
Sbjct: 10 NPEEFRQALLDHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLTG 69
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+P D+G+G GFP + I +E V +++S NK+ +FL +
Sbjct: 70 AFAYPKLQSQALTLCDIGAGAGFPSLPLKIAFPQLE---VTIVDSLNKRINFLADLCDDL 126
Query: 122 AARG-KVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFP 162
G + R + D+++ARA+A L L E P
Sbjct: 127 GLTGVHLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLP 172
>gi|160944277|ref|ZP_02091506.1| hypothetical protein FAEPRAM212_01786 [Faecalibacterium prausnitzii
M21/2]
gi|158444459|gb|EDP21463.1| hypothetical protein FAEPRAM212_01786 [Faecalibacterium prausnitzii
M21/2]
Length = 235
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++ L++L+ F + + +++K+NL + + E +H DSL
Sbjct: 7 LEEKCSTWNIALTGTQLDQLDAFAQILVDYNQKVNLTAITDPEGIEDKHFLDSLLFASQP 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G GFPGI+T I +E + L+E K+ FL+Y + G FA
Sbjct: 67 EVAGRMVDVGAGAGFPGIVTKIFKPELE---LTLMEPTGKRVEFLKYACAQLGLTGVEFA 123
Query: 130 -CRIQEAPQM--ITTCDVISARALADLDTLLEYSFPWLY 165
R +EA + D+ SARA+A L L EY P +
Sbjct: 124 KERAEEAARKVWREQFDLASARAVAALPMLAEYCLPLVK 162
>gi|209883523|ref|YP_002287380.1| methyltransferase GidB [Oligotropha carboxidovorans OM5]
gi|209871719|gb|ACI91515.1| methyltransferase GidB [Oligotropha carboxidovorans OM5]
Length = 229
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 60/147 (40%), Positives = 83/147 (56%), Gaps = 1/147 (0%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRETL +LE + L L+W NLV+ ST+ W RHV DSL++ L + DLGS
Sbjct: 23 VSRETLGRLEAYVDLLLQWQAVTNLVAPSTLPTLWTRHVADSLQLLDLASRAKTFADLGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI- 139
GGGFPGI+ + L+ G V+L+E KKA+FLR ++ T G+V I +
Sbjct: 83 GGGFPGIVLACALADRPGAHVDLVERNAKKAAFLREALRITGGAGEVHHRDIGDYVNSRA 142
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARALA L LL ++ P +
Sbjct: 143 APVDCVTARALAPLHQLLGFAEPLVRN 169
>gi|328541702|ref|YP_004301811.1| ribosomal RNA small subunit methyltransferase G [polymorphum gilvum
SL003B-26A1]
gi|326411454|gb|ADZ68517.1| Ribosomal RNA small subunit methyltransferase G [Polymorphum gilvum
SL003B-26A1]
Length = 236
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
L +VSRET E+L + L L+W NL++ ST+ + W RHV DSL+ P
Sbjct: 24 EALAGVASVSRETAERLRIYVDLLLRWQPAQNLIAPSTIPEIWRRHVADSLQPHLCLPEA 83
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+DLGSG GFPG++T+I L+ G V L+ES +KA+FLR +++T A G V A RI
Sbjct: 84 RRWVDLGSGAGFPGVVTAILLADKPGAHVYLVESNQRKAAFLRTALRETGAPGTVLAQRI 143
Query: 133 QEAPQMI--TTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D +SARALA L L YS +L Q
Sbjct: 144 ESVAERWSHGPVDAVSARALAPLVDLCRYSRAFLAQ 179
>gi|261341603|ref|ZP_05969461.1| hypothetical protein ENTCAN_08065 [Enterobacter cancerogenus ATCC
35316]
gi|288315954|gb|EFC54892.1| 16S rRNA methyltransferase GidB [Enterobacter cancerogenus ATCC
35316]
Length = 207
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ +++ +L + + KW+K NL S + IRH+ DS+ V
Sbjct: 4 KLSRLLDEAGISLTDHQKNQLVAYVDMLNKWNKAYNLTSVRDPNEMLIRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
+ID+G+G G PGI SI L++S K+ FLR V +
Sbjct: 64 LK-GERFIDVGTGPGLPGIPLSIVRPESH---FTLLDSLGKRIRFLRQVQHELKLENITP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++ P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEAFPAE-PPFDGVISRAFASLNDMVSWC 151
>gi|161170271|gb|ABX59241.1| predicted S-adenosylmethionine-dependent methyltransferase
[uncultured marine bacterium EB000_55B11]
gi|297183800|gb|ADI19923.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 213
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-S 73
L+ +VSRET++ L + L KW+K INLVS ST+ W RH DS +++ P
Sbjct: 10 LMCICDVSRETIQSLRVYANLLEKWNKTINLVSKSTINHMWERHFLDSAQLWPHIPENAK 69
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+GSG GF G++ +I L V LIES +K +F+R V ++T ++ RI
Sbjct: 70 TLVDIGSGAGFAGLVLAIIGKEKNPNLRVVLIESDTRKCAFMRNVSRETNINVEIITKRI 129
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+E + DV++ARALA + LL+YS L +K
Sbjct: 130 EEVDDL--KADVVTARALATVSQLLDYSKNILKKK 162
>gi|82523806|emb|CAI78549.1| hypothetical protein [uncultured Chloroflexi bacterium]
Length = 262
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ L+ L + ++W+ +INL + ++ +H DSL P +D+
Sbjct: 41 LNAAQLDALARYEQELIQWNARINLTAIRHPQEIRTKHFLDSLTCLLALRETPPERLVDV 100
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ---E 134
G+G GFPGI + ++ + L+ES KKA F R+VV+ + G +V R + +
Sbjct: 101 GTGAGFPGIPLKVIYPKMQ---LTLVESVGKKAEFCRHVVRTLSLTGVEVIQGRAETLGQ 157
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
+P+ D ARA+A L L EY P +
Sbjct: 158 SPEHREKFDWAVARAVAILPVLAEYLLPLVR 188
>gi|184154551|ref|YP_001842891.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum IFO 3956]
gi|238689197|sp|B2GF22|RSMG_LACF3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|183225895|dbj|BAG26411.1| cell division protein GidB [Lactobacillus fermentum IFO 3956]
Length = 245
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R L + ++ + + +Y L ++ ++ +NL + + + +++H DSL
Sbjct: 2 NPEEFRQALLDHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLTG 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+P D+G+G GFP + I +E V +++S NK+ +FL +
Sbjct: 62 AFAYPKLQSQALTLCDIGAGAGFPSLPLKIAFPQLE---VTIVDSLNKRINFLADLCDDL 118
Query: 122 AARGK-VFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFP 162
G + R + D+++ARA+A L L E P
Sbjct: 119 GLTGVYLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLP 164
>gi|147679250|ref|YP_001213465.1| S-adenosylmethionine-dependent methyltransferase [Pelotomaculum
thermopropionicum SI]
gi|189039870|sp|A5CY44|RSMG_PELTS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146275347|dbj|BAF61096.1| predicted S-adenosylmethionine-dependent methyltransferase
[Pelotomaculum thermopropionicum SI]
Length = 239
Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++ ++ + + + E +Y L ++ +K +NL + + + ++H DSL +
Sbjct: 6 ETIKEGAREMGIVITEKQVRQFEEYYSLIIERNKSLNLTAITGEREVAVKHFLDSLTCLK 65
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR- 124
P + +D+G+G GFPGI I S+ V L+ES KKA FLR + +
Sbjct: 66 AVPLEDGTSLMDVGTGAGFPGIPLKICRPSVR---VKLVESAEKKAVFLREAIGRLGLEM 122
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFP 162
+ R ++ P + ARA+A+L L EY P
Sbjct: 123 AEAIWARAEDVGKDPDHREKYGCVVARAVAELAVLAEYCLP 163
>gi|332363959|gb|EGJ41738.1| glucose inhibited division protein B [Streptococcus sanguinis
SK355]
Length = 237
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF---QLHPYPS 73
++ E+ E ++ L + W++KINL + + + +++H DS+ +
Sbjct: 13 QGIELTDRQKEQFERYFELLVAWNEKINLTAITEKNEVYLKHFYDSIAPVLQGLIDNQEL 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+G+G GFP + I ++ V +I+S NK+ +FL+ + ++ + + R
Sbjct: 73 KLLDIGAGAGFPSLPMKIICPQLD---VTIIDSLNKRINFLKLLAEELELDKVHFYHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+++ARA+A + L E + P+L
Sbjct: 130 EDFAQDKAFRAQFDLVTARAVARMQVLSELTIPYLK 165
>gi|269103812|ref|ZP_06156509.1| ribosomal RNA small subunit methyltransferase G [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268163710|gb|EEZ42206.1| ribosomal RNA small subunit methyltransferase G [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 206
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
V+ + L++L + L KW+K NL S + ++H+ DS+ V + +ID+
Sbjct: 14 LQVTEQQLDQLVGYVELLNKWNKAYNLTSVRDPNEMLVKHIMDSIVVSEYLK-GDHYIDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G G PGI +I L++S K+ F+R V+ + R++E Q
Sbjct: 73 GTGPGLPGIPLAIMCPE---KSFTLLDSLGKRIRFIRQVIFELKITNVTPVQSRVEEF-Q 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + ++ +
Sbjct: 129 PEEGFDGVLSRAFASMTDMVTWCHHL 154
>gi|298370291|ref|ZP_06981607.1| 16S rRNA methyltransferase GidB [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281751|gb|EFI23240.1| 16S rRNA methyltransferase GidB [Neisseria sp. oral taxon 014 str.
F0314]
Length = 207
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D+ L++ ++S +KL + + KW+K NL + H+ DSL
Sbjct: 2 DNRQKLQSGLKEMGLDLSGGQQDKLLAYVEMLKKWNKTYNLTALRDESQIISHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI ++ ++ + L+++ KK SFL+ + +
Sbjct: 62 LPPYLEGAQTMLDVGSGGGQPGIPAAVCRPDLQ---ITLLDANTKKTSFLQQAAIELELK 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+V + R++ + DVI++RA A+L + ++ L
Sbjct: 119 NVRVVSGRVEAVQGLR--ADVITSRAFAELADFVNWTAHLL 157
>gi|304392707|ref|ZP_07374647.1| 16S rRNA methyltransferase GidB [Ahrensia sp. R2A130]
gi|303295337|gb|EFL89697.1| 16S rRNA methyltransferase GidB [Ahrensia sp. R2A130]
Length = 212
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
VSRET E+L+ ++ L +KW K+INLVS ST+ D W RH DS+++ L + +D G
Sbjct: 13 GVSRETAERLQVYHDLLVKWQKQINLVSPSTIPDAWQRHFLDSMQIAPLITGGTSLVDFG 72
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-----RGKVFACRIQE 134
SG GFPG++ +I V+L+ES KKA+FLR V++ V R++
Sbjct: 73 SGAGFPGLVLAIMNVDGPLTNVHLVESNGKKAAFLRAVLRDIGLAKTGMTVTVHNERVEV 132
Query: 135 APQMITTCDVISARALADLDTLLEYSFPW 163
+ D I+ARAL+ L LL S P
Sbjct: 133 VSTTMPAPDWITARALSSLSELLTMSAPL 161
>gi|323492999|ref|ZP_08098135.1| 16S rRNA methyltransferase GidB [Vibrio brasiliensis LMG 20546]
gi|323312735|gb|EGA65863.1| 16S rRNA methyltransferase GidB [Vibrio brasiliensis LMG 20546]
Length = 210
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + VS + +L + + KW+K NL S ++ ++H+ DS+ V H
Sbjct: 8 LDALIAQTSLEVSDQQRSQLVGYVEMLDKWNKAYNLTSVRDPQEMLVKHIMDSI-VVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI SI + L++S K+ F++ V+ +
Sbjct: 67 LQGESFIDVGTGPGLPGIPLSIMNPDKQ---FVLLDSLGKRIRFIKQVLHELKIENVTPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A + ++E+
Sbjct: 124 QSRVEEYLPE-DKFDAVLSRAFASMTDMVEWCHHL 157
>gi|87122926|ref|ZP_01078791.1| glucose-inhibited division protein B [Marinomonas sp. MED121]
gi|86161799|gb|EAQ63099.1| glucose-inhibited division protein B [Marinomonas sp. MED121]
Length = 210
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 4/156 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I++ ++ T++KL + L KW+K NL + V+ H+ DSL
Sbjct: 5 EIIQKGAQTMGVDLPELTIQKLVDYLALLQKWNKAYNLTAIRDVDQMIALHLIDSLSTIP 64
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
ID+G+G G PG++ +I L++S KK FL V +
Sbjct: 65 YI-QGDKIIDVGTGPGLPGMVLAICFPE---KAFTLLDSNGKKTRFLTQVKMELGVDNVT 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A E D + +RA A L ++ ++ P
Sbjct: 121 VANERVELHAQAGQYDHVISRAFASLQDMINWTLPL 156
>gi|300087974|ref|YP_003758496.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527707|gb|ADJ26175.1| methyltransferase GidB [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 239
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRV 65
S+ L +S K + ++ ++W+ NL S + E +H D SL +
Sbjct: 6 SLFENGCLSLGVRLSESQSTKFQRYFEQLIEWNGYFNLTSITENEQVQTKHFLDSMSLII 65
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR- 124
L +D+GSG GFPGI I S++ + L+E+ +KK FL +V
Sbjct: 66 SGLEFEDKSLLDVGSGAGFPGIPLKILFPSLK---LTLLEASSKKCHFLEHVTNILELNE 122
Query: 125 GKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPW 163
KV R + P+ D+++ARALA LD L+E P+
Sbjct: 123 VKVCNERAEVQAHQPEFRENFDLVAARALASLDVLVELCLPF 164
>gi|294794211|ref|ZP_06759347.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
gi|294454541|gb|EFG22914.1| 16S rRNA methyltransferase GidB [Veillonella sp. 3_1_44]
Length = 239
Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLG 79
+ E + +Y ++ +K +NL + +++ I+H+ DSL + ++ + ID+G
Sbjct: 20 TEEQAKDFYLYYVHMIETNKYLNLTGITDMKEVVIKHMIDSLSCYNSEIIKFGMSIIDVG 79
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
+G GFPGI +I S++ V L +S K+ +FL V+ + R ++
Sbjct: 80 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLNFLESVIDELKLTNCTTLHGRAEDLSHQ 136
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 137 DYRESFDIATSRAVARLPILLEWTVPYVKE 166
>gi|238797881|ref|ZP_04641373.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
mollaretii ATCC 43969]
gi|238718297|gb|EEQ10121.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
mollaretii ATCC 43969]
Length = 206
Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ N LLN + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLNSLLNAADIELPEQQKLQLIAYVELLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVNT 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 63 HLQGRRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLSNIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A L +L +
Sbjct: 120 VQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHL 154
>gi|254788515|ref|YP_003075944.1| 16S rRNA m7G527 methyltransferase [Teredinibacter turnerae T7901]
gi|237686626|gb|ACR13890.1| 16S rRNA m7G527 methyltransferase [Teredinibacter turnerae T7901]
Length = 211
Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D L+A S + +L + LF+KW+K NL + ++ +H+ DSL
Sbjct: 3 DYLQQLQAALAHFPVEFSDDQRVRLGAYLELFIKWNKTYNLSAIRDPQEMVSKHLLDSLS 62
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V + H +ID+G+GGG PGI +I L++S KK FL V Q
Sbjct: 63 VAE-HLTGERFIDVGTGGGLPGIPLAITFPERH---FTLLDSAGKKTRFLFQVKQALGLH 118
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R E+ + D + +RA A L + +Y L
Sbjct: 119 NVQVENRRVESFEPDELYDGVISRAFASLQDMTDYCHHLLKP 160
>gi|330937307|gb|EGH41315.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. pisi str.
1704B]
Length = 214
Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 21 GIDLSPAQNEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V L++S KK F V + +V R + +
Sbjct: 80 VGSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SY 135
Query: 137 QMITTCDVISARALADLDTLLEYS 160
+ D I +RA + L+ ++
Sbjct: 136 RPEVPFDGIISRAFSSLEDFTGWT 159
>gi|229524903|ref|ZP_04414308.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
bv. albensis VL426]
gi|229338484|gb|EEO03501.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
bv. albensis VL426]
Length = 210
Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I E L++S K+ FL+ V+ + +
Sbjct: 67 LVGERFIDVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHELKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESGFDGVLSRAFASMTDMVNWCQHL 157
>gi|319639611|ref|ZP_07994358.1| ribosomal RNA small subunit methyltransferase G [Neisseria mucosa
C102]
gi|317399182|gb|EFV79856.1| ribosomal RNA small subunit methyltransferase G [Neisseria mucosa
C102]
Length = 209
Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ KL + L KW+K NL + H+ DSL +
Sbjct: 7 LRDGIQALGLDIDEAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLSYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +D+GSGGG PGI T+I ++ + L+++ KK +FL+ V + + +V
Sbjct: 67 EHAQTMLDVGSGGGQPGIPTAICRPDLD---ITLLDANTKKTAFLQQAVIELGLKNVRVI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ A T DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAAADCRT--DVITSRAFAELADFVNWTEHLLKD 159
>gi|268593522|ref|ZP_06127743.1| 16S rRNA methyltransferase GidB [Providencia rettgeri DSM 1131]
gi|291310946|gb|EFE51399.1| 16S rRNA methyltransferase GidB [Providencia rettgeri DSM 1131]
Length = 206
Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D S L + +++ + ++L + L KW+K NL S + IRH+ DS+
Sbjct: 2 DLLSKLNQLLVKTDIDLTEKQKQQLVDYVGLLAKWNKAYNLTSVRDPQQMLIRHIMDSI- 60
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V + +ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 61 VVNGQLNGTKFIDVGTGPGLPGVPLAIVRPDSH---FVLLDSLGKRIRFLKQVQHELGLT 117
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E ++ D + +RA A L+ +L +
Sbjct: 118 NIEPVQSRVEE-YRIENGFDGVISRAFASLNDMLGWCHHL 156
>gi|114769775|ref|ZP_01447385.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [alpha proteobacterium
HTCC2255]
gi|114549480|gb|EAU52362.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [alpha proteobacterium
HTCC2255]
Length = 213
Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 58/150 (38%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRET++ L + L KW+K INLVS ST+ W RH DS +++ P +D+
Sbjct: 15 DVSRETIQSLRVYANLLEKWNKTINLVSKSTINHMWERHFLDSAQLWPHIPENAKTLVDI 74
Query: 79 GSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSG GF G++ +I L V LIES +K +F+R V ++T ++ RI+E
Sbjct: 75 GSGAGFAGLVLAIIGKEKNPNLRVVLIESDTRKCAFMRNVSRETNINVEIITKRIEEVDD 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV++ARALA + LL+YS L +K
Sbjct: 135 L--KADVVTARALATVSQLLDYSKNILKKK 162
>gi|227354886|ref|ZP_03839301.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis ATCC 29906]
gi|227165039|gb|EEI49875.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis ATCC 29906]
Length = 208
Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D + L+ ++ +KL + + KW+K NL S + IRH+ DS+
Sbjct: 2 SDLLNRLKKLAKQANIELTDVQAQKLTAYVAMLDKWNKAYNLTSVRDPQQMLIRHILDSI 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V Q + +ID+G+G G PGI +I L++S K+ F++ V + A
Sbjct: 62 VVSQYL-EGNNFIDVGTGPGLPGIPLAIMRPDHH---FVLLDSLGKRVRFMKQVQHELAL 117
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E Q+ D + +RA A + +L + + ++
Sbjct: 118 HNIEPVQYRVEE-YQVEKPFDGVISRAFASMKDMLSWCSHLVTEE 161
>gi|292669231|ref|ZP_06602657.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
gi|292649072|gb|EFF67044.1| 16S rRNA methyltransferase GidB [Selenomonas noxia ATCC 43541]
Length = 240
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
IL + ++ +E+ + L + W++++NL + + ED ++H+ DSL
Sbjct: 2 TPFEEILAVHAAEAGLALTAVQIEQCAVYNRLLIAWNERMNLTALTAPEDVAVKHIIDSL 61
Query: 64 RV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+L ID+G+G G PGI ++ IE V L+++ K+ FL
Sbjct: 62 TAYDAKLFAPARTLIDVGTGAGLPGIPLAVYAPKIE---VTLMDALGKRVKFLTEAAAAM 118
Query: 122 AARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R + R +EA P+ D+ +RA+A L LLEY+ P++
Sbjct: 119 ELRNVRCIHARAEEAARRPEHRARYDIAVSRAVARLPVLLEYTLPFVR 166
>gi|197249483|ref|YP_002148810.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|226797830|sp|B5EZ06|RSMG_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|197213186|gb|ACH50583.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 207
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKTLLAAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|327485242|gb|AEA79649.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Vibrio cholerae LMA3894-4]
Length = 210
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTGLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I E L++S K+ FL+ V+ +
Sbjct: 67 LVGERFIDVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESGFDGVLSRAFASMTDMVNWCQHL 157
>gi|289826267|ref|ZP_06545379.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
Length = 207
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|327384225|gb|AEA55699.1| 16S rRNA methyltransferase GidB [Lactobacillus casei BD-II]
Length = 243
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ +Y + ++K+NL + D +++H DSL + + P
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQV 72
Query: 75 --WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 MSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D+++ARA+A LD L E P + +
Sbjct: 130 AETFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQ 169
>gi|323496916|ref|ZP_08101944.1| 16S rRNA methyltransferase GidB [Vibrio sinaloensis DSM 21326]
gi|323317990|gb|EGA70973.1| 16S rRNA methyltransferase GidB [Vibrio sinaloensis DSM 21326]
Length = 210
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S L A +VS + E L + + KW+K NL S +D ++H+ DS+ +
Sbjct: 5 RSKLDALIAQTDLDVSDKQRELLVGYVAMLDKWNKAYNLTSVRDPQDMLVKHILDSI-IV 63
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H +ID+G+G G PGI +I E L++S K+ F++ + +
Sbjct: 64 STHLQGERFIDVGTGPGLPGIPLAIMCPDKE---FFLLDSLGKRIRFIKQALHELKIENV 120
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E Q D + +RA A + ++ + Q
Sbjct: 121 TPIQSRVEEF-QPEEKFDAVLSRAFASMVDMVNWCHHLPKQ 160
>gi|116493781|ref|YP_805515.1| 16S rRNA methyltransferase GidB [Lactobacillus casei ATCC 334]
gi|122264764|sp|Q03CJ9|RSMG_LACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116103931|gb|ABJ69073.1| 16S rRNA m(7)G-527 methyltransferase [Lactobacillus casei ATCC 334]
Length = 243
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-- 74
+ ++ ++ +Y + ++K+NL + D +++H DSL + + P
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLALVLPELQTQV 72
Query: 75 --WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 MSVCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D+++ARA+A LD L E P + +
Sbjct: 130 AEAFGAKKSPHRASFDLVTARAVAALDVLAELCLPLVKPQ 169
>gi|256060024|ref|ZP_05450206.1| 16S rRNA methyltransferase GidB [Brucella neotomae 5K33]
gi|261324001|ref|ZP_05963198.1| ribosomal RNA small subunit methyltransferase G [Brucella neotomae
5K33]
gi|261299981|gb|EEY03478.1| ribosomal RNA small subunit methyltransferase G [Brucella neotomae
5K33]
Length = 213
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|197286881|ref|YP_002152753.1| glucose-inhibited division protein B [Proteus mirabilis HI4320]
gi|194684368|emb|CAR46007.1| methyltransferase (glucose-inhibited division protein B) [Proteus
mirabilis HI4320]
Length = 208
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D + L+ ++ +KL + + KW+K NL S + IRH+ DS+
Sbjct: 2 SDLLNRLKKLAKQANIELTDVQAQKLTAYVAMLDKWNKAYNLTSVRDPQQMLIRHILDSI 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V Q + +ID+G+G G PGI +I L++S K+ F++ V + A
Sbjct: 62 VVSQYLKGNN-FIDVGTGPGLPGIPLAIMRPDHH---FVLLDSLGKRVRFMKQVQHELAL 117
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E Q+ D + +RA A + +L + + ++
Sbjct: 118 HNIEPVQYRVEE-YQVEKPFDGVISRAFASMKDMLSWCSHLVTEE 161
>gi|308051497|ref|YP_003915063.1| 16S rRNA m(7)G-527 methyltransferase [Ferrimonas balearica DSM
9799]
gi|307633687|gb|ADN77989.1| 16S rRNA m(7)G-527 methyltransferase [Ferrimonas balearica DSM
9799]
Length = 207
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R + L+N VS E +L + KW+K NL S D +H+ DS+ V
Sbjct: 5 RLSTLINDSGLTVSAEQQAQLVELVRMLDKWNKAYNLTSVRDPMDMLEKHILDSIVVGP- 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H +ID+G+G G PG+ +I E L++S K+ F+R V+
Sbjct: 64 HLQGRRFIDVGTGPGLPGLPLAICNPDKE---FVLLDSLGKRIRFIRQVIHSLGLTNVTA 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q DV+ +RA A L+ +L +
Sbjct: 121 VESRVEAYQPDPGFDVVLSRAFASLEDMLTWCAHL 155
>gi|154251728|ref|YP_001412552.1| methyltransferase GidB [Parvibaculum lavamentivorans DS-1]
gi|189045873|sp|A7HSL2|RSMG_PARL1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154155678|gb|ABS62895.1| methyltransferase GidB [Parvibaculum lavamentivorans DS-1]
Length = 226
Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats.
Identities = 64/158 (40%), Positives = 91/158 (57%), Gaps = 1/158 (0%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ + NVSRETL++L + L KW K INLVS+ ++ + W RH+ DS ++
Sbjct: 10 PQVVDSESFSALTNVSRETLDRLLSYEALLRKWQKSINLVSNGSLPELWRRHMLDSAQLV 69
Query: 67 QLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P + WIDLGSGGGFPG++ +I L G ++L+ES +K F+R V + T A
Sbjct: 70 CLVPESARRWIDLGSGGGFPGLVIAILLRERPGFQMHLVESDQRKCVFMREVARVTGAPA 129
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
V RI+ Q DV+SARALA LD L ++ P
Sbjct: 130 TVHTVRIEAFAQGAEAGDVVSARALAPLDRLFGWAAPL 167
>gi|254694682|ref|ZP_05156510.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 3 str. Tulya]
gi|261215010|ref|ZP_05929291.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 3 str. Tulya]
gi|260916617|gb|EEX83478.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 3 str. Tulya]
Length = 213
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKATFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|205354544|ref|YP_002228345.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205274325|emb|CAR39349.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326629679|gb|EGE36022.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 209
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|168234384|ref|ZP_02659442.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194469918|ref|ZP_03075902.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194456282|gb|EDX45121.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205331682|gb|EDZ18446.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 207
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|15642767|ref|NP_232400.1| 16S rRNA methyltransferase GidB [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|153820110|ref|ZP_01972777.1| hypothetical protein A5C_0004 [Vibrio cholerae NCTC 8457]
gi|153821960|ref|ZP_01974627.1| hypothetical protein A5E_0009 [Vibrio cholerae B33]
gi|227082886|ref|YP_002811437.1| glucose inhibited division protein B [Vibrio cholerae M66-2]
gi|229508287|ref|ZP_04397791.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae BX
330286]
gi|229508639|ref|ZP_04398134.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
B33]
gi|229517145|ref|ZP_04406591.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC9]
gi|229606561|ref|YP_002877209.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MJ-1236]
gi|254851565|ref|ZP_05240915.1| glucose-inhibited division protein B [Vibrio cholerae MO10]
gi|255746816|ref|ZP_05420762.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholera
CIRS 101]
gi|262155896|ref|ZP_06029018.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
INDRE 91/1]
gi|298501186|ref|ZP_07010985.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MAK 757]
gi|20177906|sp|Q9KNG5|RSMG_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766911|sp|C3LSJ9|RSMG_VIBCM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|9657376|gb|AAF95913.1| glucose inhibited division protein B [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|126509341|gb|EAZ71935.1| hypothetical protein A5C_0004 [Vibrio cholerae NCTC 8457]
gi|126520499|gb|EAZ77722.1| hypothetical protein A5E_0009 [Vibrio cholerae B33]
gi|227010774|gb|ACP06986.1| glucose inhibited division protein B [Vibrio cholerae M66-2]
gi|229346208|gb|EEO11180.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC9]
gi|229354353|gb|EEO19281.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
B33]
gi|229354560|gb|EEO19482.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae BX
330286]
gi|229369216|gb|ACQ59639.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
MJ-1236]
gi|254847270|gb|EET25684.1| glucose-inhibited division protein B [Vibrio cholerae MO10]
gi|255735573|gb|EET90972.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholera
CIRS 101]
gi|262030348|gb|EEY48990.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
INDRE 91/1]
gi|297540058|gb|EFH76120.1| 16S rRNA methyltransferase GidB [Vibrio cholerae MAK 757]
Length = 210
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+GSG G PGI +I E LI+S K+ FL+ V+ +
Sbjct: 67 LVGERFIDVGSGPGLPGIPLAIMHPDKE---FVLIDSLGKRIRFLKQVIHDLKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESGFDGVLSRAFASMTDMVNWCQHL 157
>gi|207859096|ref|YP_002245747.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|213026622|ref|ZP_03341069.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
gi|213579758|ref|ZP_03361584.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|224585668|ref|YP_002639467.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|206710899|emb|CAR35263.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224470196|gb|ACN48026.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|267996161|gb|ACY91046.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160405|emb|CBW19931.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|320088298|emb|CBY98059.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|323132235|gb|ADX19665.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
Length = 209
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|17986292|ref|NP_538926.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 1 str.
16M]
gi|62290904|ref|YP_222697.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 1 str. 9-941]
gi|82700815|ref|YP_415389.1| 16S rRNA methyltransferase GidB [Brucella melitensis biovar Abortus
2308]
gi|161619974|ref|YP_001593861.1| glucose-inhibited division protein B [Brucella canis ATCC 23365]
gi|163844078|ref|YP_001628482.1| glucose-inhibited division protein B [Brucella suis ATCC 23445]
gi|189025117|ref|YP_001935885.1| 16S rRNA methyltransferase GidB [Brucella abortus S19]
gi|225853491|ref|YP_002733724.1| 16S rRNA methyltransferase GidB [Brucella melitensis ATCC 23457]
gi|254696309|ref|ZP_05158137.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 2 str.
86/8/59]
gi|254705061|ref|ZP_05166889.1| 16S rRNA methyltransferase GidB [Brucella suis bv. 3 str. 686]
gi|254707421|ref|ZP_05169249.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis M163/99/10]
gi|254709037|ref|ZP_05170848.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis B2/94]
gi|254731225|ref|ZP_05189803.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 4 str. 292]
gi|256030562|ref|ZP_05444176.1| 16S rRNA methyltransferase GidB [Brucella pinnipedialis M292/94/1]
gi|256112384|ref|ZP_05453305.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 3 str.
Ether]
gi|256158558|ref|ZP_05456448.1| 16S rRNA methyltransferase GidB [Brucella ceti M490/95/1]
gi|256253967|ref|ZP_05459503.1| 16S rRNA methyltransferase GidB [Brucella ceti B1/94]
gi|256263029|ref|ZP_05465561.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 2 str. 63/9]
gi|256370458|ref|YP_003107969.1| glucose-inhibited division protein B [Brucella microti CCM 4915]
gi|260546165|ref|ZP_05821905.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
NCTC 8038]
gi|260562964|ref|ZP_05833450.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. 16M]
gi|260567470|ref|ZP_05837940.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
4 str. 40]
gi|260758957|ref|ZP_05871305.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 4 str. 292]
gi|260760680|ref|ZP_05873023.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 2 str. 86/8/59]
gi|261221109|ref|ZP_05935390.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
B1/94]
gi|261314906|ref|ZP_05954103.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M163/99/10]
gi|261316536|ref|ZP_05955733.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis B2/94]
gi|261755764|ref|ZP_05999473.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
3 str. 686]
gi|265987610|ref|ZP_06100167.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M292/94/1]
gi|265993819|ref|ZP_06106376.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 3 str. Ether]
gi|265997070|ref|ZP_06109627.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M490/95/1]
gi|294851289|ref|ZP_06791962.1| 16S rRNA methyltransferase GidB [Brucella sp. NVSL 07-0026]
gi|20177888|sp|Q8YJS4|RSMG_BRUME RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75496087|sp|Q57AJ8|RSMG_BRUAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123547325|sp|Q2YR13|RSMG_BRUA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039486|sp|A9M9E3|RSMG_BRUC2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039487|sp|B0CJG0|RSMG_BRUSI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238689412|sp|B2S959|RSMG_BRUA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766885|sp|C0RFU8|RSMG_BRUMB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17981874|gb|AAL51190.1| glucose inhibited division protein b [Brucella melitensis bv. 1
str. 16M]
gi|62197036|gb|AAX75336.1| GidB, glucose-inhibited division protein B [Brucella abortus bv. 1
str. 9-941]
gi|82616916|emb|CAJ12017.1| Glucose inhibited division protein [Brucella melitensis biovar
Abortus 2308]
gi|161336785|gb|ABX63090.1| methyltransferase GidB [Brucella canis ATCC 23365]
gi|163674801|gb|ABY38912.1| methyltransferase GidB [Brucella suis ATCC 23445]
gi|189020689|gb|ACD73411.1| Glucose inhibited division protein [Brucella abortus S19]
gi|225641856|gb|ACO01770.1| methyltransferase GidB [Brucella melitensis ATCC 23457]
gi|256000621|gb|ACU49020.1| glucose-inhibited division protein B [Brucella microti CCM 4915]
gi|260096272|gb|EEW80148.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
NCTC 8038]
gi|260152980|gb|EEW88072.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. 16M]
gi|260156988|gb|EEW92068.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
4 str. 40]
gi|260669275|gb|EEX56215.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 4 str. 292]
gi|260671112|gb|EEX57933.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 2 str. 86/8/59]
gi|260919693|gb|EEX86346.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
B1/94]
gi|261295759|gb|EEX99255.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis B2/94]
gi|261303932|gb|EEY07429.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M163/99/10]
gi|261745517|gb|EEY33443.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
3 str. 686]
gi|262551538|gb|EEZ07528.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M490/95/1]
gi|262764800|gb|EEZ10721.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 3 str. Ether]
gi|263092902|gb|EEZ17077.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 2 str. 63/9]
gi|264659807|gb|EEZ30068.1| ribosomal RNA small subunit methyltransferase G [Brucella
pinnipedialis M292/94/1]
gi|294819878|gb|EFG36877.1| 16S rRNA methyltransferase GidB [Brucella sp. NVSL 07-0026]
gi|326410055|gb|ADZ67120.1| Glucose inhibited division protein [Brucella melitensis M28]
gi|326539772|gb|ADZ87987.1| methyltransferase GidB [Brucella melitensis M5-90]
Length = 213
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|153829675|ref|ZP_01982342.1| hypothetical protein A59_0021 [Vibrio cholerae 623-39]
gi|148874851|gb|EDL72986.1| hypothetical protein A59_0021 [Vibrio cholerae 623-39]
Length = 210
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I E L++S K+ FL+ V+ +
Sbjct: 67 LVGERFIDVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E ++ D + +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESSFDGVLSRAFASMTDMVNWCQHL 157
>gi|86747516|ref|YP_484012.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris HaA2]
gi|123004743|sp|Q2J359|RSMG_RHOP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86570544|gb|ABD05101.1| methyltransferase GidB [Rhodopseudomonas palustris HaA2]
Length = 237
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VSRET +L+ + L W K NLV+ ST+ W RHV DSL++ L P W
Sbjct: 22 LRLTPVSRETETRLDAYLDLLRLWQAKTNLVAPSTLPQLWTRHVADSLQLLALAPTARRW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPGI+ + ++ +GG V L+E KKA+FLR ++ T A G V I +
Sbjct: 82 LDFGSGGGFPGIVLACAMAEHDGGHVTLVERNAKKAAFLREALRVTGAPGTVMLADIGDN 141
Query: 136 PQMITTC-DVISARALADLDTLLEYSFPWLYQ 166
D I+ARA+A L L+ ++ P + +
Sbjct: 142 VDRFPRALDCITARAVAPLHQLIGFAAPLMTE 173
>gi|22128011|ref|NP_671434.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM 10]
gi|45443759|ref|NP_995298.1| 16S rRNA methyltransferase GidB [Yersinia pestis biovar Microtus
str. 91001]
gi|21961159|gb|AAM87685.1|AE014015_10 glucose-inhibited division protein [Yersinia pestis KIM 10]
gi|45438629|gb|AAS64175.1| glucose inhibited division protein B [Yersinia pestis biovar
Microtus str. 91001]
Length = 223
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + + +L + L KW+K NL S + +RH+ DS+ V H
Sbjct: 22 LDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPH 80
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 81 LQGSRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLNNIEPV 137
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L +L +
Sbjct: 138 QSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHL 171
>gi|156936120|ref|YP_001440036.1| 16S rRNA methyltransferase GidB [Cronobacter sakazakii ATCC
BAA-894]
gi|166224587|sp|A7MMW2|RSMG_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|156534374|gb|ABU79200.1| hypothetical protein ESA_04014 [Cronobacter sakazakii ATCC BAA-894]
Length = 207
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +L + + KW+K NL S + +RH+ DS+ V + H + +ID
Sbjct: 13 GITLPEHQKAQLVAYVDMLNKWNKAYNLTSVRDPNEMLVRHIMDSI-VVEPHLKGTRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI +I L++S K+ FLR V + R++ P
Sbjct: 72 VGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELKLDNITPVQSRVEAFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 129 AE-PPFDGVISRAFASLSDMVNWCHHL 154
>gi|16762453|ref|NP_458070.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29143941|ref|NP_807283.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56415741|ref|YP_152816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62182356|ref|YP_218773.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161616996|ref|YP_001590961.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167994880|ref|ZP_02575970.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168245183|ref|ZP_02670115.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168823140|ref|ZP_02835140.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194443339|ref|YP_002043121.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448458|ref|YP_002047904.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261829|ref|ZP_03161903.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197364669|ref|YP_002144306.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|198243877|ref|YP_002217821.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200388761|ref|ZP_03215373.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|213052662|ref|ZP_03345540.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213649866|ref|ZP_03379919.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213850448|ref|ZP_03381346.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|308065943|ref|NP_462772.3| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|54037193|sp|P64238|RSMG_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54041309|sp|P64237|RSMG_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75479636|sp|Q57HX0|RSMG_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81599662|sp|Q5PJX2|RSMG_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040821|sp|A9MXB7|RSMG_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226797831|sp|B5FN43|RSMG_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238690239|sp|B4TAY2|RSMG_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238690765|sp|B5BIP4|RSMG_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238693555|sp|B4SYE1|RSMG_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|25300022|pir||AF0953 glucose inhibited division protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16422447|gb|AAL22731.1| associated with glucose-inhibited division [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16504758|emb|CAD03122.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139577|gb|AAO71143.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56129998|gb|AAV79504.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129989|gb|AAX67692.1| associate with glucose-inhibited division [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161366360|gb|ABX70128.1| hypothetical protein SPAB_04817 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402002|gb|ACF62224.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406762|gb|ACF66981.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197096146|emb|CAR61742.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197240084|gb|EDY22704.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197938393|gb|ACH75726.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199605859|gb|EDZ04404.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205327328|gb|EDZ14092.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205336052|gb|EDZ22816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205340562|gb|EDZ27326.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|261249012|emb|CBG26870.1| glucose inhibited division protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|312915004|dbj|BAJ38978.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321222171|gb|EFX47244.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322716850|gb|EFZ08421.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|326625608|gb|EGE31953.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|332990722|gb|AEF09705.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 207
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|238913126|ref|ZP_04656963.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|322617214|gb|EFY14119.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619098|gb|EFY15984.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625165|gb|EFY21993.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322634359|gb|EFY31093.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635243|gb|EFY31958.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642880|gb|EFY39465.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645084|gb|EFY41614.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650433|gb|EFY46845.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653625|gb|EFY49952.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661547|gb|EFY57770.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322661629|gb|EFY57848.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669791|gb|EFY65933.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671984|gb|EFY68103.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675005|gb|EFY71091.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322683695|gb|EFY79708.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686082|gb|EFY82067.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192001|gb|EFZ77238.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323202724|gb|EFZ87761.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208301|gb|EFZ93242.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211736|gb|EFZ96569.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218598|gb|EGA03305.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323224770|gb|EGA09035.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323232522|gb|EGA16624.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323235297|gb|EGA19382.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323241085|gb|EGA25122.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241366|gb|EGA25398.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248596|gb|EGA32526.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252105|gb|EGA35965.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258591|gb|EGA42254.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323268214|gb|EGA51690.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270628|gb|EGA54073.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 209
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|146309630|ref|YP_001190095.1| glucose-inhibited division protein B [Pseudomonas mendocina ymp]
gi|189040709|sp|A4Y197|RSMG_PSEMY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145577831|gb|ABP87363.1| 16S rRNA m(7)G-527 methyltransferase [Pseudomonas mendocina ymp]
Length = 214
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWI 76
+S E+L + L +KW+K NL + ++ RH+ DSL V W+
Sbjct: 19 GIELSERQQEQLLAYLGLLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAERGDNWL 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSGGG PGI +I L++S KK FL V + +V R++
Sbjct: 79 DVGSGGGMPGIPLAIMFPERR---FTLLDSNGKKTRFLVQVKLELKLANLEVVHSRVE-T 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
+ D IS+RA + L +++
Sbjct: 135 YRPEQPFDGISSRAFSSLQDFSDWTRHL 162
>gi|170026422|ref|YP_001722927.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis YPIII]
gi|238688495|sp|B1JR33|RSMG_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169752956|gb|ACA70474.1| methyltransferase GidB [Yersinia pseudotuberculosis YPIII]
Length = 206
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + + +L + L KW+K NL S + +RH+ DS+ V H
Sbjct: 5 LDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LQGSRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLNNIELV 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L +L +
Sbjct: 121 QSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHL 154
>gi|32034341|ref|ZP_00134541.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209118|ref|YP_001054343.1| 16S rRNA methyltransferase GidB [Actinobacillus pleuropneumoniae
L20]
gi|166224341|sp|A3N2V2|RSMG_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126097910|gb|ABN74738.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 205
Score = 167 bits (423), Expect = 5e-40, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL N++ + E+L F L KW+K NL S ++ ++H+ DSL V +
Sbjct: 4 KLDRLLEQAQINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSLVVSE- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H + +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 63 HLQGNNFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + T D + +RA A L+ ++++ +
Sbjct: 120 VLSRVEEYKE--QTFDGVLSRAFASLNDMVDWCYHL 153
>gi|254690192|ref|ZP_05153446.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 6 str. 870]
gi|256258446|ref|ZP_05463982.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 9 str. C68]
gi|260755733|ref|ZP_05868081.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 6 str. 870]
gi|260884759|ref|ZP_05896373.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 9 str. C68]
gi|297247288|ref|ZP_06931006.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 5 str. B3196]
gi|260675841|gb|EEX62662.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 6 str. 870]
gi|260874287|gb|EEX81356.1| ribosomal RNA small subunit methyltransferase G [Brucella abortus
bv. 9 str. C68]
gi|297174457|gb|EFH33804.1| 16S rRNA methyltransferase GidB [Brucella abortus bv. 5 str. B3196]
Length = 213
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|282848773|ref|ZP_06258168.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
gi|282581559|gb|EFB86947.1| 16S rRNA methyltransferase GidB [Veillonella parvula ATCC 17745]
Length = 250
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLG 79
+ E + +Y ++ +K +NL + +++ ++H+ DSL + ++ ID+G
Sbjct: 31 TEEQAKDFYMYYAHMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSEIIKSGMTIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
+G GFPGI +I S++ V L +S K+ +FL ++ K R ++
Sbjct: 91 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESIIDKLKLTNCTTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKE 177
>gi|213427462|ref|ZP_03360212.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 216
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 74 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 130
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 131 SEPPFDGVISRAFASLNDMVSWCHHL 156
>gi|204928642|ref|ZP_03219841.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|204322075|gb|EDZ07273.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322630216|gb|EFY26987.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|323200495|gb|EFZ85573.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323219999|gb|EGA04469.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323262377|gb|EGA45935.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
Length = 207
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|59713181|ref|YP_205957.1| glucose-inhibited division protein B [Vibrio fischeri ES114]
gi|197334215|ref|YP_002157361.1| 16S rRNA methyltransferase GidB [Vibrio fischeri MJ11]
gi|75431404|sp|Q5E1M7|RSMG_VIBF1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|59481282|gb|AAW87069.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Vibrio fischeri
ES114]
gi|197315705|gb|ACH65152.1| 16S rRNA methyltransferase GidB [Vibrio fischeri MJ11]
Length = 210
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
NVS E+L + L KW+K NL S + I+H+ DS+ V +ID+
Sbjct: 17 LNVSELQKEQLLGYVALLHKWNKAYNLTSVRNPSEMVIKHILDSIVVSP-KLSGERFIDV 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G G PGI +I L++S K+ F++ V+ + R++E Q
Sbjct: 76 GTGPGLPGIPLAIMNPE---KSFTLLDSLGKRIRFIKQVIHELKITNVTPIQSRVEEF-Q 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A + ++ + ++
Sbjct: 132 PEEKFDAVLSRAFASMTDMVNWCHHLPKEE 161
>gi|85712597|ref|ZP_01043644.1| glucose-inhibited division protein B [Idiomarina baltica OS145]
gi|85693588|gb|EAQ31539.1| glucose-inhibited division protein B [Idiomarina baltica OS145]
Length = 215
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS E + KL L KW+K NL S + +H+ DSL V +ID+G+
Sbjct: 22 VSDEQVVKLVQLVELLDKWNKAYNLTSVRDPNEMLTKHIIDSLVVMPHLKGEQ-FIDVGT 80
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMI 139
G G PG+ +I + E L++S K+ F+R V + R++ +
Sbjct: 81 GPGLPGLPLAICMPHCE---FVLLDSLGKRIRFIRQVCHELNIENVTAVQSRVEAYDSRL 137
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ +L +
Sbjct: 138 HDFDGVLSRAFASLNDMLSWCHHL 161
>gi|300721122|ref|YP_003710390.1| glucose-inhibited division protein [Xenorhabdus nematophila ATCC
19061]
gi|297627607|emb|CBJ88126.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Xenorhabdus nematophila ATCC 19061]
Length = 206
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +S+E ++L + + KW+K NL S E +RH+ DS+ V
Sbjct: 5 LESLLAKTDIALSQEQKQQLVAYVEMLNKWNKAYNLTSVRDPEQMLVRHIMDSIVVNPFL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ + +ID+G+G G PG+ +I + L++S K+ FLR V +
Sbjct: 65 -HGTRFIDVGTGPGLPGVPLAIVR---QDSHFTLLDSLGKRVRFLRQVQHELGLTNIDPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A L +L +
Sbjct: 121 QSRVEEFIPE-PPFDGVISRAFASLQDMLSWCRHL 154
>gi|259502035|ref|ZP_05744937.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
gi|259169999|gb|EEW54494.1| 16S rRNA methyltransferase GidB [Lactobacillus antri DSM 16041]
Length = 241
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + N+S + +++ +Y + ++++NL + D +++H DSL
Sbjct: 2 NPEQFQQALAERGINLSDQQMQQFADYYRQLVATNRQVNLTRITEENDVYLKHFYDSLTG 61
Query: 66 F----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+L D+G+G GFP + I ++ V +++S NK+ SFL+ +V +
Sbjct: 62 ALAEPRLQTEQLTLCDIGAGAGFPSLPLKIAFPQLK---VTIVDSLNKRISFLQALVAQL 118
Query: 122 AARGKV-FACRIQ----EAPQMITTCDVISARALADLDTLLEYSFP 162
G R + + D++ ARA+A L L E P
Sbjct: 119 GLTGVTLVHDRAETFSAKQSPHREQYDLVLARAVARLSVLSELCLP 164
>gi|320539762|ref|ZP_08039423.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Serratia
symbiotica str. Tucson]
gi|320030165|gb|EFW12183.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Serratia
symbiotica str. Tucson]
Length = 206
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ + + ++L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLDSLLSAAGIELPEQQKQQLLGYIVMLEKWNKAYNLTSVRDAQQMLVRHILDSI-VVNS 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H S +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 63 HLQGSRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLHNIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A L +L +
Sbjct: 120 VHSRVEEFMAE-PPFDGVISRAFASLQDMLSWCHHL 154
>gi|168239644|ref|ZP_02664702.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|194734008|ref|YP_002116816.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|238690702|sp|B4TN41|RSMG_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194709510|gb|ACF88731.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197287674|gb|EDY27065.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
Length = 207
Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHQL 154
>gi|225626439|ref|ZP_03784478.1| methyltransferase GidB [Brucella ceti str. Cudo]
gi|260169467|ref|ZP_05756278.1| 16S rRNA methyltransferase GidB [Brucella sp. F5/99]
gi|261758994|ref|ZP_06002703.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
F5/99]
gi|225618096|gb|EEH15139.1| methyltransferase GidB [Brucella ceti str. Cudo]
gi|261738978|gb|EEY26974.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
F5/99]
Length = 213
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|289422527|ref|ZP_06424370.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
gi|289157099|gb|EFD05721.1| 16S rRNA methyltransferase GidB [Peptostreptococcus anaerobius
653-L]
Length = 240
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++ +LR + L++ E + + + +++ +NL + + +I+H DS+
Sbjct: 4 ENIKLLRDGLKNYKIDCDDIMLDRFETYREILVDFNQHMNLTGITDQREVYIKHFLDSVA 63
Query: 65 VFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+F+ ID+G+G GFPG+ I IE + L++S NK+ +FL+ V +
Sbjct: 64 IFKHGYLTGDLSVIDVGTGAGFPGLPFKIANPDIE---LTLLDSLNKRINFLKEVGRGIG 120
Query: 123 ARGKV-FACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R +E Q D+ +ARA+A+L LLE P++
Sbjct: 121 FDDIDYVHGRAEEIGQNKDYRQKFDIATARAVANLPVLLELCVPFVK 167
>gi|303228589|ref|ZP_07315416.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
gi|302516768|gb|EFL58683.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-134-V-Col7a]
Length = 249
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLG 79
+++ + +Y ++ +K +NL + +++ ++H+ DSL + + S ID+G
Sbjct: 31 TQQQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDPTIIKSGSSIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
+G GFPGI +I ++ V L +S K+ +FL V+ + K R ++
Sbjct: 91 TGAGFPGIPLAIYDRTLH---VTLFDSLKKRLTFLESVIDELQLTNCKTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ Q
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKQ 177
>gi|225076865|ref|ZP_03720064.1| hypothetical protein NEIFLAOT_01916 [Neisseria flavescens
NRL30031/H210]
gi|224951810|gb|EEG33019.1| hypothetical protein NEIFLAOT_01916 [Neisseria flavescens
NRL30031/H210]
Length = 209
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++ KL + L KW+K NL + H+ DSL +
Sbjct: 7 LRDGVQALGLDIDDAKQAKLLDYAALLQKWNKTYNLTALRDPAQTVSHHLLDSLTLLPYI 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +D+GSGGG PGI T+I ++ + L+++ KK +FL+ V + + +V
Sbjct: 67 EHAQTMLDVGSGGGQPGIPTAICRPDLD---ITLLDANTKKTAFLQQAVIELDLKNVRVI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ A DVI++RA A+L + ++ L
Sbjct: 124 SGRVEAAADCR--ADVITSRAFAELADFVNWTEHLLKD 159
>gi|165977090|ref|YP_001652683.1| 16S rRNA methyltransferase GidB [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150985|ref|YP_001969510.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303249897|ref|ZP_07336099.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307250949|ref|ZP_07532875.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307253321|ref|ZP_07535193.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307257736|ref|ZP_07539493.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307262143|ref|ZP_07543794.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307264342|ref|ZP_07545930.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|193806478|sp|B0BRY0|RSMG_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226795817|sp|B3H2Q1|RSMG_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|165877191|gb|ABY70239.1| glucose inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189916116|gb|ACE62368.1| methyltransferase GidB [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302650960|gb|EFL81114.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306856977|gb|EFM89107.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306859185|gb|EFM91226.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306863642|gb|EFM95568.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306868120|gb|EFM99945.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870294|gb|EFN02050.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 205
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL N++ + E+L F L KW+K NL S ++ ++H+ DSL V +
Sbjct: 4 KLDRLLEQAQINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSLVVSE- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H + +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 63 HLQGNNFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + T D + +RA A L+ ++++ +
Sbjct: 120 VLSRVEEYKE--QTFDGVLSRAFASLNDMVDWCYHL 153
>gi|153212978|ref|ZP_01948572.1| hypothetical protein A55_0019 [Vibrio cholerae 1587]
gi|153803601|ref|ZP_01958187.1| hypothetical protein A51_B2828 [Vibrio cholerae MZO-3]
gi|229515959|ref|ZP_04405416.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
TMA 21]
gi|229520163|ref|ZP_04409590.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae TM
11079-80]
gi|297581980|ref|ZP_06943900.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|124116204|gb|EAY35024.1| hypothetical protein A55_0019 [Vibrio cholerae 1587]
gi|124120866|gb|EAY39609.1| hypothetical protein A51_B2828 [Vibrio cholerae MZO-3]
gi|229342757|gb|EEO07748.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae TM
11079-80]
gi|229347059|gb|EEO12021.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
TMA 21]
gi|297533847|gb|EFH72688.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 210
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I E L++S K+ FL+ V+ +
Sbjct: 67 LVGERFIDVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESGFDGVLSRAFASMTDMVNWCQHL 157
>gi|238787870|ref|ZP_04631667.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
frederiksenii ATCC 33641]
gi|238724213|gb|EEQ15856.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
frederiksenii ATCC 33641]
Length = 209
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 11 RANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL + + + +L + L KW+K NL S +RH+ DS+ V
Sbjct: 7 KLDSLLKAADIALPDQQKHQLIGYVELLHKWNKAYNLTSVRDPMQMLVRHILDSI-VVNP 65
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H + +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 66 HLQGNRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLSNIEP 122
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A L +L +
Sbjct: 123 VQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHL 157
>gi|317494635|ref|ZP_07953047.1| glucose inhibited division protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917237|gb|EFV38584.1| glucose inhibited division protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 206
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 4/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ + ++L + L KW+K NL S ++ +RH+ DS+ V + +ID
Sbjct: 13 GISLTDQQKQQLLGYVGLLDKWNKAYNLTSVRDPKEMLVRHILDSIVVNPFL-QGNRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVRPESH---FTLLDSLGKRVRFLRQVQHELKLTNIEPVQSRVEAFL 128
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A L +L + +
Sbjct: 129 PEPPFDGVISRAFASLQDMLSWCHHLPKPE 158
>gi|254718102|ref|ZP_05179913.1| 16S rRNA methyltransferase GidB [Brucella sp. 83/13]
gi|265983055|ref|ZP_06095790.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
83/13]
gi|306839727|ref|ZP_07472529.1| methyltransferase GidB [Brucella sp. NF 2653]
gi|264661647|gb|EEZ31908.1| ribosomal RNA small subunit methyltransferase G [Brucella sp.
83/13]
gi|306405187|gb|EFM61464.1| methyltransferase GidB [Brucella sp. NF 2653]
Length = 213
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 89/146 (60%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLITFEDLFRKWSKAINLASPSTLSDLWNRHILDSAQLFPLAKDATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ G ++L+ES KKA+FLR +V A RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPDGCIDLVESAGKKAAFLRTASGHLHVPARVHAARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|148559599|ref|YP_001259865.1| 16S rRNA methyltransferase GidB [Brucella ovis ATCC 25840]
gi|166224577|sp|A5VT18|RSMG_BRUO2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148370856|gb|ABQ60835.1| methyltransferase GidB [Brucella ovis ATCC 25840]
Length = 213
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 91/146 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS+++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSVQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|37524080|ref|NP_927424.1| glucose-inhibited division protein B [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|55976478|sp|Q7NA87|RSMG_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|36783503|emb|CAE12343.1| Glucose inhibited division protein B [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 206
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +S + ++L + + KW+K NL S E +RH+ DS+ V
Sbjct: 5 LELLLTKAGIELSLQQKQQLVAYVDMLNKWNKAYNLTSVREPEQMLVRHIMDSIVVSPYL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 65 -QGHRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELDLVNIEPV 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 121 QSRVEAYSSEPPFDGVISRAFASLKDMVSWCSHL 154
>gi|330831715|ref|YP_004394667.1| ribosomal RNA small subunit methyltransferase G [Aeromonas veronii
B565]
gi|328806851|gb|AEB52050.1| Ribosomal RNA small subunit methyltransferase G [Aeromonas veronii
B565]
Length = 211
Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 6 SNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
N + R N LL + + +L L KW+K NL S + ++H+ DSL
Sbjct: 2 ENMLERLNGLLMQAGIVITDTQKSQLVQLVELLHKWNKAYNLTSVRDPDAMLVKHILDSL 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V H + +ID+G+G G PG+ +I + L++S K+ +F+R V+Q+
Sbjct: 62 -VVSPHLHGERFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVIQELGL 117
Query: 124 RGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A L+ +L +
Sbjct: 118 TNVTPVKSRVEE-YQPEVGFDGVLSRAFASLEDMLSWCHHL 157
>gi|169825319|ref|YP_001692930.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302380961|ref|ZP_07269422.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
gi|193806443|sp|B0S3V0|RSMG_FINM2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167832124|dbj|BAG09040.1| glucose inhibited division protein B [Finegoldia magna ATCC 29328]
gi|302311182|gb|EFK93202.1| 16S rRNA methyltransferase GidB [Finegoldia magna ACS-171-V-Col3]
Length = 230
Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWI 76
+ ++ L + L L+ +K +NL + + E F ++H DSL V L + I
Sbjct: 12 IQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEENKTII 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE- 134
D+G+G GFP I I + ++ L++S K+ FL+ V+ + K R +E
Sbjct: 72 DVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLKDVIDELHLTDIKAVHERAEEC 128
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA++ LDTL E+ P++
Sbjct: 129 TRTAEYREQYDYCISRAVSKLDTLAEFCLPFVK 161
>gi|260774534|ref|ZP_05883447.1| ribosomal RNA small subunit methyltransferase G [Vibrio
metschnikovii CIP 69.14]
gi|260610440|gb|EEX35646.1| ribosomal RNA small subunit methyltransferase G [Vibrio
metschnikovii CIP 69.14]
Length = 210
Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S L A VS + E+L + L KW+K NL S ++ ++H+ DS+ V
Sbjct: 5 RSKLDALIAQTDLVVSDQQREQLVGYVELLNKWNKAYNLTSVRDPQEMLVKHILDSIVVS 64
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ID+G+G G PGI +I + L++S K+ F++ V+ +
Sbjct: 65 PYL-QGKRFIDVGTGPGLPGIPLAIMNPDRQ---FVLLDSLGKRIRFIKQVLHELRIDNV 120
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A + ++E+
Sbjct: 121 TALQSRVEEFKPEHG-FDGVLSRAFASMLDMVEWCHHL 157
>gi|123444381|ref|YP_001008346.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332163558|ref|YP_004300135.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|166224629|sp|A1JTD7|RSMG_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122091342|emb|CAL14228.1| glucose inhibited division protein B [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|318608065|emb|CBY29563.1| rrna small subunit methyltransferase, glucose inhibited division
protein GidB [Yersinia enterocolitica subsp. palearctica
Y11]
gi|325667788|gb|ADZ44432.1| 16S rRNA methyltransferase GidB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861788|emb|CBX71961.1| ribosomal RNA small subunit methyltransferase G [Yersinia
enterocolitica W22703]
Length = 206
Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ + + +L + L KW+K NL S +RH+ DS+ V
Sbjct: 4 KLDSLLSAAGIELPDQQKHQLIGYVELLDKWNKAYNLTSVRDPMQMLVRHILDSI-VVNP 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H S +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 63 HLQGSRFIDVGTGPGLPGIPLAIVRPDAH---FVLLDSLGKRVRFLRQVQHELGLSNIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A L +L +
Sbjct: 120 VQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHL 154
>gi|161505601|ref|YP_001572713.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|189040820|sp|A9MJR0|RSMG_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160866948|gb|ABX23571.1| hypothetical protein SARI_03777 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 207
Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 6/155 (3%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL+ +++ L + + KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLSRLLDEAGISLTDHQKNHLVAYVGMLDKWNKAYNLTSVRDPAEMIVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ID+G+G G PGI +I L L++S K+ FLR V +
Sbjct: 64 L-QGQRFIDVGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITP 119
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L ++ +
Sbjct: 120 VQSRVEAYPSEPPFDGVISRAFASLSDMVSWCRHL 154
>gi|307246579|ref|ZP_07528650.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255564|ref|ZP_07537369.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307260015|ref|ZP_07541727.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852451|gb|EFM84685.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861413|gb|EFM93402.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865851|gb|EFM97727.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 205
Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL N++ + E+L F L KW+K NL S ++ ++H+ DSL V +
Sbjct: 4 KLDRLLEQAQINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSLVVSE- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H + +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 63 HLQGNNFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + T D + +RA A L+ ++++ +
Sbjct: 120 VLSRVEEYKE--QTFDGVLSRAFASLNDMVDWCYHL 153
>gi|121730053|ref|ZP_01682462.1| hypothetical protein VCV52_0002 [Vibrio cholerae V52]
gi|121628202|gb|EAX60725.1| hypothetical protein VCV52_0002 [Vibrio cholerae V52]
Length = 210
Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I E L++S K+ FL+ V+ +
Sbjct: 67 LVGERFIDVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHNLKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESGFDGVLSRAFASMTDMVNWCQHL 157
>gi|147673868|ref|YP_001218411.1| 16S rRNA methyltransferase GidB [Vibrio cholerae O395]
gi|262167090|ref|ZP_06034805.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC27]
gi|172047494|sp|A5F469|RSMG_VIBC3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146315751|gb|ABQ20290.1| hypothetical protein VC0395_A2518 [Vibrio cholerae O395]
gi|227011998|gb|ACP08208.1| glucose inhibited division protein B [Vibrio cholerae O395]
gi|262024476|gb|EEY43162.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
RC27]
Length = 210
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+GSG G PGI +I E L++S K+ FL+ V+ +
Sbjct: 67 LVGERFIDVGSGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESGFDGVLSRAFASMTDMVNWCQHL 157
>gi|168263228|ref|ZP_02685201.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205348134|gb|EDZ34765.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 207
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPD---AYFTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYP 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|71278438|ref|YP_271684.1| 16S rRNA methyltransferase GidB [Colwellia psychrerythraea 34H]
gi|82592862|sp|Q47U39|RSMG_COLP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71144178|gb|AAZ24651.1| methyltransferase GidB [Colwellia psychrerythraea 34H]
Length = 209
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VS+E ++ L + L KW+K NL S + ++H+ DSL V ++ +ID+G+
Sbjct: 18 VSQEQIDLLIQYVELLNKWNKAYNLTSVRDPSEMLVKHIMDSLMVGEVL-IGKNFIDVGT 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMI 139
G G PGI +I L++S K+ +FLR VV + R++E Q
Sbjct: 77 GPGLPGIPLAILYPERN---FVLLDSLGKRITFLRQVVFQLKLSNVTPVKARVEE-YQGE 132
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQKK 168
D + +RA + L+ ++ + + ++
Sbjct: 133 EPFDGVLSRAFSSLNDMVSWCKHLITTEQ 161
>gi|51598259|ref|YP_072450.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis IP
32953]
gi|108810164|ref|YP_654080.1| 16S rRNA methyltransferase GidB [Yersinia pestis Antiqua]
gi|108814146|ref|YP_649913.1| 16S rRNA methyltransferase GidB [Yersinia pestis Nepal516]
gi|145601144|ref|YP_001165220.1| 16S rRNA methyltransferase GidB [Yersinia pestis Pestoides F]
gi|150260937|ref|ZP_01917665.1| glucose inhibited division protein B [Yersinia pestis CA88-4125]
gi|153947796|ref|YP_001403126.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis IP
31758]
gi|162419517|ref|YP_001608480.1| 16S rRNA methyltransferase GidB [Yersinia pestis Angola]
gi|165926220|ref|ZP_02222052.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939988|ref|ZP_02228525.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009598|ref|ZP_02230496.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213356|ref|ZP_02239391.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401525|ref|ZP_02307019.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422855|ref|ZP_02314608.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425517|ref|ZP_02317270.1| methyltransferase GidB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167468639|ref|ZP_02333343.1| glucose-inhibited division protein B [Yersinia pestis FV-1]
gi|186897460|ref|YP_001874572.1| 16S rRNA methyltransferase GidB [Yersinia pseudotuberculosis PB1/+]
gi|218931105|ref|YP_002348980.1| 16S rRNA methyltransferase GidB [Yersinia pestis CO92]
gi|229839839|ref|ZP_04459998.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229841923|ref|ZP_04462079.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229896800|ref|ZP_04511963.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Pestoides A]
gi|229904689|ref|ZP_04519800.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Nepal516]
gi|270488399|ref|ZP_06205473.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM D27]
gi|294505651|ref|YP_003569713.1| glucose-inhibited division protein B [Yersinia pestis Z176003]
gi|20177890|sp|Q8Z9R9|RSMG_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81638065|sp|Q663Q0|RSMG_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122979241|sp|Q1C087|RSMG_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122979846|sp|Q1CCG7|RSMG_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224630|sp|A4TSI5|RSMG_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166989557|sp|A7FPE8|RSMG_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238687313|sp|A9R5U7|RSMG_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691429|sp|B2K7J3|RSMG_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51591541|emb|CAH23213.1| glucose inhibited division protein B [Yersinia pseudotuberculosis
IP 32953]
gi|108777794|gb|ABG20313.1| glucose inhibited division protein B [Yersinia pestis Nepal516]
gi|108782077|gb|ABG16135.1| glucose inhibited division protein B [Yersinia pestis Antiqua]
gi|115349716|emb|CAL22697.1| glucose inhibited division protein B [Yersinia pestis CO92]
gi|145212840|gb|ABP42247.1| glucose inhibited division protein B [Yersinia pestis Pestoides F]
gi|149290345|gb|EDM40422.1| glucose inhibited division protein B [Yersinia pestis CA88-4125]
gi|152959291|gb|ABS46752.1| methyltransferase GidB [Yersinia pseudotuberculosis IP 31758]
gi|162352332|gb|ABX86280.1| methyltransferase GidB [Yersinia pestis Angola]
gi|165912114|gb|EDR30754.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922080|gb|EDR39257.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991520|gb|EDR43821.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205654|gb|EDR50134.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958247|gb|EDR55268.1| methyltransferase GidB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048907|gb|EDR60315.1| methyltransferase GidB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055531|gb|EDR65324.1| methyltransferase GidB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186700486|gb|ACC91115.1| methyltransferase GidB [Yersinia pseudotuberculosis PB1/+]
gi|229678807|gb|EEO74912.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Nepal516]
gi|229691262|gb|EEO83315.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229696205|gb|EEO86252.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229700238|gb|EEO88274.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
Pestoides A]
gi|262363816|gb|ACY60537.1| glucose-inhibited division protein B [Yersinia pestis D106004]
gi|270336903|gb|EFA47680.1| 16S rRNA methyltransferase GidB [Yersinia pestis KIM D27]
gi|294356110|gb|ADE66451.1| glucose-inhibited division protein B [Yersinia pestis Z176003]
gi|320017464|gb|ADW01036.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 206
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + + +L + L KW+K NL S + +RH+ DS+ V H
Sbjct: 5 LDSLLTVAGITLPDQQKHQLIGYVELLDKWNKAYNLTSVRDPQQMLVRHILDSI-VVNPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LQGSRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLNNIEPV 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L +L +
Sbjct: 121 QSRVEAFTSEPPFDGVISRAFASLQDMLSWCHHL 154
>gi|303252045|ref|ZP_07338215.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248703|ref|ZP_07530716.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302649109|gb|EFL79295.1| glucose-inhibited division protein B [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306854630|gb|EFM86820.1| Ribosomal RNA small subunit methyltransferase G [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 205
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL N++ + E+L F L KW+K NL S ++ ++H+ DSL V +
Sbjct: 4 KLDRLLEQAQINLTDQQKEQLVDFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSLVVSE- 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H + +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 63 HLQGNNFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + T D + +RA A L+ ++++ +
Sbjct: 120 VLSRVEEYKE--QTFDGVLSRAFASLNDMVDWCYHL 153
>gi|269140866|ref|YP_003297567.1| glucose-inhibited cell division protein B
(S-adenosylmethionine-dependent methyltransferase)
[Edwardsiella tarda EIB202]
gi|267986527|gb|ACY86356.1| glucose-inhibited cell division protein B
(S-adenosylmethionine-dependent methyltransferase)
[Edwardsiella tarda EIB202]
gi|304560624|gb|ADM43288.1| Ribosomal RNA small subunit methyltransferase G [Edwardsiella tarda
FL6-60]
Length = 206
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N L +++ + ++L + L KW+K NL S D +RH+ DS+ V
Sbjct: 1 MNKQLDTLLAQAGISLTDQQKQRLLGYVSLLDKWNKAYNLTSVRDPRDMLVRHIMDSIVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 61 NPYL-QGQRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELHLDN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++ D + +RA A L ++ +
Sbjct: 117 IEPVQSRVEAFVAE-PPFDGVISRAFASLQDMVSWCHHL 154
>gi|145640462|ref|ZP_01796046.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|145275048|gb|EDK14910.1| glucose-inhibited division protein B [Haemophilus influenzae
22.4-21]
Length = 203
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V +ID
Sbjct: 13 NIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTNVTPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ +
Sbjct: 128 QPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|261491716|ref|ZP_05988296.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495534|ref|ZP_05991981.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308868|gb|EEY10124.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261312555|gb|EEY13678.1| glucose inhibited division protein B [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 204
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 8 SILRANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + N LL N++ + E+L F L KW+K NL S ++ ++H+ DSL V
Sbjct: 1 MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSL-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I + L++S K+ +F++ +++ +
Sbjct: 60 VSRHLQGETFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGIKN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + + D + +RA A L+ ++++ +
Sbjct: 117 VTPVQSRVEEYTE--SQFDGVLSRAFASLNDMIDWCYHL 153
>gi|331268196|ref|YP_004394688.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
gi|329124746|gb|AEB74691.1| glucose-inhibited division protein B [Clostridium botulinum
BKT015925]
Length = 243
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
+ + + + L W+ K+NL + + E+ +H DS+++FQ +
Sbjct: 19 GLEFNDKKYNQFIKYKDLLKDWNSKVNLTAITEDEEIIKKHFIDSMKIFQFEYLKKANKI 78
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+GGGFPGI I ++ + L++S K+ + L ++ K + R +E
Sbjct: 79 IDIGTGGGFPGIPMKIIRPEVQ---MVLLDSLKKRINVLDDILCKIDIDDVETIHGRAEE 135
Query: 135 AP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ D + +RA+A+L +L E+ P++
Sbjct: 136 FSRNVRYREQFDAVVSRAVANLASLSEFCLPYVK 169
>gi|302390789|ref|YP_003826610.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
gi|302201417|gb|ADL08987.1| methyltransferase GidB [Thermosediminibacter oceani DSM 16646]
Length = 250
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIW 75
+ E + L F ++W+K+INL + E F ++H+ DSL + + + +
Sbjct: 17 GIEIDPEKAKLLGIFKDEIVEWNKRINLTAIVDEEQFIVKHIIDSLIILKKIDFHSGAKL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+G+G GFPG+ I + +V L++S KK FL++ V+K R V R +E
Sbjct: 77 VDVGTGAGFPGVPVKIMRQDL---VVLLMDSSRKKTEFLKHAVKKLGLQRTDVLCARAEE 133
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLY 165
A + D ARA++ L+TL+E P +
Sbjct: 134 AAKSGGYREMYDAAVARAVSGLNTLVELCLPLVK 167
>gi|238750332|ref|ZP_04611834.1| Ribosomal RNA small subunit methyltransferase G [Yersinia rohdei
ATCC 43380]
gi|238711565|gb|EEQ03781.1| Ribosomal RNA small subunit methyltransferase G [Yersinia rohdei
ATCC 43380]
Length = 214
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
+ D + + + LLN ++ + +L + L KW+K NL S +RH+
Sbjct: 3 RSEDIVVLKKLDSLLNAAEITLPDQQKHQLIGYVELLHKWNKAYNLTSVRDPLQMLVRHI 62
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS+ V H S +ID+G+G G PGI +I L++S K+ FLR V
Sbjct: 63 LDSI-VVNPHLQGSRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRIRFLRQVQH 118
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ + R+++ D + +RA A L +L +
Sbjct: 119 ELGLNNIEPVQSRVEDFVAE-PPFDGVISRAFASLQDMLSWCHHL 162
>gi|330505866|ref|YP_004382735.1| 16S rRNA methyltransferase GidB [Pseudomonas mendocina NK-01]
gi|328920152|gb|AEB60983.1| 16S rRNA methyltransferase GidB [Pseudomonas mendocina NK-01]
Length = 214
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWI 76
+S + E+L + L +KW+K NL + ++ RH+ DSL V W+
Sbjct: 19 GIELSAQQQEQLLAYLGLLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAERGDNWL 78
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSGGG PG+ +I L++S KK FL V + +V R++ A
Sbjct: 79 DVGSGGGMPGVPLAIMFPERR---FTLLDSNGKKTRFLVQVKLELKLANLEVVHNRVE-A 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
+ D IS+RA + L+ ++
Sbjct: 135 YRPEQPFDGISSRAFSSLEDFSNWTRHL 162
>gi|149190484|ref|ZP_01868755.1| glucose-inhibited division protein B [Vibrio shilonii AK1]
gi|148835738|gb|EDL52704.1| glucose-inhibited division protein B [Vibrio shilonii AK1]
Length = 211
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 6 SNSILRANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+N ++ LL+ + VS ++L + L KW+K NL S ED ++H+ DS+
Sbjct: 3 NNLTVKLEQLLSETSLEVSELQKQQLVGYVQLLDKWNKAYNLTSVRRPEDMLVKHILDSI 62
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V + H +ID+G+G G PGI +I + L++S K+ F++ VV +
Sbjct: 63 IVGE-HLEGERFIDVGTGPGLPGIPLAIMHPN---RSFTLLDSLGKRIRFIKQVVHELKL 118
Query: 124 RGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E D + +RA A + ++ + +
Sbjct: 119 SNVTAVQSRVEEF-DPEGGFDGVLSRAFASMTDMVNWCEHLPKSQ 162
>gi|225181153|ref|ZP_03734599.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
gi|225168122|gb|EEG76927.1| methyltransferase GidB [Dethiobacter alkaliphilus AHT 1]
Length = 235
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWI 76
+ E ++ E +Y ++ ++++NL + + I+H DSL V + +
Sbjct: 13 NITLPPEAPDRFEMYYRQLVEANRQVNLTRITEPAEVMIKHFLDSLEVLSACREFKGPLL 72
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+G+G G PGI I I + L++S K+ SFL+ +V V R ++
Sbjct: 73 DVGTGAGLPGIPLKIACPQI---SLTLLDSSKKRVSFLKDLVSALELENVTVIHGRAEDY 129
Query: 136 P---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +RA+A L+ L E P++ Q
Sbjct: 130 ARQDDYREQFPFVVSRAVARLNVLAELCLPFVSQ 163
>gi|238765115|ref|ZP_04626049.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
kristensenii ATCC 33638]
gi|238696667|gb|EEP89450.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
kristensenii ATCC 33638]
Length = 206
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LLN + + +L + L KW+K NL S +RH+ DS+ V
Sbjct: 4 KLDSLLNAAGIALPDQQKHQLVGYVELLDKWNKAYNLTSVRDPMQMLVRHILDSI-VVNP 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H + +ID+G+G G PGI +I L++S K+ FLR V + +
Sbjct: 63 HLQGNRFIDVGTGPGLPGIPLAIVRPDAH---FVLLDSLGKRVRFLRQVQHELGLSNIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A L +L +
Sbjct: 120 VQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHL 154
>gi|219849945|ref|YP_002464378.1| 16S rRNA methyltransferase GidB [Chloroflexus aggregans DSM 9485]
gi|254766886|sp|B8G6Y3|RSMG_CHLAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219544204|gb|ACL25942.1| methyltransferase GidB [Chloroflexus aggregans DSM 9485]
Length = 238
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ +L +S + + + + W+ + NL + RH+ DSL
Sbjct: 3 GNTERLLIETTTAWGIPLSEHQYAQFQRYLDELIIWNDRFNLTAIRDRSAMIRRHLLDSL 62
Query: 64 RVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P+ ID+GSG GFP + I ++ V L+E+ KKA FLR+V++
Sbjct: 63 YLARDWQTAPANLIDIGSGAGFPALPLKIAYPTLP---VTLVEATGKKAEFLRHVIECLE 119
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+V RI+ + +V++ARA+A+L L+EY+ P L
Sbjct: 120 LTDVRVLHERIETVGRNLAEREQYEVVTARAVAELRVLVEYALPLLR 166
>gi|312897436|ref|ZP_07756860.1| 16S rRNA methyltransferase GidB [Megasphaera micronuciformis F0359]
gi|310621497|gb|EFQ05033.1| 16S rRNA methyltransferase GidB [Megasphaera micronuciformis F0359]
Length = 237
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 13/171 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M C + + R Y N++ + LEK + F L + +K +NL + + ++ ++H
Sbjct: 1 MFPCKGDELFRLAYP----NITDDELEKFKIFAGLLEEKNKVMNLTAITDADEVTVKHFI 56
Query: 61 DSLRVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + + +DLG+G GFPGI +I ++ + +S K+ +FL+ V
Sbjct: 57 DSLSCYDERFFFTGAKVLDLGTGAGFPGIPLAIMHDDLK---ITFFDSLQKRLTFLKEVT 113
Query: 119 QKTAAR-GKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ + + R +E D+++ RA+A L L+E++ P++
Sbjct: 114 TTLSYKQAEFLHGRAEEEAHKDIYREAFDIVTTRAVARLPVLVEWALPYVK 164
>gi|169334514|ref|ZP_02861707.1| hypothetical protein ANASTE_00917 [Anaerofustis stercorihominis DSM
17244]
gi|169259231|gb|EDS73197.1| hypothetical protein ANASTE_00917 [Anaerofustis stercorihominis DSM
17244]
Length = 236
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D L+A + + EKL F + L+ +KK NL + + ++F +H+ DS
Sbjct: 2 DLREYLKAGLKKSGIEIEDNKAEKLLKFMEIVLRENKKFNLTAITDEKEFIEKHIIDSAI 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ID+GSG G PGII I ++ + L++S NK+ ++L +++
Sbjct: 62 AVKYIKNEGKLIDIGSGAGMPGIIIKILNDDMD---ILLLDSLNKRVNYLNETIKELELN 118
Query: 125 G-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + D ++ARA+A L+ L EY+ P++
Sbjct: 119 NIEAIHARAEELSHDKDYRESFDYVTARAVAKLNVLTEYTTPFIK 163
>gi|99082706|ref|YP_614860.1| methyltransferase GidB [Ruegeria sp. TM1040]
gi|123252057|sp|Q1GCL8|RSMG_SILST RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|99038986|gb|ABF65598.1| methyltransferase GidB [Ruegeria sp. TM1040]
Length = 205
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 65/150 (43%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+VSRETLE+L F + KW+ KINLVS +++D W RH+ DS++VF P W+D
Sbjct: 9 ELDVSRETLERLMVFSEVLKKWNPKINLVSRKSIDDLWTRHILDSIQVFDAAPEGGAWLD 68
Query: 78 LGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
+GSGGG PGII +I + + L+ES +K +FLR ++ V + RI+ AP
Sbjct: 69 IGSGGGLPGIIVAILAAEKSPDTRITLMESDLRKCAFLRNAARECGVSVTVKSKRIESAP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ CDV+SARALADLD LL ++ L +
Sbjct: 129 E--ENCDVLSARALADLDNLLGFAERHLAE 156
>gi|237809877|ref|YP_002894317.1| methyltransferase GidB [Tolumonas auensis DSM 9187]
gi|237502138|gb|ACQ94731.1| methyltransferase GidB [Tolumonas auensis DSM 9187]
Length = 209
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++S + ++L L KW+K NL S E +RH+ DS+ V
Sbjct: 8 LESLLQQANISLSDQQKQQLLALVGLLHKWNKAYNLTSVREPEAMLVRHILDSIVVAPYL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
S +ID+G+G G PG+ +I + L++S K+ F+R V+ + + V
Sbjct: 68 N-GSRFIDVGTGPGLPGLPLAIVQPDKQ---FVLLDSLGKRIRFIRQVILELGLKNVVAV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D + +RA A L+ +L +
Sbjct: 124 QSRVEEFHDETG-FDGVLSRAFASLNDMLSWCRHL 157
>gi|254360967|ref|ZP_04977113.1| glucose inhibited division protein B [Mannheimia haemolytica
PHL213]
gi|153092446|gb|EDN73509.1| glucose inhibited division protein B [Mannheimia haemolytica
PHL213]
Length = 204
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 8 SILRANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + N LL N++ + E+L F L KW+K NL S ++ ++H+ DSL V
Sbjct: 1 MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVRNPDEMLVKHILDSL-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I + L++S K+ +F++ +++ +
Sbjct: 60 VSRHLQGETFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGIKN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + + D + +RA A L+ ++++ +
Sbjct: 117 VTPVQSRVEEYTE--SQFDGVLSRAFASLNDMIDWCYHL 153
>gi|110677825|ref|YP_680832.1| methyltransferase GidB [Roseobacter denitrificans OCh 114]
gi|123065967|sp|Q16CZ7|RSMG_ROSDO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109453941|gb|ABG30146.1| methyltransferase GidB [Roseobacter denitrificans OCh 114]
Length = 199
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 62/153 (40%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ VSRET+ L+ ++ L LKW+ +INL+S S++ED W RH+ DS +V W
Sbjct: 1 MDASTVSRETMHALQMYHDLLLKWNARINLISKSSIEDVWSRHIWDSAQVVDCVAKAKTW 60
Query: 76 IDLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLGSGGG PGI+ +I +I+ V L+ES +KA+FLR V+++ + +V RI++
Sbjct: 61 VDLGSGGGMPGIVVAIFAKNIDPDRRVILVESDQRKAAFLRTVIRELSLNARVIVERIED 120
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV+SARALADL LL ++ L +
Sbjct: 121 VAPLR--ADVVSARALADLSVLLSFAQRHLSAQ 151
>gi|332143483|ref|YP_004429221.1| glucose-inhibited division protein B [Alteromonas macleodii str.
'Deep ecotype']
gi|254766873|sp|B4RS91|RSMG_ALTMD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|327553505|gb|AEB00224.1| glucose-inhibited division protein B [Alteromonas macleodii str.
'Deep ecotype']
Length = 211
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ ++IL + +S ++L + L KW+K NL S + ++H+ DSL
Sbjct: 6 ELHTILVQGLDALSLELSERQQQQLVDYVLLMDKWNKAYNLTSVRDPKQMMVKHILDSLA 65
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ H ID+G+G G PG+ +I L++S K+ F+ V +
Sbjct: 66 IVP-HLEGDNIIDVGTGPGLPGMPLAIAFPEKR---FTLLDSLGKRVRFMTQSVHTLGLK 121
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
EA D++ +RA A L +L + +
Sbjct: 122 NVTPVQSRVEAHNGEVPYDIVLSRAFASLKDMLHWCQHLV 161
>gi|299782734|gb|ADJ40732.1| Glucose inhibited division protein B [Lactobacillus fermentum CECT
5716]
Length = 245
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + ++ + + +Y L ++ ++ +NL + + + +++H DSL
Sbjct: 2 NPEEFLQALLDHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLTG 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+P D+G+G GFP + I +E V +++S NK+ +FL +
Sbjct: 62 AFAYPKLQSQALTLCDIGAGAGFPSLPLKIAFPQLE---VTIVDSLNKRINFLADLCDDL 118
Query: 122 AARGK-VFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFP 162
G + R + D+++ARA+A L L E P
Sbjct: 119 GLTGVXLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLP 164
>gi|297588069|ref|ZP_06946713.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
gi|297574758|gb|EFH93478.1| 16S rRNA methyltransferase GidB [Finegoldia magna ATCC 53516]
Length = 230
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIW 75
+ ++ L + L L+ +K +NL + + E F ++H DSL V L +
Sbjct: 11 EIQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEENKTI 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
ID+G+G GFP I I + ++ L++S K+ FLR V+ + K R +E
Sbjct: 71 IDVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLRDVIDELQLTDIKAVHERAEE 127
Query: 135 ---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA++ L+TL E+ P++
Sbjct: 128 CTRTAEYRERYDYCISRAVSKLNTLAEFCLPFVK 161
>gi|313893548|ref|ZP_07827118.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
gi|313441991|gb|EFR60413.1| 16S rRNA methyltransferase GidB [Veillonella sp. oral taxon 158
str. F0412]
Length = 250
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLG 79
+ E + +Y ++ +K +NL + +++ ++H+ DSL + + ID+G
Sbjct: 31 TEEQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSNIIKPGMSIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
+G GFPGI +I S++ V L +S K+ +FL V+ + R ++
Sbjct: 91 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESVMDELNLTNCTTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKE 177
>gi|153956501|ref|YP_001397266.1| 16S rRNA methyltransferase GidB [Clostridium kluyveri DSM 555]
gi|219856804|ref|YP_002473926.1| hypothetical protein CKR_3461 [Clostridium kluyveri NBRC 12016]
gi|189039495|sp|A5N449|RSMG_CLOK5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766888|sp|B9DXR9|RSMG_CLOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146349359|gb|EDK35895.1| GidB [Clostridium kluyveri DSM 555]
gi|219570528|dbj|BAH08512.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 237
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
N ++E K + + W+ K+NL + +D +H DS+RVF+ P
Sbjct: 15 GLNFNQEKYNKFIKYKDILKLWNDKMNLTAIVDDKDIIKKHFIDSIRVFKFLPLKDAKSI 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G GFPGI I ++ + L++S NK+ FL VV R ++
Sbjct: 75 IDVGTGAGFPGIPIKIIKPEVK---LILLDSLNKRIKFLNQVVLSIKLNDVTCIHGRAED 131
Query: 135 AP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ DV+ +RA+A+L L E+ P++
Sbjct: 132 CARKIEYRENNDVVVSRAVANLTVLSEFCIPYIK 165
>gi|168464789|ref|ZP_02698681.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|195632297|gb|EDX50781.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
Length = 207
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 13 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I L L++S K+ FLR V + EA
Sbjct: 72 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQSRVEAYL 128
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L+ ++ +
Sbjct: 129 SEPPFDGVISRAFASLNDMVSWCHHL 154
>gi|306842825|ref|ZP_07475465.1| methyltransferase GidB [Brucella sp. BO2]
gi|306287019|gb|EFM58530.1| methyltransferase GidB [Brucella sp. BO2]
Length = 213
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKDATCWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++++ES KKA+FLR +V A RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPGGSIDMVESAGKKAAFLRTAAGHLHVPARVHAARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|303230681|ref|ZP_07317431.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
gi|302514736|gb|EFL56728.1| 16S rRNA methyltransferase GidB [Veillonella atypica
ACS-049-V-Sch6]
Length = 250
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLG 79
+++ + +Y ++ +K +NL + +++ ++H+ DSL + ++ S ID+G
Sbjct: 31 TQQQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDSKIIKSGSSIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
+G GFPGI +I ++ V L +S K+ +FL V+ + K R ++
Sbjct: 91 TGAGFPGIPLAIYDRTLH---VTLFDSLKKRLTFLETVIDELQLTNCKTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ Q
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKQ 177
>gi|303234724|ref|ZP_07321352.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
gi|302494207|gb|EFL53985.1| 16S rRNA methyltransferase GidB [Finegoldia magna BVS033A4]
Length = 230
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWI 76
+ ++ L + L L+ +K +NL + + E F ++H DSL V L + I
Sbjct: 12 IQLDDNQIDLLLKYMDLVLEKNKVMNLTAITEEEMFHVKHFVDSLYVLNLFDFEENKTII 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE- 134
D+G+G GFP I I + ++ L++S K+ FL+ V+ + K R +E
Sbjct: 72 DVGTGAGFPAIPIKIARNDLK---FTLLDSLRKRVDFLKDVIDELHLTEIKAVHERAEEC 128
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA++ LDTL E+ P++
Sbjct: 129 TRTAEYRERYDYCISRAVSKLDTLAEFCLPFVK 161
>gi|255540789|ref|XP_002511459.1| Methyltransferase gidB, putative [Ricinus communis]
gi|223550574|gb|EEF52061.1| Methyltransferase gidB, putative [Ricinus communis]
Length = 282
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--------- 70
+++ E++ ++ L+W++K+NL + + + RH+EDSL +
Sbjct: 54 SLNSRQKEQIRHYVDALLEWNQKMNLTAVTEANEVMRRHIEDSLAMLTPIRKSYISHCSS 113
Query: 71 --YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+D+G+G G PG+I +I + V L+ES NK+ FL + V T +V
Sbjct: 114 SIDNLKLVDVGTGPGLPGLILAIACPGWK---VTLLESMNKRCVFLEHAVNVTGLSNVEV 170
Query: 128 FACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R + Q DV ARA+A++ L EY P +
Sbjct: 171 LRGRAESLGQNDSFREQFDVAVARAVAEMRVLAEYCLPLVR 211
>gi|146278698|ref|YP_001168857.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17025]
gi|189040716|sp|A4WVY8|RSMG_RHOS5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145556939|gb|ABP71552.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17025]
Length = 208
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 63/155 (40%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-S 73
+ NVSRETL KLE + L KW+ INL+ ST WIRH++DS +++ L P
Sbjct: 8 VAEALNVSRETLGKLEQYADLVRKWNSAINLIGRSTEGQIWIRHIQDSAQLWGLRAAPFG 67
Query: 74 IWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+DLGSGGG PGI+ + I L+ES +KA+FLR + V A R+
Sbjct: 68 TWLDLGSGGGLPGIVLATIATEKAPESRFVLVESDQRKATFLRTAARTLCLNVTVHAARV 127
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ P DVISARALA L L + P L +
Sbjct: 128 EQLPPQR--ADVISARALAPLTDLCALAAPHLAPE 160
>gi|312882251|ref|ZP_07741997.1| 16S rRNA methyltransferase GidB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370095|gb|EFP97601.1| 16S rRNA methyltransferase GidB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 210
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ +L VS EKL + L KW+K NL S + I+H+ DS+ V
Sbjct: 5 SQLLDDLIDQTNLEVSTIQKEKLLGYVSLLDKWNKAYNLTSVRKPSEMVIKHIMDSIVVS 64
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +ID+G+G G PGI +I + E L++S K+ F++ V+ + +
Sbjct: 65 EYL-EGDRFIDVGTGPGLPGIPLAIMQPNKE---FVLLDSLGKRVRFIKQVIHELDIKNV 120
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A + ++E+
Sbjct: 121 TPVQSRVEE-YQTNDKFDGVLSRAFASMTDMVEWCQHL 157
>gi|294638359|ref|ZP_06716612.1| 16S rRNA methyltransferase GidB [Edwardsiella tarda ATCC 23685]
gi|291088612|gb|EFE21173.1| 16S rRNA methyltransferase GidB [Edwardsiella tarda ATCC 23685]
Length = 206
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L +++ + ++L + L KW+K NL S + +RH+ DS+ V
Sbjct: 1 MHKQLDTLLAQAGISLTDQQKQQLLAYVELLDKWNKAYNLTSVRDPREMLVRHIMDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I L++S K+ FLR V
Sbjct: 60 VSPHLQGQRFIDVGTGPGLPGIPLAIVRPESH---FTLLDSLGKRVRFLRQVQHALQLNN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++ D + +RA A L +L +
Sbjct: 117 IEPVQSRVESFVAE-PPFDGVISRAFASLQDMLAWCHHL 154
>gi|145634515|ref|ZP_01790224.1| glucose-inhibited division protein B [Haemophilus influenzae
PittAA]
gi|319897995|ref|YP_004136192.1| methyltransferase, sam-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3031]
gi|145268060|gb|EDK08055.1| glucose-inhibited division protein B [Haemophilus influenzae
PittAA]
gi|317433501|emb|CBY81884.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3031]
Length = 203
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V +ID
Sbjct: 13 NIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTNVTPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ +
Sbjct: 128 QPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|254226942|ref|ZP_04920508.1| hypothetical protein VCV51_1868 [Vibrio cholerae V51]
gi|125620547|gb|EAZ48915.1| hypothetical protein VCV51_1868 [Vibrio cholerae V51]
Length = 210
Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I E L++S K+ FL+ V+ +
Sbjct: 67 LVGEHFIDVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLLV 123
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E + D + +RA A + ++ +
Sbjct: 124 QSRVEEFDPESGFDGVLSRAFASMTDMVNWCQHL 157
>gi|304438031|ref|ZP_07397975.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368985|gb|EFM22666.1| 16S rRNA methyltransferase GidB [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 240
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL A ++ E + + ++ + L W+ ++NL + + ED ++H+ DSL +
Sbjct: 6 EILAARAAEAGIPLTAEQIGQFSVYHEMLLDWNTRMNLTALTAPEDVVVKHIIDSLMAYD 65
Query: 68 L--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G G PGI ++ + V L++S NK+ FL V +
Sbjct: 66 AARFDGARTLIDVGTGAGLPGIPLAVYAPHL---TVTLLDSLNKRVRFLTEVTAAMGLQN 122
Query: 126 ----KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A + D+ +RA+A L LLEY+ P++
Sbjct: 123 VRCIHARAEEAARTAEHRAAYDIAVSRAVARLPVLLEYTLPFVR 166
>gi|294792405|ref|ZP_06757552.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
gi|294456304|gb|EFG24667.1| 16S rRNA methyltransferase GidB [Veillonella sp. 6_1_27]
Length = 244
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLG 79
+ E + L +Y ++ +K +NL +++ ++H+ DSL + ++ ID+G
Sbjct: 25 TEEQAKDLYMYYAHMIETNKYLNLTGIIDMKEVVVKHMIDSLSCYDSEIIKSGMTIIDVG 84
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
+G GFPGI +I S++ V L +S K+ +FL V+ K R ++
Sbjct: 85 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESVIDKLKLTNCTTLHGRAEDLSHQ 141
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 142 DYRESFDIATSRAVARLPILLEWTVPYVKE 171
>gi|240950031|ref|ZP_04754339.1| glucose-inhibited division protein B [Actinobacillus minor NM305]
gi|240295509|gb|EER46252.1| glucose-inhibited division protein B [Actinobacillus minor NM305]
Length = 205
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 8 SILRANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + LL+ N+S + ++L F L KW+K NL S ++ ++H+ DSL V
Sbjct: 1 MLEKLDRLLSQANISLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDSLVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Q H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 61 SQ-HLQGQQFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNAIRELKLTN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYQE--QQFDGVLSRAFASLNDMVDWCYHL 153
>gi|212712653|ref|ZP_03320781.1| hypothetical protein PROVALCAL_03748 [Providencia alcalifaciens DSM
30120]
gi|212684869|gb|EEB44397.1| hypothetical protein PROVALCAL_03748 [Providencia alcalifaciens DSM
30120]
Length = 207
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D S L ++ + ++L + L KW+K NL S E +RH+ DS+
Sbjct: 2 DLLSKLTKLLAKADIQLTDKQKQQLVDYVGLLHKWNKAYNLTSVREPEQMLVRHIMDSI- 60
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V H + +ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 61 VVNGHLKGNKFIDVGTGPGLPGVPLAIVRPDAH---FVLLDSLGKRVRFLKQVQHELGLT 117
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P D + +RA A L+ +L +
Sbjct: 118 NIEPVQFRVEEYPAN-EGFDGVISRAFASLNDMLSWCHHL 156
>gi|81427630|ref|YP_394627.1| glucose-inhibited division protein B [Lactobacillus sakei subsp.
sakei 23K]
gi|123564972|sp|Q38ZR1|RSMG_LACSS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78609269|emb|CAI54316.1| Methyltransferase GidB (Glucose Inhibited Cell Division protein B)
[Lactobacillus sakei subsp. sakei 23K]
Length = 246
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----LRVFQLHPYP 72
+ +VS++ L++ E ++ + ++ +NL + + E +++H DS L + L P
Sbjct: 13 HQIDVSQKQLDQFEIYFERLVATNQNVNLTAITEKEAVYLKHFFDSVAPTLYLESLRTMP 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP + I ++ V +++S NK+ FL +V + + R
Sbjct: 73 LNICDIGAGAGFPSLPMKILFPQLK---VTIVDSLNKRIHFLEELVAELGLTDVTLVHDR 129
Query: 132 IQEAPQ----MITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D+++ARA+A ++ L E+ P +
Sbjct: 130 AELFSQVKRPYREQFDMVTARAVAPMNVLAEFCLPAVK 167
>gi|254509067|ref|ZP_05121170.1| methyltransferase GidB [Vibrio parahaemolyticus 16]
gi|219548000|gb|EED25022.1| methyltransferase GidB [Vibrio parahaemolyticus 16]
Length = 210
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L VS +L + + KW+K NL S E+ ++H+ DS+ + H
Sbjct: 8 LDELIAQTDLEVSELQRNQLVGYVEMLNKWNKAYNLTSVRDPEEMLVKHILDSI-IVSTH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
+ID+G+G G PGI +I +L++S K+ F++ + +
Sbjct: 67 LQGERFIDVGTGPGLPGIPLAIMCPDKH---FHLLDSLGKRIRFIKQALHELKIENVMPI 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A + ++ +
Sbjct: 124 QSRVEEF-QPQEKFDAVLSRAFASMVDMVSWCHHL 157
>gi|114705862|ref|ZP_01438765.1| putative GidB, Glucose inhibited division protein [Fulvimarina
pelagi HTCC2506]
gi|114538708|gb|EAU41829.1| putative GidB, Glucose inhibited division protein [Fulvimarina
pelagi HTCC2506]
Length = 248
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
++VSRETL L+ + + W ++NLV+ ST+ W RH+ DSL++ P
Sbjct: 49 ERFTARFDVSRETLTALDRYVAMLTDWQTRMNLVAPSTLATVWERHIADSLQLEAFLPPF 108
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
DLGSGGG PGI+ +I + V+L+ES KKA+FLR V + V A RI
Sbjct: 109 ETGADLGSGGGLPGIVIAIMRPEAK---VHLVESVGKKATFLRAVADELGLNTHVHARRI 165
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ + + +V++ARA+A LD LL P +
Sbjct: 166 EASGHALRQSEVVTARAVASLDRLLGLVSPHI 197
>gi|238795164|ref|ZP_04638753.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
intermedia ATCC 29909]
gi|238725522|gb|EEQ17087.1| Ribosomal RNA small subunit methyltransferase G [Yersinia
intermedia ATCC 29909]
Length = 206
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Query: 11 RANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LLNT + + +L + L KW+K NL S + +RH+ DS+ V
Sbjct: 4 KLDSLLNTAGIVLPDQQKLQLIGYVELLHKWNKAYNLTSVRDPQQMLVRHILDSIVVNPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI +I + L++S K+ FLR V + +
Sbjct: 64 L-QGDRFIDVGTGPGLPGIPLAIVRPTAH---FTLLDSLGKRVRFLRQVQHELGLNNIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A L +L +
Sbjct: 120 VQSRVEDFAA-KPPFDGVISRAFASLQDMLSWCHHL 154
>gi|229550864|ref|ZP_04439589.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
gi|229315689|gb|EEN81662.1| glucose-inhibited division protein B [Lactobacillus rhamnosus
LMS2-1]
Length = 256
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL V +L P
Sbjct: 26 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQSQP 85
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 86 LSLCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 142
Query: 132 IQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A L+ L E P Q
Sbjct: 143 AETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQ 181
>gi|167854765|ref|ZP_02477543.1| methyltransferase GidB [Haemophilus parasuis 29755]
gi|167854063|gb|EDS25299.1| methyltransferase GidB [Haemophilus parasuis 29755]
Length = 203
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 8 SILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + LL+ N ++ + ++L F L KW+K NL S ++ ++H+ DSL V
Sbjct: 1 MLAKLDRLLSQANIPLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDSLVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Q H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 61 SQ-HLQGQQFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNAIRELKLTN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYQE--QQFDGVLSRAFASLNDMVDWCYHL 153
>gi|23502908|ref|NP_699035.1| 16S rRNA methyltransferase GidB [Brucella suis 1330]
gi|29336737|sp|Q8FY29|RSMG_BRUSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|23348939|gb|AAN30950.1| glucose-inhibited division protein B [Brucella suis 1330]
Length = 213
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLYVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|260771037|ref|ZP_05879965.1| ribosomal RNA small subunit methyltransferase G [Vibrio furnissii
CIP 102972]
gi|260613926|gb|EEX39117.1| ribosomal RNA small subunit methyltransferase G [Vibrio furnissii
CIP 102972]
Length = 211
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A +VS E+L + L KW+K NL S D ++H+ DS+ V L
Sbjct: 8 LDALIAQTDLDVSERQREQLVGYVELLNKWNKAYNLTSVRDTSDMLVKHIMDSIVVSPLL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I L++S K+ F++ V+ +
Sbjct: 68 -VGERFIDVGTGPGLPGIPLAIMNP---TKSFVLLDSLGKRIRFIKQVLHELNITNVTPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E D + +RA A + ++E+ K
Sbjct: 124 QSRVEEFDGGEDGFDGVLSRAFASITDMVEWCHHLPRAK 162
>gi|145301182|ref|YP_001144023.1| 16S rRNA methyltransferase GidB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166224343|sp|A4STQ3|RSMG_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|142853954|gb|ABO92275.1| glucose inhibited division protein B [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 208
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 8 SILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R N LL + + +L L KW+K NL S + ++H+ DSL V
Sbjct: 1 MLQRLNCLLMQAGIVITDTQKTQLVQLVELLHKWNKAYNLTSVRDPDAMLVKHILDSL-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +ID+G+G G PG+ +I + L++S K+ +F+R V+Q
Sbjct: 60 VSPHLHGERFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVIQVLGLTN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A L+ +L +
Sbjct: 117 VTPVKSRVEE-YQPDVGFDCVLSRAFASLEDMLSWCHHL 154
>gi|260595794|ref|YP_003208365.1| 16S rRNA methyltransferase GidB [Cronobacter turicensis z3032]
gi|260214971|emb|CBA26598.1| Ribosomal RNA small subunit methyltransferase G [Cronobacter
turicensis z3032]
Length = 207
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +L + + KW+K NL S + +RH+ DS+ V + H S +ID
Sbjct: 13 GITLPEHQKAQLVAYVDMLNKWNKAYNLTSVRDPNEMLVRHIMDSI-VVEPHLKGSRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI L++S K+ FLR V + R++ P
Sbjct: 72 VGTGPGLPGIPLSIVRPDSH---FTLLDSLGKRVRFLRQVQHELKLDNIAPVQSRVEAFP 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 129 AE-PPFDGVISRAFASLSDMVNWCHHL 154
>gi|254700690|ref|ZP_05162518.1| 16S rRNA methyltransferase GidB [Brucella suis bv. 5 str. 513]
gi|261751199|ref|ZP_05994908.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
5 str. 513]
gi|261740952|gb|EEY28878.1| ribosomal RNA small subunit methyltransferase G [Brucella suis bv.
5 str. 513]
Length = 213
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 66/146 (45%), Positives = 89/146 (60%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
V++ARALA L L + PWL
Sbjct: 137 IPQVVTARALASLGDLFTLAEPWLSD 162
>gi|219871647|ref|YP_002476022.1| 16S rRNA methyltransferase GidB [Haemophilus parasuis SH0165]
gi|254766893|sp|B8F6X2|RSMG_HAEPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219691851|gb|ACL33074.1| methyltransferase, glucose-inhibited division protein B
[Haemophilus parasuis SH0165]
Length = 203
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 8 SILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + LL+ N ++ + ++L F L KW+K NL S ++ ++H+ DSL V
Sbjct: 1 MLAKLDRLLSQANIPLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDSLVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Q H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 61 SQ-HLQGQQFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNAIRELKLTN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYQE--QQFDGVLSRAFASLNDMVDWCYHL 153
>gi|306820324|ref|ZP_07453963.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551653|gb|EFM39605.1| 16S rRNA methyltransferase GidB [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 237
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 10 LRANYLLNTYNV-----SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++ + L N+ + + EK + + L +++K+NL + + +++ + +H DSL
Sbjct: 1 MKKSKFLEALNIWGLKYADDVYEKFDIYTQNLLSYNEKVNLTAITNIDEIYEKHYLDSLS 60
Query: 65 VFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + S ID+G+G GFP I I I + +++S K+ FL ++ K +
Sbjct: 61 ILKYVHLEQNSSIIDVGTGAGFPSIPMKIFREDIN---LCMLDSLAKRVVFLEDMISKLS 117
Query: 123 A-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R ++ Q D +RA+A+L TL EY P++ +
Sbjct: 118 LKKSTALHARAEDLAQKKDYRENFDYAVSRAVANLSTLCEYCIPFVKK 165
>gi|253690609|ref|YP_003019799.1| methyltransferase GidB [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259495499|sp|C6DJG4|RSMG_PECCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|251757187|gb|ACT15263.1| methyltransferase GidB [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 206
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 12 ANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LLN + S + L + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 5 LDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLVRHIMDSI-VVEPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LHGQRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELQLENITPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++E P D + +RA A L ++ +
Sbjct: 121 QSRVEEFPAE-PPFDGVISRAFASLHDMISWC 151
>gi|84394518|ref|ZP_00993228.1| glucose-inhibited division protein B [Vibrio splendidus 12B01]
gi|84374871|gb|EAP91808.1| glucose-inhibited division protein B [Vibrio splendidus 12B01]
Length = 148
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
VS + +L + L KW+K NL S ++ ++H+ DS+ + H +ID
Sbjct: 16 ELEVSEKQRGQLVGYVELLNKWNKAYNLTSVRDPQEMMVKHILDSI-IVSTHLQGKRFID 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI SI E L++S K+ F++ V+ + V R++E
Sbjct: 75 VGTGPGLPGIPLSIMNPDCE---FYLLDSLGKRIRFIKQVIHELGIDNVVPVQSRVEEF- 130
Query: 137 QMITTCDVISARALADL 153
Q D + +RA A +
Sbjct: 131 QPEEKFDAVLSRAFASM 147
>gi|199597912|ref|ZP_03211337.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
gi|199591169|gb|EDY99250.1| Cell division SAM-dependent methyltransferase [Lactobacillus
rhamnosus HN001]
Length = 243
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL V +L P
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPELQSQP 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 LSLCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A L+ L E P Q
Sbjct: 130 AETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQ 168
>gi|258507237|ref|YP_003169988.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus GG]
gi|258538424|ref|YP_003172923.1| 16S rRNA methyltransferase GidB [Lactobacillus rhamnosus Lc 705]
gi|257147164|emb|CAR86137.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus GG]
gi|257150100|emb|CAR89072.1| Ribosomal RNA small subunit methyltransferase G [Lactobacillus
rhamnosus Lc 705]
gi|259648603|dbj|BAI40765.1| methyltransferase GidB [Lactobacillus rhamnosus GG]
Length = 243
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYP 72
+ ++ ++ +Y + ++K+NL + D +++H DSL V +L P
Sbjct: 13 HGIVLNDHQQDQFAAYYQYLISENEKMNLTGITAEGDVYLKHFYDSLTLGLVVPKLQSQP 72
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
D+G+G GFP I I ++ + +++S K+ FL + + ++F R
Sbjct: 73 LSLCDVGAGAGFPSIPLKIAFPQLK---ITIVDSLQKRIGFLERLTARLELTDVQLFHDR 129
Query: 132 IQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+++ARA+A L+ L E P Q
Sbjct: 130 AETFGAKKSPHRGQYDLVTARAVAALNVLAELCLPLAKQ 168
>gi|86134318|ref|ZP_01052900.1| glucose inhibited division protein [Polaribacter sp. MED152]
gi|85821181|gb|EAQ42328.1| glucose inhibited division protein [Polaribacter sp. MED152]
Length = 209
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ LL + +++ E+ L+ W+ KIN+VS +++ ++RHV SL + ++ P+
Sbjct: 2 DILLKYFTDLTETQKEQFSKLQDLYKDWNLKINVVSRKDIDELYLRHVLHSLGIAKVMPF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +D+G+GGGFPGI +I + +L++S KK + V +
Sbjct: 62 KPGAKVMDVGTGGGFPGIPLAILFPETQ---FHLVDSIGKKIKVVNEVAEGLGLENVTTT 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++E T D I +RA+A ++T + ++
Sbjct: 119 HGRVEEVED---TYDFIVSRAVAQMETFVRWT 147
>gi|50123436|ref|YP_052603.1| 16S rRNA methyltransferase GidB [Pectobacterium atrosepticum
SCRI1043]
gi|55976380|sp|Q6CYI7|RSMG_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49613962|emb|CAG77415.1| glucose inhibited division protein B [Pectobacterium atrosepticum
SCRI1043]
Length = 206
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 12 ANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LLN + S + L + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 5 LDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLVRHIMDSI-VVEPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LHGQRFIDVGTGPGLPGIPLAIVRPESH---FTLLDSLGKRVRFLRQVQHELQLENITPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R+++ P D + +RA A L ++ +
Sbjct: 121 QSRVEDFPAE-PPFDGVISRAFASLQDMISWC 151
>gi|298293754|ref|YP_003695693.1| methyltransferase GidB [Starkeya novella DSM 506]
gi|296930265|gb|ADH91074.1| methyltransferase GidB [Starkeya novella DSM 506]
Length = 217
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 4/167 (2%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M DS+ RA L VSRET ++L L KW + INLV+ +T+ W RHV
Sbjct: 1 MNASDSSDRARALRL---TPVSRETEDRLVAIVALLEKWQRTINLVAPATLPVVWTRHVA 57
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL++ L + W+DLGSGGGFPG++ + L+ G V L+ES ++KA+FLR +
Sbjct: 58 DSLQLIPLAGEATRWVDLGSGGGFPGLVVAAVLAERPGADVTLVESDSRKAAFLREAARI 117
Query: 121 TAARGKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V RI++ AP++ +++SARALA L LL+ + P+L Q
Sbjct: 118 AELPATVLPSRIEQVAPKIAEGVEIVSARALAPLPKLLDLAAPFLAQ 164
>gi|315178651|gb|ADT85565.1| glucose-inhibited division protein B [Vibrio furnissii NCTC 11218]
Length = 211
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A +VS E+L + L KW+K NL S D ++H+ DS+ V L
Sbjct: 8 LDALIAQTDLDVSERQCEQLVGYVELLNKWNKAYNLTSVRDTSDMLVKHIMDSIVVSPLL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I L++S K+ F++ V+ +
Sbjct: 68 -VGERFIDVGTGPGLPGIPLAIMNP---TKSFVLLDSLGKRIRFIKQVLHELNITNVTPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E D + +RA A + ++E+ K
Sbjct: 124 QSRVEEFDGGEDGFDGVLSRAFASITDMVEWCHHLPRAK 162
>gi|322513171|ref|ZP_08066302.1| glucose inhibited division protein B [Actinobacillus ureae ATCC
25976]
gi|322121067|gb|EFX92891.1| glucose inhibited division protein B [Actinobacillus ureae ATCC
25976]
Length = 203
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + N++ + E+L F L KW+K NL S ++ ++H+ DSL V
Sbjct: 1 MKQKLDRLLVQAQINLTDQQKEQLVGFVRLLGKWNKAYNLTSVRNPDEMLVKHILDSLVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 61 SE-HLQGEKFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNALRELGITN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + T D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYTE--QTFDGVLSRAFASLNDMVDWCYHL 153
>gi|323705841|ref|ZP_08117413.1| methyltransferase GidB [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534837|gb|EGB24616.1| methyltransferase GidB [Thermoanaerobacterium xylanolyticum LX-11]
Length = 240
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLH 69
LN ++V E+ + L L+W++K+NL + + + I+H DSL ++
Sbjct: 16 LGIELNMFHV-----EQFLKYSDLLLEWNEKMNLTAITEEREIIIKHFLDSLTALKCKVI 70
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVF 128
ID+G+G GFP + I S++ + +++S K+ FL +V + ++
Sbjct: 71 KGSERIIDVGAGAGFPSVPLKILYPSLK---LTIVDSLKKRTVFLDELVSYLNLKDVEII 127
Query: 129 ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + + D+ +RA+A L+ L+EY P+
Sbjct: 128 HGRAEDLGKDSGLREKYDISLSRAVAQLNVLVEYCIPFTK 167
>gi|227327864|ref|ZP_03831888.1| glucose-inhibited division protein B [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 206
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 12 ANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LLN + S + L + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 5 LDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLVRHIMDSI-VVEPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LDGQRFIDVGTGPGLPGIPLAIVRPESH---FTLLDSLGKRVRFLRQVQHELQLENITPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L ++ +
Sbjct: 121 QSRVEEFPAE-PPFDGVISRAFASLQDMISWCSHL 154
>gi|90421003|ref|ZP_01228907.1| glucose-inhibited division protein B [Aurantimonas manganoxydans
SI85-9A1]
gi|90334781|gb|EAS48557.1| glucose-inhibited division protein B [Aurantimonas manganoxydans
SI85-9A1]
Length = 240
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
L+T NVSRETLE+L+ + L +W ++NLV+ +T+ D W RH+ DSL + +L P
Sbjct: 41 AEFLSTRNVSRETLERLDRYVALLTEWQTRMNLVAPATIGDVWSRHIADSLALERLLPNV 100
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
++ +DLGSG G PG++ + ++ V+L+E+ +KK +FLR V + G RI
Sbjct: 101 TVCVDLGSGAGLPGLVIAAARPAL---SVDLVEANSKKIAFLRAVQRDLGLSGMAHGARI 157
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
++ ++ D++ ARALA L L P +
Sbjct: 158 EDCGAVLAKADIVIARALASLTELFALVAPHIR 190
>gi|259910325|ref|YP_002650681.1| 16S rRNA methyltransferase GidB [Erwinia pyrifoliae Ep1/96]
gi|224965947|emb|CAX57480.1| Methyltransferase (Glucose-inhibited division protein B) [Erwinia
pyrifoliae Ep1/96]
gi|283480448|emb|CAY76364.1| glucose-inhibited division protein GidB [Erwinia pyrifoliae DSM
12163]
Length = 208
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S ++L + + KW+K NL S + +RH+ DS+ V + H +ID
Sbjct: 13 GIPLSDSQKQQLVGYVGMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLVGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I L++S K+ FL+ V + R+++
Sbjct: 72 VGTGPGLPGVPLAIVRPQAH---FTLLDSLGKRVRFLKQVQHELKLANITPVQSRVEDFA 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 129 GE-PPFDGVISRAFASLTDMVSWCHHL 154
>gi|306843476|ref|ZP_07476077.1| methyltransferase GidB [Brucella sp. BO1]
gi|306276167|gb|EFM57867.1| methyltransferase GidB [Brucella sp. BO1]
Length = 213
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 91/146 (62%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS+++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLVDLWNRHILDSVQLFPLAKDATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERPGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|291285164|ref|YP_003501982.1| Ribosomal RNA small subunit methyltransferase G [Escherichia coli
O55:H7 str. CB9615]
gi|290765037|gb|ADD58998.1| Ribosomal RNA small subunit methyltransferase G [Escherichia coli
O55:H7 str. CB9615]
Length = 207
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL +++ +L + + KW+K N S + +RH+ DS+ V
Sbjct: 4 KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNPTSVRDPNEMLVRHILDSIVVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PGI SI L++S K+ FLR V + +
Sbjct: 64 L-QGERFIDVGTGPGLPGIPLSIVRPEAH---FTLLDSLGKRVRFLRQVQHELKLENIEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E P D + +RA A L+ ++ +
Sbjct: 120 VQSRVEEFPSE-PPFDGVISRAFASLNDMVSWCHHL 154
>gi|260662612|ref|ZP_05863507.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum 28-3-CHN]
gi|260553303|gb|EEX26246.1| 16S rRNA methyltransferase GidB [Lactobacillus fermentum 28-3-CHN]
Length = 245
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R L + ++ + + +Y L ++ ++ +NL + + + +++H DSL
Sbjct: 2 NPEEFRQALLDHGIALTDAQMAQFARYYQLLVQTNEHLNLTAITAETEVYLKHFYDSLTG 61
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+P D+G+G GFP + I S +E V +++S NK+ +FL +
Sbjct: 62 AFAYPKLQSQALTLCDIGAGAGFPSLPLKIAFSQLE---VTIVDSLNKRINFLADLCDDL 118
Query: 122 AARG-KVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFP 162
G + R + D+++ARA+A L L E P
Sbjct: 119 GLTGVHLVHDRAETFAAKGSPYREQFDLVTARAVARLVVLGELCLP 164
>gi|332995870|gb|AEF05925.1| glucose-inhibited division protein B [Alteromonas sp. SN2]
Length = 214
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 5/160 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ IL + + +S + KL F L KW+K NL S + ++H+ DSL ++
Sbjct: 8 HEILASGLAAQSLQLSDDQQAKLVGFVLLIDKWNKAYNLTSVRDPKQMMVKHILDSLAIY 67
Query: 67 QLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
ID+G+G G PG+ +I L++S K+ F+ V
Sbjct: 68 PYLAKHEAKHIIDVGTGPGLPGMPLAIAFPDT---AFTLLDSLGKRVRFMTQCVHTLKLS 124
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
EA D++ +RA A L +L + +
Sbjct: 125 NVTPVQSRVEAHTPAQPYDIVLSRAFASLKDMLHWCQHLV 164
>gi|238759550|ref|ZP_04620712.1| Ribosomal RNA small subunit methyltransferase G [Yersinia aldovae
ATCC 35236]
gi|238702209|gb|EEP94764.1| Ribosomal RNA small subunit methyltransferase G [Yersinia aldovae
ATCC 35236]
Length = 206
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + + + +L + L KW+K NL S +RH+ DS+ V H
Sbjct: 5 LNSLLTAAGIALPDQQKYQLVGYVELLHKWNKAYNLTSVRDPMQMLVRHILDSI-VVNPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LQGNRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLTNIDPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ D + +RA A L +L +
Sbjct: 121 QSRVEDFVAE-PPFDGVISRAFASLQDMLSWCHHL 154
>gi|221135170|ref|ZP_03561473.1| methyltransferase GidB [Glaciecola sp. HTCC2999]
Length = 220
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
+ D + + YL+ +++ E L+KL + + KW+K NL S ++D ++HV
Sbjct: 7 QAADQQLVAKLTYLVAKTDLTVTAEQLQKLVMYIEMMHKWNKAYNLTSIRQIDDMLVKHV 66
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS+ V + +ID+G+G G PGI +I E L++S K+ F++ V
Sbjct: 67 LDSIVVSPFL-RGTRFIDVGTGPGLPGIPLAIMHPEYE---FVLLDSLGKRVRFMQQVAY 122
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R++E D + +RA A + +L + +
Sbjct: 123 GLKLNNISPVQSRVEEYKDPNG-FDGVISRAFASIKDMLHWCGHLV 167
>gi|85057734|ref|YP_456650.1| glucose inhibited division protein B [Aster yellows witches'-broom
phytoplasma AYWB]
gi|123518152|sp|Q2NJ22|RSMG_AYWBP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84789839|gb|ABC65571.1| glucose inhibited division protein B [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 212
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L L + + ++++ L K ++Y K ++K+NL S ++ D +H DSL + ++
Sbjct: 1 MLYFESLKDKFKLNKKQLNKFVFYYEFLKKENQKMNLTSLISLSDVCYKHFYDSLILKEI 60
Query: 69 HPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ ++ D+GSG GFP I ++ + +IES KK +FL+ +
Sbjct: 61 FDFNNVTNLCDVGSGAGFPSFPLKILYPHLK---IIIIESSLKKINFLKQLASHLELDNV 117
Query: 127 V-FACRIQEAP-QMITTCDVISARALADLDTLLEYSFPWLYQK 167
F R+++ + D + ARALA L+ +L++ P + ++
Sbjct: 118 CFFHKRVEQHDIAKNGSYDFVVARALARLEIILKWCVPLVKKR 160
>gi|292490168|ref|YP_003533063.1| glucose-inhibited division protein GidB [Erwinia amylovora
CFBP1430]
gi|292901170|ref|YP_003540539.1| glucose-inhibited division protein B [Erwinia amylovora ATCC 49946]
gi|291201018|emb|CBJ48157.1| methyltransferase (glucose-inhibited division protein B) [Erwinia
amylovora ATCC 49946]
gi|291555610|emb|CBA24236.1| glucose-inhibited division protein GidB [Erwinia amylovora
CFBP1430]
gi|312174361|emb|CBX82614.1| glucose-inhibited division protein GidB [Erwinia amylovora ATCC
BAA-2158]
Length = 208
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 6/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A ++S +L + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 5 LSALLKTAGISLSDGQKHQLIGYVEMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
+ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 64 LVGDRFIDVGTGPGLPGVPLAIVRPQAH---FTLLDSLGKRIRFLKQVQHELQLANIMPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R+++ D + +RA A L ++ + Q+
Sbjct: 121 QSRVEDFAGEPG-FDGVISRAFASLTDMVSWCRHLPAQQ 158
>gi|145628868|ref|ZP_01784668.1| glucose-inhibited division protein B [Haemophilus influenzae
22.1-21]
gi|144979338|gb|EDJ89024.1| glucose-inhibited division protein B [Haemophilus influenzae
22.1-21]
Length = 184
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + + +S + +++L L KW+K NL S ++ ++H+ DSL V
Sbjct: 1 MKAKLVSLLVQANIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ID+G+G G PG+ +I S + L++S K+ SF+R +++
Sbjct: 61 SPYL-QGDRFIDVGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E Q D + +RA A L + ++ +
Sbjct: 117 VIPVLSRVEE-YQPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|84684649|ref|ZP_01012550.1| glucose-inhibited division protein B [Maritimibacter alkaliphilus
HTCC2654]
gi|84667628|gb|EAQ14097.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2654]
Length = 206
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 67/159 (42%), Positives = 95/159 (59%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ + L +VSRET +L+ F L KW++ INLVS+ST++D W RH DS ++ L
Sbjct: 1 MSKSAFLEAVSVSRETERRLDTFAELLTKWNRHINLVSASTLKDLWSRHFLDSAQLLSLA 60
Query: 70 PYPSI-WIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKV 127
S W+D+G+GGGFPGI+ +I + + L V IES +KA+FLR V ++ +V
Sbjct: 61 EGRSRLWLDVGTGGGFPGIVVAIIAAEAQPDLRVRCIESDQRKATFLRTVARECGVSVEV 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ A M DVISARALA LD LL Y+ L
Sbjct: 121 LSERVERADPM--NADVISARALAPLDDLLAYAQRHLKP 157
>gi|229530213|ref|ZP_04419602.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
12129(1)]
gi|229332346|gb|EEN97833.1| ribosomal RNA small subunit methyltransferase G [Vibrio cholerae
12129(1)]
Length = 210
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI ++ E L++S K+ FL+ V+ +
Sbjct: 67 LVGERFIDVGTGPGLPGIPLAVMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A + ++ +
Sbjct: 124 QSRVEEF-DPESGFDGVLSRAFASMTDMVNWCQHL 157
>gi|85060384|ref|YP_456086.1| glucose-inhibited division protein B [Sodalis glossinidius str.
'morsitans']
gi|123518618|sp|Q2NQ94|RSMG_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84780904|dbj|BAE75681.1| glucose inhibited division protein B [Sodalis glossinidius str.
'morsitans']
Length = 206
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 6/160 (3%)
Query: 11 RANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R LL + ++ EKL + L KW+K NL S + E +RH+ DS+ V
Sbjct: 4 RLESLLAQADMALTSAQKEKLLGYVALLHKWNKAYNLTSVRSPEQMLVRHIMDSI-VVNP 62
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 63 HLRGDRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRICFLRQVQHELGLDNITA 119
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
E+ D + +RA A L +L + +++
Sbjct: 120 VQSRVESFAPPAGFDGVISRAFASLGDMLTWCAALPRKEE 159
>gi|254713537|ref|ZP_05175348.1| 16S rRNA methyltransferase GidB [Brucella ceti M644/93/1]
gi|254716108|ref|ZP_05177919.1| 16S rRNA methyltransferase GidB [Brucella ceti M13/05/1]
gi|261217879|ref|ZP_05932160.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M13/05/1]
gi|261321271|ref|ZP_05960468.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M644/93/1]
gi|260922968|gb|EEX89536.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M13/05/1]
gi|261293961|gb|EEX97457.1| ribosomal RNA small subunit methyltransferase G [Brucella ceti
M644/93/1]
Length = 213
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 67/146 (45%), Positives = 90/146 (61%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIKSMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|163742612|ref|ZP_02149998.1| glucose-inhibited division protein B [Phaeobacter gallaeciensis
2.10]
gi|161384197|gb|EDQ08580.1| glucose-inhibited division protein B [Phaeobacter gallaeciensis
2.10]
Length = 204
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 64/148 (43%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET ++L+++ L KWS KINL++ ST++D W RH+ DS+++ Q +P W+D+G
Sbjct: 10 HVSRETYDRLKHYESLVKKWSPKINLIAKSTLDDVWDRHIVDSVQICQGIDFPQTWLDIG 69
Query: 80 SGGGFPGIITSIQLSSIEGGLV-NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFPG++ +I + V LIES +K +FLR +++ + KV + RI++ P M
Sbjct: 70 SGGGFPGVVIAILAAERAPDCVITLIESDQRKCAFLRTAIRECGVKAKVVSERIEKVPPM 129
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
D+ISARALADL TLL ++ L
Sbjct: 130 A--ADIISARALADLTTLLGFAERHLQP 155
>gi|209696453|ref|YP_002264384.1| 16S rRNA methyltransferase GidB [Aliivibrio salmonicida LFI1238]
gi|208010407|emb|CAQ80753.1| methyltransferase GidB (glucose inhibited division protein B)
[Aliivibrio salmonicida LFI1238]
Length = 209
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
VS E+L + L KW+K NL S + I+H+ DS+ V + +ID+
Sbjct: 17 LTVSELQKEQLLGYVALLHKWNKAYNLTSVRNPSEMVIKHILDSI-VVSPNLSGERFIDV 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G G PGI +I L++S K+ F++ V+ + R+++ Q
Sbjct: 76 GTGPGLPGIPLAIMNPE---KSFTLLDSLGKRIRFIKQVIHELKITNVTPIQSRVEDF-Q 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
D + +RA A + ++ + +
Sbjct: 132 PEEKFDAVLSRAFASMTDMVNWCHHLPKE 160
>gi|332289272|ref|YP_004420124.1| 16S rRNA methyltransferase GidB [Gallibacterium anatis UMN179]
gi|330432168|gb|AEC17227.1| 16S rRNA methyltransferase GidB [Gallibacterium anatis UMN179]
Length = 206
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 11 RANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + LL ++S + +L L KW+K NL S ++ ++H+ DSL V +
Sbjct: 4 KLDSLLRQADISLTDQQKSQLVKLVELLHKWNKAYNLTSVRDPQEMLVKHILDSLVVSRY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PG+ +I L++S K+ SF+R V++ +
Sbjct: 64 L-VGERFIDVGTGPGLPGLPLAIANPD---KTFYLLDSLGKRISFIRNAVRELGLTNVEP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A L + ++
Sbjct: 120 VLSRVEE-YQPEQKFDGVLSRAFASLADMTQWCRHL 154
>gi|310765905|gb|ADP10855.1| 16S rRNA methyltransferase GidB [Erwinia sp. Ejp617]
Length = 208
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S ++L + + KW+K NL S + +RH+ DS+ V + H +ID
Sbjct: 13 GIPLSDSQKQQLVGYVGMLHKWNKAYNLTSVRDPQQMLVRHILDSI-VVEPHLVGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I L++S K+ FL+ V R+++
Sbjct: 72 VGTGPGLPGVPLAIVRPQAH---FTLLDSLGKRVRFLKQVQHDLKLANITPVQSRVEDFA 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 129 GE-PPFDGVISRAFASLTDMVSWCHHL 154
>gi|269798906|ref|YP_003312806.1| methyltransferase GidB [Veillonella parvula DSM 2008]
gi|269095535|gb|ACZ25526.1| methyltransferase GidB [Veillonella parvula DSM 2008]
Length = 250
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLG 79
+ E + +Y ++ +K +NL + +++ I+H+ DSL + ++ ID+G
Sbjct: 31 TEEQAKDFYLYYVHMIETNKYLNLTGITNMKEVVIKHMIDSLSCYDSEIIKSGMTIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
+G GFPGI +I S++ V L +S K+ +FL V+ + R ++
Sbjct: 91 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLNFLESVIDELKLTNCTTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKE 177
>gi|319409463|emb|CBI83112.1| glucose inhibited division protein B [Bartonella schoenbuchensis
R1]
Length = 215
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 61/136 (44%), Positives = 87/136 (63%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET+E L F L ++W+K+INL+S++TV W RH+ DS +++ LH W D G
Sbjct: 18 SVSRETVENLMRFESLVIQWNKRINLISTATVPVLWTRHILDSAQIYPLHNQCLHWCDFG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFP I+ +I L + +GG ++L+ES KK +FLR V+ V CRI++ Q I
Sbjct: 78 SGGGFPAIVIAIFLKNRKGGHIDLVESNGKKVAFLRTVIAHLDLPATVHHCRIEDVYQKI 137
Query: 140 TTCDVISARALADLDT 155
+VI+AR LA LD
Sbjct: 138 NKPEVITARGLASLDV 153
>gi|33151284|ref|NP_872637.1| glucose-inhibited division protein B [Haemophilus ducreyi 35000HP]
gi|55976490|sp|Q7VPP8|RSMG_HAEDU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33147504|gb|AAP95026.1| glucose inhibited division protein B [Haemophilus ducreyi 35000HP]
Length = 203
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + ++ E+L F L KW+K NL S E+ ++H+ DSL V
Sbjct: 1 MKQKLDRLLVQADIQLTERQKEQLIGFVHLLHKWNKAYNLTSVRDPEEMLVKHIMDSL-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+H +ID+G+G G PGI +I + L++S K+ +F++ V+++ A
Sbjct: 60 VSVHLQGQSFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKQVLRELAITN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R+++ D + +RA A LD +L +
Sbjct: 117 VTPVLSRVEQY--TARQFDGVLSRAFASLDDMLNWC 150
>gi|238018232|ref|ZP_04598658.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
gi|237864703|gb|EEP65993.1| hypothetical protein VEIDISOL_00056 [Veillonella dispar ATCC 17748]
Length = 250
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLG 79
+ E + +Y ++ +K +NL + +++ ++H+ DSL + + ID+G
Sbjct: 31 TEEQAKDFYVYYARMIETNKYLNLTGITDMKEVVVKHMIDSLSCYDPHIIKSGMSIIDVG 90
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
+G GFPGI +I S++ V L +S K+ +FL ++ + R ++
Sbjct: 91 TGAGFPGIPLAIYDRSLK---VTLFDSLKKRLTFLESIMDELQLTNCTTLHGRAEDLSHQ 147
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D+ ++RA+A L LLE++ P++ +
Sbjct: 148 DYRESFDIATSRAVARLPILLEWTVPYVKE 177
>gi|77361914|ref|YP_341489.1| glucose-inhibited division protein B [Pseudoalteromonas
haloplanktis TAC125]
gi|123589146|sp|Q3IK40|RSMG_PSEHT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76876825|emb|CAI88047.1| putative S-adenosyl-L-methionine-dependent methyltransferase
domain, could be a tRNA or lipid methylase
[Pseudoalteromonas haloplanktis TAC125]
Length = 206
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++ + ++L + L KW+K NL S E+ ++H+ DSL V P +ID
Sbjct: 14 NIALTEKQQQQLVRYVELLTKWNKAYNLTSVRLPEEMMVKHIMDSLVVAPHLP-GHHYID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PGI+ +I L + L++S K+ FL +V + R++E
Sbjct: 73 VGTGPGLPGIVLAIALPNTH---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEE-Y 128
Query: 137 QMITTCDVISARALADLDTLLEYS 160
Q D + +RA A L ++++
Sbjct: 129 QPSVKLDGVLSRAFASLQDMVDWC 152
>gi|262273122|ref|ZP_06050939.1| ribosomal RNA small subunit methyltransferase G [Grimontia hollisae
CIP 101886]
gi|262222878|gb|EEY74186.1| ribosomal RNA small subunit methyltransferase G [Grimontia hollisae
CIP 101886]
Length = 204
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + +KL + + KW+K NL S D ++H+ DS+ V
Sbjct: 1 MKQRLAQLIEQAGMQIPADQQDKLIGYVEMLHKWNKAYNLTSVRDPNDMIVKHIMDSIVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +ID+G+G G PGI +I L++S K+ F+R V+ +
Sbjct: 61 SEYLD-GHHYIDVGTGPGLPGIPLAIINP---VKSFTLLDSLGKRIRFIRQVLHELKITN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ Q D + +RA A + ++ +
Sbjct: 117 VTAVQSRVEDF-QPEQGFDGVLSRAFASMSDMVNWCHHL 154
>gi|88860626|ref|ZP_01135263.1| glucose-inhibited division protein B [Pseudoalteromonas tunicata
D2]
gi|88817221|gb|EAR27039.1| glucose-inhibited division protein B [Pseudoalteromonas tunicata
D2]
Length = 206
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 9 ILRANYLL--NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + N LL + +++ ++L + L KW+K NL S + ++H+ DSL V
Sbjct: 3 LEKLNQLLAQTSIELTQLQKQQLVKYVELLNKWNKAYNLTSVRDPNEMMVKHILDSLVVA 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P +ID+G+G G PG++ +I L + L++S K+ FL V +
Sbjct: 63 PHLP-GKHYIDVGTGPGLPGVVLAIALPDTQ---FILLDSLGKRVRFLTQVKHELGLSNI 118
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R+++ Q D + +RA A L ++++ +
Sbjct: 119 SPVQSRVEDF-QPPVKLDGVLSRAFASLQDMVDWCSHLI 156
>gi|223041388|ref|ZP_03611592.1| glucose-inhibited division protein B [Actinobacillus minor 202]
gi|223017778|gb|EEF16184.1| glucose-inhibited division protein B [Actinobacillus minor 202]
Length = 204
Score = 164 bits (415), Expect = 4e-39, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 8 SILRANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + + LL N+S + ++L F L KW+K NL S ++ ++H+ DSL V
Sbjct: 1 MLAKLDRLLTQANISLTDQQKQQLVDFVKLLDKWNKAYNLTSVRNPDEMLVKHIMDSLVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Q H +ID+G+G G PGI +I + L++S K+ +F++ +++
Sbjct: 61 SQ-HLQGQQFIDVGTGPGLPGIPLAIANPDKQ---FVLLDSLGKRITFIKNAIRELKLTN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E + D + +RA A L+ ++++ +
Sbjct: 117 VTPVLSRVEEYQE--QQFDGVLSRAFASLNDMVDWCYHL 153
>gi|242241379|ref|YP_002989560.1| methyltransferase GidB [Dickeya dadantii Ech703]
gi|242133436|gb|ACS87738.1| methyltransferase GidB [Dickeya dadantii Ech703]
Length = 206
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 6/154 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L L ++ + + L + L KW+K NL S E IRH+ DSL V
Sbjct: 3 QKLDRLLQLAGMALTDKQKDLLIRYVGLLHKWNKAYNLTSVREPEQMLIRHIMDSLVVAP 62
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ID+G+G G PG+ SI L L++S K+ FLR V + +
Sbjct: 63 YL-AGKRFIDVGTGPGLPGVPLSIVLPDAH---FVLLDSLGKRVRFLRQVQHELQLTNIE 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R+++ P D + +RA A L ++++
Sbjct: 119 PVQSRVEDYPSE-PPFDGVISRAFASLQDMVDWC 151
>gi|163737992|ref|ZP_02145408.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
gi|161388608|gb|EDQ12961.1| coproporphyrinogen III oxidase [Phaeobacter gallaeciensis BS107]
Length = 204
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 66/148 (44%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET ++L+++ L KWS KINL++ ST++D W RH+ DS+++ Q +P W+D+G
Sbjct: 10 HVSRETYDRLKHYESLVKKWSPKINLIAKSTLDDVWDRHIVDSVQICQGMDFPQTWLDIG 69
Query: 80 SGGGFPGIITSIQLSSIEGGLV-NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFPG++ +I + V LIES +K +FLR +++ A KV + RI++ P M
Sbjct: 70 SGGGFPGVVVAILAAERAPDCVITLIESDQRKCAFLRTAIRECGANAKVVSERIEKVPPM 129
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
DVISARALADL TLL ++ L
Sbjct: 130 A--ADVISARALADLTTLLGFAERHLQP 155
>gi|254491148|ref|ZP_05104329.1| methyltransferase GidB [Methylophaga thiooxidans DMS010]
gi|224463661|gb|EEF79929.1| methyltransferase GidB [Methylophaga thiooxydans DMS010]
Length = 211
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ + + ++L + L KW+K NL S RH+ DSL V
Sbjct: 10 LQQGCESLGIALGHDQQQQLLRYVALMHKWNKVYNLTSVRDPAQMMSRHIIDSLSVLPYL 69
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
PS +D+G+GGG PGI +I V L++S +KK FL+ V + V
Sbjct: 70 NAPS-LLDVGTGGGLPGIPAAIAYPD---SAVTLLDSNSKKTRFLQQVKAELGLSNVTVV 125
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R+++ ++ +I+ARA A +D ++E +
Sbjct: 126 HGRVEQVS--LSKFAIITARAFASIDDIIELA 155
>gi|293393680|ref|ZP_06637989.1| glucose inhibited division protein B [Serratia odorifera DSM 4582]
gi|291423802|gb|EFE97022.1| glucose inhibited division protein B [Serratia odorifera DSM 4582]
Length = 206
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L + ++ ++L + + KW+K NL S + IRH+ DS+ V
Sbjct: 1 MDKKLDSLLAAAGISLPDRQKQQLLGYVGMLDKWNKAYNLTSVRDPQQMLIRHILDSI-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 60 VNPHLAGMRFIDVGTGPGLPGIPLAIVRPDAH---FTLLDSLGKRVRFLRQVQHELGLNN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++ D + +RA A L +L +
Sbjct: 117 IEPVQSRVEAFVAE-PPFDGVISRAFASLQDMLAWCHHL 154
>gi|312144697|ref|YP_003996143.1| methyltransferase GidB [Halanaerobium sp. 'sapolanicus']
gi|311905348|gb|ADQ15789.1| methyltransferase GidB [Halanaerobium sp. 'sapolanicus']
Length = 243
Score = 164 bits (415), Expect = 5e-39, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
MK + + + LN ++ S++ LE+L +Y F +KK NL S + E+ +H
Sbjct: 1 MKKNKVDFVDKLETGLNQLDIYYSQQQLEQLWEYYCFFETENKKYNLSSITKAEEVIKKH 60
Query: 59 VEDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL + W+D+G+G GFPG++ + L G L++S KK +FL+
Sbjct: 61 FLDSLVILNHLDLTGKKSWLDIGTGAGFPGLVLKLFLP---GDSFYLLDSSAKKINFLKQ 117
Query: 117 VVQKTAARG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ K +G + R ++ + + D +++RA+A L+ LLEY+ P+L
Sbjct: 118 LSYKLDLQGIRATHGRAEDLAKADGWRASFDHVTSRAVASLNILLEYTVPFLK 170
>gi|145632754|ref|ZP_01788488.1| glucose-inhibited division protein B [Haemophilus influenzae 3655]
gi|144986949|gb|EDJ93501.1| glucose-inhibited division protein B [Haemophilus influenzae 3655]
Length = 203
Score = 163 bits (414), Expect = 5e-39, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V +ID
Sbjct: 13 NIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVTPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ +
Sbjct: 128 QPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|330812745|ref|YP_004357207.1| glucose inhibited division protein B methyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327380853|gb|AEA72203.1| putative glucose inhibited division protein B methyltransferase
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 211
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +++ +L + L +KW+K NL + ++ RH+ DSL V
Sbjct: 10 LSTGARQLGVSLTEAQHAQLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFV 69
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
W+D+GSGGG PGI +I + V ++S KK FL V + +V
Sbjct: 70 -ENGRWLDVGSGGGMPGIPLAILFPDSQ---VTCLDSNGKKTRFLTQVKLELKLDNLQVI 125
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ A Q + I +RA + ++ ++
Sbjct: 126 HSRVE-AFQPAEPFNGIISRAFSSMENFSNWTRHL 159
>gi|188580909|ref|YP_001924354.1| methyltransferase GidB [Methylobacterium populi BJ001]
gi|238692888|sp|B1ZGG1|RSMG_METPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|179344407|gb|ACB79819.1| methyltransferase GidB [Methylobacterium populi BJ001]
Length = 211
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 56/153 (36%), Positives = 82/153 (53%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +L +NVSRET + L+ + +W NLV +T+ + W RHV D+L++ + P
Sbjct: 7 SRVLTEHNVSRETAQALDLYVAQLTRWQTVKNLVGPATLSEVWQRHVADALQLLTIAPEA 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+DLGSG G PG+I +I G V L+ES +K +FL + T A V RI
Sbjct: 67 RRWLDLGSGAGIPGLILAIAGRGRSGFHVELVESNARKCAFLSETARLTGAPVTVHNARI 126
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + D++ ARALA L LL +S P L
Sbjct: 127 EAVIGHRSGIDIVCARALAPLTQLLAWSEPLLT 159
>gi|115522413|ref|YP_779324.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris BisA53]
gi|122297909|sp|Q07UP0|RSMG_RHOP5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115516360|gb|ABJ04344.1| methyltransferase GidB [Rhodopseudomonas palustris BisA53]
Length = 231
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
N L VSRET +L+ + L L+W K NL+S +T+ W RH+ DSL+
Sbjct: 11 PPNLAADKAAALRLTPVSRETESRLDAYVALLLQWQAKTNLISPATLPQLWTRHIADSLQ 70
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + P W+D GSGGGFPG++ + ++ + GG V L+E KKA+FLR ++ +
Sbjct: 71 LLTVAPDARTWLDFGSGGGFPGVVLACAMAEL-GGSVTLVERNAKKAAFLREALRVSGGV 129
Query: 125 GKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G+V I + + D I+ARA+A L L+ ++ P L++
Sbjct: 130 GQVILADIGDSVDRFPPHIDCITARAVAPLHQLIGFAEPLLHR 172
>gi|238926482|ref|ZP_04658242.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
gi|238885676|gb|EEQ49314.1| glucose inhibited division protein B [Selenomonas flueggei ATCC
43531]
Length = 240
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL A ++ E + + + + L W+ ++NL + + ED ++H+ DSL +
Sbjct: 6 EILTARAAEAGIPLTAEQVGQFSVYNEMLLDWNTRMNLTALTAPEDVAVKHIIDSLTAYD 65
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L ID+G+G G PGI ++ + V L++S NK+ FL V
Sbjct: 66 AALFDGARTLIDVGTGAGLPGIPLAVYAPHL---TVTLLDSLNKRVRFLMEVTAAMGLPN 122
Query: 126 ----KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A + D+ +RA+A L LLEY+ P++
Sbjct: 123 VRCIHARAEEAARTAEHRAAYDIAVSRAVARLPVLLEYALPFVR 166
>gi|83309102|ref|YP_419366.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Magnetospirillum magneticum AMB-1]
gi|123543729|sp|Q2WBG8|RSMG_MAGMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82943943|dbj|BAE48807.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Magnetospirillum magneticum
AMB-1]
Length = 205
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 63/155 (40%), Positives = 91/155 (58%), Gaps = 7/155 (4%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-Y 71
LL VSRETLE+L + L +KW +INLV TV D W RH+ DS+++F L
Sbjct: 4 EELLTKSGVSRETLERLRLYADLLVKWQARINLVGPDTVPDLWSRHMLDSVQLFPLIKVG 63
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLGSG GFPG++ ++ + V+L+ES ++K +FLR V + T V R
Sbjct: 64 ARRLVDLGSGAGFPGLVLAVMGA----PDVHLVESDSRKCAFLREVARVTETPVTVINKR 119
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
I++ + DV++ARALA LD LL ++FP L +
Sbjct: 120 IEQVAPL--GADVVTARALAPLDRLLGWAFPHLAE 152
>gi|259417839|ref|ZP_05741758.1| 16S rRNA methyltransferase GidB [Silicibacter sp. TrichCH4B]
gi|259346745|gb|EEW58559.1| 16S rRNA methyltransferase GidB [Silicibacter sp. TrichCH4B]
Length = 205
Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats.
Identities = 66/154 (42%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +VSRET E+LE F + KW+ KINLVS ++ED W RH+ DS++VF++ P
Sbjct: 4 ELVREYSDVSRETFERLEVFSEVLTKWNPKINLVSRKSLEDLWTRHILDSVQVFEIAPNA 63
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
W+D+GSGGG PG+I +I + V L+ES +K +FLR ++ + V + R
Sbjct: 64 KTWLDIGSGGGLPGVIVAILAADKSPETKVTLMESDQRKCAFLRNAARECDVQVTVKSQR 123
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I+EA + V+SARALADLD LL YS L
Sbjct: 124 IEEAE--PESAGVMSARALADLDILLGYSERHLK 155
>gi|332533708|ref|ZP_08409567.1| ribosomal RNA small subunit methyltransferase G [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036872|gb|EGI73333.1| ribosomal RNA small subunit methyltransferase G [Pseudoalteromonas
haloplanktis ANT/505]
Length = 206
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++ + ++L + L KW+K NL S E+ I+H+ DSL V P +ID+
Sbjct: 15 IALTEKQQQQLVRYVELLDKWNKAYNLTSVRLPEEMMIKHIMDSLVVAPHLP-GHHYIDV 73
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G G PGI+ +I L + + L++S K+ FL +V + R++E Q
Sbjct: 74 GTGPGLPGIVLAIALPNTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEE-YQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D + +RA A L ++++ +
Sbjct: 130 PSVKLDGVLSRAFASLQDMVDWCSHLI 156
>gi|256425869|ref|YP_003126522.1| methyltransferase GidB [Chitinophaga pinensis DSM 2588]
gi|256040777|gb|ACU64321.1| methyltransferase GidB [Chitinophaga pinensis DSM 2588]
Length = 207
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWID 77
+ + L++L+ L+ +W++KIN++S ++ + +HV SL + + +P+ +D
Sbjct: 10 DFTDTQLQQLQALSGLYQEWNEKINVISRKDIDALYEKHVLHSLSIAAVADFPNGMQILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK + V + + F R+++
Sbjct: 70 LGTGGGFPGIPLAIFFPEVQ---FHLVDSIGKKIKVVEGVSEALGLKNVTFKHSRVEDIK 126
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
D++ +RA+A L L +S P L +
Sbjct: 127 DR--KFDLVVSRAVAPLKDLWRWSKPVLKK 154
>gi|56461729|ref|YP_157010.1| 16S rRNA methyltransferase GidB [Idiomarina loihiensis L2TR]
gi|81600227|sp|Q5QZI9|RSMG_IDILO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56180739|gb|AAV83461.1| Predicted S-adenosylmethionine-dependent methyltransferase
[Idiomarina loihiensis L2TR]
Length = 206
Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ N+S +E+ L KW+K NL S +D RH+ DSL V Q
Sbjct: 5 LKGLLDQAQINLSEAQIEQQLALVGLLDKWNKAYNLTSVRNPKDMLTRHIMDSLAVRQYL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ +ID+G+G G PG+ +I E L++S K+ F+R V +
Sbjct: 65 -HGQRFIDVGTGPGLPGLPLAIAEPDNE---FVLLDSLGKRIRFIRQVCHELKLTNVTAV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ Q D + +RA A L+ +L +
Sbjct: 121 QARVED-YQDEKQFDGVISRAFASLNDMLSWCEHL 154
>gi|145636245|ref|ZP_01791914.1| glucose-inhibited division protein B [Haemophilus influenzae
PittHH]
gi|145270410|gb|EDK10344.1| glucose-inhibited division protein B [Haemophilus influenzae
PittHH]
Length = 203
Score = 163 bits (413), Expect = 7e-39, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V +ID
Sbjct: 13 NIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVTPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ +
Sbjct: 128 QPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|26986748|ref|NP_742173.1| 16S rRNA methyltransferase GidB [Pseudomonas putida KT2440]
gi|148550505|ref|YP_001270607.1| 16S rRNA methyltransferase GidB [Pseudomonas putida F1]
gi|60392324|sp|P0A124|RSMG_PSEPK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|60392325|sp|P0A125|RSMG_PSEPU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|166224604|sp|A5WBB3|RSMG_PSEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24981338|gb|AAN65637.1|AE016190_3 glucose-inhibited division protein B [Pseudomonas putida KT2440]
gi|581464|emb|CAA44420.1| unnamed protein product [Pseudomonas putida]
gi|148514563|gb|ABQ81423.1| methyltransferase GidB [Pseudomonas putida F1]
Length = 216
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L ++ E EKL + L +KW+K NL + ++ RH+ DSL V
Sbjct: 13 LSTGARQLGVELTAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFI 72
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H W+D+GSGGG PGI +I V ++++ KK FL V + V
Sbjct: 73 HNDRDNWLDVGSGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTV 129
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ A Q D I +RA + ++ ++
Sbjct: 130 IHSRVE-AFQPAQPFDGIISRAFSSMENFTNWTRHL 164
>gi|227113931|ref|ZP_03827587.1| glucose-inhibited division protein B [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 206
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 12 ANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LLN + S + L + + KW+K NL S + +RH+ DS+ V + H
Sbjct: 5 LDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLVRHIMDSI-VVEPH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ +ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LHGQRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELQLENITPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ P D + +RA A L ++ +
Sbjct: 121 QSRVEAFPAE-PPFDGVISRAFASLQDMISWCSHL 154
>gi|16272434|ref|NP_438647.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae Rd KW20]
gi|68249089|ref|YP_248201.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae 86-028NP]
gi|145630331|ref|ZP_01786112.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|148827683|ref|YP_001292436.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae PittGG]
gi|260580449|ref|ZP_05848277.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae RdAW]
gi|260582247|ref|ZP_05850040.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae NT127]
gi|319775586|ref|YP_004138074.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3047]
gi|329122368|ref|ZP_08250955.1| glucose inhibited division protein B [Haemophilus aegyptius ATCC
11116]
gi|1169897|sp|P44728|RSMG_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81336505|sp|Q4QN56|RSMG_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224593|sp|A5UGZ7|RSMG_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1573466|gb|AAC22146.1| glucose-inhibited division protein (gidB) [Haemophilus influenzae
Rd KW20]
gi|68057288|gb|AAX87541.1| methyltransferase GidB [Haemophilus influenzae 86-028NP]
gi|144984066|gb|EDJ91503.1| glucose-inhibited division protein B [Haemophilus influenzae R3021]
gi|148718925|gb|ABR00053.1| glucose-inhibited division protein B [Haemophilus influenzae
PittGG]
gi|260092791|gb|EEW76726.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae RdAW]
gi|260094615|gb|EEW78510.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae NT127]
gi|301169207|emb|CBW28804.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae 10810]
gi|317450177|emb|CBY86393.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
influenzae F3047]
gi|327473650|gb|EGF19069.1| glucose inhibited division protein B [Haemophilus aegyptius ATCC
11116]
Length = 203
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V +ID
Sbjct: 13 NIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVTPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ +
Sbjct: 128 QPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|148825234|ref|YP_001289987.1| 16S rRNA methyltransferase GidB [Haemophilus influenzae PittEE]
gi|229846574|ref|ZP_04466682.1| glucose-inhibited division protein B [Haemophilus influenzae
7P49H1]
gi|166224592|sp|A5UA03|RSMG_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148715394|gb|ABQ97604.1| glucose-inhibited division protein B [Haemophilus influenzae
PittEE]
gi|229810667|gb|EEP46385.1| glucose-inhibited division protein B [Haemophilus influenzae
7P49H1]
Length = 203
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V +ID
Sbjct: 13 NIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNATPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ + +
Sbjct: 128 QPEDKFDGVLSRAFASLKDMTDWCYHLPKE 157
>gi|75910084|ref|YP_324380.1| 16S rRNA methyltransferase GidB [Anabaena variabilis ATCC 29413]
gi|123608498|sp|Q3M6A1|RSMG_ANAVT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|75703809|gb|ABA23485.1| 16S rRNA m(7)G-527 methyltransferase [Anabaena variabilis ATCC
29413]
Length = 245
Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-------RVFQLHP 70
+ + + + Y L L+ ++++NL + ++FW +H+ DSL ++ P
Sbjct: 17 NWQPTDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISFLP 76
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ ID+G+G GFPG+ +I + + L++S KK +F+ ++++ K
Sbjct: 77 VGASVIDIGTGAGFPGVPVAIIAPN---STMTLVDSTRKKIAFIESILKELGLTNAKTLV 133
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E PQ DV RA+ EY+ P L
Sbjct: 134 SRAEEIGQQPQHREQYDVALIRAVGTASACAEYTLPLLK 172
>gi|119471637|ref|ZP_01614022.1| glucose-inhibited division protein B [Alteromonadales bacterium
TW-7]
gi|119445416|gb|EAW26703.1| glucose-inhibited division protein B [Alteromonadales bacterium
TW-7]
Length = 206
Score = 162 bits (412), Expect = 9e-39, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
+++ + ++L + L KW+K NL S ++ ++H+ DSL V P +ID+
Sbjct: 15 ISLTDKQQQQLVRYVELLDKWNKAYNLTSVRLPQEMMVKHIMDSLVVAPHLP-GHHYIDV 73
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G G PGI+ +I L + + L++S K+ FL +V + R++E Q
Sbjct: 74 GTGPGLPGIVLAIALPNTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEE-YQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D + +RA A L ++++ +
Sbjct: 130 PSVKLDGVLSRAFASLQDMVDWCSHLI 156
>gi|145638597|ref|ZP_01794206.1| glucose-inhibited division protein B [Haemophilus influenzae
PittII]
gi|145272192|gb|EDK12100.1| glucose-inhibited division protein B [Haemophilus influenzae
PittII]
gi|309750098|gb|ADO80082.1| 16S rRNA 7-methylguanosine methyltransferase GidB [Haemophilus
influenzae R2866]
Length = 203
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V L+ +ID
Sbjct: 13 NIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSL-VVSLYLQGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLTNVTPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ +
Sbjct: 128 QPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|325275322|ref|ZP_08141275.1| 16S rRNA methyltransferase GidB [Pseudomonas sp. TJI-51]
gi|324099570|gb|EGB97463.1| 16S rRNA methyltransferase GidB [Pseudomonas sp. TJI-51]
Length = 216
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQL 68
L +S E EKL + L +KW+K NL + ++ RH+ DSL V +
Sbjct: 13 LSTGARQLGVELSAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMAFI 72
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H W+D+GSGGG PGI +I V ++++ KK FL V + V
Sbjct: 73 HSARDNWLDVGSGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTV 129
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ A Q D I +RA + ++ ++
Sbjct: 130 IHSRVE-AFQPAQPFDGIISRAFSSMENFTNWTRHL 164
>gi|39938753|ref|NP_950519.1| 16S rRNA methyltransferase GidB [Onion yellows phytoplasma OY-M]
gi|55976448|sp|Q6YQV6|RSMG_ONYPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39721862|dbj|BAD04352.1| S-adenosylmethionine-dependent [Onion yellows phytoplasma OY-M]
Length = 212
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L L + + ++ + L K ++Y + ++K+NL S ++ D +H DSL + ++
Sbjct: 1 MLYFESLKDKFALNEKQLNKFVFYYEFLKQENQKMNLTSIISLSDVCYKHFYDSLILKEI 60
Query: 69 HPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ ++ D+ SG GFP I ++ + +IES KK +FL+ +
Sbjct: 61 FNFNTVTNLCDVDSGAGFPSFPLKILFPHLK---IVIIESSLKKINFLKQLSSHLELDNI 117
Query: 127 V-FACRIQEAP-QMITTCDVISARALADLDTLLEYSFPWLYQK 167
F R+++ + D + ARALA L+ +L++ P + +K
Sbjct: 118 CFFHQRVEQYDIAKNGSYDCVVARALARLELILKWCVPLVKKK 160
>gi|261823730|ref|YP_003261836.1| 16S rRNA methyltransferase GidB [Pectobacterium wasabiae WPP163]
gi|261607743|gb|ACX90229.1| methyltransferase GidB [Pectobacterium wasabiae WPP163]
Length = 206
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 12 ANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ LLN + S + L + + KW+K NL S + IRH+ DS+ V + H
Sbjct: 5 LDNLLNAAGIVISDKQKNLLIQYVDMLNKWNKAYNLTSVRDPQQMLIRHIMDSI-VVESH 63
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I L++S K+ FLR V +
Sbjct: 64 LSGQRFIDVGTGPGLPGIPLAIVRPESH---FTLLDSLGKRVRFLRQVQHELQLENITPV 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++ P D + +RA A L ++ +
Sbjct: 121 QSRVEAFPAE-PPFDGVISRAFASLQDMISWC 151
>gi|90023651|ref|YP_529478.1| glucose inhibited division protein B [Saccharophagus degradans
2-40]
gi|122995697|sp|Q21DG3|RSMG_SACD2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89953251|gb|ABD83266.1| methyltransferase GidB [Saccharophagus degradans 2-40]
Length = 223
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + + +L + LF KW+K NL + E + +H+ DSL + H +ID
Sbjct: 24 ELTLSEQQVNQLLDYLELFEKWNKAYNLSAIRDAEGMFTKHLLDSLSIAP-HLTGERFID 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PGI +I L++S KK FL V Q R E Q
Sbjct: 83 VGTGGGLPGIPMAICFPQRH---FTLLDSAGKKVRFLFQVKQALGLSNVDTQNRRVETFQ 139
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
D + +RA A + +L + ++
Sbjct: 140 PQPQFDGVISRAFASITYMLTWCNHLIHD 168
>gi|149911788|ref|ZP_01900392.1| glucose-inhibited division protein B [Moritella sp. PE36]
gi|149805134|gb|EDM65156.1| glucose-inhibited division protein B [Moritella sp. PE36]
Length = 206
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 11 RANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R + LL ++ + ++L L KW+K NL S E+ I+H+ DSL V
Sbjct: 4 RLDALLAQTSLVVTDTQKQQLVALVNLLHKWNKAYNLTSVRDPENMLIKHIMDSLVVSPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
+ID+G+G G PG+ +I E L++S K+ F+ V +
Sbjct: 64 L-EGERFIDVGTGPGLPGLPLAIMNPDKE---FVLLDSLGKRIRFVTQAVHELKLTNVTP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++E I D + +RA A L+ +L +
Sbjct: 120 VQSRVEEYHPEI-KFDGVLSRAFASLEDMLHWC 151
>gi|329113881|ref|ZP_08242652.1| Ribosomal RNA small subunit methyltransferase G [Acetobacter
pomorum DM001]
gi|326696891|gb|EGE48561.1| Ribosomal RNA small subunit methyltransferase G [Acetobacter
pomorum DM001]
Length = 198
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 64/152 (42%), Positives = 87/152 (57%), Gaps = 6/152 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+VSRET E+L F L KW+ +INLVSS +E+ W RHV DSL++ L S +
Sbjct: 5 PEGVHVSRETEERLSAFVSLLEKWNPRINLVSSKDIENVWSRHVLDSLQLVPLIQGQSRF 64
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+GSGGGFP ++ I G LIES +KA+FLR + T +V CR++
Sbjct: 65 IDMGSGGGFPAVVVGIAT----GIPGVLIESDQRKAAFLREAARLTQTDLEVLPCRLESV 120
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V++ARALA L LLE++ P L K
Sbjct: 121 K--VQPAPVVTARALAPLVKLLEWAHPLLQPK 150
>gi|301155224|emb|CBW14689.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Haemophilus
parainfluenzae T3T1]
Length = 203
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L ++ + ++L L KW+K NL S ++ ++H+ DS+ V
Sbjct: 1 MKAKLENLLAQAEIQLTDQQKDQLIQLVQLLNKWNKAYNLTSVRDPQEMLVKHILDSIVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ID+G+G G PG+ +I + + L++S K+ SF+R V++
Sbjct: 61 SPYL-QGEHFIDVGTGPGLPGLPLAIINPTKQ---FVLLDSLGKRISFIRNAVRELGLTN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E Q D + +RA A L + ++
Sbjct: 117 VEPVLSRVEE-YQPEQKFDGVLSRAFASLKDMTDWCHHL 154
>gi|170724366|ref|YP_001752054.1| 16S rRNA methyltransferase GidB [Pseudomonas putida W619]
gi|193806450|sp|B1JFV1|RSMG_PSEPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169762369|gb|ACA75685.1| methyltransferase GidB [Pseudomonas putida W619]
Length = 216
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QL 68
L +S E E+L + L +KW+K NL + ++ RH+ DSL V +
Sbjct: 13 LSTGARQLGVELSAEQHERLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMGFI 72
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
HP W+D+GSGGG PGI +I V ++++ KK FL V + V
Sbjct: 73 HPDRDSWLDVGSGGGMPGIPLAILHPQKR---VTVLDANGKKTRFLTQVKMELKLDNLTV 129
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ A Q + I +RA + ++ ++
Sbjct: 130 IHSRVE-AFQPAQPFNGIISRAFSSMENFTNWTRHL 164
>gi|270308089|ref|YP_003330147.1| methyltransferase [Dehalococcoides sp. VS]
gi|270153981|gb|ACZ61819.1| methyltransferase [Dehalococcoides sp. VS]
Length = 235
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWI 76
+S LE+ E +Y + ++ ++NL + + +D ++H DS+ + + +
Sbjct: 12 GITLSFVQLEQFETYYRELVDYNSRVNLTAITEYKDVQVKHFLDSVSLVLVGIKGDEKIL 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG GFPG+ I I+ G L+E+ KKA FL + K G ++ + R ++A
Sbjct: 72 DVGSGAGFPGLPLKILFPDIQLG---LLEATQKKARFLSEITAKLGLTGVEIISQRAEDA 128
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPW 163
Q ++++RA+AD+ TL E + P+
Sbjct: 129 AQNPLYRQKYTLVTSRAVADMATLAELTLPF 159
>gi|182678270|ref|YP_001832416.1| methyltransferase GidB [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634153|gb|ACB94927.1| methyltransferase GidB [Beijerinckia indica subsp. indica ATCC
9039]
Length = 221
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/145 (44%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
E E+L + L KW K INLV+ ST++ W RH DSL+V + P W+DLGSGG
Sbjct: 31 PELRERLGLYATLLGKWQKTINLVAPSTLDHVWSRHFADSLQVQEALPQAHHWVDLGSGG 90
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-T 141
GFPG++T+I L+ + V+LIES +K +FLR V ++T A+ V RI+ +I
Sbjct: 91 GFPGLVTAIVLADVPEACVHLIESDQRKCAFLREVARETGAKAIVHCGRIEAVASIIEDG 150
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
+ +SARALA L LL Y+ PWL Q
Sbjct: 151 IEAVSARALAPLVNLLAYAEPWLVQ 175
>gi|329894822|ref|ZP_08270622.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC3088]
gi|328922716|gb|EGG30050.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC3088]
Length = 218
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S + +L + L KW+K NL + +++ ++H+ DSL V + +D+G+G
Sbjct: 23 SAQQQGQLLTYLSLLQKWNKAYNLTAIRDIDEMLVKHILDSLSVAPFCGAATSLLDIGAG 82
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
G P ++ +I G V+ ++S KK F++ V + V R + + T
Sbjct: 83 AGLPSVVLAIVYP---GMRVSGLDSNIKKTRFMQQVGYELNLTNFHVLHARA-DTADLST 138
Query: 141 TCDVISARALADLDTLLEYSFPWL 164
T D++ +RA + + + P L
Sbjct: 139 TFDIVISRAFSSFSDFVTLALPRL 162
>gi|114798745|ref|YP_762233.1| methyltransferase GidB [Hyphomonas neptunium ATCC 15444]
gi|122941980|sp|Q0BWB0|RSMG_HYPNA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114738919|gb|ABI77044.1| methyltransferase GidB [Hyphomonas neptunium ATCC 15444]
Length = 207
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
L +VSRETL++L+ W +K NL+ W RHV DS ++ P
Sbjct: 8 AAFLAANDVSRETLDRLDRVIDTLDVWRQKSNLIGPKEWPQIWTRHVGDSWQLLDHIPET 67
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +DLGSG GFPG+I + G V +IES KK +FLR +Q+ V R+
Sbjct: 68 AHLVDLGSGAGFPGLIIAAAR---SLGHVTMIESVGKKCAFLRAAIQEADLSAAVHQGRV 124
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ AP + ++ARA A L LL+Y+ PWL +
Sbjct: 125 EAAPPIKAEF--VTARAFAPLPELLDYAAPWLRK 156
>gi|254237762|ref|ZP_04931085.1| glucose inhibited division protein B [Pseudomonas aeruginosa C3719]
gi|126169693|gb|EAZ55204.1| glucose inhibited division protein B [Pseudomonas aeruginosa C3719]
Length = 214
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGGNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++ A +
Sbjct: 83 GGGMPGVPLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVE-AFRPE 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|163751412|ref|ZP_02158637.1| glucose-inhibited division protein B [Shewanella benthica KT99]
gi|161328715|gb|EDP99863.1| glucose-inhibited division protein B [Shewanella benthica KT99]
Length = 206
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 8 SILRANYLLN-TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S L YL + + ++L F + KW+K NL S + IRH+ DSL V
Sbjct: 3 SALLGEYLAEMNLTATEQQQQQLVGFVEMLNKWNKAYNLTSVRDPQQMLIRHIMDSLAV- 61
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H +ID+G+G G PGI +I L++S K+ FL+ V
Sbjct: 62 SAHLVGERFIDVGTGPGLPGIPLAIMNPDKH---FVLLDSLGKRIRFLKQVQFNLGIDNI 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA + D + +RA A ++ +L +
Sbjct: 119 SSVESRVEAYEPEEKFDGVLSRAFASIEDMLHWCHHL 155
>gi|256045662|ref|ZP_05448540.1| 16S rRNA methyltransferase GidB [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992084|ref|ZP_06104641.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. Rev.1]
gi|263003150|gb|EEZ15443.1| ribosomal RNA small subunit methyltransferase G [Brucella
melitensis bv. 1 str. Rev.1]
Length = 213
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 66/146 (45%), Positives = 89/146 (60%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET ++L F LF KWSK INL S ST+ D W RH+ DS ++F L + W+D+GS
Sbjct: 17 VSRETADRLIAFEDLFRKWSKAINLASPSTLADLWNRHILDSAQLFPLAKEATRWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGF GI+T+ L+ GG ++L+ES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFRGIVTACFLAERSGGCIDLVESAGKKAAFLRTAAGHLHVPARVHSARIESMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L L + PWL
Sbjct: 137 TPQVVTARALASLGDLFTLAEPWLSD 162
>gi|116053715|ref|YP_794042.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa UCBPP-PA14]
gi|122256265|sp|Q02DE4|RSMG_PSEAB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115588936|gb|ABJ14951.1| glucose inhibited division protein B [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 214
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++ A +
Sbjct: 83 GGGMPGVPLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVE-AFRPE 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|257067214|ref|YP_003153470.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
gi|256799094|gb|ACV29749.1| methyltransferase GidB [Anaerococcus prevotii DSM 20548]
Length = 210
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L+ + NL + + + +H +DSL V +D+G+G GFPGI
Sbjct: 7 IYMDYLLEVNSHTNLTAITDPSEIETKHFKDSLTVLDYIKEGDRVLDIGAGAGFPGIPLR 66
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE-APQMITTCDVISAR 148
I+ + + LI+S NKK F+ V++K + + R ++ A + T DV+ +R
Sbjct: 67 IE----KDIDLTLIDSVNKKVKFMNEVIEKLGLTKARAIHTRAEDFAKEERETYDVVVSR 122
Query: 149 ALADLDTLLEYSFPWLY 165
A+A++ TL EY P L
Sbjct: 123 AVANMATLSEYCLPMLK 139
>gi|300024785|ref|YP_003757396.1| methyltransferase GidB [Hyphomicrobium denitrificans ATCC 51888]
gi|299526606|gb|ADJ25075.1| methyltransferase GidB [Hyphomicrobium denitrificans ATCC 51888]
Length = 219
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +SRETL++L + + +W INLV+ ST+ D W RH DS ++++ P
Sbjct: 11 ESFQAEFGISRETLDRLTTYAQILTRWQATINLVAPSTLGDIWNRHFADSAQLWRFRPPN 70
Query: 73 SI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ W+D+GSG GFPG++ +I + LIES +KA+FLR V + T + R
Sbjct: 71 ARNWLDIGSGAGFPGLVLAIIGAETGATHHILIESDARKAAFLREVARATGITVDILCMR 130
Query: 132 IQ--EAPQMITTCDVISARALADLDTLLEYSFPW 163
I+ E + + D ++ARALA L LLE S P+
Sbjct: 131 IENSETRAKVKSVDCLTARALAPLPRLLEMSAPY 164
>gi|261346699|ref|ZP_05974343.1| 16S rRNA methyltransferase GidB [Providencia rustigianii DSM 4541]
gi|282565099|gb|EFB70634.1| 16S rRNA methyltransferase GidB [Providencia rustigianii DSM 4541]
Length = 207
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 6 SNSILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ I + LL + ++ + ++L + L KW+K NL S E +RH+ DS+
Sbjct: 1 MDLIAKLTKLLAKTDIILTEKQKQQLVDYVGLLNKWNKAYNLTSVRDPELMLVRHIMDSI 60
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V H +ID+G+G G PG+ +I L++S K+ FL+ V +
Sbjct: 61 -VVNDHLKGYKFIDVGTGPGLPGVPLAIVRPDSH---FVLLDSLGKRIRFLKQVQHELGL 116
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E P + D + +RA A L+ +L +
Sbjct: 117 NNIEPVQARVEEYP-VKDGFDGVISRAFASLNDMLSWCHHL 156
>gi|117620993|ref|YP_858689.1| 16S rRNA methyltransferase GidB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166224342|sp|A0KQY8|RSMG_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117562400|gb|ABK39348.1| methyltransferase GidB [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 214
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 8 SILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R N LL + + +L L KW+K NL S + ++H+ DSL V
Sbjct: 1 MLERLNGLLMQAGIVITDTQKTQLVQLVELLHKWNKAYNLTSVRDPDAMLVKHILDSLVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Q H + +ID+G+G G PG+ +I + L++S K+ +F+R V+ +
Sbjct: 61 SQ-HLHGERFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVILELGLTN 116
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q D + +RA A L+ +L +
Sbjct: 117 VTPVKSRVEE-YQPEVGFDGVLSRAFASLEDMLSWCHHL 154
>gi|170739704|ref|YP_001768359.1| methyltransferase GidB [Methylobacterium sp. 4-46]
gi|193806448|sp|B0UJI7|RSMG_METS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168193978|gb|ACA15925.1| methyltransferase GidB [Methylobacterium sp. 4-46]
Length = 212
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +L VSRET L+ + +W NLV +T+ D W RH+ DSL++ P
Sbjct: 7 DRVLAEAGVSRETAAALDLYVAQLTRWQAIKNLVGPATLPDVWTRHIADSLQLLDAAPQA 66
Query: 73 SIWIDLGSGGGFPGIITSIQ----LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
W+DLGSG G PG+I +I + V+L+ES +K +FL+ + T A ++
Sbjct: 67 RTWLDLGSGAGIPGLILAIAGVRNRPDLR---VDLVESNARKGAFLQETARLTGAPARIH 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
RI+ DV+ ARALA L L+ ++ P L
Sbjct: 124 VARIERVVAGFRGVDVVCARALAPLPQLIAWTAPLLK 160
>gi|238921735|ref|YP_002935250.1| 16S rRNA methyltransferase GidB [Edwardsiella ictaluri 93-146]
gi|259495494|sp|C5BF32|RSMG_EDWI9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238871304|gb|ACR71015.1| 16S rRNA methyltransferase GidB, putative [Edwardsiella ictaluri
93-146]
Length = 206
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ + ++L + L KW+K NL S D +RH+ DS+ V +ID
Sbjct: 13 GISLTDQQKQRLLGYVSLLDKWNKAYNLTSVREPRDMLVRHIMDSIVVSPYL-QGLRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G PGI +I L++S K+ FLR V + + R++
Sbjct: 72 VGTGPGLPGIPLAIVRPDAN---FTLLDSLGKRVRFLRQVQHELRLDNIEPVQSRVEAFV 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
D + +RA A L ++ +
Sbjct: 129 AE-PPFDGVISRAFASLQDMVSWCHHL 154
>gi|49078966|gb|AAT49839.1| PA5564 [synthetic construct]
Length = 215
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++ A +
Sbjct: 83 GGGMPGVPLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVE-AFRPE 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|309972357|gb|ADO95558.1| 16S rRNA 7-methylguanosine methyltransferase GidB [Haemophilus
influenzae R2846]
Length = 203
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V +ID
Sbjct: 13 NIKISDQQIQQLINLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELGLTNVTPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ +
Sbjct: 128 QPEDKFDGVLSRAFALLKDMTDWCHHLPKE 157
>gi|83319743|ref|YP_424755.1| 16S rRNA methyltransferase GidB [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|3122152|sp|Q48960|RSMG_MYCCT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|950065|emb|CAA83698.1| methyltransferases [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|83283629|gb|ABC01561.1| methyltransferase gidB [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 231
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIW 75
+ +++E KL +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 12 KNFTINQEIKNKLNLYYQILIEENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
D+G+G GFPGI+ I +I+ + LIES NKK +FL+Y+VQK ++ R +E
Sbjct: 72 ADIGTGAGFPGIVLKIFFPNIK---LTLIESNNKKVNFLKYLVQKLNLNDVEILNKRAEE 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D++ +RA+A L+ +LE +
Sbjct: 129 LNEYKEQFDIVISRAVAYLNIILELGVQLVK 159
>gi|229844352|ref|ZP_04464492.1| glucose-inhibited division protein B [Haemophilus influenzae
6P18H1]
gi|229812601|gb|EEP48290.1| glucose-inhibited division protein B [Haemophilus influenzae
6P18H1]
Length = 203
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + +++L L KW+K NL S ++ ++H+ DSL V +ID
Sbjct: 13 NIKISDQQIQQLIDLVNLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-QGDRFID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I S + L++S K+ SF+R +++ + R++E
Sbjct: 72 VGTGPGLPGLPLAIINPSKQ---FVLLDSLGKRISFIRNAIRELRLINVIPVLSRVEE-Y 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q D + +RA A L + ++ +
Sbjct: 128 QPEDKFDGVLSRAFASLKDMTDWCHHLPKE 157
>gi|153008196|ref|YP_001369411.1| 16S rRNA methyltransferase GidB [Ochrobactrum anthropi ATCC 49188]
gi|166224600|sp|A6WX78|RSMG_OCHA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151560084|gb|ABS13582.1| methyltransferase GidB [Ochrobactrum anthropi ATCC 49188]
Length = 213
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 66/146 (45%), Positives = 88/146 (60%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET +L F LF KWSK INL S ST+ + W RH+ DS ++F L W+D+GS
Sbjct: 17 VSRETANRLIAFEDLFRKWSKAINLASPSTLNELWTRHILDSAQLFPLASDAKHWLDIGS 76
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPGI+T+ L+ GG ++LIES KKA+FLR +V + RI+ + I
Sbjct: 77 GGGFPGIVTACFLAEQPGGAIDLIESAGKKAAFLRTAAGHLHVPARVHSTRIEAMWEKIE 136
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
T V++ARALA L+ L + WL
Sbjct: 137 TPQVVTARALASLNDLFGLTELWLTN 162
>gi|313496412|gb|ADR57778.1| RsmG [Pseudomonas putida BIRD-1]
Length = 216
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L ++ E EKL + L +KW+K NL + ++ RH+ DSL V
Sbjct: 13 LSTGARQLGVELTAEQHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFI 72
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H W+D+GSGGG PGI +I V ++++ KK FL V + V
Sbjct: 73 HNGRDNWLDVGSGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELRLDNLMV 129
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ A Q D I +RA + ++ ++
Sbjct: 130 IHSRVE-AFQPAQPFDGIISRAFSSMENFTNWTRHL 164
>gi|167036427|ref|YP_001671658.1| 16S rRNA methyltransferase GidB [Pseudomonas putida GB-1]
gi|189040710|sp|B0KRB8|RSMG_PSEPG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166862915|gb|ABZ01323.1| methyltransferase GidB [Pseudomonas putida GB-1]
Length = 216
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L +S E EKL + L +KW+K NL + ++ RH+ DSL V
Sbjct: 13 LSTGARQLGVELSAEHHEKLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMSFI 72
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H W+D+GSGGG PGI +I V ++++ KK FL V + V
Sbjct: 73 HNERDNWLDVGSGGGMPGIPLAILHPHKR---VTVLDANGKKTRFLTQVKMELKLDNLTV 129
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ A Q D I +RA + ++ ++
Sbjct: 130 IHSRVE-AFQPAQPFDGIISRAFSSMENFTNWTRHL 164
>gi|15600757|ref|NP_254251.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PAO1]
gi|107104665|ref|ZP_01368583.1| hypothetical protein PaerPA_01005744 [Pseudomonas aeruginosa PACS2]
gi|218894667|ref|YP_002443537.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa LESB58]
gi|254243109|ref|ZP_04936431.1| glucose inhibited division protein B [Pseudomonas aeruginosa 2192]
gi|296392431|ref|ZP_06881906.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PAb1]
gi|20177903|sp|Q9HT10|RSMG_PSEAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725362|sp|B7V7A1|RSMG_PSEA8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|9951905|gb|AAG08949.1|AE004968_3 glucose inhibited division protein B [Pseudomonas aeruginosa PAO1]
gi|126196487|gb|EAZ60550.1| glucose inhibited division protein B [Pseudomonas aeruginosa 2192]
gi|218774896|emb|CAW30714.1| glucose inhibited division protein B [Pseudomonas aeruginosa
LESB58]
Length = 214
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++ A +
Sbjct: 83 GGGMPGVPLAILFPEKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVE-AFRPE 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|309390343|gb|ADO78223.1| 16S rRNA m(7)G-527 methyltransferase [Halanaerobium praevalens DSM
2228]
Length = 243
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
MK + I + + ++S +E LE+L +Y F+ +KK NL + + E +H
Sbjct: 1 MKTNKNEFIAKLKKGIEELDISYSQEQLEQLWEYYLFFISENKKYNLSTITEPEAVITKH 60
Query: 59 VEDSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL + + + W+D+G+G GFPG++ + L G L++S +KK +FL
Sbjct: 61 FLDSLVILKELDFAQHKRWLDIGTGAGFPGMVLKLFLP---GDSFYLLDSASKKVNFLNQ 117
Query: 117 VVQKTAARG-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ K G + R ++ Q + + D + +RA+A L+ LLEY P+L
Sbjct: 118 LIYKLDLTGIEATHARAEDLAQLEDLRASFDYVCSRAVAALNVLLEYVVPFLK 170
>gi|220933186|ref|YP_002510094.1| methyltransferase GidB [Halothermothrix orenii H 168]
gi|219994496|gb|ACL71099.1| methyltransferase GidB [Halothermothrix orenii H 168]
Length = 240
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
MK S + A +++L+ + + +KK NL + ++ +H
Sbjct: 1 MKSNKFYSRIAAGLEAMNIEYQEYMIDQLQDYLKFLKEENKKYNLTALDEPDEIITKHFF 60
Query: 61 DSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DSL + + + +ID+G+G GFPG++ I ++ + L++S K+ +FL+ +
Sbjct: 61 DSLSFLSKFNLKQEKFIDIGTGAGFPGMVIKIFKPGLD---MILLDSLAKRVNFLKKLST 117
Query: 120 KTAA-RGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ + +V R ++ + D + ARA+A ++TL EY+ P +
Sbjct: 118 RLGLKKLEVVHARAEDLARDKIYREGFDWVVARAVAPVNTLSEYTLPLVR 167
>gi|226947203|ref|YP_002802276.1| 16S rRNA methyltransferase GidB [Azotobacter vinelandii DJ]
gi|226722130|gb|ACO81301.1| Glucose inhibited division protein B, gidB [Azotobacter vinelandii
DJ]
Length = 215
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWI 76
+S E+L + L +KW+K NL + ++ RH+ DSL V + W+
Sbjct: 20 GIELSERQREQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVTPQIAEAGDDWL 79
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSGGG PG+ +I G L++S KK FL V + + +V R++ A
Sbjct: 80 DVGSGGGMPGVPLAILFP---GRRFTLLDSNGKKTRFLTQVKLELQLQNLEVVHSRVE-A 135
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
+ I +RA + L ++
Sbjct: 136 FKPAQPFSGICSRAFSSLADFAGWTRHL 163
>gi|227485739|ref|ZP_03916055.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
gi|227236294|gb|EEI86309.1| glucose inhibited division protein B [Anaerococcus lactolyticus
ATCC 51172]
Length = 209
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K + L+ + NL + + + ++H +DSL V +DLG+G GFP
Sbjct: 1 MDKYIVYTDYLLEVNSHTNLTTITDPAEIDLKHFKDSLTVLDYIKEGDKVLDLGAGAGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCD 143
GI I+ + + LI+S NKK +F+ V++K + R ++ A D
Sbjct: 61 GIPLRIE----KDFDLTLIDSVNKKVNFMNEVIEKLGLTNARAIHTRAEDFAKDHREGFD 116
Query: 144 VISARALADLDTLLEYSFPWLY 165
V+ +RA+A++ TL E P +
Sbjct: 117 VVVSRAVANMATLSELCLPLVK 138
>gi|325478845|gb|EGC81955.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Anaerococcus
prevotii ACS-065-V-Col13]
Length = 212
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L+ + NL + + I+H +DSL + +D+G+G GFPGI
Sbjct: 9 IYMDYLLEVNSHTNLTAIIDPSEIEIKHFKDSLTILDYIKEGDKVLDIGAGAGFPGIPLR 68
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISAR 148
I+ + + LI+S NKK F+ V++K + R ++ A DV+ +R
Sbjct: 69 IE----KEIDLTLIDSVNKKVKFMNEVIEKLNLENARAIHVRAEDFAKDQREKYDVVVSR 124
Query: 149 ALADLDTLLEYSFPWLY 165
A+A++ TL EY P+L
Sbjct: 125 AVANMRTLSEYCLPFLK 141
>gi|220921037|ref|YP_002496338.1| methyltransferase GidB [Methylobacterium nodulans ORS 2060]
gi|254766898|sp|B8IHZ7|RSMG_METNO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219945643|gb|ACL56035.1| methyltransferase GidB [Methylobacterium nodulans ORS 2060]
Length = 212
Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ +L VSRET L+ + +W NLV ST+ + W RH+ DSL++ P
Sbjct: 7 DRVLAAAAVSRETAAALDLYVAQLARWQTVKNLVGPSTLPEVWTRHIADSLQLLDAAPGA 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ W+DLGSG G PG+I +I + V+L+ES +K +FL+ + T A ++ R
Sbjct: 67 TRWLDLGSGAGIPGLILAIAGREARPQMQVDLVESNARKGAFLQETARLTGASARIHVSR 126
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
I+ T +V+ ARALA L LL ++ P L
Sbjct: 127 IESVIGRFTGVEVVCARALAPLPQLLAWTAPLLK 160
>gi|297733841|emb|CBI15088.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---------- 70
++ +++ + L+W++K+NL + + ++ RHV DSL +
Sbjct: 56 LNPLQKQQISLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSS 115
Query: 71 -YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
+D+GSG G PG+I +I S + + L+ES NK+ FL + V T V
Sbjct: 116 CNNISLVDVGSGPGLPGLILAIACPSWK---ITLLESMNKRCIFLEHAVSLTGLSNVQVV 172
Query: 129 ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
R + Q DV ARA+A++ L EY P +
Sbjct: 173 RGRAENLGQNIGFREVFDVAVARAVAEMRILAEYCLPLVR 212
>gi|258543706|ref|YP_003189139.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01]
gi|256634784|dbj|BAI00760.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01]
gi|256637840|dbj|BAI03809.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-03]
gi|256640894|dbj|BAI06856.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-07]
gi|256643949|dbj|BAI09904.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-22]
gi|256647004|dbj|BAI12952.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-26]
gi|256650057|dbj|BAI15998.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-32]
gi|256653047|dbj|BAI18981.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256656101|dbj|BAI22028.1| glucose inhibited division protein B GidB [Acetobacter pasteurianus
IFO 3283-12]
Length = 198
Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 64/152 (42%), Positives = 87/152 (57%), Gaps = 6/152 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+VSRET EKL F L KW+ +INLVSS +E+ W RHV DSL++ L S +
Sbjct: 5 PEGVHVSRETEEKLSAFVSLLEKWNPRINLVSSKDIENVWSRHVLDSLQLVPLIQGQSRF 64
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
ID+GSGGGFP ++ I G LIES +KA+FLR + T +V CR++
Sbjct: 65 IDMGSGGGFPAVVVGIAT----GIPGVLIESDQRKAAFLREAARLTQTHLEVLPCRLESV 120
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V++ARALA L LLE++ P L +
Sbjct: 121 K--VQPAPVVTARALAPLVKLLEWAHPLLQPE 150
>gi|157377626|ref|YP_001476226.1| glucose-inhibited division protein B [Shewanella sediminis HAW-EB3]
gi|189040718|sp|A8G1X5|RSMG_SHESH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157320000|gb|ABV39098.1| methyltransferase GidB [Shewanella sediminis HAW-EB3]
Length = 206
Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 6/154 (3%)
Query: 12 ANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ L N+S + ++L F + KW+K NL S + IRH+ DSL V H
Sbjct: 6 LDEYLAEMNLSATEQQKKQLIGFVEMLNKWNKAYNLTSIRDPQQMLIRHIMDSLAVSP-H 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F + V + +
Sbjct: 65 LVGERFIDVGTGPGLPGIPLAIMNPD---KTFVLLDSLGKRIRFQKQVQHELGIKNISSV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q T D + +RA A ++ +L +
Sbjct: 122 ESRVEAYQPETKFDGVLSRAFASIEDMLHWCHHL 155
>gi|313111485|ref|ZP_07797286.1| glucose inhibited division protein B [Pseudomonas aeruginosa 39016]
gi|310883788|gb|EFQ42382.1| glucose inhibited division protein B [Pseudomonas aeruginosa 39016]
Length = 214
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDADKQRQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPYAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + +V R++ A +
Sbjct: 83 GGGMPGVPLAILFPQKR---LTLLDSNGKKTRFLTQVKLELKLANLEVVHSRVE-AFRPE 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|217978727|ref|YP_002362874.1| methyltransferase GidB [Methylocella silvestris BL2]
gi|217504103|gb|ACK51512.1| methyltransferase GidB [Methylocella silvestris BL2]
Length = 219
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 61/148 (41%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ TL +L + L KW INLV+ ST++D WIRH DSL+V P W+DLG
Sbjct: 24 ELPDVTLRRLALYEALLRKWQGSINLVAKSTLDDIWIRHFVDSLQVSAAAPQARRWVDLG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQM 138
SGGGFPG++T+I+ + ++LIES +K +FLR V ++T A V RI++ A +
Sbjct: 84 SGGGFPGLVTAIRYADDPSAEIHLIESDQRKCAFLRTVSRETGAHAIVHCGRIEDIAAAL 143
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
D +SARALA LL Y+ +L +
Sbjct: 144 DAPFDAVSARALAPFSQLLHYAERFLEK 171
>gi|154245779|ref|YP_001416737.1| 16S rRNA methyltransferase GidB [Xanthobacter autotrophicus Py2]
gi|154159864|gb|ABS67080.1| glucose inhibited division protein [Xanthobacter autotrophicus Py2]
Length = 245
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 64/147 (43%), Positives = 90/147 (61%), Gaps = 2/147 (1%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLG 79
VSRETL +L L +KW K INLV+ +T+ D W RHV DSL++ P P W+DLG
Sbjct: 20 VSRETLGRLTTIADLLVKWQKTINLVAPATLPDLWARHVGDSLQLVHHVPQTPLRWVDLG 79
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ-M 138
SGGGFPG++ + L+ +G ++L+ES +KA+FLR + V A RI++ Q +
Sbjct: 80 SGGGFPGLVVAAVLAERDGAHMHLVESDTRKAAFLREAARLAQLPVTVHAARIEQVAQAL 139
Query: 139 ITTCDVISARALADLDTLLEYSFPWLY 165
V+SARALA L LL+ + P+L
Sbjct: 140 APGTHVVSARALAPLPKLLDLAAPFLA 166
>gi|268610512|ref|ZP_06144239.1| 16S rRNA methyltransferase GidB [Ruminococcus flavefaciens FD-1]
Length = 234
Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIW 75
+++ E K + + +++++ +NL + + + +H DS+ + + S
Sbjct: 16 ELDLTEEMYRKYDIYAECLVEYNRNVNLTAITDPVEILYKHFIDSVLMLKYAEIKPDSSV 75
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE- 134
ID+G+G GFP + I S++ + L++S NK+ SFL+ + +K R ++
Sbjct: 76 IDVGTGAGFPSVPAKIYDDSLK---ITLLDSLNKRISFLQQLCEKLQIDAAFIHGRAEDI 132
Query: 135 --APQMITTCDVISARALADLDTLLEYSFPWL 164
P+ D+ ARA+A++ L EY P++
Sbjct: 133 AKLPEYREKFDISCARAVANMSLLSEYCLPFV 164
>gi|262372458|ref|ZP_06065737.1| 16S rRNA methyltransferase GidB [Acinetobacter junii SH205]
gi|262312483|gb|EEY93568.1| 16S rRNA methyltransferase GidB [Acinetobacter junii SH205]
Length = 210
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ N+S E L L + + W+K NL + ++ ++H+ DSL +
Sbjct: 6 QELKQGSQALGLNLSEEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILN 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ + L++S KK FL+ + + +
Sbjct: 66 DLPKG-RLLDVGTGGGMPGMIIALCQPERDC---VLLDSNGKKIRFLKQFIADLNLKNVI 121
Query: 128 -FACRI--QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R+ +++ + DVI++RA A L ++ + P++++K
Sbjct: 122 AVQTRVENEDSINELGQFDVITSRAFASLTDFVDAAQPYMHEK 164
>gi|260550090|ref|ZP_05824304.1| ribosomal RNA small subunit methyltransferase G [Acinetobacter sp.
RUH2624]
gi|260406845|gb|EEX00324.1| ribosomal RNA small subunit methyltransferase G [Acinetobacter sp.
RUH2624]
Length = 210
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 6 QELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILK 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P P +D+G+GGG PG+I ++ L++S KK FL+ + + V
Sbjct: 66 DLP-PGRLLDVGTGGGMPGMIIALCQPERSC---VLLDSNGKKIRFLKQFIADLKLKNVV 121
Query: 128 -FACRIQ--EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ + + DVI++RA A L +E + P+L++
Sbjct: 122 AVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHE 163
>gi|224369582|ref|YP_002603746.1| GidB [Desulfobacterium autotrophicum HRM2]
gi|223692299|gb|ACN15582.1| GidB [Desulfobacterium autotrophicum HRM2]
Length = 228
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++++ +S + L + LKW++K N+ S + + +H DSL +
Sbjct: 21 EMVKSGGDQLGIALSPDHLGTMARHGTELLKWNRKFNITSITDPREMATKHFIDSLAIAP 80
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK 126
P + +D+GSGGGFPG+ + +E V L+++ K+ SFL +V T +
Sbjct: 81 HIPENARVLDMGSGGGFPGVPLKVVRPDLE---VVLVDASRKRVSFLNRLVSLTGLKSIT 137
Query: 127 VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + P DV+++RA LD + + P+L
Sbjct: 138 AVHARAEILAKDPAFAGRFDVVTSRAFTALDRFVVLAAPFLSP 180
>gi|291457896|ref|ZP_06597286.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419440|gb|EFE93159.1| 16S rRNA methyltransferase GidB [Oribacterium sp. oral taxon 078
str. F0262]
Length = 261
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR------------- 64
++ LEK +Y + +K +NL S + D ++H DSL
Sbjct: 17 GVELTEAQLEKFFLYYERMTEKNKVMNLTSITEESDVVLKHFTDSLSLAAVSLPSAGDVS 76
Query: 65 ---VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + ID+G+G GFPG+ I +E V L +S K+ FL ++++
Sbjct: 77 RETLLRNTLPGKRLIDVGTGAGFPGLALKIAFPELE---VVLNDSLQKRLRFLNELIEEL 133
Query: 122 AARG-KVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
+G R +E D +RA+A L L EY P++
Sbjct: 134 NLKGISCVHGRAEELAHERKWRGAFDFSVSRAVARLSVLSEYDLPFVKN 182
>gi|110635798|ref|YP_676006.1| glucose-inhibited division protein B [Mesorhizobium sp. BNC1]
gi|123057421|sp|Q11CN4|RSMG_MESSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110286782|gb|ABG64841.1| methyltransferase GidB [Chelativorans sp. BNC1]
Length = 210
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 83/145 (57%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
VSRET + L F F KWS +INL + ST+ W RH+ DS ++ ++ P W+DLGS
Sbjct: 16 VSRETFDGLVAFEGEFRKWSARINLTAPSTLPHLWERHILDSAQLIRIAPAARRWLDLGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFPG + +I + V+L+ES KKA+FL+ + A + RI++ I
Sbjct: 76 GGGFPGAVIAILMKEHAPAQVDLVESNRKKAAFLQTSLASLKAPCMIHPQRIEDCYGQIP 135
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
+VI+ARALA L L + PW+
Sbjct: 136 PPEVITARALAPLPVLFGLAEPWMK 160
>gi|254000526|ref|YP_003052589.1| methyltransferase GidB [Methylovorus sp. SIP3-4]
gi|253987205|gb|ACT52062.1| methyltransferase GidB [Methylovorus sp. SIP3-4]
Length = 219
Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL + ++VS+ T +KL + L KW+K NL + ++ H+ DSL V
Sbjct: 5 EILASGIANAGWDVSQATQQKLLDYLALLQKWNKVHNLTAVRDPDEMVTLHLLDSLSVLP 64
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
PS +D+GSG G PGII ++ + ++ V I++ KKASF+R +
Sbjct: 65 HVQALSPSRLLDVGSGAGLPGIILALCMPDLK---VTTIDAVQKKASFMRQAKAELGIAN 121
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V A R+++ + D++ +RA +++ ++ + + +
Sbjct: 122 LEVIAGRVEQ-HRPSQAYDIVISRAFSEIALFIKLTRHLIAE 162
>gi|158426334|ref|YP_001527626.1| 16S rRNA methyltransferase GidB [Azorhizobium caulinodans ORS 571]
gi|189039479|sp|A8I267|RSMG_AZOC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158333223|dbj|BAF90708.1| putative methyltransferase [Azorhizobium caulinodans ORS 571]
Length = 275
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 66/163 (40%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D +S L VSRETL +L+ +W K INLV+ +T+ D W RH+ DSL
Sbjct: 32 ADRSSALDGGRSQVAALVSRETLARLDTIAEQLTRWQKTINLVAPNTLPDLWHRHIADSL 91
Query: 64 RVFQLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ L P + W DLGSGGGFPG++ + L+ EG V L+ES +KA+FLR + A
Sbjct: 92 QLVWLVPETVLNWADLGSGGGFPGLVVAAVLAEREGAHVTLVESDTRKAAFLREASRAAA 151
Query: 123 ARGKVFACRIQEAPQ-MITTCDVISARALADLDTLLEYSFPWL 164
++ RI++A Q + V+SARALA L LL+ + P+L
Sbjct: 152 LPTRIVPERIEQASQRLAAGMQVVSARALAPLPKLLDLTEPFL 194
>gi|300857409|ref|YP_003782393.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
gi|300437524|gb|ADK17291.1| glucose inhibited division protein B [Clostridium ljungdahlii DSM
13528]
Length = 237
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
+ K + + W+ KINL + ED +H D +++F+ P I
Sbjct: 15 GLEFDEKKYSKFIKYKDILKFWNNKINLTTIVEDEDIIKKHFIDCVKIFKFSPLRDISNV 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G GFPGI I I+ V L++S NK+ +FL V+ K R ++
Sbjct: 75 IDIGTGAGFPGIPMKIVNPQIK---VVLLDSLNKRINFLNQVISDIELNDIKCIHGRAED 131
Query: 135 AP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ D +RA+A+L L E+ P++
Sbjct: 132 FSKDIEYREKFDAAVSRAVANLTVLSEFCIPYIK 165
>gi|288956854|ref|YP_003447195.1| glucose inhibited division protein B [Azospirillum sp. B510]
gi|288909162|dbj|BAI70651.1| glucose inhibited division protein B [Azospirillum sp. B510]
Length = 204
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
A VSRETL++L + L KW KINLV ST+ D W RH DS ++ L
Sbjct: 4 FDAVAFQEASGVSRETLDRLIAYEGLLRKWQPKINLVGPSTLPDAWKRHFLDSAQLLPLL 63
Query: 70 PYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLGSG GFPG++ +I + V+LIES +K +FLR V + A V
Sbjct: 64 PEDTRVLVDLGSGAGFPGLVLAI----LGVPQVHLIESDVRKCAFLREVARVCKAPVTVH 119
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
RI+ + DV++ARALA L L ++ P++
Sbjct: 120 TRRIETVTGI--EADVVTARALAPLADLFGWAHPFI 153
>gi|302381485|ref|YP_003817308.1| methyltransferase GidB [Brevundimonas subvibrioides ATCC 15264]
gi|302192113|gb|ADK99684.1| methyltransferase GidB [Brevundimonas subvibrioides ATCC 15264]
Length = 204
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
A+ E + LE F + + + +NLV ++ DFW RH DS ++ L +
Sbjct: 3 ADEFRALTGAWPERMADLERFRVMLTEANAVMNLVGPDSLPDFWSRHAWDSAQLVDLAGF 62
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
W DLG+G GFPG++ +I G V LI+S K+ FL+ +V + V R
Sbjct: 63 GKTWADLGAGAGFPGVVLAILAKGRPGSHVWLIDSLQKRCRFLQTIVDELELPATVVWGR 122
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+E D+++ARA+A +D LL Y+ P+L +
Sbjct: 123 AEE---QALKVDIVTARAVAPMDKLLGYAQPYLSR 154
>gi|255008944|ref|ZP_05281070.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis 3_1_12]
Length = 224
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 20 ELLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRF 79
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI +I + +L++S KK V + F
Sbjct: 80 RPGSKVMDLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTF- 135
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLE 158
R A + T D + +RA+ L L++
Sbjct: 136 -RHARAEEEKQTFDFVVSRAVMPLADLIK 163
>gi|118591439|ref|ZP_01548837.1| glucose-inhibited division protein B [Stappia aggregata IAM 12614]
gi|118436111|gb|EAV42754.1| glucose-inhibited division protein B [Stappia aggregata IAM 12614]
Length = 194
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+++L+ + L LKW NL++ ST+ D W RHV DSL+ +P W+D+GSGGGFP
Sbjct: 1 MDRLQIYVDLVLKWQPAQNLIAPSTIPDIWTRHVADSLQTQWSYPEARTWVDIGSGGGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ--MITTCD 143
G++T+I L+ G V++IES +K +FLR +++T +RG V RI+ + + D
Sbjct: 61 GVVTAILLADEPGAHVHMIESNQRKVAFLRTALRETGSRGTVHPGRIESVAKDWKYGSVD 120
Query: 144 VISARALADLDTLLEYSFPW 163
+SARALA LD L + S P+
Sbjct: 121 AVSARALASLDLLFQLSEPF 140
>gi|53713316|ref|YP_099308.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis YCH46]
gi|253565295|ref|ZP_04842750.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_2_5]
gi|81608504|sp|Q64UQ5|RSMG_BACFR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52216181|dbj|BAD48774.1| glucose-inhibited division protein [Bacteroides fragilis YCH46]
gi|251945574|gb|EES85981.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_2_5]
Length = 224
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 14 YLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 21 LLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARIIRFR 80
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
S +DLG+GGGFPGI +I + +L++S KK V + F
Sbjct: 81 AGSSVMDLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTF-- 135
Query: 131 RIQEAPQMITTCDVISARALADLDTLLE 158
R A + T D + +RA+ L L++
Sbjct: 136 RHARAEEEKQTFDFVVSRAVMPLADLIK 163
>gi|313887693|ref|ZP_07821375.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846302|gb|EFR33681.1| 16S rRNA methyltransferase GidB [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 230
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-- 73
Y++ + ++K E + L L +++ NL + ++F ++H D L + + +
Sbjct: 6 FKDYDLDTKNIDKYERYKKLILDYNQHTNLTRITEDDEFNVKHFLDCLSLLKTGKFNGCE 65
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFPGI + ++ V L++S K+ FL V++ + R
Sbjct: 66 KIIDIGTGAGFPGIPLKLYNERLD---VTLLDSLRKRIDFLDGVIEDLGLENIRAIHARA 122
Query: 133 QEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+E + D+ +RA+A+L TL EY+ ++
Sbjct: 123 EEIARTDEYREQFDLAVSRAVANLSTLTEYAMGFVK 158
>gi|170729226|ref|YP_001763252.1| 16S rRNA methyltransferase GidB [Shewanella woodyi ATCC 51908]
gi|193806451|sp|B1KQ44|RSMG_SHEWM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169814573|gb|ACA89157.1| methyltransferase GidB [Shewanella woodyi ATCC 51908]
Length = 206
Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 12 ANYLLNTYNVSR--ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ L N+S E ++L F + KW+K NL S + IRH+ DSL V + H
Sbjct: 6 LDEYLAEMNLSATTEQKKQLVGFVEMLNKWNKAYNLTSIRDPQQMLIRHIMDSLAVSK-H 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 65 LVGERFIDVGTGPGLPGIPLAIMNPE---RSFVLLDSLGKRIRFQKQVQHELGIHNISSV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA + D + +RA A ++ +L +
Sbjct: 122 ESRVEAFEPEVKFDGVLSRAFASIEDMLHWCHHL 155
>gi|254504857|ref|ZP_05117008.1| methyltransferase GidB [Labrenzia alexandrii DFL-11]
gi|222440928|gb|EEE47607.1| methyltransferase GidB [Labrenzia alexandrii DFL-11]
Length = 194
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 57/143 (39%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+++L+ + L LKW NL++ ST+ D W RHV DSL+ +P +W+D+GSGGGFP
Sbjct: 1 MDRLQIYVDLVLKWQPAQNLIAPSTIPDIWTRHVADSLQTQWSYPEAKVWVDIGSGGGFP 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI--TTCD 143
G++T+I L+ V++IES +KA+FLR +++T ++G V A RI+ + D
Sbjct: 61 GVVTAILLADEPDAHVHMIESNQRKAAFLRTALRETGSKGTVHAGRIESVAEGWSHGPVD 120
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+SARALA L+ L + + P+ Q
Sbjct: 121 AVSARALASLNLLFDLAEPFTAQ 143
>gi|332851808|ref|ZP_08433733.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013150]
gi|332865812|ref|ZP_08436596.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013113]
gi|332729815|gb|EGJ61150.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013150]
gi|332735024|gb|EGJ66109.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6013113]
Length = 210
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 6 QELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILK 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ L++S KK FL+ + + +
Sbjct: 66 DLP-AGRLLDVGTGGGMPGMIIALCQPERSC---VLLDSNGKKIRFLKQFIADLKLKNVI 121
Query: 128 -FACRIQ--EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ + + DVI++RA A L +E + P+L+++
Sbjct: 122 AVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHEQ 164
>gi|254560704|ref|YP_003067799.1| methyltransferase gidB [Methylobacterium extorquens DM4]
gi|254267982|emb|CAX23850.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens DM4]
Length = 234
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 83/152 (54%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+L+ ++VSRET + + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 31 RVLSEHHVSRETAASFDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLTVAPEAT 90
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+DLGSG G PG+I +I G V L+ES +K +FL + T A V RI+
Sbjct: 91 RWLDLGSGAGIPGLILAIAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIE 150
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+T +++ ARALA L LL ++ P L
Sbjct: 151 AVIGTLTDTEIVCARALAPLSQLLAWTEPLLT 182
>gi|329891181|ref|ZP_08269524.1| 16S rRNA methyltransferase GidB [Brevundimonas diminuta ATCC 11568]
gi|328846482|gb|EGF96046.1| 16S rRNA methyltransferase GidB [Brevundimonas diminuta ATCC 11568]
Length = 206
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S + L+ F + + ++ +NLV T+ DFW RH DS ++ L P W DLG+G
Sbjct: 15 SDANIADLQAFLVMLTEANEVMNLVGPDTIPDFWNRHAWDSAQLLSLAPEAKTWADLGAG 74
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFPG++ +I L G V L++S K+ FL+ +V V R +E +
Sbjct: 75 AGFPGVVLAILLKGRPGAHVWLVDSLGKRCRFLQTIVDALDLPATVVNGRAEE---QTIS 131
Query: 142 CDVISARALADLDTLLEYSFPW 163
D+++ARA+A +D LL Y+ P+
Sbjct: 132 VDIVTARAVAAMDKLLGYAQPY 153
>gi|169796154|ref|YP_001713947.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AYE]
gi|184157917|ref|YP_001846256.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ACICU]
gi|213157111|ref|YP_002319156.1| methyltransferase GidB [Acinetobacter baumannii AB0057]
gi|215483608|ref|YP_002325829.1| methyltransferase GidB [Acinetobacter baumannii AB307-0294]
gi|239502206|ref|ZP_04661516.1| glucose-inhibited division protein B [Acinetobacter baumannii
AB900]
gi|260555204|ref|ZP_05827425.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
19606]
gi|301345171|ref|ZP_07225912.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB056]
gi|301511291|ref|ZP_07236528.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB058]
gi|301595774|ref|ZP_07240782.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii AB059]
gi|332872754|ref|ZP_08440720.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6014059]
gi|193806477|sp|B0VCZ6|RSMG_ACIBY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806487|sp|A3M4Y3|RSMG_ACIBT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725347|sp|B7H3N1|RSMG_ACIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226725348|sp|B7I508|RSMG_ACIB5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691004|sp|B2HZC3|RSMG_ACIBC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169149081|emb|CAM86958.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter baumannii AYE]
gi|183209511|gb|ACC56909.1| predicted S-adenosylmethionine-dependent methyltransferase
[Acinetobacter baumannii ACICU]
gi|193077185|gb|ABO11977.2| glucose-inhibited division protein B [Acinetobacter baumannii ATCC
17978]
gi|213056271|gb|ACJ41173.1| methyltransferase GidB [Acinetobacter baumannii AB0057]
gi|213988342|gb|ACJ58641.1| methyltransferase GidB [Acinetobacter baumannii AB307-0294]
gi|260411746|gb|EEX05043.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
19606]
gi|322508236|gb|ADX03690.1| Glucose-inhibited division protein B [Acinetobacter baumannii
1656-2]
gi|323517862|gb|ADX92243.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii
TCDC-AB0715]
gi|332739051|gb|EGJ69912.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii 6014059]
Length = 210
Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 6 QELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILK 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ L++S KK FL+ + + +
Sbjct: 66 DLP-AGRLLDVGTGGGMPGMIIALCQPERSC---VLLDSNGKKIRFLKQFIADLKLKNVI 121
Query: 128 -FACRIQ--EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ + + DVI++RA A L +E + P+L+++
Sbjct: 122 AVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHEQ 164
>gi|88803564|ref|ZP_01119089.1| glucose-inhibited division protein B [Polaribacter irgensii 23-P]
gi|88780576|gb|EAR11756.1| glucose-inhibited division protein B [Polaribacter irgensii 23-P]
Length = 209
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 78/144 (54%), Gaps = 9/144 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S+ +E+ E L+ W+ KIN+VS +++ ++RHV SL + ++ + S +D
Sbjct: 10 DLSQTQIEQFEKLQGLYQDWNLKINVVSRKDIDELYLRHVLHSLAIAKVVQFKAGSKVLD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I + +L++S KK + VV+ + R++E
Sbjct: 70 VGTGGGFPGIPLAILFPETQ---FHLVDSIGKKIKVVDDVVEGLGLENVETTNGRVEELK 126
Query: 137 QMITTCDVISARALADLDTLLEYS 160
T D I +RA+A ++T + ++
Sbjct: 127 D---TYDFIVSRAVAQMETFVRWT 147
>gi|37785810|gb|AAR02617.1| GidB [Aeromonas hydrophila]
Length = 208
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 8 SILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ R N LL + + +L L KW+K NL S + ++H+ DSL V
Sbjct: 1 MLERLNGLLMQAGIVITETQKTQLVRLVELLHKWNKAYNLTSVRDPDAMLVKHILDSL-V 59
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +ID+G+G G PG+ +I + L++S K+ +F+R V+ +
Sbjct: 60 VSRHLHGERFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRINFIRQVILELGLAN 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A L+ +L +
Sbjct: 117 VTPVKSRVEEYQPEVGFDGVLSRAFASLEDMLGWCHHL 154
>gi|152986230|ref|YP_001351677.1| 16S rRNA methyltransferase GidB [Pseudomonas aeruginosa PA7]
gi|166224603|sp|A6VF42|RSMG_PSEA7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150961388|gb|ABR83413.1| methyltransferase GidB [Pseudomonas aeruginosa PA7]
Length = 214
Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ E +L + L +KW+K NL + ++ RH+ DSL + W+D+GS
Sbjct: 23 LDAEKKHQLLAYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSIVPHAEAGDNWLDVGS 82
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
GGG PG+ +I + L++S KK FL V + V R++ A +
Sbjct: 83 GGGMPGVPLAILFPERR---LTLLDSNGKKTRFLTQVKLELKLANLDVVHSRVE-AFRPE 138
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
+ D I +RA + L+ ++
Sbjct: 139 SPFDGIVSRAFSSLEDFANWTRHL 162
>gi|265763391|ref|ZP_06091959.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_16]
gi|263255999|gb|EEZ27345.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_16]
Length = 225
Score = 159 bits (404), Expect = 8e-38, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 14 YLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 22 LLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRFR 81
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
S +DLG+GGGFPGI +I + +L++S KK V + F
Sbjct: 82 AGSSVMDLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTF-- 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLE 158
R A + T D + +RA+ L L++
Sbjct: 137 RHARAEEEKQTFDFVVSRAVMPLADLIK 164
>gi|262375378|ref|ZP_06068611.1| 16S rRNA methyltransferase GidB [Acinetobacter lwoffii SH145]
gi|262309632|gb|EEY90762.1| 16S rRNA methyltransferase GidB [Acinetobacter lwoffii SH145]
Length = 210
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ +S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 6 QELKQGSQALGLELSDEALNLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILK 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ E L++S KK FL+ + + +
Sbjct: 66 DLPVG-RLLDIGTGGGMPGMIIALCQPEREC---VLLDSNGKKIRFLKQFIADLKLKNVI 121
Query: 128 -FACRI--QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R+ +++ + DVI++RA A L ++ S P+++++
Sbjct: 122 AVQTRVENEDSINELGQFDVITSRAFASLTDFVDASKPYMHEQ 164
>gi|330997039|ref|ZP_08320901.1| 16S rRNA methyltransferase GidB [Paraprevotella xylaniphila YIT
11841]
gi|329571537|gb|EGG53219.1| 16S rRNA methyltransferase GidB [Paraprevotella xylaniphila YIT
11841]
Length = 206
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDL 78
+S + E+ + L+ W+ KIN++S +++ + HV SL + + + +DL
Sbjct: 11 LSEKQTEQFQQLDALYHDWNAKINVISRKDIDNLYEHHVLHSLGIAEFTRFKSGTEIMDL 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ 137
G+GGGFPGI +I +L++S KK V ++ + F CR +E
Sbjct: 71 GTGGGFPGIPLAIMFPDCH---FHLVDSIGKKIKVCMEVARELGLKNVTFRHCRAEE--- 124
Query: 138 MITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 125 EKAKFDFVVSRAVMPLADLVK 145
>gi|221236806|ref|YP_002519243.1| methyltransferase gidB [Caulobacter crescentus NA1000]
gi|239977586|sp|B8GW32|RSMG_CAUCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|239977587|sp|P0CAW6|RSMG_CAUCR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|220965979|gb|ACL97335.1| methyltransferase gidB [Caulobacter crescentus NA1000]
Length = 216
Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++L A + +E L F L +W++ +NLV T+ +W RH DS ++
Sbjct: 9 PEAVLDAAGFQALVGATDAQIEDLTRFQTLLAEWNEVMNLVGPLTIATYWTRHALDSAQL 68
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P + W DLG+G G PG++ +I L G V+L+ES K+ FL V +
Sbjct: 69 IPLAPEATAWADLGAGAGLPGVVLAILLKGRAGAKVHLVESMIKRCRFLEVVAKDLDLPV 128
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ R ++ + D+++ARA A + LL ++ P+L
Sbjct: 129 QIHNARAED---LKLKVDIVTARACAPMTKLLGFAEPYLRN 166
>gi|186685535|ref|YP_001868731.1| 16S rRNA methyltransferase GidB [Nostoc punctiforme PCC 73102]
gi|238689423|sp|B2J5Q6|RSMG_NOSP7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|186467987|gb|ACC83788.1| methyltransferase GidB [Nostoc punctiforme PCC 73102]
Length = 244
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLH-----PY 71
+ + + E+ + Y L L+ ++++NL + ++FW +H+ DSLR + L P
Sbjct: 17 NWQPTVQQQEQFQRLYELILEGNRQLNLTRITDPQEFWEKHLWDSLRGILPLLSGNLPPA 76
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
ID+G+G GFPG+ ++ + + + L++S KK +FL ++ + A
Sbjct: 77 SPTIIDIGTGAGFPGVPVAMTVPNC---TITLLDSTQKKITFLDNILTELALTNTKTIVG 133
Query: 131 RIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + + PQ D+ RA+ + EY+ P L Q
Sbjct: 134 RAEKIGQHPQHRMAYDIALIRAVGAVSVCAEYTLPLLKQ 172
>gi|296157545|ref|ZP_06840380.1| methyltransferase GidB [Burkholderia sp. Ch1-1]
gi|295892317|gb|EFG72100.1| methyltransferase GidB [Burkholderia sp. Ch1-1]
Length = 227
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++S L KL + L KW+ NL + I+H+ DSL +
Sbjct: 15 PLLADGVRELGLDLSDAQLGKLLDYVALLSKWNAVYNLTAIRDPRQMLIQHILDSLAIVP 74
Query: 68 LH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
PS +D+GSGGG PGI+ +I L V + + +KK +F +
Sbjct: 75 HLAPLGPSSVLDVGSGGGLPGIVLAIVLPDW---TVTVNDIVHKKTAFQAQAKAELGLAN 131
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ ++ DVI +RA A+L + + + ++
Sbjct: 132 LSVVTGRVESLQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|270294064|ref|ZP_06200266.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D20]
gi|270275531|gb|EFA21391.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D20]
Length = 206
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + +++ E + Y L+L W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 2 DLILKYFPDLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ +L++S KK + + F
Sbjct: 62 RPGTQIMDLGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVRVASEIANSIGLKNVTF- 117
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLE 158
R A + D + +RA+ L LL+
Sbjct: 118 -RHARAEEEKGKFDFVVSRAVMPLTDLLK 145
>gi|332559702|ref|ZP_08414024.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides WS8N]
gi|332277414|gb|EGJ22729.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides WS8N]
Length = 205
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPY 71
+L +VSRET EKL +F L KW+K +NL+ STVE W RH+ DS ++ L
Sbjct: 3 ESVLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVESIWTRHILDSAQLRTHLASQ 62
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P +W+DLGSG GFPGI+ +I + L+ES +KA+FLR ++ V A
Sbjct: 63 PRLWLDLGSGSGFPGIVVAIIAADESPESRFVLVESDQRKATFLRTACRELKLSASVLAA 122
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ P DVISARALA L L + P L
Sbjct: 123 RIESLP--PQKADVISARALAALPDLCALAAPHLAP 156
>gi|254418145|ref|ZP_05031869.1| methyltransferase GidB [Brevundimonas sp. BAL3]
gi|196184322|gb|EDX79298.1| methyltransferase GidB [Brevundimonas sp. BAL3]
Length = 210
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ + + L+ F + + +NLV ++ DFW RH DS ++ P W DLG+G
Sbjct: 16 TSQQIADLDDFRIRLSEANSVMNLVGPDSLPDFWNRHAWDSAQLLTHAPGARTWADLGAG 75
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFPG++ +I L G V LI+S K+ FL+ +V V R +E
Sbjct: 76 AGFPGVVLAILLKDAPGAHVWLIDSLGKRCRFLQEIVDVMDLPATVINGRAEE---QAVK 132
Query: 142 CDVISARALADLDTLLEYSFPW 163
CD+++ARA+A ++ LL Y+ P+
Sbjct: 133 CDIVTARAVAPMERLLGYAQPY 154
>gi|290968162|ref|ZP_06559707.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
gi|290781837|gb|EFD94420.1| 16S rRNA methyltransferase GidB [Megasphaera genomosp. type_1 str.
28L]
Length = 237
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--Q 67
L ++ + +E+ F+ ++ +K +NL + ++ ++H+ DSL + +
Sbjct: 6 LYQACTALGLSIQPQQMEQYTKFFEYLVEINKVMNLTKLTAPDEVALKHMADSLSCYDEE 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ + +DLG+G GFPGI I ++ +S K+ F+ V + V
Sbjct: 66 IFKVRATVLDLGTGAGFPGIPLKIYRPDLQLTFF---DSLKKRLQFISCVTDLLQIKQTV 122
Query: 128 -FACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ D++++RA+A L L E++ P++ +
Sbjct: 123 CLHGRAEDLAHQDVYREQFDLVTSRAVARLSVLAEWALPYVKK 165
>gi|127514780|ref|YP_001095977.1| glucose-inhibited division protein B [Shewanella loihica PV-4]
gi|126640075|gb|ABO25718.1| methyltransferase GidB [Shewanella loihica PV-4]
Length = 234
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ + ++L F + KW+K NL S E IRH+ DSL H +ID+G+G
Sbjct: 45 TPKQKQQLLDFVAMLAKWNKAYNLTSVRDPEQMLIRHIMDSLAASP-HLVGERFIDVGTG 103
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PGI +I E L++S K+ F + V + A EA Q
Sbjct: 104 PGLPGIPLAIMNPDKE---FVLLDSLGKRIRFQKQVQFELAIGNISSVESRVEAYQPEEK 160
Query: 142 CDVISARALADLDTLLEYSFPW 163
D + +RA A + +L++
Sbjct: 161 FDGVLSRAFASIQDMLQWCHHL 182
>gi|260913577|ref|ZP_05920054.1| methyltransferase GidB [Pasteurella dagmatis ATCC 43325]
gi|260632353|gb|EEX50527.1| methyltransferase GidB [Pasteurella dagmatis ATCC 43325]
Length = 210
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L +++ + +L F L KW+K NL S + ++H+ DS+ +
Sbjct: 9 SQKLETLLKQTALSITDQQKVQLVKFVLLLHKWNKAYNLTSVRDPIEMLVKHILDSIIIS 68
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ID+G+G G PG+ +I + L++S K+ SF+R V++
Sbjct: 69 PYL-EGERFIDVGTGPGLPGLPLAIINPDKQ---FVLLDSLGKRISFIRNAVRELGLNNV 124
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ R++E Q D + +RA A L + ++
Sbjct: 125 EPVLSRVEE-YQPEQLFDGVLSRAFASLKDMTDWCQHL 161
>gi|262370371|ref|ZP_06063697.1| methyltransferase GidB [Acinetobacter johnsonii SH046]
gi|262314713|gb|EEY95754.1| methyltransferase GidB [Acinetobacter johnsonii SH046]
Length = 210
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 8 LKQGSQKLGLDLSEEALNLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILKDL 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
P +D+G+GGG PG+I ++ + L++S KK FL+ + +
Sbjct: 68 PKG-RLLDIGTGGGMPGMIIALCQPERQC---VLLDSNGKKIRFLKQFIADLKLTNVIAV 123
Query: 129 ACRI--QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R+ +++ + DVI++RA A L + S P+++Q
Sbjct: 124 QTRVENEDSIHDLGQFDVITSRAFASLTDFINASKPYMHQ 163
>gi|212637843|ref|YP_002314368.1| 16S rRNA methyltransferase GidB [Shewanella piezotolerans WP3]
gi|226725363|sp|B8CVV5|RSMG_SHEPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|212559327|gb|ACJ31781.1| Glucose inhibited division protein [Shewanella piezotolerans WP3]
Length = 207
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ S + ++L F + KW+K NL S E IRH+ DSL V H S +ID
Sbjct: 14 GLDASEQQKKQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDSL-VVSPHLKGSRFID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ F + V + EA Q
Sbjct: 73 VGTGPGLPGIPLAILNPDKE---FVLLDSLGKRIRFQKQVQFELGINNISSIESRVEAYQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + +L++
Sbjct: 130 PEELFDGVLSRAFASIQDMLQWCHHL 155
>gi|237747166|ref|ZP_04577646.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes HOxBLS]
gi|229378517|gb|EEO28608.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes HOxBLS]
Length = 221
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L ++ L KL + L KW+ NL + H+ DSL +
Sbjct: 10 LLEKGARELGISLGDNQLNKLSTYLVLLSKWNAIYNLTAIRDWRAMLTHHLMDSLSIVPF 69
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+GSGGG PG+I +I ++ V LI+ +KK +F+ V + A +
Sbjct: 70 LLECKNLLDVGSGGGLPGLILAIAYPELK---VTLIDIVHKKTAFMNQVKIELALKNVTV 126
Query: 129 A-CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E + DVI +RA + L + S L +
Sbjct: 127 CTGRVEELF-VDKKFDVIVSRAFSSLSDFVSLSGHLLDE 164
>gi|254477561|ref|ZP_05090947.1| methyltransferase GidB [Ruegeria sp. R11]
gi|214031804|gb|EEB72639.1| methyltransferase GidB [Ruegeria sp. R11]
Length = 204
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/152 (43%), Positives = 98/152 (64%), Gaps = 3/152 (1%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ +VSRET ++L+++ L KWS KINLV+ ST+ED W RH+ DS++V L +P W
Sbjct: 6 IAGVDVSRETYDRLKHYESLVQKWSPKINLVAKSTLEDVWERHIVDSVQVCDLVSFPETW 65
Query: 76 IDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSGGGFPG++ +I + V LIES +K +FLR +++ RG+V + RI++
Sbjct: 66 VDIGSGGGFPGVVVAIVAAEKAPDCQVTLIESDQRKCAFLRTALRECGVRGRVISDRIEK 125
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
M V+SARALADL LLE++ L +
Sbjct: 126 VAPM--GAGVLSARALADLSLLLEFAERHLSK 155
>gi|209515786|ref|ZP_03264649.1| methyltransferase GidB [Burkholderia sp. H160]
gi|209503813|gb|EEA03806.1| methyltransferase GidB [Burkholderia sp. H160]
Length = 227
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S+L ++S E KL + L KW+ NL + I+H+ DSL +
Sbjct: 15 SLLADGVRELGLDLSDEQQRKLLDYVALLAKWNNVYNLTAIRDPRQMLIQHILDSLSIVP 74
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
PS +D+GSGGG PGI+ +I L V + +KK +F +
Sbjct: 75 HLALRGPSAALDVGSGGGLPGIVLAIVLPDW---TVTTNDIVHKKTAFQAQAKAELGLAN 131
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ ++ DVI +RA A+L + + + ++
Sbjct: 132 LSVVTGRVETLRPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|16127984|ref|NP_422548.1| glucose inhibited division protein B [Caulobacter crescentus CB15]
gi|5174777|gb|AAD40694.1| GidB [Caulobacter crescentus CB15]
gi|13425528|gb|AAK25716.1| glucose inhibited division protein B, putative [Caulobacter
crescentus CB15]
Length = 205
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L A + +E L F L +W++ +NLV T+ +W RH DS ++ L
Sbjct: 1 MLDAAGFQALVGATDAQIEDLTRFQTLLAEWNEVMNLVGPLTIATYWTRHALDSAQLIPL 60
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + W DLG+G G PG++ +I L G V+L+ES K+ FL V + ++
Sbjct: 61 APEATAWADLGAGAGLPGVVLAILLKGRAGAKVHLVESMIKRCRFLEVVAKDLDLPVQIH 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ + D+++ARA A + LL ++ P+L
Sbjct: 121 NARAED---LKLKVDIVTARACAPMTKLLGFAEPYLRN 155
>gi|332830472|gb|EGK03100.1| ribosomal RNA small subunit methyltransferase G [Dysgonomonas gadei
ATCC BAA-286]
Length = 206
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E + Y L++ W+ KIN++S +E+ + HV SL + +L + + +D
Sbjct: 10 DISEEQKSQFAALYDLYVDWNSKINVISRKDIENLYTHHVLHSLAIAKLIQFTDGTQLMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
+G+GGGFPG+ +I + L++S KK V + F CR +E
Sbjct: 70 VGTGGGFPGVPLAILFPKCK---FLLVDSIGKKIRVATEVATAIGLKNIQFRHCRAEEVK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 127 ---EKFDFVVSRAVMPLPDLVK 145
>gi|325576879|ref|ZP_08147494.1| glucose inhibited division protein B [Haemophilus parainfluenzae
ATCC 33392]
gi|325161085|gb|EGC73203.1| glucose inhibited division protein B [Haemophilus parainfluenzae
ATCC 33392]
Length = 203
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L ++ ++L L KW+K NL S ++ ++H+ DS+ V
Sbjct: 1 MKAKLENLLTQAEIQLTDLQKDQLIQLVQLLNKWNKAYNLTSVRDPQEMLVKHILDSIVV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ID+G+G G PG+ +I + + L++S K+ SF+R V++
Sbjct: 61 SSYL-QGDRFIDVGTGPGLPGLPLAIINPTKQ---FVLLDSLGKRISFIRNAVRELGLTN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E Q D + +RA A L + ++ Q
Sbjct: 117 VEPVLSRVEE-YQSEQKFDGVLSRAFASLKDMTDWCHHLPKQ 157
>gi|291615446|ref|YP_003525603.1| methyltransferase GidB [Sideroxydans lithotrophicus ES-1]
gi|291585558|gb|ADE13216.1| methyltransferase GidB [Sideroxydans lithotrophicus ES-1]
Length = 207
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A V+ E KL + L KW+ NL + E H+ DSL V
Sbjct: 7 LAAGIAQMGLEVTPEQQVKLLDYLALLQKWNGVYNLTAIRQPEQMVSNHLLDSLAVLPYL 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+P W+D+G GGG PGI+ ++ L++S +KK F++ + +
Sbjct: 67 -WPRRWLDVGCGGGLPGIVLAVMRPEW---SFTLLDSNSKKIGFIQQAAIELDLQNVEVR 122
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
C E Q+ D I +RA A++ + S L
Sbjct: 123 CERVEQWQVQQKFDGIISRAFAEVADFVRLSRHLLKD 159
>gi|110835597|ref|YP_694456.1| methyltransferase GidB; glucose-inhibited division protein B
[Alcanivorax borkumensis SK2]
gi|123345183|sp|Q0VKW4|RSMG_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110648708|emb|CAL18184.1| Methyltransferase GidB; glucose-inhibited division protein B
[Alcanivorax borkumensis SK2]
Length = 204
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+S L ++S + L + L +KW++ NL + ++ RH+ DSL V
Sbjct: 4 SSTLTQGIDALGLSLSDDQQRLLLAYVDLLVKWNQAYNLTAIRDPQEMVTRHLLDSLAVL 63
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+D+G+G G PG+I ++ L++S KK F+R ++
Sbjct: 64 AYLEEGDT-LDVGTGAGIPGVILAVARPQ---QAFVLLDSNGKKTRFVRQARRELGLDNV 119
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V R+++ + + I RA A L +L P +
Sbjct: 120 EVVHGRVEQYRKAPSQ---IICRAFASLSDMLALMTPIMTD 157
>gi|77464806|ref|YP_354310.1| putative GidB, glucose inhibited division protein [Rhodobacter
sphaeroides 2.4.1]
gi|123590766|sp|Q3IYH5|RSMG_RHOS4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77389224|gb|ABA80409.1| putative GidB, Glucose inhibited division protein [Rhodobacter
sphaeroides 2.4.1]
Length = 206
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPY 71
+L +VSRET EKL +F L KW+K +NL+ STV+ W RHV DS ++ L
Sbjct: 4 ESVLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVDSIWTRHVLDSAQLRTHLASQ 63
Query: 72 PSIWIDLGSGGGFPGIITSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P +W+DLGSG GFPGI+ +I + L+ES +KA+FLR ++ V A
Sbjct: 64 PRLWLDLGSGSGFPGIVVAIMAAYESPESRFVLVESDQRKATFLRTACRELKLSASVLAA 123
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ P DVISARALA L L + P L
Sbjct: 124 RIESLP--PQKADVISARALAALPDLCALAAPHLAP 157
>gi|15603351|ref|NP_246425.1| glucose-inhibited division protein B [Pasteurella multocida subsp.
multocida str. Pm70]
gi|13431543|sp|P57946|RSMG_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|12721870|gb|AAK03570.1| GidB [Pasteurella multocida subsp. multocida str. Pm70]
Length = 210
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 6/161 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L +++ + E+L L KW+K NL S + ++H+ DS V
Sbjct: 9 SQKLEILLKQTALSITDQQKEQLIKLVLLLNKWNKAYNLTSVRDPMEMLVKHILDS-VVV 67
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
H +ID+G+G G PG+ +I + L++S K+ SF+R +++
Sbjct: 68 SPHLQGKHFIDVGTGPGLPGLPLAIVNPNKH---FVLLDSLGKRISFIRNAIRELGLDNV 124
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E D + +RA A L + ++ Q
Sbjct: 125 EAVLSRVEE-YHPEQPFDGVLSRAFASLKDMTDWCQHLPKQ 164
>gi|240138142|ref|YP_002962614.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens AM1]
gi|240008111|gb|ACS39337.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Methylobacterium extorquens AM1]
Length = 234
Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 84/152 (55%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 31 RVLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLSIAPEAT 90
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI+
Sbjct: 91 RWLDLGSGAGIPGLILALAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIE 150
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+T +++ ARALA L LL ++ P L
Sbjct: 151 AVIGTLTDTEIVCARALAPLSQLLAWTEPLLT 182
>gi|315122030|ref|YP_004062519.1| 16S rRNA methyltransferase GidB [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495432|gb|ADR52031.1| 16S rRNA methyltransferase GidB [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 176
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 92/118 (77%), Positives = 106/118 (89%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
VS STVEDFW RH+EDSLRVFQLHPY S+W+DLGSGGGFPGI+TSIQL+ I+GG VNLIE
Sbjct: 2 VSPSTVEDFWKRHIEDSLRVFQLHPYSSVWVDLGSGGGFPGIVTSIQLAEIKGGWVNLIE 61
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
S NKKA FLRYV+++T ARGKVF+CRIQEA ++I CD+ISARALA+LD LLEYSFPW
Sbjct: 62 SNNKKAGFLRYVLKQTEARGKVFSCRIQEASKLIEKCDIISARALANLDILLEYSFPW 119
>gi|160889787|ref|ZP_02070790.1| hypothetical protein BACUNI_02218 [Bacteroides uniformis ATCC 8492]
gi|156860779|gb|EDO54210.1| hypothetical protein BACUNI_02218 [Bacteroides uniformis ATCC 8492]
Length = 206
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + +++ E + Y L+L W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 2 DLILKYFPDLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I ++ +L++S KK + + F
Sbjct: 62 RPGTQIMDLGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVRVASEIANSIGLKNITF- 117
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLE 158
R A + D + +RA+ L LL+
Sbjct: 118 -RHARAEEEKGKFDFVVSRAVMPLTDLLK 145
>gi|315128179|ref|YP_004070182.1| glucose-inhibited division protein B [Pseudoalteromonas sp. SM9913]
gi|315016692|gb|ADT70030.1| glucose-inhibited division protein B [Pseudoalteromonas sp. SM9913]
Length = 206
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++++ ++L + L KW+K NL S ++ ++H+ DSL V H +ID+
Sbjct: 15 IALTQKQQQQLVSYVELLDKWNKAYNLTSVRLPQEMMVKHIMDSLVVAP-HLTGHHYIDV 73
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+G G PGI+ +I L + L++S K+ FL +V + R++E Q
Sbjct: 74 GTGPGLPGIVLAIALPDTQ---FVLLDSLGKRVRFLMHVKHELGLDNVTPVQSRVEE-YQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
D + +RA A L ++++ +
Sbjct: 130 PSVKLDGVLSRAFASLQDMIDWCSHLI 156
>gi|170718146|ref|YP_001785175.1| 16S rRNA methyltransferase GidB [Haemophilus somnus 2336]
gi|168826275|gb|ACA31646.1| methyltransferase GidB [Haemophilus somnus 2336]
Length = 220
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 1 MKYCDSNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
M N + + N+LL + + E+L L KW+K NL S + ++H
Sbjct: 1 MADLQKNLMEKLNFLLKNTALLPTNLQKERLVQLVLLLNKWNKAYNLTSVRDPMEMLVKH 60
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ DS+ V +I+ID+G+G G PG+ +I + L++S K+ SF+R V
Sbjct: 61 ILDSIVVSPYL-QGNIFIDVGTGPGLPGLPLAIINPDKK---FFLLDSLGKRISFIRNAV 116
Query: 119 QKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + R++E + D + +RA A L + E+ L +
Sbjct: 117 RELELTNVEPVLSRVEEF-KPDHQFDGVLSRAFASLKDMTEWCQHLLTDQ 165
>gi|189039676|sp|Q3Z8E1|RSMG_DEHE1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 235
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGG 83
LE+ E +Y + ++ ++NL + + ED ++H DS + +D+GSG G
Sbjct: 19 QLEQFETYYRELVDYNSRVNLTAITGYEDIQLKHFLDSASLALAGIKGDEKLLDVGSGAG 78
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FPG+ I ++ G L+E+ KKA FL + K G ++ + R ++A Q
Sbjct: 79 FPGLPLKIIFPGMKLG---LLEATQKKARFLSEITAKLGLTGVEIISQRAEDAAQNPLYR 135
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 136 QKYTLVTSRAVADMATLAELTLPF 159
>gi|50085458|ref|YP_046968.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. ADP1]
gi|55976394|sp|Q6F9W7|RSMG_ACIAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|49531434|emb|CAG69146.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ADP1]
Length = 212
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 6 QELKQGSQALGLDLSDEVLGLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILK 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ L++S KK FL+ + + V
Sbjct: 66 DLPQG-RLLDVGTGGGMPGMIIALCQPERNC---VLLDSNGKKIRFLKQFIADLKLKNVV 121
Query: 128 -FACRI--QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R+ +E+ Q + DVI++RA A L ++ + P++Y+
Sbjct: 122 AVQTRVENEESIQELGKFDVITSRAFASLLDFVDAARPYMYE 163
>gi|57234428|ref|YP_181508.1| methyltransferase GidB [Dehalococcoides ethenogenes 195]
gi|57224876|gb|AAW39933.1| methyltransferase GidB [Dehalococcoides ethenogenes 195]
Length = 253
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGG 83
LE+ E +Y + ++ ++NL + + ED ++H DS + +D+GSG G
Sbjct: 37 QLEQFETYYRELVDYNSRVNLTAITGYEDIQLKHFLDSASLALAGIKGDEKLLDVGSGAG 96
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MI 139
FPG+ I ++ G L+E+ KKA FL + K G ++ + R ++A Q
Sbjct: 97 FPGLPLKIIFPGMKLG---LLEATQKKARFLSEITAKLGLTGVEIISQRAEDAAQNPLYR 153
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
++++RA+AD+ TL E + P+
Sbjct: 154 QKYTLVTSRAVADMATLAELTLPF 177
>gi|254483171|ref|ZP_05096404.1| methyltransferase GidB [marine gamma proteobacterium HTCC2148]
gi|214036542|gb|EEB77216.1| methyltransferase GidB [marine gamma proteobacterium HTCC2148]
Length = 169
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
T ++L + L +KW++ NL + E +H+ DSL + ID+G+GGG
Sbjct: 9 TQQRLLAYLELMIKWNRAYNLTAVRDPEQMVTKHLLDSLAIAPYL-AGDYLIDVGTGGGL 67
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG+ SI + +L++S KK FL V V EA T D
Sbjct: 68 PGVPLSIVFPDRQ---FHLLDSNGKKTRFLFQVKTALGLDNMVVHQARVEAFDSETPFDA 124
Query: 145 ISARALADLDTLLEYSFPW 163
+ +RA A L+ +++
Sbjct: 125 VLSRAFASLEDMVDDCRHL 143
>gi|56477078|ref|YP_158667.1| 16S rRNA methyltransferase GidB [Aromatoleum aromaticum EbN1]
gi|81821135|sp|Q5P4J7|RSMG_AZOSE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56313121|emb|CAI07766.1| Methyltransferase gidB, Glucose inhibited division protein B
[Aromatoleum aromaticum EbN1]
Length = 211
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 3/163 (1%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S + L ++S T +L F L KW++ NL S H+ DSL V
Sbjct: 2 SAATLEQGLAELGLHLSPATQARLAAFATLLQKWNRVYNLTSIRDAGQVVTHHLLDSLAV 61
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAAR 124
+ D+GSGGG PGI ++ L V IE+ NKKASF + +
Sbjct: 62 LPHLEGITTLADVGSGGGLPGIPLALAAPDCHPALAVTSIETVNKKASFQQQAKIELGLA 121
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + D + +RA ++L + + L
Sbjct: 122 NFTVVNERVENV-RPEAKFDAVISRAFSELLDFVGLTAHLLRP 163
>gi|254512294|ref|ZP_05124361.1| methyltransferase GidB [Rhodobacteraceae bacterium KLH11]
gi|221536005|gb|EEE38993.1| methyltransferase GidB [Rhodobacteraceae bacterium KLH11]
Length = 207
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/145 (40%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+T NVSRET E+L + L +W+ KINLVS +++++ W+RH++DS++++Q W+
Sbjct: 10 DTLNVSRETFERLTIYVDLLERWNPKINLVSRNSLKEIWVRHIQDSVQIYQCAEDAIHWV 69
Query: 77 DLGSGGGFPGIITSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG++ +I L+ES +K++FLR V ++ +V + RI+
Sbjct: 70 DLGSGGGFPGMVCAIMAKEEAPFTRFTLVESDQRKSAFLRNVARECGVDCRVVSRRIEMI 129
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
+ D++SARALADL TLL +
Sbjct: 130 DPLR--ADILSARALADLGTLLSFC 152
>gi|29346555|ref|NP_810058.1| 16S rRNA methyltransferase GidB [Bacteroides thetaiotaomicron
VPI-5482]
gi|253568083|ref|ZP_04845494.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
1_1_6]
gi|38257555|sp|Q8A8M2|RSMG_BACTN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|29338451|gb|AAO76252.1| glucose-inhibited division protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842156|gb|EES70236.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
1_1_6]
Length = 206
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ + + +D
Sbjct: 10 DLTEEQRKQFAALYDLYIDWNAKINVISRKDIENLYEHHVLHSLGIAKVIQFRPGTKVMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 70 LGTGGGFPGIPLAILFPETK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L L++
Sbjct: 127 QL---FDFVVSRAVMPLADLIK 145
>gi|262278902|ref|ZP_06056687.1| methyltransferase GidB [Acinetobacter calcoaceticus RUH2202]
gi|299770414|ref|YP_003732440.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. DR1]
gi|262259253|gb|EEY77986.1| methyltransferase GidB [Acinetobacter calcoaceticus RUH2202]
gi|298700502|gb|ADI91067.1| 16S rRNA methyltransferase GidB [Acinetobacter sp. DR1]
Length = 210
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ ++S E L L + + W+K NL + ++ ++H+ DSL +
Sbjct: 6 QELQQGSQKLGLSLSDEALALLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILN 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ + L++S KK FL+ + V
Sbjct: 66 DLPEG-RLLDVGTGGGMPGMIIALCQPQRQC---VLLDSNGKKIRFLKQFIADLKLSNVV 121
Query: 128 -FACRIQ--EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ + + DVI++RA A L ++ + P+L+Q
Sbjct: 122 AVQTRVENQDTIDELGQFDVITSRAFASLTDFVDAAQPYLHQ 163
>gi|126463649|ref|YP_001044763.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17029]
gi|189040715|sp|A3PNS5|RSMG_RHOS1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126105313|gb|ABN77991.1| methyltransferase GidB [Rhodobacter sphaeroides ATCC 17029]
Length = 206
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/156 (41%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPY 71
+L +VSRET EKL +F L KW+K +NL+ STV+ W RHV DS ++ L
Sbjct: 4 ESVLAQLDVSRETSEKLSHFVALVEKWNKAVNLIGRSTVDSIWTRHVLDSAQLRTHLTSQ 63
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P +W+DLGSG GFPGI+ +I + L+ES +KA+FLR ++ V A
Sbjct: 64 PRLWLDLGSGSGFPGIVVAIMAADESPESRFVLVESDQRKATFLRTACRELKLSAAVLAA 123
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ P DVISARALA L L + P L
Sbjct: 124 RIESLP--PQKADVISARALAALPDLCALAAPHLAP 157
>gi|260170515|ref|ZP_05756927.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D2]
gi|315918859|ref|ZP_07915099.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D2]
gi|313692734|gb|EFS29569.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D2]
Length = 206
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E ++ Y L+ W+ KIN++S +E+ + HV SL + ++ + + +D
Sbjct: 10 DLTEEQRKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKIIQFRPGTSIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LG+GGGFPGI +I ++ +L++S KK V + F R A +
Sbjct: 70 LGTGGGFPGIPLAILFPEVK---FHLVDSIGKKVRVATEVANAIGLKNVTF--RHARAEE 124
Query: 138 MITTCDVISARALADLDTLLE 158
T D + +RA+ L L++
Sbjct: 125 EKRTFDFVVSRAVMPLADLIK 145
>gi|94501612|ref|ZP_01308129.1| glucose-inhibited division protein B [Oceanobacter sp. RED65]
gi|94426295|gb|EAT11286.1| glucose-inhibited division protein B [Oceanobacter sp. RED65]
Length = 205
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L+ +S + +E L ++ L KW+K NL + +D RH+ DSL +
Sbjct: 3 QALLKTGLKKLQIELSDDKIELLLAYHGLLAKWNKAYNLTAVRDPQDMIGRHLLDSLSIL 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+G+G G PGI +I + + L++S KK FL +
Sbjct: 63 PHV-EGERILDVGTGPGLPGIPLAICHPEKD---ITLLDSNGKKTRFLTQSKIELKLSNI 118
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
RI++ + D I++RA A L+ ++ S L
Sbjct: 119 TPVQSRIEKYEAPL--FDAITSRAFATLEDMVNGSIHLLK 156
>gi|293608265|ref|ZP_06690568.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828838|gb|EFF87200.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122003|gb|ADY81526.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter calcoaceticus PHEA-2]
Length = 210
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 6 QELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILK 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ L++S KK FL+ + + V
Sbjct: 66 DLP-TGRLLDVGTGGGMPGMIIALCQPERSC---VLLDSNGKKIRFLKQFIADLKLKNVV 121
Query: 128 -FACRIQ--EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ + + DVI++RA A L ++ + P+L+Q
Sbjct: 122 AVQTRVENQDTIDELGQFDVITSRAFASLTDFVDAAQPYLHQ 163
>gi|317478821|ref|ZP_07937972.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 4_1_36]
gi|316904997|gb|EFV26800.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 4_1_36]
Length = 206
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + +++ E + Y L+L W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 2 DLILKYFPDLTEEQKRQFAALYDLYLDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLG+GGGFPGI +I + +L++S KK + + F
Sbjct: 62 RPGTQIMDLGTGGGFPGIPLAILFPEV---YFHLVDSIGKKVRVASEIANSIGLKNVTF- 117
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLE 158
R A + D + +RA+ L LL+
Sbjct: 118 -RHARAEEEKGKFDFVVSRAVMPLTDLLK 145
>gi|169633362|ref|YP_001707098.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii SDF]
gi|238688142|sp|B0VMY0|RSMG_ACIBS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169152154|emb|CAP01056.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter baumannii]
Length = 210
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ ++S E L L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 6 QELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILK 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ L++S KK FL+ + + +
Sbjct: 66 DLP-AGRLLDVGTGGGMPGMIIALCQPERSC---VLLDSNGKKIRFLKQFIADLKLKNVI 121
Query: 128 -FACRIQ--EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ + + DVI++RA A L + + P+L+++
Sbjct: 122 AVQTRVENQDTIDELGQFDVITSRAFASLTDFVGAARPYLHEQ 164
>gi|312130642|ref|YP_003997982.1| 16S rRNA m(7)g-527 methyltransferase [Leadbetterella byssophila DSM
17132]
gi|311907188|gb|ADQ17629.1| 16S rRNA m(7)G-527 methyltransferase [Leadbetterella byssophila DSM
17132]
Length = 233
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 3 YCDSNSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ +N ++A+ + + ++ E ++ E L+ +W+ +IN++S ++ + RHV
Sbjct: 19 FVKNNGKVKADIIYKYFPELTEEQKDQFERLEDLYKEWNAQINVISRKDIDSLYERHVLH 78
Query: 62 SLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + ++ + S +D+G+GGGFPGI +I + +L+++ KK ++ V
Sbjct: 79 SLGIAKVCTFAPDSDVLDVGTGGGFPGIPLAILFPEVN---FHLVDAVGKKIKVVQEVAN 135
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + ++ T D + +RA+ ++ + +
Sbjct: 136 GLGLKN--VKAEHERVEKLRDTYDFVISRAVTRMEPFIGW 173
>gi|322421973|ref|YP_004201196.1| methyltransferase GidB [Geobacter sp. M18]
gi|320128360|gb|ADW15920.1| methyltransferase GidB [Geobacter sp. M18]
Length = 217
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ +L ++ L L+ F KW++KINL + + E ++H+ DSL
Sbjct: 4 RAKDLLNKGAGELGIELTPAQLNALDLFAEELKKWNRKINLTAITDDEGIAVKHLVDSLS 63
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ++ +D+GSGGGFPGI + +E + +++ KK SF + V+
Sbjct: 64 LLKVVRGGGRLLDIGSGGGFPGIPVKLVQPDLE---IVSVDAVVKKISFQKQAVRLLNLV 120
Query: 125 G-KVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
G R + A + D + +RA +D+ + +E + P L
Sbjct: 121 GFNAMHVRAETLAADYAASFDWVVSRAFSDIPSFVEMALPVLK 163
>gi|294143116|ref|YP_003559094.1| glucose-inhibited division protein B [Shewanella violacea DSS12]
gi|293329585|dbj|BAJ04316.1| glucose-inhibited division protein B [Shewanella violacea DSS12]
Length = 206
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+++L + + ++L F + KW+K NL S + IRH+ DSL V
Sbjct: 3 SALLDEYLAEMNLTATEQQKKQLVGFVEMLNKWNKAYNLTSVRDPKQMLIRHIMDSLAV- 61
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H +ID+G+G G PGI +I L++S K+ F + V
Sbjct: 62 SAHLVGERFIDVGTGPGLPGIPLAIMNPDKH---FVLLDSLGKRIRFQKQVQFDLGIDNI 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA + D + +RA A ++ +L +
Sbjct: 119 SSVESRVEAYEPEEKFDGVLSRAFASIEDMLHWCHHL 155
>gi|113461840|ref|YP_719909.1| 16S rRNA methyltransferase GidB [Haemophilus somnus 129PT]
gi|123327493|sp|Q0I5W5|RSMG_HAES1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112823883|gb|ABI25972.1| 16S rRNA m(7)G-527 methyltransferase [Haemophilus somnus 129PT]
Length = 212
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + N+LL + + E+L L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MEKLNFLLKNTALLPTNLQKERLVQLVLLLNKWNKAYNLTSVRDPMEMLVKHILDSIVVS 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+I+ID+G+G G PG+ +I + L++S K+ SF+R V++
Sbjct: 61 PYL-QGNIFIDVGTGPGLPGLPLAIINPDKK---FFLLDSLGKRISFIRNAVRELELTNV 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E + D + +RA A L + E+ L +
Sbjct: 117 EPVLSRVEEF-KPDHQFDGVLSRAFASLKDMTEWCQHLLTDQ 157
>gi|167648980|ref|YP_001686643.1| methyltransferase GidB [Caulobacter sp. K31]
gi|189039491|sp|B0T6E2|RSMG_CAUSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167351410|gb|ABZ74145.1| methyltransferase GidB [Caulobacter sp. K31]
Length = 221
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ L L F L +W++ +NLV +T+ +W RH DS ++ +L P W DLG+G
Sbjct: 28 TDAQLADLTRFQALLTEWNEVMNLVGPATLPTYWNRHAWDSAQLLKLAPDARTWADLGAG 87
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PG++ +I L G ++L+ES K+ FLR V ++ R +E +
Sbjct: 88 AGLPGVVLAILLKGTPGAKIHLVESMTKRCKFLRAVADALDLPVEIHNARAEELDLKVE- 146
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
+++ARA A + LL Y+ P+L +
Sbjct: 147 --IVTARACAPMVRLLGYAQPYLKR 169
>gi|254427374|ref|ZP_05041081.1| methyltransferase GidB [Alcanivorax sp. DG881]
gi|196193543|gb|EDX88502.1| methyltransferase GidB [Alcanivorax sp. DG881]
Length = 204
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L +S + L + L +KW++ NL + ++ RH+ DSL V
Sbjct: 4 SDTLAGGIDTLGLTLSDDQSRLLLAYVDLLVKWNQAYNLTAIRDPQEMVTRHLLDSLAVL 63
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+D+G+G G PGII ++ L++S KK F+R ++
Sbjct: 64 PHLGEGDT-LDVGTGAGIPGIILAVARPQ---QAFVLLDSNGKKTRFVRQARRELGLDNV 119
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V R+++ + + I RA A L +L P +
Sbjct: 120 EVVHGRVEQYRKAPSQ---IICRAFASLSDMLALMTPIMTD 157
>gi|149204375|ref|ZP_01881342.1| glucose-inhibited division protein B [Roseovarius sp. TM1035]
gi|149142260|gb|EDM30307.1| glucose-inhibited division protein B [Roseovarius sp. TM1035]
Length = 201
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRET +LE + L +KW+ +INLVS ++++ W RH DS ++ L P W+DL
Sbjct: 6 DVSRETQARLEIYADLLVKWNPRINLVSRKSLDEMWTRHFADSAQIHALAPPSVDHWVDL 65
Query: 79 GSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I V LIES +KA+FLR V+++T V RI++
Sbjct: 66 GSGGGFPGLVVAILAQDGGSPRRVTLIESDARKAAFLRVVIRETGLNAMVLNDRIEKV-- 123
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
DV+SARAL DL LLE+S L Q
Sbjct: 124 RPQEADVLSARALTDLSGLLEFSERHLAQ 152
>gi|218529838|ref|YP_002420654.1| methyltransferase GidB [Methylobacterium chloromethanicum CM4]
gi|254766897|sp|B7KV55|RSMG_METC4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218522141|gb|ACK82726.1| methyltransferase GidB [Methylobacterium chloromethanicum CM4]
Length = 211
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 84/152 (55%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 8 RVLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLSIAPEAT 67
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI+
Sbjct: 68 RWLDLGSGAGIPGLILALAGKERPGFHVRLVESNARKCAFLSETARLTGAPVTVHNARIE 127
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+T +++ ARALA L LL ++ P L
Sbjct: 128 AVIGTLTDTEIVCARALAPLSQLLAWTEPLLT 159
>gi|189039677|sp|A5FR82|RSMG_DEHSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 235
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+++ L + E +Y + ++ +INL + + +D I+H DS+ V +
Sbjct: 12 GISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVLAGIKGDEKLL 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG GFPG+ I +I+ G L+E+ KKA FL + K G ++ + R ++
Sbjct: 72 DVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLSGVEIISQRAEDT 128
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPW 163
Q ++++RA+AD+ TL E + P+
Sbjct: 129 AQNPLYRQKYSLVTSRAVADMATLAELTLPF 159
>gi|189040863|sp|A3QJS0|RSMG_SHELP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 207
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ + ++L F + KW+K NL S E IRH+ DSL H +ID+G+G
Sbjct: 18 TPKQKQQLLDFVAMLAKWNKAYNLTSVRDPEQMLIRHIMDSLAASP-HLVGERFIDVGTG 76
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PGI +I E L++S K+ F + V + A EA Q
Sbjct: 77 PGLPGIPLAIMNPDKE---FVLLDSLGKRIRFQKQVQFELAIGNISSVESRVEAYQPEEK 133
Query: 142 CDVISARALADLDTLLEYSFPW 163
D + +RA A + +L++
Sbjct: 134 FDGVLSRAFASIQDMLQWCHHL 155
>gi|60681565|ref|YP_211709.1| 16S rRNA methyltransferase GidB [Bacteroides fragilis NCTC 9343]
gi|81315369|sp|Q5LDN0|RSMG_BACFN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|60492999|emb|CAH07778.1| putative glucose-inhibited cell division protein [Bacteroides
fragilis NCTC 9343]
Length = 206
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 14 YLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 3 LLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARIIRFR 62
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
S +DLG+GGGFPGI +I + +L++S KK V + F
Sbjct: 63 AGSSVMDLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTF-- 117
Query: 131 RIQEAPQMITTCDVISARALADLDTLLE 158
R A + T D + +RA+ L L++
Sbjct: 118 RHARAEEEKQTFDFVVSRAVMPLADLIK 145
>gi|73748586|ref|YP_307825.1| 16S rRNA methyltransferase GidB [Dehalococcoides sp. CBDB1]
gi|123619642|sp|Q3ZXE0|RSMG_DEHSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|73660302|emb|CAI82909.1| methyltransferase GidB [Dehalococcoides sp. CBDB1]
Length = 235
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+++ L + E +Y + ++ +INL + + +D I+H DS+ V +
Sbjct: 12 GISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVLAGIKGDEKLL 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG GFPG+ I +I+ G L+E+ KKA FL + K G ++ + R ++
Sbjct: 72 DVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLSGVEIISQRAEDT 128
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPW 163
Q ++++RA+AD+ TL E + P+
Sbjct: 129 AQNPLYRQKYSLVTSRAVADMATLAELTLPF 159
>gi|227500995|ref|ZP_03931044.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
gi|227216768|gb|EEI82166.1| glucose inhibited division protein B [Anaerococcus tetradius ATCC
35098]
Length = 210
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L+ + NL + + + I+H +DSL V +D+G+G GFPG+
Sbjct: 6 QIYMDYLLEVNAHTNLTAITNPREIEIKHFKDSLTVLSYIKEKDKVLDIGAGAGFPGLPL 65
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISA 147
I+ + + LI+S NKK F+ V++K + + R ++ A + + DV+ +
Sbjct: 66 RIE----KDFDLTLIDSVNKKVVFMNEVIEKLGLKNTRAIHTRAEDYAREKRESFDVVVS 121
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ TL EY+ P+L
Sbjct: 122 RAVANMATLSEYALPFLK 139
>gi|313146687|ref|ZP_07808880.1| glucose-inhibited division protein B [Bacteroides fragilis 3_1_12]
gi|313135454|gb|EFR52814.1| glucose-inhibited division protein B [Bacteroides fragilis 3_1_12]
Length = 206
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 2 ELLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +DLG+GGGFPGI +I + +L++S KK V + F
Sbjct: 62 RPGSKVMDLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTF- 117
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLE 158
R A + T D + +RA+ L L++
Sbjct: 118 -RHARAEEEKQTFDFVVSRAVMPLADLIK 145
>gi|160886034|ref|ZP_02067037.1| hypothetical protein BACOVA_04040 [Bacteroides ovatus ATCC 8483]
gi|237716320|ref|ZP_04546801.1| glucose-inhibited division protein B [Bacteroides sp. D1]
gi|237721001|ref|ZP_04551482.1| glucose-inhibited division protein B [Bacteroides sp. 2_2_4]
gi|262407923|ref|ZP_06084471.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_22]
gi|293373034|ref|ZP_06619403.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CMC 3f]
gi|294646731|ref|ZP_06724354.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CC 2a]
gi|294807740|ref|ZP_06766533.1| 16S rRNA methyltransferase GidB [Bacteroides xylanisolvens SD CC
1b]
gi|299145414|ref|ZP_07038482.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_23]
gi|156108847|gb|EDO10592.1| hypothetical protein BACOVA_04040 [Bacteroides ovatus ATCC 8483]
gi|229443967|gb|EEO49758.1| glucose-inhibited division protein B [Bacteroides sp. D1]
gi|229449836|gb|EEO55627.1| glucose-inhibited division protein B [Bacteroides sp. 2_2_4]
gi|262354731|gb|EEZ03823.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_22]
gi|292632102|gb|EFF50711.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CMC 3f]
gi|292637891|gb|EFF56286.1| 16S rRNA methyltransferase GidB [Bacteroides ovatus SD CC 2a]
gi|294445176|gb|EFG13850.1| 16S rRNA methyltransferase GidB [Bacteroides xylanisolvens SD CC
1b]
gi|298515905|gb|EFI39786.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_23]
Length = 206
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E ++ Y L+ W+ KIN++S +E+ + HV SL + ++ + + +D
Sbjct: 10 DLTEEQRKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKVIQFRPGTSIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LG+GGGFPGI +I ++ +L++S KK V + F R A +
Sbjct: 70 LGTGGGFPGIPLAILFPEVK---FHLVDSIGKKVRVATEVANAIGLKNVTF--RHARAEE 124
Query: 138 MITTCDVISARALADLDTLLE 158
T D + +RA+ L L++
Sbjct: 125 EKRTFDFVVSRAVMPLADLIK 145
>gi|226491241|ref|NP_001144818.1| hypothetical protein LOC100277897 [Zea mays]
gi|195647450|gb|ACG43193.1| hypothetical protein [Zea mays]
Length = 285
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---------- 70
+S ++ + L+W++++NL + + + RHV DSL +
Sbjct: 53 LSPPQQRQITVYVDTLLEWNQRMNLTAXTDEAEVMARHVADSLAMLPPLERVYRGRSTSA 112
Query: 71 ----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
ID+GSG G PG+I ++ S + L+ES + +FL + V+
Sbjct: 113 GGAIDGVRLIDVGSGAGLPGLILAVARPSWK---FTLLESMRXRCTFLEHAVEXMNLSNV 169
Query: 127 -VFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
V R ++ Q + D+++ARA+ +L L EY P +
Sbjct: 170 DVVCDRAEKVGQSXDFRESYDIVAARAVXELKVLAEYCIPLVR 212
>gi|189045877|sp|B0UWH2|RSMG_HAES2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 9 ILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ + N+LL + + E+L L KW+K NL S + ++H+ DS+ V
Sbjct: 1 MEKLNFLLKNTALLPTNLQKERLVQLVLLLNKWNKAYNLTSVRDPMEMLVKHILDSIVVS 60
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+I+ID+G+G G PG+ +I + L++S K+ SF+R V++
Sbjct: 61 PYL-QGNIFIDVGTGPGLPGLPLAIINPDKK---FFLLDSLGKRISFIRNAVRELELTNV 116
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++E + D + +RA A L + E+ L +
Sbjct: 117 EPVLSRVEEF-KPDHQFDGVLSRAFASLKDMTEWCQHLLTDQ 157
>gi|158335573|ref|YP_001516745.1| methyltransferase GidB [Acaryochloris marina MBIC11017]
gi|189039368|sp|B0C384|RSMG_ACAM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|158305814|gb|ABW27431.1| methyltransferase GidB [Acaryochloris marina MBIC11017]
Length = 256
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQL-------- 68
+ + E ++ E + L ++ ++++NL + DFW +H+ DSL +
Sbjct: 18 GWQPTPEQEQQFERLFQLIVQANQQLNLTRITDPPDFWEKHLWDSLVGIAPWLQPDSSIQ 77
Query: 69 --------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
H +P ID+G+GGGFPG+ +I + + L++S KK +FL+ V +
Sbjct: 78 RQVSFSVDHSHPLKVIDIGTGGGFPGLPIAIIKPTWR---ITLLDSTQKKLAFLQQVNAE 134
Query: 121 TAARGKVFAC-RIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
C R + Q + D+ RA+ EY+ P L
Sbjct: 135 LGLENVETCCDRAENLGQQSPYRESFDLAVIRAVGPASVCAEYALPLLA 183
>gi|307823024|ref|ZP_07653254.1| methyltransferase GidB [Methylobacter tundripaludum SV96]
gi|307735799|gb|EFO06646.1| methyltransferase GidB [Methylobacter tundripaludum SV96]
Length = 211
Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
IL + NV+ E +++L F L KW+K NL + E+ H+ DSL +
Sbjct: 4 CREILVSGIASLNLNVTDEKIDQLLSFIKLIEKWNKAYNLTAIRDREEMARLHILDSLAI 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G+G G PGI +I L I+ L++S KK F++ VV + +
Sbjct: 64 VPHI-EGKRVIDIGTGAGLPGIPLAICLPEID---FTLLDSNAKKTRFVQQVVLELKLKN 119
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V R++ T D + RA A L +++ + L +
Sbjct: 120 VEVLHSRVE-NYHPEKTYDAVLTRAFAGLSDIVKLTAHLLSK 160
>gi|298484213|ref|ZP_07002378.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D22]
gi|298269626|gb|EFI11222.1| 16S rRNA methyltransferase GidB [Bacteroides sp. D22]
Length = 206
Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL + + + + +D
Sbjct: 10 DLTEEQRKQFAALYDLYIDWNSKINVISRKDIENLYEHHVLHSLGIAKTIQFRPGTSIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LG+GGGFPGI +I + +L++S KK V + F R A +
Sbjct: 70 LGTGGGFPGIPLAILFPEV---TFHLVDSIGKKVRVATEVANAIGLKNVTF--RHARAEE 124
Query: 138 MITTCDVISARALADLDTLLE 158
T D + +RA+ L L++
Sbjct: 125 EKRTFDFVVSRAVMPLADLIK 145
>gi|255691824|ref|ZP_05415499.1| 16S rRNA methyltransferase GidB [Bacteroides finegoldii DSM 17565]
gi|260622545|gb|EEX45416.1| 16S rRNA methyltransferase GidB [Bacteroides finegoldii DSM 17565]
Length = 206
Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ + + +D
Sbjct: 10 DLTEEQRKQFAALYDLYIDWNSKINVISRKDIENLYEHHVLHSLGIAKVIQFRPGTSVMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 70 LGTGGGFPGIPLAILFPETQ---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
+M D + +RA+ L L++
Sbjct: 127 RM---FDFVVSRAVMPLADLIK 145
>gi|163851011|ref|YP_001639054.1| methyltransferase GidB [Methylobacterium extorquens PA1]
gi|238687374|sp|A9W327|RSMG_METEP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|163662616|gb|ABY29983.1| methyltransferase GidB [Methylobacterium extorquens PA1]
Length = 211
Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 85/152 (55%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++L+ ++VSRET L+ + +W NLV +T+++ W RH+ D+L++ + P +
Sbjct: 8 HVLSEHHVSRETAASLDLYVAQLTRWQTVKNLVGPATLKEVWHRHIADALQLLTVAPEAT 67
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+DLGSG G PG+I ++ G V L+ES +K +FL + T A V RI+
Sbjct: 68 RWLDLGSGAGIPGLILALAGKERPGFHVGLVESNARKCAFLSETARLTGAPVTVHNARIE 127
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+T +++ ARALA L LL ++ P L
Sbjct: 128 AVIGTLTDTEIVCARALAPLSQLLAWTEPLLT 159
>gi|78224741|ref|YP_386488.1| glucose inhibited division protein [Geobacter metallireducens
GS-15]
gi|123570638|sp|Q39PR1|RSMG_GEOMG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78195996|gb|ABB33763.1| 16S rRNA m(7)G-527 methyltransferase [Geobacter metallireducens
GS-15]
Length = 220
Score = 157 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 5/164 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++ +L ++ + K F KW++KINL + +T + ++H DSL
Sbjct: 4 EAKDLLVRGAAQLGVELTSAQVGKFALFAAELRKWNRKINLTAITTEREIALKHFVDSLS 63
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +DLGSGGGFP I +I E V +++ KK F R++ +
Sbjct: 64 LCRAVGKGGKLLDLGSGGGFPVIPFAILHPKSE---VVSVDAVEKKIIFQRHMGRLLGLS 120
Query: 125 G-KVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R +E A + D I +RA +D+ T + + P L
Sbjct: 121 CFQSIHARGEELAGRFAGHFDWIVSRAFSDIPTFVRMALPLLRP 164
>gi|332879368|ref|ZP_08447065.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682788|gb|EGJ55688.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 206
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWID 77
+S + E+ L+ W+ KIN++S +++ + HV SL + + + +D
Sbjct: 10 ELSEKQTEQFHQLDALYHDWNAKINVISRKDIDNLYEHHVLHSLGIAEFTRFKSGTEIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I +L++S KK V ++ F CR +E
Sbjct: 70 LGTGGGFPGIPLAIMFPDCH---FHLVDSIGKKIKVCMEVARELGVENVTFRHCRAEE-- 124
Query: 137 QMITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 125 -EKAKFDFVVSRAVMPLADLVK 145
>gi|86132587|ref|ZP_01051180.1| glucose inhibited division protein [Dokdonia donghaensis MED134]
gi|85816829|gb|EAQ38014.1| glucose inhibited division protein [Dokdonia donghaensis MED134]
Length = 209
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + +++ +E+ L+ W+ KIN+VS +++ ++RHV SL + ++ +
Sbjct: 2 DIILKYFPDLTDTQIEQFSKLKDLYQDWNLKINVVSRKDIDEIYLRHVLHSLGIAKVQTF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
+ +D+G+GGGFPG+ +I + +L++S KK + VV+
Sbjct: 62 NPGASIMDVGTGGGFPGVPLAILHPEVN---FHLVDSIGKKIKVVNEVVEGLGITNVKTT 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ P D I +RA+A ++T + + + +K
Sbjct: 119 NDRVENVP---GQYDFIVSRAVAQMETFVRWVRGHIAKK 154
>gi|269123846|ref|YP_003306423.1| methyltransferase GidB [Streptobacillus moniliformis DSM 12112]
gi|268315172|gb|ACZ01546.1| methyltransferase GidB [Streptobacillus moniliformis DSM 12112]
Length = 231
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSI 74
L+ + S + L+KL + + ++ +K +NL + +D +H D+L + ++
Sbjct: 11 LSNIDTSEDKLDKLIIYLEMLIEKNKVMNLTAIRDGKDMIEKHFIDALLLTKIIRSEEKT 70
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
IDLG+G GFPG++ ++ L++S KK +FL V+++ + + R +
Sbjct: 71 LIDLGTGAGFPGLVLAVYYPDKN---FLLVDSVKKKVAFLDEVIERLKLKNVKTSSERAE 127
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWLY 165
E + D+ R +A+L +LEY P++
Sbjct: 128 EIVKKYREKFDLALCRGVANLRIILEYMIPFIK 160
>gi|147669346|ref|YP_001214164.1| methyltransferase GidB [Dehalococcoides sp. BAV1]
gi|146270294|gb|ABQ17286.1| 16S rRNA m(7)G-527 methyltransferase [Dehalococcoides sp. BAV1]
Length = 256
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+++ L + E +Y + ++ +INL + + +D I+H DS+ V +
Sbjct: 33 GISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVLAGIKGDEKLL 92
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG GFPG+ I +I+ G L+E+ KKA FL + K G ++ + R ++
Sbjct: 93 DVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLSGVEIISQRAEDT 149
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPW 163
Q ++++RA+AD+ TL E + P+
Sbjct: 150 AQNPLYRQKYSLVTSRAVADMATLAELTLPF 180
>gi|301163121|emb|CBW22670.1| putative glucose-inhibited cell division protein [Bacteroides
fragilis 638R]
Length = 206
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 14 YLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
LL + +++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ +
Sbjct: 3 LLLKYFPDLTEEQRKQFAALYELYIDWNSKINVISRKDIENLYEHHVLHSLGIARVIRFR 62
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
S +DLG+GGGFPGI +I + +L++S KK V + F
Sbjct: 63 AGSSVMDLGTGGGFPGIPLAILFPDTK---FHLVDSIGKKVRVATEVANAIGLKNVTF-- 117
Query: 131 RIQEAPQMITTCDVISARALADLDTLLE 158
R A + T D + +RA+ L L++
Sbjct: 118 RHARAEEEKQTFDFVVSRAVMPLADLIK 145
>gi|302800848|ref|XP_002982181.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
gi|300150197|gb|EFJ16849.1| hypothetical protein SELMODRAFT_56649 [Selaginella moellendorffii]
Length = 225
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 14/156 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-------PYPS 73
+ + + + L W++++NL S + ++ RH+ DSL + +
Sbjct: 5 LDPSQSKLVSAYIDKLLVWNQRMNLTSVTDRKEMMERHIRDSLSLLPVIEKHCSLSDGNL 64
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
+D+GSG G PGII I + + + LIES KK FL V + + V R
Sbjct: 65 KVVDIGSGAGLPGIIFGIARPNWK---ITLIESIQKKCDFLEDAVLAVSLQNVSVVRARA 121
Query: 133 QE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E + T DV ARA+A++ L E P++
Sbjct: 122 EEKGRDAEFRETFDVAVARAVAEMRVLAELCLPFVA 157
>gi|331703898|ref|YP_004400585.1| methyltransferase GidB (glucose inhibited division protein B)
[Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328802453|emb|CBW54608.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 231
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIW 75
+ +++E KL +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 12 KNFTINQEIKNKLNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
D+G+G GFPG++ I +I+ + LIES NKKA+FL+Y+VQK ++ R +E
Sbjct: 72 ADIGTGAGFPGVVLKIFFPNIK---LTLIESNNKKANFLKYLVQKLELNDVEILNKRAEE 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
Q D++ +RA+A LD +LE +
Sbjct: 129 LNQYKEQFDIVISRAVAYLDIILELGVQLVK 159
>gi|289432612|ref|YP_003462485.1| methyltransferase GidB [Dehalococcoides sp. GT]
gi|288946332|gb|ADC74029.1| methyltransferase GidB [Dehalococcoides sp. GT]
Length = 256
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+++ L + E +Y + ++ +INL + + +D I+H DS+ V +
Sbjct: 33 GISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQIKHFLDSVSLVLAGIKGDEKLL 92
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG GFPG+ I +I+ G L+E+ KKA FL + K G ++ + R ++
Sbjct: 93 DVGSGAGFPGLPLKILFPAIQLG---LLEATQKKARFLSEITVKLGLSGVEIISQRAEDT 149
Query: 136 PQ---MITTCDVISARALADLDTLLEYSFPW 163
Q ++++RA+AD+ TL E + P+
Sbjct: 150 AQNPLYRQKYSLVTSRAVADMATLAELTLPF 180
>gi|237749325|ref|ZP_04579805.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes OXCC13]
gi|229380687|gb|EEO30778.1| ribosomal RNA small subunit methyltransferase G [Oxalobacter
formigenes OXCC13]
Length = 220
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ + ++KL + L KW+ NL + + H+ DSL V
Sbjct: 18 LIDGIIALNIRLTNDQVKKLLDYLVLLDKWNSTYNLTAVRNPQAMLTYHLLDSLAVVPYL 77
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
P +D+GSGGG PG++ SI ++ V++I+ +KK +FL V + V+
Sbjct: 78 PETRKLLDVGSGGGLPGLVLSIVYPDMK---VSMIDIVHKKTAFLNQVKIELGLDNVTVY 134
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E ++ D I +RA A L + S L +
Sbjct: 135 TGRVEEL-EVEEPFDGIISRAFASLHDFVSLSAHLLSE 171
>gi|302825464|ref|XP_002994346.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
gi|300137758|gb|EFJ04589.1| hypothetical protein SELMODRAFT_138488 [Selaginella moellendorffii]
Length = 272
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 14/156 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-------PYPS 73
+ + + + L W++++NL S + ++ RH+ DSL + +
Sbjct: 37 LDPSQSKLVSAYIDKLLDWNQRMNLTSVTDRKEVMERHIRDSLSLLPVIEKHCSLSDGSL 96
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
+D+GSG G PGII I S + + LIES KK FL V + + V R
Sbjct: 97 KVVDIGSGAGLPGIIFGIARPSWK---ITLIESIQKKCDFLEDAVLAVSLQNVSVVRARA 153
Query: 133 QEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+E + T DV ARA+A++ L E P++
Sbjct: 154 EEKGRDVEFRETFDVAVARAVAEMRVLAELCLPFVA 189
>gi|269926956|ref|YP_003323579.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
gi|269790616|gb|ACZ42757.1| methyltransferase GidB [Thermobaculum terrenum ATCC BAA-798]
Length = 251
Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF------QLHPY 71
V + LE L +WS K N+ + + + +H+ DSL V
Sbjct: 24 GIEVEEDQLELFLALADLVNEWSYKYNITAIRSRREILTKHIIDSLSVAIGHWQINDGKV 83
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P+ +D+GSG GFP + +I I V +E+ KKASF+ + V R
Sbjct: 84 PANLLDVGSGAGFPSLPIAIAFPDIN---VTALEAIRKKASFIAAASESLGLNVTVLNQR 140
Query: 132 IQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ P + +++ ARA+A + TLLEY P++
Sbjct: 141 AEVAAHLPDLREAFELVVARAVAYMPTLLEYCLPFVR 177
>gi|170750485|ref|YP_001756745.1| methyltransferase GidB [Methylobacterium radiotolerans JCM 2831]
gi|193806447|sp|B1M187|RSMG_METRJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170657007|gb|ACB26062.1| methyltransferase GidB [Methylobacterium radiotolerans JCM 2831]
Length = 211
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+L VSRET E+L+ + +W NLV +T+ + W RH++D+L++ L P
Sbjct: 7 ARVLAAAGVSRETAERLDLYVAQLRRWQPIKNLVGPATLTEVWSRHIDDALQLLDLAPEA 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+DLGSG G PG+I +I G V+L+ES +K +FL + T A +V RI
Sbjct: 67 RTWLDLGSGAGIPGLILAIAGRE-RGVRVDLVESNARKCAFLTETARLTEAPARVRNARI 125
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ DV+ ARALA + LL ++ P L
Sbjct: 126 EAVIGEYGGTDVVCARALAPMTQLLAWTEPLLK 158
>gi|282900470|ref|ZP_06308419.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194663|gb|EFA69611.1| Glucose inhibited division protein [Cylindrospermopsis raciborskii
CS-505]
Length = 249
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-------VFQLHP 70
+ + E +L+ Y L + +++INL + ++FW +H+ DSLR
Sbjct: 21 NWQPTIEQGNQLQKLYDLIVLANRQINLTRITEPKEFWEKHLWDSLRGVAPQQHFLPELN 80
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
ID+GSG GFPG+ I + V L++S KK +F+ ++K
Sbjct: 81 AAGSIIDIGSGAGFPGLPIGIVFPHYQ---VTLLDSTRKKVNFINSAIEKLPLSNATTIL 137
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E Q ++ RA+A EY+ P + +
Sbjct: 138 GRAEEIGQDTPYREKYNLAVIRAVASASICSEYALPLIKK 177
>gi|126176557|ref|YP_001052706.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS155]
gi|153002871|ref|YP_001368552.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS185]
gi|160877618|ref|YP_001556934.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS195]
gi|217975458|ref|YP_002360209.1| 16S rRNA methyltransferase GidB [Shewanella baltica OS223]
gi|304412697|ref|ZP_07394300.1| methyltransferase GidB [Shewanella baltica OS183]
gi|307305838|ref|ZP_07585584.1| methyltransferase GidB [Shewanella baltica BA175]
gi|166224611|sp|A3DAS4|RSMG_SHEB5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224612|sp|A6WUK0|RSMG_SHEB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189040823|sp|A9KX16|RSMG_SHEB9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766901|sp|B8EDW0|RSMG_SHEB2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|125999762|gb|ABN63837.1| methyltransferase GidB [Shewanella baltica OS155]
gi|151367489|gb|ABS10489.1| methyltransferase GidB [Shewanella baltica OS185]
gi|160863140|gb|ABX51674.1| methyltransferase GidB [Shewanella baltica OS195]
gi|217500593|gb|ACK48786.1| methyltransferase GidB [Shewanella baltica OS223]
gi|304348907|gb|EFM13322.1| methyltransferase GidB [Shewanella baltica OS183]
gi|306911331|gb|EFN41757.1| methyltransferase GidB [Shewanella baltica BA175]
gi|315269816|gb|ADT96669.1| methyltransferase GidB [Shewanella baltica OS678]
Length = 206
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ L A + E ++L F + KW+K NL S E IRH+ DSL V
Sbjct: 3 SAQLEAYLAEINLPATAEQKKQLIDFVGMLNKWNKAYNLTSVRDPEAMLIRHIMDSLVVS 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ H +ID+G+G G PGI +I + L++S K+ F + V +
Sbjct: 63 K-HLQGERFIDVGTGPGLPGIPLAIMNPDKQ---FVLLDSLGKRIRFQKQVSFELGIHNI 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 119 SSVESRVEAYQPEQKFDGVLSRAFASIQDMLTWCHHL 155
>gi|253997704|ref|YP_003049768.1| methyltransferase GidB [Methylotenera mobilis JLW8]
gi|253984383|gb|ACT49241.1| methyltransferase GidB [Methylotenera mobilis JLW8]
Length = 225
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 9/165 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L + E +KL + L KW++ NL + + H+ DSL V
Sbjct: 18 QAKLENGLQEMGITLLPEQTQKLLDYVALIYKWNQVHNLTAVREPMEMVTLHILDSLSVL 77
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+D+G+G G P I +I L ++ V I++ KK SF+R V +
Sbjct: 78 AHI-ECKRLLDVGAGAGLPSIPLAICLPELQ---VTSIDAVQKKVSFMRQVKAELGLANF 133
Query: 126 KVFACRIQE----APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V RI+E + +M DVI +RA +++ ++ + L +
Sbjct: 134 SVIHGRIEEQTVPSKEMPEKFDVIISRAFSEIALFIKLTKHLLVE 178
>gi|163859297|ref|YP_001633595.1| glucose inhibited division protein B [Bordetella petrii DSM 12804]
gi|163263025|emb|CAP45328.1| glucose inhibited division protein B [Bordetella petrii]
Length = 295
Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D N LR V +KL + +W++ NL + E ++H+ DSL
Sbjct: 77 ADPNGRLRQACDSLGLRVEAAQADKLLAYLAQMQRWNRTYNLTAIRDPEQMLVQHLFDSL 136
Query: 64 RVFQLH------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
V + D+GSGGG PG++ +I + + + +++ KK +F+R +
Sbjct: 137 SVVDPLSRVVGADTAATVYDIGSGGGLPGVVLAIMRPTWQ---IGCVDAVEKKMAFVRQM 193
Query: 118 VQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A + R++E P CDV+ +RA A L+ +
Sbjct: 194 SGVLALPNLRALHARVEELP--PAGCDVVISRAFASLNDFASLA 235
>gi|284049395|ref|YP_003399734.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
gi|283953616|gb|ADB48419.1| methyltransferase GidB [Acidaminococcus fermentans DSM 20731]
Length = 237
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
L+A + +S + L++ + L L+ +K +NL + + E+ ++H+ DSL V+
Sbjct: 4 RETLKAAGEAAGFTLSEKQLDQFTRYADLLLETNKSLNLTAITDPEEVAVKHMVDSLLVY 63
Query: 67 QLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ +D+G+G GFPG+ I G V LI+S K+ +FL VV+ +
Sbjct: 64 DPERFHNHTIVDVGTGAGFPGLPLKIYDP---GMRVTLIDSLQKRLNFLEQVVKDLGLGQ 120
Query: 125 GKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A P + DV ARA+A L L EY P +
Sbjct: 121 VRCTHARAEDAGKDPALREKFDVAVARAVAALPVLAEYCLPLVR 164
>gi|294085214|ref|YP_003551974.1| glucose inhibited division protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664789|gb|ADE39890.1| Glucose inhibited division protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 219
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ + + + NVSRET++K + L KW K +NLV+ +T++ W RH+ DS
Sbjct: 15 SEMTPEMTPETVQDMLNVSRETIDKFAIYLALLEKWQKSVNLVARATLDIAWQRHILDSG 74
Query: 64 RVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ + P +D+GSG GFPG++ SI + V+++ES +KK FL+ V++K
Sbjct: 75 QLARYLPAGCKTILDVGSGAGFPGLVLSIM----QDATVHMVESDHKKTVFLQTVIRKLD 130
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V RI+ P M+ DVI+ARA A L + P +
Sbjct: 131 LSAVVHNERIESLPAMVP--DVITARAFAPLGKAITLLAPHMRP 172
>gi|224539434|ref|ZP_03679973.1| hypothetical protein BACCELL_04339 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518939|gb|EEF88044.1| hypothetical protein BACCELL_04339 [Bacteroides cellulosilyticus
DSM 14838]
Length = 206
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ ++ Y L+ W+ KIN++S +E+ + HV SL + ++ + + +D
Sbjct: 10 DLTEAQKQQFASLYDLYTDWNAKINVISRKDIENLYEHHVLHSLGIAKVIRFTPGTRIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK V + F R +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVK---FHLVDSIGKKVRVATEVANSIGLKNVTFRHARAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L LL+
Sbjct: 127 QL---FDFVVSRAVMPLADLLK 145
>gi|226327000|ref|ZP_03802518.1| hypothetical protein PROPEN_00860 [Proteus penneri ATCC 35198]
gi|225204837|gb|EEG87191.1| hypothetical protein PROPEN_00860 [Proteus penneri ATCC 35198]
Length = 176
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
+ KW+K NL S + IRH+ DS+ V Q +ID+G+G G PGI +I
Sbjct: 1 MLDKWNKAYNLTSVRDPQQMLIRHILDSIVVSQYL-EGEKFIDVGTGPGLPGIPLAIMRP 59
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADL 153
L++S K+ F++ V + + R++E Q D + +RA A +
Sbjct: 60 DHH---FVLLDSLGKRVRFMKQVQHELGLDNIEPVQYRVEE-YQTEQPFDGVISRAFASM 115
Query: 154 DTLLEYSFPWLYQK 167
+ +L + + ++
Sbjct: 116 NDMLSWCSHLVTEE 129
>gi|325285552|ref|YP_004261342.1| Ribosomal RNA small subunit methyltransferase G [Cellulophaga
lytica DSM 7489]
gi|324321006|gb|ADY28471.1| Ribosomal RNA small subunit methyltransferase G [Cellulophaga
lytica DSM 7489]
Length = 226
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++A+ + + +++ E + L+ W++KIN+VS +++ ++RHV S + +
Sbjct: 16 MKADIIFKYFPDLTEEQKQHFIQLEALYADWNQKINVVSRKDIDEIYLRHVLHSTGIAKF 75
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +D+G+GGGFPGI +I + L+++ KK +++VV
Sbjct: 76 QQFLPGTTVLDVGTGGGFPGIPLAILFPETQ---FTLVDAIGKKIKVVQHVVDGLGLTNV 132
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEY 159
R+++ + D I +RA+A + T + +
Sbjct: 133 TAKHMRVED---LDAKFDFIVSRAVAAMPTFVRW 163
>gi|159896713|ref|YP_001542960.1| 16S rRNA methyltransferase GidB [Herpetosiphon aurantiacus ATCC
23779]
gi|159889752|gb|ABX02832.1| methyltransferase GidB [Herpetosiphon aurantiacus ATCC 23779]
Length = 236
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L+ +S +++LE++ L +WS+++NLV+ ST+ + RH+ DS +
Sbjct: 3 DRELLQTTLAEWQLTLSTSQIDRLEHYVALLTQWSERMNLVAPSTLPEATRRHLLDSFSL 62
Query: 66 FQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
P+ D+GSG G PGI +I E V LIES +KKA FLR+V Q+
Sbjct: 63 ATTCEQAPASLADIGSGAGLPGIPLAILWPETE---VLLIESISKKAEFLRHVAQELQLE 119
Query: 124 RGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPW 163
R V R + + +++ARA+A+L TL EY P
Sbjct: 120 RVLVEVERAEVVGRERRWREHFALVTARAVANLATLAEYCLPL 162
>gi|152979952|ref|YP_001355328.1| 16S rRNA methyltransferase GidB [Janthinobacterium sp. Marseille]
gi|189045855|sp|A6T481|RSMG_JANMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151280029|gb|ABR88439.1| glucose inhibited division protein B [Janthinobacterium sp.
Marseille]
Length = 220
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 1 MKYCDSNSI---LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIR 57
MK D ++ L + N+S + KL + L KW+ NL + +
Sbjct: 1 MKAFDRPALTVLLVQGARDLSLNLSEAQITKLIDYLALMAKWNSVYNLTAVRDPVQMVTQ 60
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRY 116
H+ DSL +D+G+GGG PGI+ +I + + +++I++ +KK +FL
Sbjct: 61 HLLDSLAAVSAFSNAKNVLDVGAGGGLPGIVLAIWAAEAHPEMRISMIDTVHKKTAFLTQ 120
Query: 117 VVQKTAARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V + V+ R+++ Q DVI++RA ADL + +S L
Sbjct: 121 VKAELNLSNVSVYTARVEQ-WQAPQKFDVITSRAFADLSDFVNWSEHLLAD 170
>gi|256384435|gb|ACU79005.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256385267|gb|ACU79836.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455461|gb|ADH21696.1| 16S rRNA methyltransferase GidB [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 231
Score = 157 bits (397), Expect = 6e-37, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 5/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIW 75
+ +++E KL +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 12 KNFTINQEIKNKLNLYYQILIQENQKYNLTRITQLNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
D+G+G GFPG++ I +I+ + LIES NKKA+FL+Y+VQK ++ R++E
Sbjct: 72 ADIGTGAGFPGVVLKIFFPNIK---LTLIESNNKKANFLKYLVQKLELNDVEILNKRVEE 128
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D++ +RA+A LD +LE +
Sbjct: 129 LNEYKEQFDIVISRAVAYLDIILELGVQLVK 159
>gi|168334917|ref|ZP_02693037.1| methyltransferase GidB [Epulopiscium sp. 'N.t. morphotype B']
Length = 236
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDLGSGGGFPGII 88
+ L L+W++K+NL + + ++ +H DSL V L Y + +D+G+G GFPG++
Sbjct: 27 YKDLLLEWNQKLNLTAITKEDEIITKHFLDSLSVNMAVDLLKYKN-LVDVGTGAGFPGLV 85
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP---QMITTCDV 144
I + + L++S K+ +FL V++ + V R ++ Q D+
Sbjct: 86 LKIAYPHLN---IVLVDSLKKRLTFLDAVIEILKLKHVVTVHGRAEDIAKDVQYREKFDI 142
Query: 145 ISARALADLDTLLEYSFPWLY 165
S RA+++L TL EY+ P++
Sbjct: 143 CSPRAVSNLATLSEYALPFVR 163
>gi|89889332|ref|ZP_01200843.1| glucose-inhibited methyltransferase division protein, gidB
[Flavobacteria bacterium BBFL7]
gi|89517605|gb|EAS20261.1| glucose-inhibited methyltransferase division protein, gidB
[Flavobacteria bacterium BBFL7]
Length = 213
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---------FQLHP 70
++S +E+ L+ +W+ +IN++S ++ + RHV SL + P
Sbjct: 11 HLSDHQMEQFAQLGDLYAEWNSQINVISRKDIDQLYTRHVLHSLGIACVVRFRESLPNTP 70
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+ +D+G+GGGFPGI +I +LI++ KK + VV+ +
Sbjct: 71 GGARVMDVGTGGGFPGIPLAIMFPKTN---FHLIDAIGKKIKVVDTVVEALQLKNVTTQH 127
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYS 160
R ++ D I +RA+ ++ + ++
Sbjct: 128 GRAEKVK---GKFDFIVSRAVTNMPDFVSWT 155
>gi|189040864|sp|Q07VT4|RSMG_SHEFN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 206
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ ++L F + KW+K NL + E IRHV DSL V +ID+G+G
Sbjct: 18 TELQQKQLIGFVEMLDKWNKAYNLTAVRDPEQMLIRHVMDSLTVSPYL-EGQRFIDVGTG 76
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PGI +I + L++S K+ F + V + EA
Sbjct: 77 PGLPGIPLAIMNPDKQ---FVLLDSLGKRIRFQKQVQFELKINNITSVESRVEAYIPEIK 133
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A + +L + +K
Sbjct: 134 FDGVLSRAFASIQDMLSWCHHLPTEK 159
>gi|114565205|ref|YP_752719.1| glucose-inhibited division protein B [Shewanella frigidimarina
NCIMB 400]
gi|114336498|gb|ABI73880.1| methyltransferase GidB [Shewanella frigidimarina NCIMB 400]
Length = 213
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ ++L F + KW+K NL + E IRHV DSL V +ID+G+G
Sbjct: 25 TELQQKQLIGFVEMLDKWNKAYNLTAVRDPEQMLIRHVMDSLTVSPYL-EGQRFIDVGTG 83
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G PGI +I + L++S K+ F + V + EA
Sbjct: 84 PGLPGIPLAIMNPDKQ---FVLLDSLGKRIRFQKQVQFELKINNITSVESRVEAYIPEIK 140
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
D + +RA A + +L + +K
Sbjct: 141 FDGVLSRAFASIQDMLSWCHHLPTEK 166
>gi|255320528|ref|ZP_05361709.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens SK82]
gi|262378420|ref|ZP_06071577.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens
SH164]
gi|255302500|gb|EET81736.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens SK82]
gi|262299705|gb|EEY87617.1| 16S rRNA methyltransferase GidB [Acinetobacter radioresistens
SH164]
Length = 210
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ +++ ETL L + + W+K NL + ++ ++H+ DSL + +
Sbjct: 6 QELKQGSQALGLSLNDETLGLLLQYQDALVLWNKAYNLTAIRDPKEMLVKHLLDSLSILK 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ E L++S KK FL+ + + +
Sbjct: 66 DLP-SGRLLDIGTGGGMPGMIIALCQPEREC---VLLDSNGKKIRFLKQFIADLKLKNVI 121
Query: 128 -FACRI--QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R+ +E+ + DVI++RA A L + S P+++
Sbjct: 122 AVQTRVENEESIHELGQFDVITSRAFASLTDFVLASEPYMH 162
>gi|134096564|ref|YP_001101639.1| 16S rRNA methyltransferase GidB [Herminiimonas arsenicoxydans]
gi|189045854|sp|A4GAI1|RSMG_HERAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|133740467|emb|CAL63518.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Herminiimonas arsenicoxydans]
Length = 218
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ +S + KL + L +KW+ NL + +H+ DSL +D
Sbjct: 21 SLTLSEAQITKLIDYLALMVKWNSVYNLTAVRDPLQMVTQHLLDSLAAVSAFAGAKNVLD 80
Query: 78 LGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
+G+GGG PGI+ +I + E + V+LI++ +KK +FL V + E
Sbjct: 81 VGAGGGLPGIVLAIWAAEAEPEMRVSLIDTVHKKTAFLTQVKAELGLANVSVHTARVEQW 140
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
DVI++RA A+L+ + +S L +
Sbjct: 141 NAPHKFDVITSRAFAELNDFVNWSGHLLDE 170
>gi|148266436|ref|YP_001233142.1| methyltransferase GidB [Geobacter uraniireducens Rf4]
gi|189039394|sp|A5G9V1|RSMG_GEOUR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146399936|gb|ABQ28569.1| 16S rRNA m(7)G-527 methyltransferase [Geobacter uraniireducens Rf4]
Length = 219
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L +++ L + KWSKKINL + T E+ ++H DSL + ++
Sbjct: 8 LLVTGATELGLHLTSAQLGNFYTYASELTKWSKKINLTAIKTDEEIALKHFVDSLTLAKV 67
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+D+GSGGGFP I I L + V +++ KK F R+V + +
Sbjct: 68 VKNKGRLLDIGSGGGFPAIPLKIVLHDLH---VMSVDAVEKKVIFQRHVARLLHLHDFEA 124
Query: 128 FACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E A D I +RA +D+ T + P L
Sbjct: 125 VHVRGEELAKSHAGQFDWIVSRAFSDIPTFAAMTLPLLK 163
>gi|218130857|ref|ZP_03459661.1| hypothetical protein BACEGG_02452 [Bacteroides eggerthii DSM 20697]
gi|317476051|ref|ZP_07935303.1| 16S rRNA methyltransferase GidB [Bacteroides eggerthii 1_2_48FAA]
gi|217987201|gb|EEC53532.1| hypothetical protein BACEGG_02452 [Bacteroides eggerthii DSM 20697]
gi|316907689|gb|EFV29391.1| 16S rRNA methyltransferase GidB [Bacteroides eggerthii 1_2_48FAA]
Length = 206
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E ++ Y L+ W+ KIN++S +E+ + HV SL + Q+ + + +D
Sbjct: 10 DLTEEQKKQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAQIIRFKPGTKIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK + + R +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVRVATEIANSIGLKNVTTRHARAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L LL+
Sbjct: 127 QL---FDFVVSRAVMPLADLLK 145
>gi|187925873|ref|YP_001897515.1| 16S rRNA methyltransferase GidB [Burkholderia phytofirmans PsJN]
gi|187717067|gb|ACD18291.1| methyltransferase GidB [Burkholderia phytofirmans PsJN]
Length = 227
Score = 156 bits (396), Expect = 7e-37, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++S L+KL + L KW+ NL + I+H+ DSL +
Sbjct: 15 PLLADGVRELGLDLSDAQLDKLLDYVALLSKWNAVYNLTAIRDPRQMLIQHILDSLSIVP 74
Query: 68 LH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
PS +D+GSGGG PGI+ +I LS V + + +KK +F +
Sbjct: 75 HLAPLGPSSVLDVGSGGGLPGIVLAIVLSEW---TVTVNDIVHKKTAFQAQAKAELGLAN 131
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ ++ DVI +RA A+L + + + ++
Sbjct: 132 LSVVTGRVETLQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|319902422|ref|YP_004162150.1| 16S rRNA m(7)G-527 methyltransferase [Bacteroides helcogenes P
36-108]
gi|319417453|gb|ADV44564.1| 16S rRNA m(7)G-527 methyltransferase [Bacteroides helcogenes P
36-108]
Length = 207
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ E ++ Y L+L W+ KIN++S +++ + HV SL + Q+ + + +DL
Sbjct: 11 LTEEQKKQYAALYDLYLDWNSKINVISRKDIDNLYEHHVLHSLGIAQVIRFKPGTRIMDL 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I ++ +LI+S KK V + F R A +
Sbjct: 71 GTGGGFPGIPLAILFPEVQ---FHLIDSIGKKIRVAEEVAGSIGLKNTTF--RHARAEEE 125
Query: 139 ITTCDVISARALADLDTLLE 158
T D + +RA+ L L++
Sbjct: 126 KQTFDFVVSRAVMPLSDLMK 145
>gi|193806479|sp|A9IJ46|RSMG_BORPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 255
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D N LR V +KL + +W++ NL + E ++H+ DSL
Sbjct: 37 ADPNGRLRQACDSLGLRVEAAQADKLLAYLAQMQRWNRTYNLTAIRDPEQMLVQHLFDSL 96
Query: 64 RVFQLH------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
V + D+GSGGG PG++ +I + + + +++ KK +F+R +
Sbjct: 97 SVVDPLSRVVGADTAATVYDIGSGGGLPGVVLAIMRPTWQ---IGCVDAVEKKMAFVRQM 153
Query: 118 VQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A + R++E P CDV+ +RA A L+ +
Sbjct: 154 SGVLALPNLRALHARVEELP--PAGCDVVISRAFASLNDFASLA 195
>gi|222056911|ref|YP_002539273.1| methyltransferase GidB [Geobacter sp. FRC-32]
gi|221566200|gb|ACM22172.1| methyltransferase GidB [Geobacter sp. FRC-32]
Length = 210
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L +S + +EKL + KW++KINL + + ED I+H DSL + +
Sbjct: 1 MLECGAADFGLQLSFDQVEKLALYAKELKKWNRKINLTAIKSDEDIVIKHFVDSLVLAKF 60
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
++ +D+GSG GFP I I + ++ V +++ KK F R V + G +
Sbjct: 61 VKADAMLVDIGSGAGFPCIPLKIIMPALR---VTSVDAVEKKIIFQRNVARLIGLAGFEA 117
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R ++ Q D + +RA +D+ T + + +
Sbjct: 118 VHGRAEQL-QPDNKADAVVSRAFSDILTFAGMAKGLMKPE 156
>gi|253702730|ref|YP_003023919.1| methyltransferase GidB [Geobacter sp. M21]
gi|259495496|sp|C6DYR8|RSMG_GEOSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|251777580|gb|ACT20161.1| methyltransferase GidB [Geobacter sp. M21]
Length = 217
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ + LE L F KW++KINL + + E+ ++H+ DSL + +
Sbjct: 7 ELLKKGAAELGVQLDAAQLESLNLFAEELKKWNRKINLTAITGDEEIALKHLVDSLSLLK 66
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
P +D+GSGGGFP I I +E V ++ KK SF + V+ G
Sbjct: 67 AVRGPGRLLDIGSGGGFPCIPVKIVQPDLEMVSV---DAVVKKISFQKQAVRLLNLTGFT 123
Query: 127 VFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R + A + + D + +RA +D+ + + + P L +
Sbjct: 124 ALHVRAETLAQEYAASFDWVVSRAFSDIPSFVAMALPVLKPE 165
>gi|254447601|ref|ZP_05061067.1| methyltransferase GidB [gamma proteobacterium HTCC5015]
gi|198262944|gb|EDY87223.1| methyltransferase GidB [gamma proteobacterium HTCC5015]
Length = 225
Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L KW+K NL + H+ DSL + +D+G+G G PGI +I
Sbjct: 40 YLALLEKWNKAYNLTAVRDPSKMVSHHLLDSLAIAPFI-QGECILDVGTGAGLPGIPLAI 98
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISARAL 150
+ L++S KK F+ ++ V R++ D I++RA
Sbjct: 99 AFPEWQ---FTLLDSNGKKTRFVSAAKRELGLTNVDVVQARVETLAVERG-FDTITSRAF 154
Query: 151 ADLDTLLEYSFPWLYQ 166
++L ++E++ L
Sbjct: 155 SELQPMMEWTQHLLAP 170
>gi|332885399|gb|EGK05648.1| ribosomal RNA small subunit methyltransferase G [Dysgonomonas
mossii DSM 22836]
Length = 206
Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + N++ + ++ Y L+ W+ KIN++S +E+ + HV SL + +L +
Sbjct: 2 DIILKYFPNITEKQKQQFAALYDLYADWNSKINVISRKDIENLYTHHVLHSLGIAKLIQF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF- 128
S +D+G+GGGFPG+ +I L++S KK V F
Sbjct: 62 KDGSKIMDVGTGGGFPGVPLAILFPKCN---FLLVDSIGKKVRVATEVSSAIGLENIQFR 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLE 158
CR +E D + +RA+ L L++
Sbjct: 119 HCRAEEVK---EQFDFVVSRAVMPLPDLVK 145
>gi|56694930|ref|YP_165275.1| glucose-inhibited division protein B [Ruegeria pomeroyi DSS-3]
gi|81558750|sp|Q5LWF2|RSMG_SILPO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56676667|gb|AAV93333.1| glucose-inhibited division protein B [Ruegeria pomeroyi DSS-3]
Length = 204
Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 62/150 (41%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
NT NVSRET E+L+ F L KW+ +INLVS ++ED W RH+ DS++VF+ P +W+
Sbjct: 7 NTLNVSRETFERLKIFADLVHKWNPRINLVSKRSLEDLWTRHIIDSIQVFRNAPKGDLWV 66
Query: 77 DLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSGGGFPG+I +I + + +ES +K++FLR ++ +V + RI+
Sbjct: 67 DLGSGGGFPGLICAILAAEEKPETQFICVESDQRKSAFLRSAARECGIACQVISERIEHL 126
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D++SARAL DL LL ++ L
Sbjct: 127 DPLD--ADILSARALTDLTGLLGFAERHLK 154
>gi|197120415|ref|YP_002140842.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter bemidjiensis
Bem]
gi|197089775|gb|ACH41046.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter bemidjiensis
Bem]
Length = 217
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ + LE L F KW++KINL + + ED ++H+ DSL + +
Sbjct: 7 DLLKKGAAELGVQLDSAQLESLNLFAEELKKWNRKINLTAITGDEDIALKHLVDSLSLLK 66
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
P +D+GSGGGFP I I +E V ++ KK SF + V+ G
Sbjct: 67 AVRCPGRLLDIGSGGGFPCIPVKIVQPDLEMVSV---DAVVKKISFQKQAVRLLNLTGFT 123
Query: 127 VFACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQK 167
R + Q + D + +RA +D+ + + + P L +
Sbjct: 124 ALHVRAETLAQEYGASFDWVVSRAFSDIPSFVAMALPVLKPE 165
>gi|149279363|ref|ZP_01885494.1| glucose-inhibited division protein B [Pedobacter sp. BAL39]
gi|149229889|gb|EDM35277.1| glucose-inhibited division protein B [Pedobacter sp. BAL39]
Length = 210
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ + LE+ Y L+ W+ +IN++S +++ +IRHV SL + + + +D
Sbjct: 14 DLTAQQLEQFGQLYELYSFWNAQINVISRKDIDELYIRHVLHSLGIAKFCSFKPGETVLD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I + +L++S KK + V R +
Sbjct: 74 VGTGGGFPGIPLAILFPETQ---FHLVDSIGKKIKVVTEVAAGLGLNNVKASHLRAE--- 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q++ D + +RA+ L +PW+ K
Sbjct: 128 QVMEKYDFVVSRAVTRLIDF----YPWVKGK 154
>gi|91795107|ref|YP_564758.1| glucose-inhibited division protein B [Shewanella denitrificans
OS217]
gi|123356335|sp|Q12HP1|RSMG_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91717109|gb|ABE57035.1| methyltransferase GidB [Shewanella denitrificans OS217]
Length = 208
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 4/161 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+S L A + + + +L F + KW+K NL S + E IRHV DSL V
Sbjct: 3 SSQLSAYLAEMNLSATEQQQGQLVGFVEMLNKWNKAYNLTSVRSPEQMLIRHVMDSLTVS 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ID+G+G G PGI +I E L++S K+ F + V +
Sbjct: 63 PYLS-GKRFIDVGTGPGLPGIPLAIMNPDKE---FVLLDSLGKRIRFQKQVQFELKINNI 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA Q D + +RA A + +L + + +
Sbjct: 119 SSVESRVEAFQPEIKFDGVLSRAFASVQDMLTWCHHLPHNE 159
>gi|329121704|ref|ZP_08250321.1| glucose inhibited division protein B [Dialister micraerophilus DSM
19965]
gi|327468174|gb|EGF13660.1| glucose inhibited division protein B [Dialister micraerophilus DSM
19965]
Length = 231
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWID 77
+++ET EKL + ++ ++ INL + E+ I++V DSL V+ + P +D
Sbjct: 11 EINKETYEKLISYNKYVIEKNQHINLTGIKSEEESLIKNVYDSLTVYEEKYFPENGKILD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA- 135
LG+GGGFPG+I +I ++ V L+++ KK ++ +++K + K R ++A
Sbjct: 71 LGTGGGFPGVILAILRPDMQ---VVLMDAVRKKLDAIKEILEKLEIKNAKTLHARAEDAA 127
Query: 136 --PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D+++ARA+ ++T+ E++ P++ ++
Sbjct: 128 RDEKYRDVFDIVTARAVKRMNTVSEWALPFVKKE 161
>gi|225010940|ref|ZP_03701407.1| methyltransferase GidB [Flavobacteria bacterium MS024-3C]
gi|225004987|gb|EEG42942.1| methyltransferase GidB [Flavobacteria bacterium MS024-3C]
Length = 211
Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ A + N + N++ + ++ L+ W+ KIN+VS +E+ ++RHV SL + +
Sbjct: 1 MDAKLIFNYFPNLTHQQQDQFIALEALYQDWNLKINVVSRKDIEELYLRHVLHSLAIAKF 60
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G+GGGFPGI +I + L+++ KK ++ VV
Sbjct: 61 ISFNPGAQVLDVGTGGGFPGIPLAILFPETQ---FTLVDAIGKKIKVVQEVVDGLGIENV 117
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ R++E D + +RA+A + T + +
Sbjct: 118 RAIHQRVEEDNN---QYDFVVSRAVAAMPTFMRW 148
>gi|120600845|ref|YP_965419.1| 16S rRNA methyltransferase GidB [Shewanella sp. W3-18-1]
gi|146295046|ref|YP_001185470.1| 16S rRNA methyltransferase GidB [Shewanella putrefaciens CN-32]
gi|166224613|sp|A4YCI8|RSMG_SHEPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224615|sp|A1RQC0|RSMG_SHESW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120560938|gb|ABM26865.1| methyltransferase GidB [Shewanella sp. W3-18-1]
gi|145566736|gb|ABP77671.1| methyltransferase GidB [Shewanella putrefaciens CN-32]
gi|319428564|gb|ADV56638.1| methyltransferase GidB [Shewanella putrefaciens 200]
Length = 206
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 16 LNTYNVSR--ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L N+S E ++L F + KW+K NL S E +RH+ DSL V + H
Sbjct: 10 LAEINLSATAEQKKQLIDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSLVVSK-HLQGE 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ID+G+G G PGI +I + L++S K+ F + V + R
Sbjct: 69 RFIDVGTGPGLPGIPLAIMNPN---KTFVLLDSLGKRIRFQKQVAFELGIRNISSVESRV 125
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 126 EAYQAEQQFDGVLSRAFASIQDMLSWCHHL 155
>gi|254442849|ref|ZP_05056325.1| methyltransferase GidB [Verrucomicrobiae bacterium DG1235]
gi|198257157|gb|EDY81465.1| methyltransferase GidB [Verrucomicrobiae bacterium DG1235]
Length = 212
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+S E + +L + L +W+ KINL+S S VE+ RH+ SL + ++ + S ID
Sbjct: 14 ELSPEQIAQLAQYAELIAEWNSKINLISRSDVENLPKRHILHSLAIAKVMAFQPDSTVID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+GGGFPGI +I L++S KK ++ +++ V F CR++E
Sbjct: 74 VGTGGGFPGIPLAIAFPETR---FLLVDSIGKKIKVVQDCIERLGLTNAVAFNCRVEEVD 130
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ D I ARA+ L +++
Sbjct: 131 R---QVDFIVARAVTQLPKFMDW 150
>gi|260063673|ref|YP_003196753.1| glucose-inhibited division protein B [Robiginitalea biformata
HTCC2501]
gi|88783118|gb|EAR14291.1| glucose-inhibited division protein B [Robiginitalea biformata
HTCC2501]
Length = 212
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--P 72
N N+S ++ L+ W++KIN+VS +++ ++RHV SL + ++H +
Sbjct: 7 FQNFPNLSDTQKDQFLRIGDLYADWNRKINVVSRKDIDELYLRHVLHSLGIARVHSFLPG 66
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +D+G+GGGFPGI +I ++ L+++ KK + V++ + R
Sbjct: 67 TEVLDVGTGGGFPGIPLAILFPQVQ---FTLVDAIGKKIRVVNDVIEGLGLENA--SARQ 121
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A M + D + +RA+A + T + ++ L
Sbjct: 122 VRAEAMKGSFDFVVSRAVAAMPTFVLWTRDRLRP 155
>gi|197106983|ref|YP_002132360.1| glucose inhibited division protein B [Phenylobacterium zucineum
HLK1]
gi|196480403|gb|ACG79931.1| glucose inhibited division protein B [Phenylobacterium zucineum
HLK1]
Length = 253
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
LE F + +NLV T+ DFW RH DS ++ +L P +W DLG+G GFPG++
Sbjct: 63 LERFLAKLEAGNAVMNLVGPKTLPDFWNRHAWDSAQLLKLAPDARVWADLGAGAGFPGLV 122
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I G V+L+ES K+ FL VV + V R + + D+++AR
Sbjct: 123 LAILGKGRPGFHVHLVESMAKRCRFLTEVVTELGLPATVHNERAE---NLDLAVDIVTAR 179
Query: 149 ALADLDTLLEYSFPWLY 165
A A L LL Y+ P+L
Sbjct: 180 ACAPLGRLLGYARPYLK 196
>gi|332308609|ref|YP_004436460.1| methyltransferase GidB [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175938|gb|AEE25192.1| methyltransferase GidB [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 215
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L VS E + KL F L KW+K NL S E I+H+ DS+ V H S +
Sbjct: 18 LTDLQVSEEQISKLVGFVQLIHKWNKAYNLTSVRDPESMLIKHIMDSIVVAP-HLQQSHY 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQE 134
ID+G+G G PGI +I L L++S K+ F++ V + + R+++
Sbjct: 77 IDVGTGPGLPGIPLAIMLPQTH---FTLLDSLGKRVRFMKQVAYELKLDNILPVQSRVED 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
+ + +RA A L+ +L + +
Sbjct: 134 YASAHEL-NGVLSRAFASLNDMLTWCQHLI 162
>gi|316931726|ref|YP_004106708.1| methyltransferase GidB [Rhodopseudomonas palustris DX-1]
gi|315599440|gb|ADU41975.1| methyltransferase GidB [Rhodopseudomonas palustris DX-1]
Length = 223
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++S +L+ + L +W K NLV+ ST+ W RHV DSL++ L P W
Sbjct: 22 LRLVSISPALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLVPNARRW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPG++ + ++ + GG V L+E KKA+FLR ++ A G V I +
Sbjct: 82 LDFGSGGGFPGVVLACAMADV-GGHVTLVERIAKKAAFLREALRVAGAPGTVMLADIGDN 140
Query: 136 PQMITTC-DVISARALADLDTLLEYSFPWLYQK 167
D I+ARA+A L L+ ++ P + +
Sbjct: 141 VDRFPQALDCITARAVAPLHQLIGFAEPLMTPR 173
>gi|212695075|ref|ZP_03303203.1| hypothetical protein BACDOR_04613 [Bacteroides dorei DSM 17855]
gi|237710519|ref|ZP_04541000.1| glucose-inhibited division protein B [Bacteroides sp. 9_1_42FAA]
gi|237727016|ref|ZP_04557497.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
D4]
gi|265750295|ref|ZP_06086358.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_33FAA]
gi|212662391|gb|EEB22965.1| hypothetical protein BACDOR_04613 [Bacteroides dorei DSM 17855]
gi|229433872|gb|EEO43949.1| ribosomal RNA small subunit methyltransferase G [Bacteroides dorei
5_1_36/D4]
gi|229455241|gb|EEO60962.1| glucose-inhibited division protein B [Bacteroides sp. 9_1_42FAA]
gi|263237191|gb|EEZ22641.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_33FAA]
Length = 208
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N+S + + Y L+ W+ KIN++S + + + HV SL + ++ + + +D
Sbjct: 10 NLSEQQKTQFAALYDLYTDWNSKINVISRKDIANLYEHHVLHSLGIAKVINFTPDTQIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK V + F CR +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVKVATEVANAIGLKNVTFRHCRAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
+ D + +RA+ L L++
Sbjct: 127 R---KFDFVVSRAVMPLGDLIK 145
>gi|295678143|ref|YP_003606667.1| methyltransferase GidB [Burkholderia sp. CCGE1002]
gi|295437986|gb|ADG17156.1| methyltransferase GidB [Burkholderia sp. CCGE1002]
Length = 227
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S+L +S KL + L KW+ NL + ++H+ DS+ +
Sbjct: 15 SLLADGVRELGLELSDAQQRKLLDYVALLAKWNNVYNLTAIRDPRQMLVQHILDSVSIVP 74
Query: 68 LHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
PS +D+GSGGG PGI+ +I L V + +KK +F +
Sbjct: 75 HLAPRGPSSVLDVGSGGGMPGIVLAIVLPDW---TVTTNDIVHKKTAFQSQAKAELGLAN 131
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ ++ DVI +RA A+L + + + ++
Sbjct: 132 LSVVTGRVETLQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|78186097|ref|YP_374140.1| 16S rRNA methyltransferase GidB [Chlorobium luteolum DSM 273]
gi|123583570|sp|Q3B6D4|RSMG_PELLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78165999|gb|ABB23097.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium luteolum DSM 273]
Length = 238
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++ +L + + ++KL Y+ L +W+ KINL+S ++HV SL
Sbjct: 22 SEARQMLESLCASQGIALDPAQIDKLVYYGELLGEWNMKINLISRKEDAPVILKHVFHSL 81
Query: 64 RVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ HP+ +DLG+GGG PGI +I + L+++ KK + + ++
Sbjct: 82 LISLHHPFTEGEKVLDLGTGGGLPGIPLAIAFPKTD---FLLVDATGKKITACQGMITAL 138
Query: 122 AARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E + D + +R +A L L Y+ P L +
Sbjct: 139 GLKNATALHSRVEELKGLA--FDTVLSRQVAPLADLARYARPLLKK 182
>gi|332518948|ref|ZP_08395415.1| methyltransferase GidB [Lacinutrix algicola 5H-3-7-4]
gi|332044796|gb|EGI80989.1| methyltransferase GidB [Lacinutrix algicola 5H-3-7-4]
Length = 209
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N++ + ++K E L+ W+ KIN+VS +++ ++RHV SL + ++ + S +D
Sbjct: 10 NLTEDQIDKFEKLSHLYQDWNLKINVVSRKDIDELYMRHVLHSLAIAKVIEFKDGSDIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I +L++S KK + V Q R++E
Sbjct: 70 VGTGGGFPGIPLAILFPECN---FHLVDSIAKKLKVVNEVAQGLGLENVKTTHTRVEEIK 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
T D I +RA+A + T + +
Sbjct: 127 ---ETYDFIVSRAVAAMPTFVHW 146
>gi|86136758|ref|ZP_01055336.1| glucose-inhibited division protein B [Roseobacter sp. MED193]
gi|85826082|gb|EAQ46279.1| glucose-inhibited division protein B [Roseobacter sp. MED193]
Length = 206
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 4/154 (2%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPS 73
LL NVSRET+E+LE F + LKW+ +INLVS ++++D W RH+ DS++VF +
Sbjct: 6 LLEQLNVSRETIERLEKFEEVLLKWNPRINLVSKNSLQDLWNRHIVDSVQVFTCVEDLGV 65
Query: 74 IWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+D+GSGGGFPGI+ +I + V LIES +K++FLR ++ V RI
Sbjct: 66 SWVDIGSGGGFPGIVVAIMAAEHAPKTKVTLIESDQRKSAFLRTAARECGVPVTVLNQRI 125
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+EA DV+SARA+ADLD LL +S L +
Sbjct: 126 EEAD--PQNADVLSARAVADLDALLYFSERHLAK 157
>gi|323527851|ref|YP_004230004.1| methyltransferase GidB [Burkholderia sp. CCGE1001]
gi|323384853|gb|ADX56944.1| methyltransferase GidB [Burkholderia sp. CCGE1001]
Length = 238
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L +S L KL + L KW+ NL + I+H+ DSL +
Sbjct: 15 QLLAEGVRELGLELSDTQLAKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIVP 74
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P +D+GSGGG PGI+ +I V + + +KK +F +
Sbjct: 75 HLAERNPRSVLDVGSGGGLPGIVLAIVRPDC---AVTVNDIVHKKTAFQAQAKAELGLGN 131
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ ++ DVI +RA A+L + + + ++
Sbjct: 132 LSVVTGRVETLQPGAEVSAKFDVIVSRAFAELADFVTLARHLVAER 177
>gi|307731469|ref|YP_003908693.1| methyltransferase GidB [Burkholderia sp. CCGE1003]
gi|307586004|gb|ADN59402.1| methyltransferase GidB [Burkholderia sp. CCGE1003]
Length = 227
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ KL + L KW+ NL + I+H+ DSL +
Sbjct: 15 PLLADGVAELGLDLDDTQRAKLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVP 74
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P +D+GSGGG PGI+ +I V + + +KK +F +
Sbjct: 75 HLSQRKPGSVLDVGSGGGLPGIVLAIVKPDWR---VTVNDIVHKKTAFQAQAKAELGLSN 131
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ DVI +RA A+L + + + Q
Sbjct: 132 LSVVTGRVETLQAGAEVPAKFDVIVSRAFAELADFVTLARHLVAQ 176
>gi|189462108|ref|ZP_03010893.1| hypothetical protein BACCOP_02788 [Bacteroides coprocola DSM 17136]
gi|189431189|gb|EDV00174.1| hypothetical protein BACCOP_02788 [Bacteroides coprocola DSM 17136]
Length = 208
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + +++ E+ Y L+ W+ KIN++S + + + HV SL + + +
Sbjct: 2 DIILKYFPDLTETQKEQFGALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKFIQF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +DLG+GGGFPGI +I +L++S KK + +
Sbjct: 62 KPGTRIMDLGTGGGFPGIPLAILFPD---STFHLVDSIGKKVRVATEIANAIGLKNVTTR 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLE 158
CR +E QM D + +RA+ L LL+
Sbjct: 119 HCRAEEEKQM---FDFVVSRAVMPLTDLLK 145
>gi|257465889|ref|ZP_05630200.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
gi|315917045|ref|ZP_07913285.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
gi|313690920|gb|EFS27755.1| glucose inhibited division protein B [Fusobacterium gonidiaformans
ATCC 25563]
Length = 234
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 8/165 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L+ ++S + +E L + L L++++ NL + + +H+ DSL +
Sbjct: 1 MKEYLQEGIQKLGISLSEKQIENLLTYVTLLLEYNQHTNLTAIREEKAVIEKHILDSLLL 60
Query: 66 FQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P + ID+G+G GFPG++ +I I L++S KK FL +V + +
Sbjct: 61 QEYIPKDATTAIDIGTGAGFPGMVLAICNPMIH---FTLMDSVGKKTKFLEWVKEDLNLQ 117
Query: 125 G-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+V R ++ Q D+ R ++ L +LEY P+L
Sbjct: 118 NVEVINARAEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFLK 162
>gi|149371606|ref|ZP_01891022.1| glucose-inhibited division protein B [unidentified eubacterium
SCB49]
gi|149355233|gb|EDM43793.1| glucose-inhibited division protein B [unidentified eubacterium
SCB49]
Length = 232
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 1 MKYCDSNSILRANYLLNTY-----NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFW 55
+K N +L+ +++ ++S + L+ W+ KIN+VS +++ +
Sbjct: 9 LKIAKENLLLQHKTIMDLIKNYFPDLSDTQKNQFIKLEELYKDWNLKINVVSRKDIDEIY 68
Query: 56 IRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RHV SL + ++ + S +D+G+GGGFPG+ +I + +L++S KK
Sbjct: 69 LRHVLHSLGIAKVMSFLPGSTVMDVGTGGGFPGVPLAILFPETQ---FHLVDSIGKKIKV 125
Query: 114 LRYVVQKTAARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ VV V R + + D I +RA+A ++T + + + +K
Sbjct: 126 VEEVVAGLGLTNVKVTNDRAE---NIDEQYDFIVSRAVAQMETFVRWVKNSVKKK 177
>gi|313892198|ref|ZP_07825791.1| 16S rRNA methyltransferase GidB [Dialister microaerophilus UPII
345-E]
gi|313119336|gb|EFR42535.1| 16S rRNA methyltransferase GidB [Dialister microaerophilus UPII
345-E]
Length = 231
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWID 77
+++ET EKL + ++ ++ INL + E+ I++V DSL V+ + P +D
Sbjct: 11 EINKETYEKLISYNKYVIEKNQHINLTGIKSEEESLIKNVYDSLTVYEEKYFPENGKILD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA- 135
LG+GGGFPG+I +I ++ V L+++ KK ++ +++K + K R ++A
Sbjct: 71 LGTGGGFPGVILAILRPDMQ---VVLMDAVRKKLDAIKEILEKLEIKNAKTLHARAEDAA 127
Query: 136 --PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
D+++ARA+ ++T+ E++ P++ ++
Sbjct: 128 RDENYRDVFDIVTARAVKRMNTVSEWALPFVKKE 161
>gi|282881764|ref|ZP_06290422.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
gi|281298374|gb|EFA90812.1| 16S rRNA methyltransferase GidB [Peptoniphilus lacrimalis 315-B]
Length = 231
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIW 75
Y ++ E +E E F L+++K N+ ++F ++H DSL +F+ L
Sbjct: 9 KYKLNNENIEDFEKFRKFLLEYNKITNITRIVDEDEFNVKHYLDSLSIFKTGLIRDNMKI 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
+DLG+GGGFPG+ + ++ ++L++S NK+ FL +++ + K R +E
Sbjct: 69 LDLGTGGGFPGVPLKLYKKDLD---ISLVDSLNKRIVFLNKAIEELDLKNIKAIHARAEE 125
Query: 135 A---PQMITTCDVISARALADLDTLLEYSFPWL 164
++++RA+A L TLLEY+ P++
Sbjct: 126 LAFDEDYREKFQLVTSRAVARLRTLLEYALPFV 158
>gi|313665699|ref|YP_004047570.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
gi|312949510|gb|ADR24106.1| 16S rRNA methyltransferase GidB [Mycoplasma leachii PG50]
Length = 232
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIW 75
+ +++E KL +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 12 KNFTINQEIKNKLNLYYQILIEENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+G+G GFPG++ I +I+ + LIES NKK +FL+Y+V++ ++ R +E
Sbjct: 72 ADIGTGPGFPGVVLKIFFPNIK---LTLIESNNKKVNFLKYLVKRLNLNNVEILNKRAEE 128
Query: 135 A-PQMITTCDVISARALADLDTLLEYSFPWLY 165
D++ +RA+A LD +LE +
Sbjct: 129 LTNDYKEQFDIVISRAVAYLDIILELGVQLVK 160
>gi|253987527|ref|YP_003038883.1| 16S rRNA methyltransferase GidB [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253778977|emb|CAQ82137.1| methyltransferase GidB [Photorhabdus asymbiotica]
Length = 213
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +S++ ++L + + KW+K NL S E +RH+ DS+ V
Sbjct: 12 LELLLTKARIKLSQQQKQQLIAYVDMLNKWNKTYNLTSVRDPEQMLVRHIMDSIIVSPYL 71
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ID+G+G G PGI +I L++S K+ FLR V + + +
Sbjct: 72 -QGYRFIDVGTGPGLPGIPLAIVRPDSH---FTLLDSLGKRVRFLRQVQHELSLANIEPV 127
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R++E D + +RA A L ++ +
Sbjct: 128 QSRVEEYLSG-PPFDGVISRAFASLQDMVSWC 158
>gi|226952976|ref|ZP_03823440.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ATCC 27244]
gi|294650558|ref|ZP_06727915.1| glucose-inhibited division protein B [Acinetobacter haemolyticus
ATCC 19194]
gi|226836297|gb|EEH68680.1| glucose-inhibited division protein B (methyltransferase)
[Acinetobacter sp. ATCC 27244]
gi|292823555|gb|EFF82401.1| glucose-inhibited division protein B [Acinetobacter haemolyticus
ATCC 19194]
Length = 211
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ ++S E L L + + W+K NL + ++ ++H+ DSL +
Sbjct: 6 QELKQGSQALGLSLSEEALTLLLKYQDALVLWNKAYNLTAIREPKEMLVKHLLDSLSILN 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+GGG PG+I ++ + L++S KK FL+ + + +
Sbjct: 66 DLP-AGRLLDVGTGGGMPGMIIALCQPERDC---VLLDSNGKKIRFLKQFIADLKLKNVI 121
Query: 128 -FACRI--QEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R+ +++ + DVI++RA A L + + P+++ +
Sbjct: 122 AVQTRVESEDSISELGHFDVITSRAFASLTDFVNAAQPYMHDQ 164
>gi|300814759|ref|ZP_07095007.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511146|gb|EFK38398.1| 16S rRNA methyltransferase GidB [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 231
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+ +Y ++ Y ++ E +E E F L+++K N+ ++F ++H DSL +F+
Sbjct: 1 MTLKDYFID-YKLNNENIEDFEKFRKFLLEYNKITNITRIVDEDEFNVKHYLDSLSIFKT 59
Query: 68 -LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
L +DLG+GGGFPG+ + ++ ++L++S NK+ FL +++ +
Sbjct: 60 GLIRDNMKILDLGTGGGFPGVPLKLYKKDLD---ISLVDSLNKRIVFLNKAIEELDLKNI 116
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
K R +E ++++RA+A L TLLEY+ P++
Sbjct: 117 KAIHARAEELAFDKDYREKFQLVTSRAVARLRTLLEYALPFV 158
>gi|163754285|ref|ZP_02161408.1| glucose-inhibited division protein B [Kordia algicida OT-1]
gi|161326499|gb|EDP97825.1| glucose-inhibited division protein B [Kordia algicida OT-1]
Length = 209
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ E LE+ L+ +W+ +IN++S +++ ++RHV L + ++ P+ S +D
Sbjct: 10 ELTTEQLEQFGQLEALYKEWNAQINVISRKDIDELYLRHVLHGLAIAKVQPFVAGSRILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I ++ L+++ KK ++ V + R ++
Sbjct: 70 VGTGGGFPGIPLAILFPEVQ---FVLVDAIGKKIKVVQAVAESIGLTNVSAHHMRAEKVK 126
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQKK 168
D I +RA+ ++ +++ + +K+
Sbjct: 127 ---GEFDFIVSRAVTNMPDFVKWVRKKVAKKQ 155
>gi|319953777|ref|YP_004165044.1| 16S rRNA m(7)g-527 methyltransferase [Cellulophaga algicola DSM
14237]
gi|319422437|gb|ADV49546.1| 16S rRNA m(7)G-527 methyltransferase [Cellulophaga algicola DSM
14237]
Length = 211
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-- 71
L+ +++ E + L+ W+ KIN+VS +++ ++RHV SL + ++H +
Sbjct: 6 LFLHFPDLTEEQKRQFTLLADLYKDWNMKINVVSRKDIDELYLRHVLHSLAIAKVHQFLP 65
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
S ID+G+GGGFPG+ +I L+++ KK + VV +
Sbjct: 66 GSSVIDVGTGGGFPGVPLAILFPETH---FTLVDAIGKKIKVVDGVVAGLGLKNVTTIND 122
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ D I +RA+A + T + ++ + ++
Sbjct: 123 RVETVK---GKFDFIVSRAVAAMPTFVHWTKGIIKKE 156
>gi|157964061|ref|YP_001504095.1| 16S rRNA methyltransferase GidB [Shewanella pealeana ATCC 700345]
gi|189040717|sp|A8HAH3|RSMG_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157849061|gb|ABV89560.1| methyltransferase GidB [Shewanella pealeana ATCC 700345]
Length = 207
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + ++L F + KW+K NL S E IRH+ DSL V H S +ID
Sbjct: 14 GLTATEQQKKQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDSL-VVSPHLKGSRFID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ F + V + EA Q
Sbjct: 73 VGTGPGLPGIPLAILNPDKE---FVLLDSLGKRIRFQKQVQFELGINNISSIESRVEAYQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + +L +
Sbjct: 130 PKDLFDGVLSRAFASIQDMLHWCHHL 155
>gi|39933370|ref|NP_945646.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris CGA009]
gi|55976427|sp|Q6ND16|RSMG_RHOPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39652995|emb|CAE25737.1| putative glucose inhibited division protein B (GidB)
[Rhodopseudomonas palustris CGA009]
Length = 223
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L + +L+ + L +W K NLV+ ST+ W RHV DSL++ L P+ W
Sbjct: 22 LKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMPHARRW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPG++ + ++ + GG V L+E KKA+FLR ++ A G V I +
Sbjct: 82 LDFGSGGGFPGVVLACAMADV-GGHVTLVERIAKKAAFLREALRVAGAPGTVILADIGDN 140
Query: 136 PQMITTC-DVISARALADLDTLLEYSFPWLYQ 166
D I+ARA+A L L+ ++ P +
Sbjct: 141 VDRFPQALDCITARAVAPLHQLIGFAEPLMTP 172
>gi|307943444|ref|ZP_07658788.1| 16S rRNA methyltransferase GidB [Roseibium sp. TrichSKD4]
gi|307773074|gb|EFO32291.1| 16S rRNA methyltransferase GidB [Roseibium sp. TrichSKD4]
Length = 217
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 57/137 (41%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
RA + +VSRETL++L+ + L LKW K NL++ ST+ D W+RHV DSL+ P
Sbjct: 9 RAQDVHKFGDVSRETLDRLQIYVDLLLKWQKAQNLIAPSTIPDVWVRHVADSLQTHWSLP 68
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+W+D+GSGGGFPG++T+I L+ ++ V++IES KKA+FLR +++T + G V A
Sbjct: 69 GAKVWVDIGSGGGFPGVVTAIMLADVKDAHVHMIESNQKKATFLRTALRETGSNGTVHAG 128
Query: 131 RIQEAPQ--MITTCDVI 145
RI+ + D +
Sbjct: 129 RIESVAKSWKHGPVDAV 145
>gi|167626209|ref|YP_001676503.1| 16S rRNA methyltransferase GidB [Shewanella halifaxensis HAW-EB4]
gi|189040824|sp|B0TQG4|RSMG_SHEHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167356231|gb|ABZ78844.1| methyltransferase GidB [Shewanella halifaxensis HAW-EB4]
Length = 207
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 4/146 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ + ++L F + KW+K NL S E IRH+ DSL V H S +ID
Sbjct: 14 GLTATEQQKKQLVDFVGMLNKWNKAFNLTSVRDPEQMLIRHIMDSL-VVSPHLKGSRFID 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G G PGI +I E L++S K+ F + V + EA Q
Sbjct: 73 VGTGPGLPGIPLAILNPDKE---FVLLDSLGKRIRFQKQVQFELGINNISSIESRVEAYQ 129
Query: 138 MITTCDVISARALADLDTLLEYSFPW 163
D + +RA A + +L +
Sbjct: 130 PEELFDGVLSRAFASIQDMLHWCHHL 155
>gi|302880135|ref|YP_003848699.1| methyltransferase GidB [Gallionella capsiferriformans ES-2]
gi|302582924|gb|ADL56935.1| methyltransferase GidB [Gallionella capsiferriformans ES-2]
Length = 216
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+V +T +KL + L +KW+K NL + + H+ DSL V H W+D
Sbjct: 21 GLSVDSDTEQKLIDYLQLLVKWNKVYNLTAIRDPQQMVSYHLLDSLAVLP-HLQAGRWLD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G G G PG++ +I V L++S +KK F++ + + C E
Sbjct: 80 VGCGAGLPGLVLAICRPDW---SVTLLDSNSKKTGFVQQAIIELGLHNAQVRCARVEDVD 136
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
I +RA +L L + +
Sbjct: 137 ASQKYSGIISRAFTELGDFLRVTRHLMAD 165
>gi|170694310|ref|ZP_02885464.1| methyltransferase GidB [Burkholderia graminis C4D1M]
gi|170140733|gb|EDT08907.1| methyltransferase GidB [Burkholderia graminis C4D1M]
Length = 232
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 9/171 (5%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ + + L ++S L KL + L KW+ NL + I+H+ D
Sbjct: 10 REALAQLLTDGTRELGLLDLSDAQLGKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILD 69
Query: 62 SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + P +D+GSGGG PGI+ +I L V + + +KK +F
Sbjct: 70 SLSIVPHLALRNPRSVLDVGSGGGLPGIVLAIVLPDC---GVTVNDIVHKKTAFQAQAKA 126
Query: 120 KTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V R++ ++ DVI +RA A+L + + + +
Sbjct: 127 ELGLTNLSVVTGRVETLQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAE 177
>gi|91785744|ref|YP_560950.1| glucose inhibited division protein [Burkholderia xenovorans LB400]
gi|123062449|sp|Q13SP1|RSMG_BURXL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91689698|gb|ABE32898.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia xenovorans
LB400]
Length = 227
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L +S L KL + L KW+ NL + I+H+ DSL +
Sbjct: 15 PLLADGVRELGLALSDAQLGKLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVP 74
Query: 68 LH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
PS +D+GSGGG PGI+ +I L V + + +KK +F +
Sbjct: 75 HLAPLGPSSVLDVGSGGGLPGIVLAIVLPEW---TVTVNDIVHKKTAFQAQGKAELGLAN 131
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ ++ DVI +RA A+L + + + ++
Sbjct: 132 LSVVTGRVESLQPGAEVPAKFDVIVSRAFAELADFVTLARHLVAEQ 177
>gi|332881974|ref|ZP_08449615.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332680100|gb|EGJ53056.1| 16S rRNA methyltransferase GidB [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 206
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+S E ++ ++ +W+ KIN++S + DF+ RHV SL + + + + +D
Sbjct: 10 QLSEEQQQQFAQLKPIYEEWNAKINVISRKDMSDFYERHVLHSLAIAKRINFCKGTDILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+GGGFPGI ++ L++S KK ++ VV + R +E
Sbjct: 70 VGTGGGFPGIPLAVLFPECN---FTLVDSIGKKIKVVQEVVNTLELKNVTAMQIRAEE-- 124
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ + D + +RA+ + + PW+ K
Sbjct: 125 -LKGSYDFVVSRAVTQMQDFV----PWVKGK 150
>gi|241667529|ref|ZP_04755107.1| glucose-inhibited division protein B [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876075|ref|ZP_05248785.1| methyltransferase glucose-inhibited cell division protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842096|gb|EET20510.1| methyltransferase glucose-inhibited cell division protein
[Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 204
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+R + + E +E+ + L KW+K N+ + ++D ++H+ DSL V
Sbjct: 4 MKDKIRQALVELDIQATEEQIEQWLEYLKLLEKWNKVYNMTAIKEIDDMLVKHLFDSLAV 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ S +D+G+GGG PG++ +I + L++S KK FL+ V +
Sbjct: 64 AKYIKGSST-VDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLGLDN 119
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ + + D I +RA + +DT E +L +
Sbjct: 120 INPLNIRIE---NLDGSFDNIISRAFSSVDTFYELCKHFLTK 158
>gi|154495104|ref|ZP_02034109.1| hypothetical protein PARMER_04151 [Parabacteroides merdae ATCC
43184]
gi|154085654|gb|EDN84699.1| hypothetical protein PARMER_04151 [Parabacteroides merdae ATCC
43184]
Length = 223
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ ++++ + L+ W+ KIN++S +E+ ++ HV SL + ++ + S +D+
Sbjct: 28 LTDAQKQQIDALFDLYSDWNSKINVISRKDIENLYLHHVLHSLGILKMLKFREGSTIMDI 87
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ 137
G+GGGFPGI +I L ++ +L++S KK + V + + F CR +E Q
Sbjct: 88 GTGGGFPGIPLAILLPEVQ---FHLVDSIGKKIKVGQAVAEAIGLKNVTFRHCRAEEEKQ 144
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ D + +RA+ L L++ + + +++
Sbjct: 145 L---FDFVVSRAVMPLADLVKIARKNIKKEQ 172
>gi|309806385|ref|ZP_07700397.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
gi|308167216|gb|EFO69383.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
03V1-b]
Length = 207
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
KK NL + ++ +++H DSL ++ D+G+G GFP + I I
Sbjct: 5 KKTNLTRITEEDEVYLKHFYDSLTPIIKFREMISNAESLCDVGAGAGFPSVPIKIIYPDI 64
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMITTCDVISARALAD 152
+ + +I+S K+ +FL +V++ + R ++A ++ DV++ARA+A
Sbjct: 65 K---LTIIDSLGKRLTFLDKLVKQLGLDNITLVHSRAEDAGRNIKLRENFDVVTARAVAR 121
Query: 153 LDTLLEYSFPWLY 165
+ L EY P +
Sbjct: 122 MSVLSEYCLPLVK 134
>gi|192288726|ref|YP_001989331.1| 16S rRNA methyltransferase GidB [Rhodopseudomonas palustris TIE-1]
gi|238692577|sp|B3Q8A6|RSMG_RHOPT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|192282475|gb|ACE98855.1| methyltransferase GidB [Rhodopseudomonas palustris TIE-1]
Length = 223
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L + +L+ + L +W K NLV+ ST+ W RHV DSL++ L P+ W
Sbjct: 22 LKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMPHARRW 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D GSGGGFPG++ + ++ + GG V L+E KKA+FLR ++ A G V I +
Sbjct: 82 LDFGSGGGFPGVVLACAMADV-GGHVTLVERIAKKAAFLREALRVAGAPGTVVLADIGDN 140
Query: 136 PQMITTC-DVISARALADLDTLLEYSFPWLYQ 166
D I+ARA+A L L+ ++ P +
Sbjct: 141 VDRFPQALDCITARAVAPLHQLIGFAEPLMTP 172
>gi|257452320|ref|ZP_05617619.1| glucose inhibited division protein B [Fusobacterium sp. 3_1_5R]
gi|317058863|ref|ZP_07923348.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
3_1_5R]
gi|313684539|gb|EFS21374.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
3_1_5R]
Length = 234
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L+ ++S + +E L + L L++++ NL + + +H+ DSL +
Sbjct: 1 MKEYLQEGIQKLGISLSEKQIENLLTYVTLLLEYNQHTNLTAIREEKAVIEKHILDSLLL 60
Query: 66 FQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P + ID+G+G GFPG++ +I ++ L++S KK FL +V + +
Sbjct: 61 QEYIPKDATTAIDIGTGAGFPGMVLAICNPTV---YFTLMDSVGKKTKFLEWVKENLKLQ 117
Query: 125 G-KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+V R ++ Q D+ R ++ L +LEY P+L
Sbjct: 118 NVEVINARAEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFLK 162
>gi|189466163|ref|ZP_03014948.1| hypothetical protein BACINT_02533 [Bacteroides intestinalis DSM
17393]
gi|189434427|gb|EDV03412.1| hypothetical protein BACINT_02533 [Bacteroides intestinalis DSM
17393]
Length = 206
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ ++ Y L+ W+ KIN++S +E+ + HV SL + ++ + + +D
Sbjct: 10 DLTETQKQQFASLYDLYTDWNAKINVISRKDIENLYEHHVLHSLGIAKVTRFVPGTHIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK V + F R +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVK---FHLVDSIGKKVRVATEVANSIGLKNVTFRHARAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L LL+
Sbjct: 127 QL---FDFVVSRAVMPLADLLK 145
>gi|300778447|ref|ZP_07088305.1| 16S rRNA methyltransferase GidB [Chryseobacterium gleum ATCC 35910]
gi|300503957|gb|EFK35097.1| 16S rRNA methyltransferase GidB [Chryseobacterium gleum ATCC 35910]
Length = 211
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ A+ LL + +++ + E+ L+ +W++KIN++S +E + +H+ SL + ++
Sbjct: 1 MSASLLLKYFPDLTEKQKEQFSQLENLYNEWNEKINVISRKDMESLYEKHILHSLGIAKV 60
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +D+G+GGGFPGI +I +E LI+S KK S ++ V
Sbjct: 61 MAFAPGTKVLDIGTGGGFPGIPLAILFPEVE---FTLIDSIGKKISVVQAVADGVGLTNV 117
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEY 159
R + ++ + +RA+ + L +
Sbjct: 118 TAIHGRAE---KLKEKFHFVVSRAVTQMPEFLRW 148
>gi|89052692|ref|YP_508143.1| methyltransferase GidB [Jannaschia sp. CCS1]
gi|122499791|sp|Q28VZ4|RSMG_JANSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|88862241|gb|ABD53118.1| 16S rRNA m(7)G-527 methyltransferase [Jannaschia sp. CCS1]
Length = 211
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/149 (39%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLG 79
VSRET+++LE ++ L +W K INL++ ST++ W+RH+ DS ++F L P+ W+DLG
Sbjct: 14 VSRETMDRLELYHTLLTRWQKTINLIAPSTIDSVWVRHIMDSAQLFDLASKPAHRWLDLG 73
Query: 80 SGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFPG++ + V L+ES +K FLR ++ K+ + RI + P
Sbjct: 74 SGGGFPGLVVAAMAKDVCPNLTVTLVESDIRKCGFLREAARQMDLSVKILSRRIGDVPA- 132
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
T DVISARAL+ L L+ ++ P + K
Sbjct: 133 -QTADVISARALSSLSNLIGHARPHMTPK 160
>gi|269837891|ref|YP_003320119.1| methyltransferase GidB [Sphaerobacter thermophilus DSM 20745]
gi|269787154|gb|ACZ39297.1| methyltransferase GidB [Sphaerobacter thermophilus DSM 20745]
Length = 243
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--------PYP 72
+ L++ + L L W+++INL + + IR DSL + P
Sbjct: 18 LDATALDRFARYRDLLLDWNRRINLTRVTEPTEVEIRLFADSLLLIPYLRRFREANPDNP 77
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF-LRYVVQKTAARGKVFACR 131
D+G+GGGFPG+ I + ++ + LIE+ KK +F + A + R
Sbjct: 78 PRLADVGAGGGFPGLPLKIAMPDLD---LTLIEATGKKVAFLDAAIAALDLAGARAVHGR 134
Query: 132 IQE---APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+E P DV++ARA+A + TLLEY P L
Sbjct: 135 AEELAHLPDYRGRFDVVTARAVARMPTLLEYCLPLLRP 172
>gi|156311337|ref|XP_001617769.1| hypothetical protein NEMVEDRAFT_v1g225810 [Nematostella vectensis]
gi|156195704|gb|EDO25669.1| predicted protein [Nematostella vectensis]
Length = 288
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLGSG 81
E L + L+ +W+ KIN++S ++ + RHV SL + + ID+G+G
Sbjct: 1 EQLAQFGQLKELYAEWNDKINVISRKDIDQLYERHVLHSLSIAAVCHFDDGASIIDVGTG 60
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMIT 140
GGFPGI +I ++E L++S KK + V + R ++
Sbjct: 61 GGFPGIPLAIYFPNVE---FLLVDSIGKKIKVVNEVAAAIGLKNVTAIHGRAEDVKNR-- 115
Query: 141 TCDVISARALADLDTLLEY 159
D +RA+A L L +
Sbjct: 116 QFDYAVSRAVAPLGKLWGW 134
>gi|295697830|ref|YP_003591068.1| methyltransferase GidB [Bacillus tusciae DSM 2912]
gi|295413432|gb|ADG07924.1| methyltransferase GidB [Bacillus tusciae DSM 2912]
Length = 245
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDLGSGGGFPG 86
LE + ++ ++++NL + + E + +H DSL V L P +D+GSG GFPG
Sbjct: 32 LEVYERRLVERNREVNLTAVTDAEGVYWKHFYDSLVVLGLPEVPQAGFLVDVGSGAGFPG 91
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE---APQMITTC 142
++ ++ G V+L+++ K+ FL V + R +V R +E P +
Sbjct: 92 LVLAVARP---GFSVSLLDALRKRVWFLEEVRGELGLTRVRVVHGRAEEYGRRPGWRESF 148
Query: 143 DVISARALADLDTLLEYSFPWLY 165
D+ +ARA+A + L E P++
Sbjct: 149 DMATARAVAQMSVLAELLLPFVR 171
>gi|282896993|ref|ZP_06304995.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
gi|281197645|gb|EFA72539.1| Glucose inhibited division protein [Raphidiopsis brookii D9]
Length = 252
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-------VFQLHP 70
+ + E +L+ Y L + +++INL + ++FW +H+ DSLR
Sbjct: 24 NWQPTIEQGNQLQKLYDLIVVANRQINLTRITQPKEFWEKHLWDSLRGVSPEQHFLPELN 83
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
ID+GSG GFPG+ I + V L+++ KK +F+ ++K
Sbjct: 84 AAGSIIDIGSGAGFPGLPIGIVFPHHQ---VTLLDATRKKVNFINSAIEKLPLSNATTIL 140
Query: 130 CRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E Q D+ RA++ EY+ P + +
Sbjct: 141 GRAEEIGQETLYREKYDLAVIRAVSTASVCAEYTLPLIKK 180
>gi|332978549|gb|EGK15257.1| glucose inhibited division protein B [Psychrobacter sp. 1501(2011)]
Length = 225
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+Y + + +L + +S E KL + L W+K NL + ++ I+H+ D
Sbjct: 13 QYQELDRLLLDSIEQLKLEISAEQRGKLMLYLDKLLFWNKAYNLTAIKQPKEALIKHIID 72
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + H +D+G+G G PG+I +I E V +++S KK F+R + +
Sbjct: 73 CLAILP-HLKSGKLLDIGTGAGLPGVIIAICQPQRE---VTVLDSNQKKIRFIRQFISEL 128
Query: 122 AARGKV-FACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A RI+ P+ DV+++RA A L ++ + P L +
Sbjct: 129 KITNVTPVASRIENFVPEEHDKFDVVTSRAFASLTDFVDAAEPRLAK 175
>gi|296114341|ref|ZP_06832995.1| putative methyltransferase gidB (glucose-inhibited divisio protein
B) [Gluconacetobacter hansenii ATCC 23769]
gi|295979102|gb|EFG85826.1| putative methyltransferase gidB (glucose-inhibited divisio protein
B) [Gluconacetobacter hansenii ATCC 23769]
Length = 214
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 6/148 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET ++L + L ++W+ +INLVS + W RH+ DSL++ L P + +D+G
Sbjct: 15 DVSRETRDRLTAYADLLVRWNARINLVSRPDLAQLWPRHIADSLQLAALIPQGARVVDMG 74
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG++ ++ V LIES +KA+FLR + R +V A RI
Sbjct: 75 SGGGFPGLVIAMAT----DAHVTLIESDQRKAAFLREASRVAGVRTRVIAARI--EAAEA 128
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQK 167
D+++ARALA L LL++ +L ++
Sbjct: 129 GPADIVTARALAPLPQLLQWGVRFLDKE 156
>gi|113972262|ref|YP_736055.1| 16S rRNA methyltransferase GidB [Shewanella sp. MR-4]
gi|122943391|sp|Q0HD69|RSMG_SHESM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113886946|gb|ABI40998.1| methyltransferase GidB [Shewanella sp. MR-4]
Length = 206
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ L A + E ++L F + KW+K NL S E +RH+ DSL V
Sbjct: 3 SAQLEAYLAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSLVVS 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H +ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 63 P-HLQGERFIDVGTGPGLPGIPLAIMNPD---KTFVLLDSLGKRIRFQKQVAFELGIHNI 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 119 SSIESRVEAYQPEQKFDGVLSRAFASIHDMLTWCHHL 155
>gi|251793667|ref|YP_003008397.1| 16S rRNA methyltransferase GidB [Aggregatibacter aphrophilus
NJ8700]
gi|247535064|gb|ACS98310.1| methyltransferase GidB [Aggregatibacter aphrophilus NJ8700]
Length = 210
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 4/156 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L+ +V+ + ++L L KW+K NL S ++ ++H+ DSL V
Sbjct: 10 DKLKTLLKQTALSVTEQQQQQLVKLVSLLNKWNKAYNLTSVRDPQEMLVKHILDSLVVSS 69
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ID+G+G G PG+ +I L++S K+ SF+R+ V +
Sbjct: 70 YL-QGDRFIDVGTGPGLPGLPLAIINPDKH---FVLLDSLGKRISFIRHAVHELGLTNVE 125
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ E Q D + +RA A L + ++
Sbjct: 126 PVLKRVEEYQPDHQFDGVLSRAFASLKDMTDWCSHL 161
>gi|255535483|ref|YP_003095854.1| Ribosomal RNA small subunit methyltransferase G [Flavobacteriaceae
bacterium 3519-10]
gi|255341679|gb|ACU07792.1| Ribosomal RNA small subunit methyltransferase G [Flavobacteriaceae
bacterium 3519-10]
Length = 211
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N+ L Y +S E + E L+ +W++KIN++S ++ + +H+ SL +
Sbjct: 1 MNAELIDKYFP---ELSAEQKNQFEKLDGLYREWNEKINVISRKDMDSLYEKHILHSLGI 57
Query: 66 FQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ + + +D+G+GGGFPGI +I ++ LI+S KK + ++ V +
Sbjct: 58 AKVMQFAPGTQVLDIGTGGGFPGIPLAILFPQVQ---FTLIDSIGKKITVVKEVSEGVGL 114
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ R ++ + I +RA+ + L +
Sbjct: 115 KNITAVHGRAED---LKGKFHFIVSRAVTQMPVFLRW 148
>gi|24376229|ref|NP_720273.1| glucose-inhibited division protein B [Shewanella oneidensis MR-1]
gi|29336672|sp|Q8E8B0|RSMG_SHEON RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24351292|gb|AAN57716.1|AE015908_1 glucose-inhibited division protein B [Shewanella oneidensis MR-1]
Length = 206
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ L A + E ++L F + KW+K NL S E +RH+ DSL V
Sbjct: 3 SAQLEAYLAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEIMLVRHIMDSLVVS 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ H +ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 63 K-HLQGDRFIDVGTGPGLPGIPLAIMNPD---KTFVLLDSLGKRIRFQKQVAFELGIHNV 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 119 SSIESRVEAYQPEQKFDGVLSRAFASIHDMLTWCHHL 155
>gi|50365477|ref|YP_053902.1| glucose-inhibited methyltransferase [Mesoplasma florum L1]
gi|55976393|sp|Q6F0F5|RSMG_MESFL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50364033|gb|AAT76018.1| glucose-inhibited methyltransferase [Mesoplasma florum L1]
Length = 237
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWI 76
+ S E +KL +Y + ++ + K NL + ED + +H DSL + I
Sbjct: 16 GFVPSEEIKDKLNEYYKILVEENLKYNLTRITNEEDVYEKHFLDSLLFTKETKIDNQKII 75
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEA 135
D+G+G GFPGI+ I + + LI+S NKK +FL V++K + + R +E
Sbjct: 76 DIGTGPGFPGIVLKIFFPETD---ITLIDSNNKKINFLNIVIKKLNLKQIEAKHARAEEL 132
Query: 136 PQMI-TTCDVISARALADLDTLLEYSFPWLY 165
++ D+ +RA+A LD +LE + +L
Sbjct: 133 ARIENEKYDIAISRAVAYLDVILELAVRFLK 163
>gi|254884549|ref|ZP_05257259.1| glucose-inhibited division protein B [Bacteroides sp. 4_3_47FAA]
gi|319640759|ref|ZP_07995472.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_1_40A]
gi|254837342|gb|EET17651.1| glucose-inhibited division protein B [Bacteroides sp. 4_3_47FAA]
gi|317387571|gb|EFV68437.1| ribosomal RNA small subunit methyltransferase G [Bacteroides sp.
3_1_40A]
Length = 209
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N+S + + Y L+ W+ KIN++S + + + HV SL + ++ + + +D
Sbjct: 10 NLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINFTPDTQIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK + + F CR +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVKVATEIANAIGLKNVTFRHCRAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
+ D + +RA+ L L++
Sbjct: 127 R---KFDFVVSRAVMPLGDLIK 145
>gi|150005537|ref|YP_001300281.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus ATCC 8482]
gi|294778738|ref|ZP_06744157.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus PC510]
gi|166224575|sp|A6L4P5|RSMG_BACV8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149933961|gb|ABR40659.1| glucose-inhibited division protein [Bacteroides vulgatus ATCC 8482]
gi|294447394|gb|EFG15975.1| 16S rRNA methyltransferase GidB [Bacteroides vulgatus PC510]
Length = 209
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N+S + + Y L+ W+ KIN++S + + + HV SL + ++ + + +D
Sbjct: 10 NLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINFTPDTQIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK + + F CR +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVKVATEIANAIGLKNVTFRHCRAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
+ D + +RA+ L L++
Sbjct: 127 R---KFDFVVSRAVMPLGDLIK 145
>gi|117918460|ref|YP_867652.1| 16S rRNA methyltransferase GidB [Shewanella sp. ANA-3]
gi|166224614|sp|A0KR27|RSMG_SHESA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117610792|gb|ABK46246.1| methyltransferase GidB [Shewanella sp. ANA-3]
Length = 206
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ L A + E ++L F + KW+K NL S E +RH+ DSL V
Sbjct: 3 SAQLEAYLAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSL-VV 61
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H +ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 62 SPHLQGERFIDVGTGPGLPGIPLAIMNPD---KTFVLLDSLGKRIRFQKQVAFELGIHNI 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 119 SSIESRVEAYQPEQKFDGVLSRAFASIHDMLTWCHHL 155
>gi|313674430|ref|YP_004052426.1| 16S rRNA m(7)g-527 methyltransferase [Marivirga tractuosa DSM 4126]
gi|312941128|gb|ADR20318.1| 16S rRNA m(7)G-527 methyltransferase [Marivirga tractuosa DSM 4126]
Length = 207
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDL 78
+S + + + L+ +W++KIN++S +E+ + +H+ +L + + +D+
Sbjct: 13 QLSAQQKAQFQELGNLYAEWNEKINVISRKDIENIYEKHILHALAIAKFQNLSGKKILDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+GGGFPGI +I + L++S KK ++ V + + + R + +
Sbjct: 73 GTGGGFPGIPLAILFPDAQ---FTLVDSIGKKIKVVKAVAESLGLENVEAYHQRAE---K 126
Query: 138 MITTCDVISARALADLDTLLEY 159
D + +RA+ + + L +
Sbjct: 127 TKGKFDFVVSRAVTRMKSFLHW 148
>gi|332292513|ref|YP_004431122.1| methyltransferase GidB [Krokinobacter diaphorus 4H-3-7-5]
gi|332170599|gb|AEE19854.1| methyltransferase GidB [Krokinobacter diaphorus 4H-3-7-5]
Length = 209
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + +++ +E+ L+ W+ KIN+VS +++ ++RHV SL + ++ +
Sbjct: 2 DIILKYFPDLTETQIEQFSKLKDLYHDWNLKINVVSRKDIDEIYLRHVLHSLGIAKIQRF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
S +D+G+GGGFPG+ +I + +L++S KK + VV+
Sbjct: 62 NPGSKILDVGTGGGFPGVPLAILHPEVN---FHLVDSIGKKIKVVNEVVEGLGITNVKTT 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEY 159
R++ D + +RA+A ++T + +
Sbjct: 119 NDRVETVKD---QYDFVVSRAVAQMETFVHW 146
>gi|254496642|ref|ZP_05109505.1| glucose inhibited division protein B [Legionella drancourtii
LLAP12]
gi|254354070|gb|EET12742.1| glucose inhibited division protein B [Legionella drancourtii
LLAP12]
Length = 209
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLE-KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L L + + LE +L + FL KW+ NL + +E +H+ DSL
Sbjct: 4 DAQSKLLLEQGLEQFGLG--ALEPQLSNYLFLLKKWNAAYNLTAVRDLESMISKHLLDSL 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ID+G+G G PGI +I L++S KK FL V ++
Sbjct: 62 AILPWVN-GRHIIDVGTGPGLPGIPLAIAKPEQN---FVLLDSNGKKTRFLNEVKRQLHL 117
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +V R++ D + +RA + L +++++ +
Sbjct: 118 KNLEVVHFRVE-NYHPTQGFDTVVSRAFSSLAQMVQWTEHLIAN 160
>gi|295691566|ref|YP_003595259.1| methyltransferase Gidb [Caulobacter segnis ATCC 21756]
gi|295433469|gb|ADG12641.1| methyltransferase GidB [Caulobacter segnis ATCC 21756]
Length = 221
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L A S + L F L +W++ +NLV T+ +W RH DS ++
Sbjct: 14 EPPVLDAAGYQALTGASDVQIADLARFQELLAEWNEVMNLVGPLTIATYWTRHALDSSQL 73
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P + W DLG+G G PG++ +I L G V+L+ES K+ FL V +
Sbjct: 74 LDLAPEANTWADLGAGAGLPGVVLAILLKGRAGAKVHLVESMAKRCRFLEVVAKDLDLPV 133
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R ++ + +++ARA A + LL ++ P+L
Sbjct: 134 QIHNARAEDLKLKVE---IVTARACAPMTKLLGFAEPYLR 170
>gi|114049511|ref|YP_740061.1| 16S rRNA methyltransferase GidB [Shewanella sp. MR-7]
gi|123130902|sp|Q0HPF1|RSMG_SHESR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113890953|gb|ABI45004.1| methyltransferase GidB [Shewanella sp. MR-7]
Length = 206
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ L A + E ++L F + KW+K NL S E +RH+ DSL V
Sbjct: 3 SAQLEAYLAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSLVVS 62
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H +ID+G+G G PGI +I L++S K+ F + V +
Sbjct: 63 P-HLQGEHFIDVGTGPGLPGIPLAIMNPD---KTFVLLDSLGKRIRFQKQVAFELGIHNI 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA Q D + +RA A + +L +
Sbjct: 119 SSIESRVEAYQPEQKFDGVLSRAFASIHDMLTWCHHL 155
>gi|171060864|ref|YP_001793213.1| 16S rRNA methyltransferase GidB [Leptothrix cholodnii SP-6]
gi|238689093|sp|B1XYL2|RSMG_LEPCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170778309|gb|ACB36448.1| methyltransferase GidB [Leptothrix cholodnii SP-6]
Length = 218
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 11/168 (6%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
L A +S + L + L +W++ NL + + ++H+ DSL
Sbjct: 3 PDRDTLLAGAQALGCPLSDTQADALLAYLGLLQRWNQVYNLTAIRDPKQMLVQHLLDSLA 62
Query: 65 VFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
V P +D+GSGGG PG++ ++ + + +++ KKA+F+R V
Sbjct: 63 VIAPLNRVAGSAPLRLLDVGSGGGLPGVVIAVLRPDCQ---ITCVDTVAKKATFIRQVTA 119
Query: 120 KTAAR-GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R+++ VI+ARA A L L++ + P L
Sbjct: 120 ELRLPQLVARHARVEQLTD--GPYSVITARAFASLADLVKLTRPLLAP 165
>gi|315925602|ref|ZP_07921812.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621143|gb|EFV01114.1| glucose inhibited division protein B [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 244
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 8/150 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++S LEKL F ++ INL + F +H+ DSL L P ID+G
Sbjct: 25 SLSEGQLEKLYRFMESLKAVNEHINLTRITDDNAFVEKHLLDSLAC-PLTPADQRIIDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ---EA 135
+GGGFPGI +I + L+++ KK + + ++ A R + +
Sbjct: 84 TGGGFPGIPLAIAYPQKQ---FVLVDATAKKVKAVEKIAADLGLANIELTAARAEALGKN 140
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
P D +RA+A L E P +
Sbjct: 141 PAYRERFDAACSRAVAAYGILSELCLPLVR 170
>gi|17230674|ref|NP_487222.1| 16S rRNA methyltransferase GidB [Nostoc sp. PCC 7120]
gi|20177889|sp|Q8YSA7|RSMG_ANASP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17132277|dbj|BAB74881.1| glucose inhibited division protein B [Nostoc sp. PCC 7120]
Length = 245
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-------RVFQLHP 70
+ + + + Y L L+ ++++NL + ++FW +H+ DSL ++
Sbjct: 17 NWQPTDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISSLQ 76
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ ID+G+G GFPG+ +I + L++S KK +F+ ++ + A K
Sbjct: 77 LGASVIDIGTGAGFPGVPVAII---ASNSTITLVDSTRKKITFIDTILSELALTNAKTLV 133
Query: 130 CRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E PQ DV RA+ EY+ P L
Sbjct: 134 SRAEEIGQQPQHREQYDVALIRAVGTASPCAEYTLPLLK 172
>gi|292493914|ref|YP_003529353.1| methyltransferase GidB [Nitrosococcus halophilus Nc4]
gi|291582509|gb|ADE16966.1| methyltransferase GidB [Nitrosococcus halophilus Nc4]
Length = 211
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 8/159 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL L+ + + + + L + L KW+++ NL + + +H+ DSL +
Sbjct: 4 DILEKGLLILGFKLEQRQVGGLLAYVRLLEKWNQRYNLTAIRNPAEMISKHLFDSLSIGP 63
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+D+GSG G PGI +I E L++ KK FL +
Sbjct: 64 SL-GEGRILDVGSGAGLPGIPLAIAYPERE---FALLDKSAKKTRFLIQASIELGLSNVS 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLL----EYSFP 162
C EA DV+ RA A L + P
Sbjct: 120 VVCERVEAYHPPDLFDVVVTRAFAKLADFVVQAGHLCKP 158
>gi|167762775|ref|ZP_02434902.1| hypothetical protein BACSTE_01133 [Bacteroides stercoris ATCC
43183]
gi|167699115|gb|EDS15694.1| hypothetical protein BACSTE_01133 [Bacteroides stercoris ATCC
43183]
Length = 206
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E + Y L+ W+ KIN++S +E+ + HV SL + ++ + + +D
Sbjct: 10 DLTEEQKRQFAALYDLYTDWNSKINVISRKDIENLYEHHVLHSLGIAKVIRFKPGTKVMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK + + R +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVRVATEIAGSIGLKNVTTRHARAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L LL+
Sbjct: 127 QL---FDFVVSRAVMPLTDLLK 145
>gi|261880786|ref|ZP_06007213.1| glucose-inhibited division protein B [Prevotella bergensis DSM
17361]
gi|270332564|gb|EFA43350.1| glucose-inhibited division protein B [Prevotella bergensis DSM
17361]
Length = 212
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E+ L+ +W+ KIN++S +++ ++ HV SL + ++ + + +D
Sbjct: 12 DLTPRQKEQFGALDALYHEWNAKINVISRKDIDNLYLHHVLHSLAIAKVVSFRPGTTILD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I LI+S KK V + F R +E
Sbjct: 72 IGTGGGFPGIPLAIMFPECR---FRLIDSIGKKVRVATEVAHAIGLDNTEAFHRRGEEEK 128
Query: 137 QMITTCDVISARALADLDTLLE 158
D + +RA+ + L++
Sbjct: 129 D---KFDFVVSRAVMPMPDLVK 147
>gi|88797177|ref|ZP_01112767.1| methyltransferase GidB [Reinekea sp. MED297]
gi|88780046|gb|EAR11231.1| methyltransferase GidB [Reinekea sp. MED297]
Length = 216
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D S L + + ++ L++L ++ L +KW+K NL S D RH+ DSL
Sbjct: 4 DYKSRLHSGAVKLGVELTDAQLDRLLAYHALLVKWNKAYNLTSVRDAGDMVDRHLVDSLS 63
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+G+G G PG+I ++ + V L++S KK FL V
Sbjct: 64 ILPAL-TAEPLLDVGTGPGLPGMIIALLKPDVP---VFLLDSNGKKTRFLNQVKMSLNVE 119
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E+ Q + I++RA A L ++ +S L
Sbjct: 120 NVTVVHHRLESWQPERQFEQITSRAFATLSDMVSFSRHLLAD 161
>gi|193806486|sp|Q46J33|RSMG_PROMT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 248
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPS 73
+ S + L + + L +W+KKINL +DFW V DSL Q
Sbjct: 20 KWAPSEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSH 79
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACR 131
+ID+GSG GFPGI +I + + + L++S +KK +FL+ V ++ + V R
Sbjct: 80 KYIDIGSGCGFPGIAIAIAMPNSN---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTER 136
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
+EA + + D ARA+A + + EY P+L
Sbjct: 137 AEEAGRNPIFRSNFDYAIARAVASANVVAEYLVPFL 172
>gi|333030417|ref|ZP_08458478.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
coprosuis DSM 18011]
gi|332741014|gb|EGJ71496.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
coprosuis DSM 18011]
Length = 206
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N++ E ++ Y L++ W+ KIN++S +E+ + HV SL + ++ + + +D
Sbjct: 10 NLTEEQKKQFAALYDLYIDWNSKINVISRKDIENLYPHHVLHSLGIARVINFKPGTHVMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I + +L++S KK + V + F R QE
Sbjct: 70 LGTGGGFPGIPLAILFPETK---FHLVDSIRKKVRVAQEVATAIGLKNVTFKHARAQEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q D + +RA+ L L++
Sbjct: 127 QE---FDFVVSRAVMPLQDLVD 145
>gi|72382843|ref|YP_292198.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str.
NATL2A]
gi|72002693|gb|AAZ58495.1| 16S rRNA m(7)G-527 methyltransferase [Prochlorococcus marinus str.
NATL2A]
Length = 235
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPS 73
+ S + L + + L +W+KKINL +DFW V DSL Q
Sbjct: 7 KWAPSEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSH 66
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACR 131
+ID+GSG GFPGI +I + + + L++S +KK +FL+ V ++ + V R
Sbjct: 67 KYIDIGSGCGFPGIAIAIAMPNSN---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTER 123
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
+EA + + D ARA+A + + EY P+L
Sbjct: 124 AEEAGRNPIFRSNFDYAIARAVASANVVAEYLVPFL 159
>gi|119896434|ref|YP_931647.1| 16S rRNA methyltransferase GidB [Azoarcus sp. BH72]
gi|189039480|sp|A1K1Q5|RSMG_AZOSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119668847|emb|CAL92760.1| probable methyltransferase GidB [Azoarcus sp. BH72]
Length = 212
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 5/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++ T +L F L LKW+K NL + ++ H+ DSL V
Sbjct: 11 LADGIAALGLDIPTATQARLIAFGELLLKWNKVYNLTAIRAPQEVITHHLLDSLAVLPYL 70
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ D+GSGGG PGI +I + V +E+ NKKASF + + +
Sbjct: 71 SAVTRLADIGSGGGLPGIPLAIVRPEL---SVISVETVNKKASFQQQAKIELGLGNFQPL 127
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R++ + CD + +RA + L +E S +
Sbjct: 128 NARVENL-KPEQPCDGVISRAFSSLKDFVELSGHLV 162
>gi|291005730|ref|ZP_06563703.1| methyltransferase GidB [Saccharopolyspora erythraea NRRL 2338]
Length = 235
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F L + + L+ ++ W RH+ +S + +L P +D+GSG G PGI
Sbjct: 27 ERFAELLREHGVRRGLIGPRELDRLWERHLLNSAVLAELLPPNCRVVDVGSGAGLPGIPL 86
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
SI +E + L+E ++ ++L+ V+ + +V R +E P + + DV++A
Sbjct: 87 SIARPDLE---LTLLEPMARRVAWLQEVITELGLNAEVMRGRAEEGPVRERLADQDVVTA 143
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+A + L ++ P L +
Sbjct: 144 RAVAPMARLAKWCLPLLRPE 163
>gi|118582019|ref|YP_903269.1| methyltransferase GidB [Pelobacter propionicus DSM 2379]
gi|189045874|sp|A1AV41|RSMG_PELPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118504729|gb|ABL01212.1| 16S rRNA m(7)G-527 methyltransferase [Pelobacter propionicus DSM
2379]
Length = 221
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M L+ + +S E L + F KW+ ++NL + + + ++H+
Sbjct: 1 MSMNRFRETLQRATEEMQFELSGEQLRDFQLFAMELKKWNLRVNLTAITDDGEIAVKHIA 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + + +D+GSG G P I I + +E V ++ KK F R+V +
Sbjct: 61 DSLFLARQLDSTERVLDVGSGAGIPAIPLKIAIPGLETVSV---DAVGKKIHFQRHVARL 117
Query: 121 TAARG-KVFACRIQEAPQ-MITTCDVISARALADLDTLLEYSFPWLYQ 166
+G + RI+ + DVI++RA +DL + + P L +
Sbjct: 118 LRLQGFQALHARIESLHATHGRSFDVITSRAFSDLGLFVRLTAPLLAE 165
>gi|126724524|ref|ZP_01740367.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2150]
gi|126705688|gb|EBA04778.1| glucose-inhibited division protein B [Rhodobacterales bacterium
HTCC2150]
Length = 203
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDL 78
NVSRET++ L F L +KW+ KINLVS ++++ W RH+ DS++VF L +W+D+
Sbjct: 8 NVSRETMDDLSVFADLLIKWNAKINLVSPKSIDELWHRHIADSVQVFDLVKVEKGLWVDM 67
Query: 79 GSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPG I +I + + IES +K+ FLR V+++ +V RI+
Sbjct: 68 GTGGGFPGAICAIVAKHKKPEMKFVFIESDTRKSLFLRTVIRELDLNARVENERIE--KT 125
Query: 138 MITTCDVISARALADLDTLLEYS 160
DV+SARALA LD LL ++
Sbjct: 126 QPQNADVVSARALASLDLLLGFA 148
>gi|298208053|ref|YP_003716232.1| glucose-inhibited division protein [Croceibacter atlanticus
HTCC2559]
gi|83850694|gb|EAP88562.1| glucose-inhibited division protein [Croceibacter atlanticus
HTCC2559]
Length = 209
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ LE+ L+ W++KIN+VS +++ + RHV SL + ++ + + +D
Sbjct: 10 DLTELQLEQFSKIGDLYKDWNQKINVVSRKDIDEIYSRHVLHSLGIAKVMSFKDGAKVMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I ++ +L++S KK + VV+ R++E
Sbjct: 70 VGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKIKVVDEVVEGLGLTNVKTSHSRVEEIN 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
T D I +RA+A ++T +
Sbjct: 127 D---TYDFIVSRAVAHMETFTHW 146
>gi|169832368|ref|YP_001718350.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
gi|169639212|gb|ACA60718.1| methyltransferase GidB [Candidatus Desulforudis audaxviator MP104C]
Length = 240
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 67/162 (41%), Gaps = 9/162 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR + L F + + NL + +T + +H DSL +
Sbjct: 9 LRKGAANWGLELGSRELALFSRFMESLSAGAARHNLTAITTPREIVAKHFLDSLAGLLVI 68
Query: 70 P--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK- 126
+ ID+GSG GFPG+ I ++ + L+ES KKA FL VV + G
Sbjct: 69 DPAAGTRIIDVGSGAGFPGLPLKIVRPELK---LTLLESSRKKADFLEAVVGELGLEGVQ 125
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
V R +EA P T ARA+A + L EY P+L
Sbjct: 126 VTGRRAEEAGRDPAHRGTYHWAVARAVAPVSVLSEYCLPFLR 167
>gi|256820758|ref|YP_003142037.1| methyltransferase GidB [Capnocytophaga ochracea DSM 7271]
gi|256582341|gb|ACU93476.1| methyltransferase GidB [Capnocytophaga ochracea DSM 7271]
Length = 205
Score = 153 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+ L+ KW+ +IN++S ++DF+ RHV SL + + + ++ +D
Sbjct: 10 SLSELQQEQFAELKPLYEKWNAQINVISRKDIDDFYERHVLHSLAIAKRIQFVDGTVLLD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+GGGFPGI +I + + L++S KK ++ VV+ R +E
Sbjct: 70 VGTGGGFPGIPLAIMFPNCQ---FTLVDSIGKKIKVVQEVVKALRLTNVTAMQIRAEELK 126
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
T D + +RA+ + + PW+ K
Sbjct: 127 D---TYDFVVSRAVTQMKDFV----PWVKGK 150
>gi|257463657|ref|ZP_05628048.1| glucose inhibited division protein B [Fusobacterium sp. D12]
gi|317061207|ref|ZP_07925692.1| glucose inhibited division protein B [Fusobacterium sp. D12]
gi|313686883|gb|EFS23718.1| glucose inhibited division protein B [Fusobacterium sp. D12]
Length = 234
Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YP 72
L +N+S + +E L + L L++++ NL + + +H+ DSL + + P
Sbjct: 9 LQKWNISLEEKQIEALLSYVSLLLEYNRHTNLTAIREEKAVLEKHILDSLLLQEFIPKEA 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I ++ L++S KK FL V + +V R
Sbjct: 69 KTAIDIGTGAGFPGMVLAICNPHLQ---FTLMDSVGKKTKFLEVVKEHLQLENVEVVNAR 125
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+ R ++ L +LEY P+L
Sbjct: 126 AEDYIQISKRREYYDLGFCRGVSKLAVILEYMIPFLK 162
>gi|225377576|ref|ZP_03754797.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
gi|225210552|gb|EEG92906.1| hypothetical protein ROSEINA2194_03226 [Roseburia inulinivorans DSM
16841]
Length = 197
Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + + ++ +H DSL + +++ +D+G+G GFPGI I ++
Sbjct: 1 MNLTAITEFDEVIEKHFLDSLSLIKVYDLQKEVSVMDMGTGAGFPGIPLKIAFPNLR--- 57
Query: 101 VNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMITTCDVISARALADLDTL 156
+ L +S NK+ FL+ V++K + R +E + D++ +RA+A+L +L
Sbjct: 58 MTLADSLNKRILFLQEVIEKLGLKDIDALHARAEELGKNKEYREKFDLVVSRAVANLSSL 117
Query: 157 LEYSFPWLY 165
EY P++
Sbjct: 118 EEYCVPFVK 126
>gi|124026579|ref|YP_001015694.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. NATL1A]
gi|189040707|sp|A2C4M0|RSMG_PROM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123961647|gb|ABM76430.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. NATL1A]
Length = 248
Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPS 73
+ S + L + + L +W+KKINL +DFW V DSL Q
Sbjct: 20 KWAPSEKQLAQFIHLQELLKEWNKKINLTRLVDGDDFWTAQVCDSLLPLYEELQHPEVSH 79
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACR 131
+ID+GSG GFPGI +I + + + + L++S +KK +FL+ V ++ + V R
Sbjct: 80 KYIDIGSGCGFPGIAIAIAMPNSD---ITLLDSSSKKTTFLKEVSKEIGLDSRIKVVTER 136
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
+EA + + D ARA+A + + EY P+L
Sbjct: 137 AEEAGRNPIFRSNFDYAIARAVASANVVAEYLVPFL 172
>gi|315223893|ref|ZP_07865740.1| glucose inhibited division protein B [Capnocytophaga ochracea
F0287]
gi|314946145|gb|EFS98147.1| glucose inhibited division protein B [Capnocytophaga ochracea
F0287]
Length = 205
Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S ++ L+ KW+ +IN++S ++DF+ RHV SL + + + ++ +D
Sbjct: 10 SLSELQQQQFAELKPLYEKWNAQINVISRKDIDDFYERHVLHSLAIAKRIQFVDGTVLLD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+GGGFPGI +I + + L++S KK ++ VV+ R +E
Sbjct: 70 VGTGGGFPGIPLAIMFPNCQ---FTLVDSIGKKIKVVQEVVKALRLTNVTAMQIRAEELK 126
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
T D + +RA+ + + PW+ K
Sbjct: 127 D---TYDFVVSRAVTQMKDFV----PWVKGK 150
>gi|332639018|ref|ZP_08417881.1| 16S rRNA methyltransferase GidB [Weissella cibaria KACC 11862]
Length = 239
Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----YPSIWIDLGSGGGFPGIIT 89
+ ++ +NL + + ++ +++H DSL + +P ID+G+G GFP +
Sbjct: 30 ERLVAVNEHMNLTAITERDEVYMKHFYDSLTLAWAYPALQTEELHMIDVGAGAGFPSLPL 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM----ITTCDV 144
I ++ + +I++ NK+ +FLR +V++ G V R +E DV
Sbjct: 90 KIAFPQLQ---ITIIDALNKRINFLRDLVKELGLEGVTVEHARAEEFGNKNAPAREQYDV 146
Query: 145 ISARALADLDTLLEYSFPWLY 165
+ARALA L+ L E + P++
Sbjct: 147 ATARALARLNILGELTLPFVK 167
>gi|86141319|ref|ZP_01059865.1| glucose-inhibited division protein B [Leeuwenhoekiella blandensis
MED217]
gi|85831878|gb|EAQ50333.1| glucose-inhibited division protein B [Leeuwenhoekiella blandensis
MED217]
Length = 209
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S L + E L+ W+ KIN+VS +++ ++RHV SL + ++ + + +D
Sbjct: 10 DLSDTQLNQFEKLNDLYQDWNLKINVVSRKDIDEIYLRHVLHSLGIAKVQKFNRGASILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I + +L++S KK + V + R++
Sbjct: 70 VGTGGGFPGIPLAILFPETQ---FHLVDSIGKKIKVVEEVSAGLGLSNVKITNDRVE--- 123
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ D I +RA+A ++T + +
Sbjct: 124 NIDGQYDFIVSRAVAQMETFVRW 146
>gi|198274749|ref|ZP_03207281.1| hypothetical protein BACPLE_00908 [Bacteroides plebeius DSM 17135]
gi|198272196|gb|EDY96465.1| hypothetical protein BACPLE_00908 [Bacteroides plebeius DSM 17135]
Length = 208
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + N+S ++ Y L+ W+ KIN++S + + + HV SL + ++ +
Sbjct: 2 DIILKYFPNLSEVQQQQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVMQF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +DLG+GGGFPGI +I +L++S KK + +
Sbjct: 62 RPETTVMDLGTGGGFPGIPLAILFPETH---FHLVDSIGKKVKVATEIANAIGLKNVTTR 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLE 158
CR +E Q+ D + +RA+ L LL+
Sbjct: 119 HCRAEEEKQL---FDFVVSRAVMPLTDLLK 145
>gi|297184150|gb|ADI20269.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 216
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ + L+ +W+ KIN++S +E F+ +HV SL + +++ + +D
Sbjct: 13 DLTERQRHQFAALQDLYTEWNAKINVISRKDMESFYEKHVLHSLGIAKVYSFKSGQKVLD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I + +L++S KK + V + + R +E
Sbjct: 73 VGTGGGFPGIPLAILFPETQ---FHLVDSIGKKIKVVLAVAEALDLENVRADHGRAEE-- 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA+ + + PW+ K
Sbjct: 128 -FKGPYDFVVSRAVTQMQRFV----PWIKGK 153
>gi|254250983|ref|ZP_04944301.1| Glucose inhibited division protein [Burkholderia dolosa AUO158]
gi|124893592|gb|EAY67472.1| Glucose inhibited division protein [Burkholderia dolosa AUO158]
Length = 228
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 17 MLVDGAAALDVALTDTQRNQLLDYVALLGKWNAVYNLTAIRDPQQMMIQHILDSLSIVPH 76
Query: 69 H--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+GSGGG PGI+ +I V L + KK++F + +
Sbjct: 77 LRARESARVLDVGSGGGLPGIVLAIVRPDWH---VTLNDIVQKKSAFQTQMRAELKLANL 133
Query: 126 KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL ++ + + +
Sbjct: 134 SVVTGRVESLQPGVDVPEKFDVIVSRAFADLSDFVKLARHLVAR 177
>gi|254472398|ref|ZP_05085798.1| methyltransferase GidB [Pseudovibrio sp. JE062]
gi|211958681|gb|EEA93881.1| methyltransferase GidB [Pseudovibrio sp. JE062]
Length = 206
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRET E+L + L KW NL++ ST+ D W+RHV DS+++ + P WID G
Sbjct: 6 DVSRETFERLSIYVDLVRKWQPAQNLIAPSTMNDIWMRHVADSIQIQRSLPDARSWIDFG 65
Query: 80 SGGGFPGIITSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SG GFPG++T++ L + G+V+++ES +KA+FLR V ++ KV A RI+ +
Sbjct: 66 SGAGFPGLVTAMLLKQEGDDGIVHMVESNQRKAAFLRTVAREAGCNVKVHAGRIEAVTKG 125
Query: 139 IT-TCDVISARALADLDTLLEYSFPWLYQ 166
+ +SARALA L L +S ++ +
Sbjct: 126 WEAPIEGVSARALASLQVLCGFSSQFVQR 154
>gi|304313411|ref|YP_003813009.1| Methyltransferase, glucose inhibited division protein B [gamma
proteobacterium HdN1]
gi|301799144|emb|CBL47387.1| Methyltransferase, glucose inhibited division protein B [gamma
proteobacterium HdN1]
Length = 226
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL F L KW+K NL S E+ +RH+ DSL + P + +D+GSGGG PGI
Sbjct: 43 KLLKFLELLHKWNKAYNLTSVRDPEEMVVRHLLDSLSILPWVKGPKV-LDIGSGGGLPGI 101
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
+I LS + L++S KK FL+ + + ++ R++ Q + D I+
Sbjct: 102 PLAICLSEL---SFTLLDSNGKKTRFLQQAATELSLPNLQIVNARVENF-QPAQSFDQIT 157
Query: 147 ARALADLDTLLEYSFPWL 164
+RA + L ++ + P L
Sbjct: 158 SRAFSALTLFMQLATPKL 175
>gi|207722122|ref|YP_002252560.1| methyltransferase [Ralstonia solanacearum MolK2]
gi|206587296|emb|CAQ17880.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum MolK2]
Length = 225
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 68/171 (39%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A ++ L++L+ + L KW++ NL + D H+ DSL
Sbjct: 9 ADARSELDAGARALGLSLDAAQLDRLQAYQALLGKWNRVYNLTAIRDAGDMLTHHLLDSL 68
Query: 64 RVFQ--------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ P +D+GSGGG PGI +I I V +++ KK +FL
Sbjct: 69 AAVPRIAERVRRVQPEAPRVLDVGSGGGLPGIPLAIACPDI---SVTMVDIVQKKTAFLT 125
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E T VI++RA A+L+ + + L
Sbjct: 126 QCRAELGLGNAQSHWGHVEKLADATGYGVITSRAFAELNDFVRLAGHLLAP 176
>gi|90415384|ref|ZP_01223318.1| Glucose inhibited division protein [marine gamma proteobacterium
HTCC2207]
gi|90332707|gb|EAS47877.1| Glucose inhibited division protein [marine gamma proteobacterium
HTCC2207]
Length = 222
Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 6/161 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL A S E +KL + L + W+K NL + H+ DSL V
Sbjct: 13 PILEAGMQEIGVEYSAEQRDKLLAYLQLLITWNKAYNLTAIRDPGQMIRLHLLDSLAVLP 72
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
ID+G+G G PGI +I + L++S KK FL +
Sbjct: 73 HV-VGKRLIDVGTGAGLPGIPLAIMCPDRD---FTLLDSNGKKTRFLFQARCDLGLNNLR 128
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E Q D + +RA + +++ L +
Sbjct: 129 EINARVEE-HQPQVAYDAVLSRAFTSVAGMVDKCSHLLGPE 168
>gi|83942029|ref|ZP_00954491.1| glucose-inhibited division protein B [Sulfitobacter sp. EE-36]
gi|83847849|gb|EAP85724.1| glucose-inhibited division protein B [Sulfitobacter sp. EE-36]
Length = 202
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETLEKL++F L KW+ KINL+S +V + W RH+ DSL+++ P S W+DLG
Sbjct: 8 DVSRETLEKLQHFSRLVEKWTAKINLISKPSVPEMWERHILDSLQIYSHAPNASHWVDLG 67
Query: 80 SGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFP I+ ++ L+ES +K +FLR +++ V RI+E +
Sbjct: 68 SGGGFPAIVVALMSQQDERATKFTLVESDQRKCAFLRTAIRELELNATVANARIEEIEPL 127
Query: 139 ITTCDVISARALADLDTLLEYS 160
DV+SARAL+DL LL ++
Sbjct: 128 --EADVLSARALSDLTALLGFA 147
>gi|167626953|ref|YP_001677453.1| 16S rRNA methyltransferase GidB [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189039392|sp|B0TW44|RSMG_FRAP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167596954|gb|ABZ86952.1| methyltransferase GidB [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 204
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+R + + E +E+ + L KW+K N+ + ++D ++H+ DSL V
Sbjct: 4 MKDKIRQALVELDIQATEEQIEQWLEYLKLLEKWNKVYNMTAIKKIDDMLVKHLFDSLAV 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ S +D+G+GGG PG++ +I + L++S KK FL+ V +
Sbjct: 64 AKYIKGSST-VDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLGLDN 119
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ + + D I +RA + +DT E +L +
Sbjct: 120 INPLNIRIE---NLNGSFDNIISRAFSSVDTFYELCKHFLTK 158
>gi|330815035|ref|YP_004358740.1| Methyltransferase GidB [Burkholderia gladioli BSR3]
gi|327367428|gb|AEA58784.1| Methyltransferase GidB [Burkholderia gladioli BSR3]
Length = 229
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ +L + + ++KL + L KW+ NL + I+H+ DSL +
Sbjct: 16 HDLLSQGLDSLGIELEQTQVDKLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIV 75
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+GSGGG PGI+ +I + V L + +KK++F +
Sbjct: 76 PHLRELDVKTALDVGSGGGLPGIVLAIVFPHWQ---VTLNDIVHKKSAFQTQAKAELKLA 132
Query: 125 G-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ DVI +RA ADL + + +
Sbjct: 133 NLSVVTGRVESLRPGHEVPGQFDVIVSRAFADLSDFVVLARHLVAP 178
>gi|294668221|ref|ZP_06733328.1| 16S rRNA methyltransferase GidB [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309929|gb|EFE51172.1| 16S rRNA methyltransferase GidB [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 209
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+ NL + + H+ DSL + S +D+GSGGG PGI +I ++
Sbjct: 35 KWNGTYNLTALRDEQTMISHHILDSLTLLPYIEQASTLMDVGSGGGMPGIPAAICRPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISARALADLDTL 156
+ L+++ KK +FLR V + A R++E DV+++RA A+L
Sbjct: 95 ---ITLLDANTKKTTFLRQAVIELGLNNVTVASGRVEEMHDK--KVDVVTSRAFAELKDF 149
Query: 157 LEYSFPWLYQK 167
+ + L ++
Sbjct: 150 ISLTAHLLNEQ 160
>gi|71909713|ref|YP_287300.1| glucose-inhibited division protein B [Dechloromonas aromatica RCB]
gi|123626244|sp|Q478A1|RSMG_DECAR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71849334|gb|AAZ48830.1| 16S rRNA m(7)G-527 methyltransferase [Dechloromonas aromatica RCB]
Length = 205
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L A ++ E +KL F L LKW+K NL + H+ DSL +
Sbjct: 2 TRKALAAGLADLGIDLPDEAQQKLLAFRDLLLKWNKTYNLTALRDPAQAISHHLLDSLAI 61
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+GSGGG PGI +I + V+++++ KK +FL+ V + A R
Sbjct: 62 LPHV-GSGNLLDVGSGGGLPGIPLAIARPEL---SVSMVDTVQKKTTFLQQAVIELALRN 117
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++E M IS+RA A++ + + L
Sbjct: 118 VTVHHARVEE---MQGQYAQISSRAFAEIGLFISLTRHLLAP 156
>gi|311696580|gb|ADP99453.1| glucose-inhibited division protein B [marine bacterium HP15]
Length = 214
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 6/162 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ LR ++ + EKL F L KW++ NL + R + DSL +
Sbjct: 7 HGQLRDGLATMGLSLDEDRQEKLLAFLGLLNKWNRAYNLTAVRDERVMVSRQLLDSLSIL 66
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+D+G+GGG PGI +I L L++S KK FL V + +
Sbjct: 67 PWV-TTDHLLDVGAGGGLPGIPLAIALPEKR---FTLLDSNGKKTRFLNQCVLELGLKNV 122
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+V R ++ IS+RA L+ L+ + L +
Sbjct: 123 EVVHGRAEDC-NPPEPFSQISSRAFTALENLVSWCGDLLANE 163
>gi|222109271|ref|YP_002551535.1| 16S rRNA methyltransferase gidb [Acidovorax ebreus TPSY]
gi|254766889|sp|B9M9W4|RSMG_DIAST RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221728715|gb|ACM31535.1| methyltransferase GidB [Acidovorax ebreus TPSY]
Length = 226
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 18/164 (10%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-- 67
LR ++S + +L F L KW+K NL + ++ H+ DSL
Sbjct: 13 LREGANALGLDLSEAQITQLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVPPL 72
Query: 68 -----------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ +D+GSGGG PG++ +I ++ V+ +++ KKA+F++
Sbjct: 73 RRHVARRGQGGAIHLGARLLDVGSGGGLPGVVFAICCPEVD---VSCVDTVAKKAAFIQQ 129
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ DV+S RA A L +S
Sbjct: 130 AAGTLGLSN--LHGIHARVETLAGPFDVVSCRAFAALADFTAWS 171
>gi|326314884|ref|YP_004232556.1| ribosomal RNA small subunit methyltransferase G [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323371720|gb|ADX43989.1| Ribosomal RNA small subunit methyltransferase G [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 243
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ LRA ++S L +L F L KW++ NL + ++ H+ DSL
Sbjct: 9 SAPLRAGAETLGLDLSETQLAQLLEFLALLQKWNQVYNLTAVRDPQEMLTHHLLDSLAAV 68
Query: 67 QLHP----------------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+D+GSGGG PG++ +I S++ V+ +++ KK
Sbjct: 69 APLQRHLKAVQGLPGSAGEGARLRLLDVGSGGGLPGVVFAICCPSLD---VSCVDTVAKK 125
Query: 111 ASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A+F++ R + R++ + DV+S RA A L + +S
Sbjct: 126 AAFIQQAAVSLRLRNLRGIHARVE---TLAGPFDVVSCRAFASLPDFVAWS 173
>gi|320451554|ref|YP_004203650.1| 16S rRNA methyltransferase GidB [Thermus scotoductus SA-01]
gi|320151723|gb|ADW23101.1| 16S rRNA methyltransferase GidB [Thermus scotoductus SA-01]
Length = 246
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--F 66
+L ++ L Y L ++ +++ NL + T E+ ++H DSL +
Sbjct: 14 LLLEGGKALGLDL-EAHLSTFSRLYDLLMEANRRTNLTALRTEEEVVVKHFLDSLTLLTL 72
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P +DLG+G GFPG+ I +E V L+++ KK +F+ V+ +G
Sbjct: 73 PLFQGPWRVLDLGTGAGFPGLPLKIVRPELE---VTLLDATKKKVAFVAQAVEALGLKGA 129
Query: 127 -VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E P+ + ARA+A L L+E P++
Sbjct: 130 YPLWGRAEELAHMPEHREAYHRVVARAVASLCVLVELGLPFVA 172
>gi|294674332|ref|YP_003574948.1| methyltransferase GidB [Prevotella ruminicola 23]
gi|294471908|gb|ADE81297.1| methyltransferase GidB [Prevotella ruminicola 23]
Length = 208
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+S E ++ + L+ W+ KIN++S ++ + HV SL + ++ + + +D
Sbjct: 12 ELSDEQRQQFDALDALYRDWNTKINVISRKDIDQLYEHHVLHSLAIAKMINFRPGTRILD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
G+GGGFPG+ SI + LI+ KK + V + + R ++
Sbjct: 72 FGTGGGFPGVPLSILFPECQ---FKLIDGTGKKIRVAQEVCNAIGLKNCQPTHLRGEDEK 128
Query: 137 QMITTCDVISARALADLDTLLEY 159
D I +RA+ L L++
Sbjct: 129 D---KYDFIVSRAVMPLPDLVKL 148
>gi|121592463|ref|YP_984359.1| 16S rRNA methyltransferase GidB [Acidovorax sp. JS42]
gi|189039375|sp|A1W208|RSMG_ACISJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120604543|gb|ABM40283.1| 16S rRNA m(7)G-527 methyltransferase [Acidovorax sp. JS42]
Length = 226
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 18/164 (10%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR ++S + +L F L KW+K NL + ++ H+ DSL
Sbjct: 13 LREGANALGLDLSEAQITQLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVPPL 72
Query: 70 PY-------------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ +D+GSGGG PG++ +I ++ V+ +++ KKA+F++
Sbjct: 73 RRHVAQRGQDSAARPGARLLDVGSGGGLPGVVFAICCPEVD---VSCVDTVAKKAAFIQQ 129
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ DV+S RA A L +S
Sbjct: 130 AAGTLGLSN--LHGIHARVETLAGPFDVVSCRAFAALADFTAWS 171
>gi|303235753|ref|ZP_07322360.1| 16S rRNA methyltransferase GidB [Prevotella disiens FB035-09AN]
gi|302484200|gb|EFL47188.1| 16S rRNA methyltransferase GidB [Prevotella disiens FB035-09AN]
Length = 208
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ + E+ Y L++ W+ KIN++S +E+ + HV SL + + + + +D
Sbjct: 11 ELTNKQQEQFAALYDLYVDWNSKINVISRKDIENLYEHHVLHSLAIAKFINFQDDTNVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPGI +I + LI+ KK V + + E +
Sbjct: 71 FGTGGGFPGIPLAIMFPNAN---FKLIDGTGKKIKVANEVANAIGLENVLPQHKRGE--E 125
Query: 138 MITTCDVISARALADLDTLLE 158
D I +RA+ L L+
Sbjct: 126 EKGKFDFIVSRAVMPLPDLMR 146
>gi|329577027|gb|EGG58502.1| 16S rRNA methyltransferase GidB [Enterococcus faecalis TX1467]
Length = 200
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + + ++ +++H DS+ + + D+G+G GFP I I S+
Sbjct: 1 MNLTAITEEKEVYLKHFYDSVSLAFFEDFASDKAICDVGAGAGFPSIPLKIVFPSLN--- 57
Query: 101 VNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQMITTCDVISARALADLDTL 156
V +++S NK+ +FL +V + ++ R + + + D ++ARA+A L+ L
Sbjct: 58 VTIVDSLNKRITFLTELVNQLGLANVSLYHDRAETLAKQAEFRGAFDYVTARAVARLNVL 117
Query: 157 LEYSFPWLYQK 167
E P + ++
Sbjct: 118 SELCLPLVKKE 128
>gi|323135830|ref|ZP_08070913.1| methyltransferase GidB [Methylocystis sp. ATCC 49242]
gi|322398921|gb|EFY01440.1| methyltransferase GidB [Methylocystis sp. ATCC 49242]
Length = 217
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/137 (40%), Positives = 84/137 (61%), Gaps = 2/137 (1%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
LE + L +W KINLV+ +T+ + W+RH DS + + P +W+D+GSG GFPG++
Sbjct: 24 LEIYEELLRRWQGKINLVAPNTLNEIWMRHFADSAQAVEAAPEARVWLDIGSGAGFPGLV 83
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ-EAPQMITTCDVISA 147
T++ L V+LIES +KA+F+R V ++T A ++ RI+ E P++ D +SA
Sbjct: 84 TALLLKDRREAKVHLIESDQRKAAFMRAVSRETGAPAEIHVGRIEAELPRLSGRIDAVSA 143
Query: 148 RALADLDTLLEYSF-PW 163
RALA LD LL + P
Sbjct: 144 RALAPLDRLLALAAGPL 160
>gi|311745733|ref|ZP_07719518.1| 16S rRNA methyltransferase GidB [Algoriphagus sp. PR1]
gi|126575176|gb|EAZ79526.1| 16S rRNA methyltransferase GidB [Algoriphagus sp. PR1]
Length = 214
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N++ + + K + L+ W+ KIN++S ++ F+I HV SL + ++ + + +D
Sbjct: 14 NLTEDQIAKFDRLQELYEDWNSKINVISRKDMDQFYIHHVLHSLGISKVMNFQPGTKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+GGGFPGI +I +L++S KK + ++ V ++ + R +
Sbjct: 74 IGTGGGFPGIPLAILFPDTH---FHLVDSIGKKITVVKDVAKQLKLANVEAQQTRAE--- 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q++ D + +RA+ + +PW+ K
Sbjct: 128 QLVRKYDFVISRAVTRMANF----YPWVKNK 154
>gi|221214300|ref|ZP_03587272.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD1]
gi|221165955|gb|EED98429.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD1]
Length = 212
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 13 LSDTQRNRLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP- 136
GSGGG PGI+ +I + V L + KK++F + V R++
Sbjct: 73 GSGGGLPGIVLAIVEPDWQ---VTLNDIVQKKSAFQTQTRAELKLTNLSVVTGRVESLRP 129
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ D+I +RA ADL ++ + +
Sbjct: 130 GVEVPEKFDIIVSRAFADLSDFVKLARHLVAP 161
>gi|329955196|ref|ZP_08296153.1| 16S rRNA methyltransferase GidB [Bacteroides clarus YIT 12056]
gi|328526195|gb|EGF53214.1| 16S rRNA methyltransferase GidB [Bacteroides clarus YIT 12056]
Length = 206
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E + Y L+ W+ KIN++S + + + HV SL + ++ + + +D
Sbjct: 10 DLTEEQKGQFAALYNLYTDWNSKINVISRKDIGNLYEHHVLHSLGIAKVIRFAPGTKIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
LG+GGGFPGI +I ++ +L++S KK V + R +E
Sbjct: 70 LGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKVRVATEVAGSIGLKNVTTRHARAEEEK 126
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L LL+
Sbjct: 127 QL---FDFVVSRAVMPLTDLLK 145
>gi|226941924|ref|YP_002796998.1| 16S rRNA methyltransferase GidB [Laribacter hongkongensis HLHK9]
gi|254766894|sp|C1D5H2|RSMG_LARHH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226716851|gb|ACO75989.1| GidB [Laribacter hongkongensis HLHK9]
Length = 207
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+A +S L ++ L KW++ NL + HV DSL L
Sbjct: 7 LKAGLAELGLALSAPQELLLVHYVELLDKWNRVYNLTAVRETGRMLSYHVLDSLAALPLV 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSGGG PGI +I + L+++ +KK +FL+ V +
Sbjct: 67 -AGQRILDVGSGGGMPGIPFAISQPDWS---LTLLDANHKKTTFLKQAVIELGLTNTEVV 122
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
C EA Q DVI++RA +DL + + L +
Sbjct: 123 CERVEAFQPERKFDVITSRAFSDLAEFVRLTRHLLAE 159
>gi|291547595|emb|CBL20703.1| 16S rRNA m(7)G-527 methyltransferase [Ruminococcus sp. SR1/5]
Length = 200
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + ++ ++H DSL + +D+G+G GFPG+ I +E
Sbjct: 1 MNLTGITEFDEVLVKHFLDSLCCVKAVDMGKIKTVMDIGTGAGFPGVPLKIAFPEVEA-- 58
Query: 101 VNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITTCDVISARALADLDTL 156
L++S NK+ FL G R +E + D+ +RA++ L TL
Sbjct: 59 -CLLDSLNKRVKFLEETFALLGLEGISAIHGRAEEYAKNKAYREKYDLCVSRAVSGLATL 117
Query: 157 LEYSFPWLY 165
EY P++
Sbjct: 118 SEYCLPYVK 126
>gi|85706895|ref|ZP_01037985.1| glucose-inhibited division protein B [Roseovarius sp. 217]
gi|85668506|gb|EAQ23377.1| glucose-inhibited division protein B [Roseovarius sp. 217]
Length = 201
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 64/150 (42%), Positives = 95/150 (63%), Gaps = 4/150 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRET E+L+ + L +KW+ +INLVS ++++ W RH DS +++ L P+P W+DL
Sbjct: 6 DVSRETQERLKVYADLLVKWNPRINLVSKASLDQMWTRHFADSAQIYDLAPHPVEHWVDL 65
Query: 79 GSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ ++ + LIES +KA+FLR V+++T A V RI+ A
Sbjct: 66 GSGGGFPGLVVAVLAQETGSPDRMTLIESDARKAAFLRVVIRETGAAATVLNERIETAEP 125
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
T V+SARALADLD LL ++ L +
Sbjct: 126 QAAT--VLSARALADLDGLLAFAERHLTAE 153
>gi|255080220|ref|XP_002503690.1| predicted protein [Micromonas sp. RCC299]
gi|226518957|gb|ACO64948.1| predicted protein [Micromonas sp. RCC299]
Length = 320
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 22/171 (12%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-- 70
+ +L++Y + ++++ F L+ +K +NL + TV++ RHV DSL +
Sbjct: 78 DAILDSY-LDDAQMDQVRTFATTLLEKNKVMNLTGALTVDEVLGRHVADSLALIPAIERA 136
Query: 71 -----------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+D+GSG GFPG+ +I + E V L+++ K+ SFL
Sbjct: 137 LDAGASSRNPGAKIRVMDVGSGAGFPGMALAIARPTWE---VTLLDTLQKRTSFLADAAA 193
Query: 120 KTAARG-KVFACRIQEAP----QMITTCDVISARALADLDTLLEYSFPWLY 165
+ A + R ++A + DV++ARA+A+L L E P +
Sbjct: 194 ECGADNVRTLWSRAEDAGKVGNEHREAYDVVTARAVAELRVLAELCVPLVR 244
>gi|120434758|ref|YP_860445.1| 16S rRNA methyltransferase GidB [Gramella forsetii KT0803]
gi|189039397|sp|A0LYD2|RSMG_GRAFK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117576908|emb|CAL65377.1| glucose inhibited division protein B [Gramella forsetii KT0803]
Length = 211
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ + + K E L+ W+ KIN+VS +++ ++RH+ SL + ++ + S +D+
Sbjct: 13 LTDDQISKFEKLEELYKDWNLKINVVSRKDIDELYLRHILHSLGIVKVQSFNPGSKILDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQ 137
G+GGGFPGI +I +L++S KK + V + F R++E
Sbjct: 73 GTGGGFPGIPLAIMHPE---SAFHLVDSIGKKIKVVDEVSEGLGLENVTSFNQRVEE--- 126
Query: 138 MITTCDVISARALADLDTLLEY 159
+ D I +RA+A + T + +
Sbjct: 127 LNGNYDFIVSRAVAVMPTFVRW 148
>gi|144899660|emb|CAM76524.1| Methyltransferase [Magnetospirillum gryphiswaldense MSR-1]
Length = 222
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-S 73
+L +S + + +L + L +KW K+INLV T+ W RH DS ++F L P
Sbjct: 27 VLAPLTLSADAVTRLGLYAELLVKWQKRINLVGPDTIPSLWSRHFLDSAQLFPLLPQNIH 86
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSG GFPG++ +I + V+L+ES +K +FLR V + T + RI+
Sbjct: 87 RVMDMGSGAGFPGLVLAILGA----PDVHLVESDARKCAFLREVARITETAVTIHNARIE 142
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ P + D+I+ARALA L+ LL ++ L
Sbjct: 143 KVPPL--GADLITARALAPLEKLLTWAEQHL 171
>gi|224024052|ref|ZP_03642418.1| hypothetical protein BACCOPRO_00769 [Bacteroides coprophilus DSM
18228]
gi|224017274|gb|EEF75286.1| hypothetical protein BACCOPRO_00769 [Bacteroides coprophilus DSM
18228]
Length = 209
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + N++ + Y L+ W+ KIN++S + + + HV SL + ++ +
Sbjct: 2 DIILKYFPNLTDTQKAQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +DLG+GGGFPGI +I +L++S KK + +
Sbjct: 62 KPGTEVMDLGTGGGFPGIPLAILFPDTH---FHLVDSIGKKVRVATEIAAAVGLKNVTTR 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLE 158
CR +E Q D + +RA+ L LL+
Sbjct: 119 HCRAEEEKQ---RFDFVVSRAVMPLTDLLK 145
>gi|52426408|ref|YP_089545.1| glucose-inhibited division protein B [Mannheimia succiniciproducens
MBEL55E]
gi|81609342|sp|Q65Q00|RSMG_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52308460|gb|AAU38960.1| GidB protein [Mannheimia succiniciproducens MBEL55E]
Length = 213
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S + KL L KW+K NL S + I+H+ DS+ V ++ID
Sbjct: 21 ALSISDQQKNKLVQLVLLLNKWNKAYNLTSVRDPMEMLIKHILDSVVVSPYL-QGDLFID 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+G G PG+ +I L++S K+ SF+R V++ V R++E
Sbjct: 80 VGTGPGLPGLPLAIINPDKN---FVLLDSLGKRISFIRNAVRELELSNVVPVLSRVEEYI 136
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
D I +RA A L + ++ +K
Sbjct: 137 -PDHKFDGILSRAFAILKDMTDWCHHLPNEK 166
>gi|221202190|ref|ZP_03575225.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2M]
gi|221208749|ref|ZP_03581748.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2]
gi|221171381|gb|EEE03829.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2]
gi|221177984|gb|EEE10396.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans CGD2M]
Length = 212
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 13 LSDTQRNRLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARALDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP- 136
GSGGG PGI+ +I + V L + KK++F + V R++
Sbjct: 73 GSGGGLPGIVLAIVEPDWQ---VTLNDIVQKKSAFQTQTRAELKLTNLSVVTGRVESLRP 129
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ D+I +RA ADL ++ + +
Sbjct: 130 GVEVPEKFDIIVSRAFADLSDFVKLARHLVAP 161
>gi|154496100|ref|ZP_02034796.1| hypothetical protein BACCAP_00384 [Bacteroides capillosus ATCC
29799]
gi|150274655|gb|EDN01719.1| hypothetical protein BACCAP_00384 [Bacteroides capillosus ATCC
29799]
Length = 238
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 10/145 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PYPSIWIDLGSGGGFP 85
L + L L+ ++ +NL + + + H DS + L ID+G+G GFP
Sbjct: 25 LARYGQLLLEKNQVMNLTAITDPDKVADLHFLDSAALLTLEGVDFKGKRVIDVGTGAGFP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE---APQMITT 141
G+ I SI + L++S K+ ++L V R +E +
Sbjct: 85 GLPLKILEPSI---SLTLLDSLGKRVNWLSEVCADLGLTDVSCVHARAEEQALEKGWRDS 141
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D +RA+ADL L E P++
Sbjct: 142 FDFAVSRAVADLRVLTELCLPYVKP 166
>gi|134294226|ref|YP_001117961.1| 16S rRNA methyltransferase GidB [Burkholderia vietnamiensis G4]
gi|189039489|sp|A4JA23|RSMG_BURVG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134137383|gb|ABO53126.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia vietnamiensis
G4]
Length = 228
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + I+H+ DSL +
Sbjct: 16 QMLIDGTAALDIVLTDAQRNQLLDYVALLGKWNAVYNLTAIRDPRQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRGRTDARVLDVGSGGGLPGIVLAIVQPGWQ---VTLNDIVQKKSAFQTQMRAELKLTN 132
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGGEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|74318825|ref|YP_316565.1| 16S rRNA methyltransferase GidB [Thiobacillus denitrificans ATCC
25259]
gi|123772845|sp|Q3SF56|RSMG_THIDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|74058320|gb|AAZ98760.1| glucose inhibited division protein [Thiobacillus denitrificans ATCC
25259]
Length = 208
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ +KL + L KW++ NL + H+ DSL +D+GSGGG
Sbjct: 21 DATQKLLAYLALLDKWNRVYNLTAVRDAGRMVSHHLLDSLAAVPHF-RGETVLDVGSGGG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PGI +I ++ V LI+S KK +FL + V R+++ +
Sbjct: 80 LPGIPLAIARPDLQ---VTLIDSVAKKTAFLLQAKAELGLANLSVVTGRVED-YRPAARF 135
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV+++RA +DL + + +
Sbjct: 136 DVVTSRAFSDLREFVTLTRHLVK 158
>gi|329900650|ref|ZP_08272542.1| Ribosomal RNA small subunit methyltransferase G [Oxalobacteraceae
bacterium IMCC9480]
gi|327549426|gb|EGF33990.1| Ribosomal RNA small subunit methyltransferase G [Oxalobacteraceae
bacterium IMCC9480]
Length = 221
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+LR + TLE+L + L KW+ NL + + +H+ D+L +
Sbjct: 12 QLLRDGATSLDLFLEPATLERLIDYVALLAKWNTVYNLTAIRDPQQMVTQHLLDTLAILP 71
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G+GGG PG++ +I L ++++++ +KK +FL V +
Sbjct: 72 AFLHVKHVLDVGAGGGLPGMVLAIWAQQANPALRISMVDTVHKKTAFLTQVKVELGLTNV 131
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
EA ++ DVI++RA A+L + +S L +
Sbjct: 132 TVHTGRVEALKVTQLFDVITSRAFAELLDFVNWSGHLLAE 171
>gi|238025742|ref|YP_002909973.1| 16S rRNA methyltransferase GidB [Burkholderia glumae BGR1]
gi|237874936|gb|ACR27269.1| Methyltransferase GidB [Burkholderia glumae BGR1]
Length = 213
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L + + KL + L KW+ NL S I+H+ DSL +
Sbjct: 1 MLADGLDSLGLTLDETQVAKLLDYVALLGKWNAVYNLTSIRDPRQMLIQHILDSLSIVPH 60
Query: 69 ---HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + +KK++F +
Sbjct: 61 LRSLDAATRALDVGSGGGLPGIVLAIVFPGWQ---VTLNDIVHKKSAFQTQAKAELKLAN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGHEVPGQFDVIVSRAFADLADFVSLARHLVAP 162
>gi|255531336|ref|YP_003091708.1| methyltransferase GidB [Pedobacter heparinus DSM 2366]
gi|255344320|gb|ACU03646.1| methyltransferase GidB [Pedobacter heparinus DSM 2366]
Length = 210
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ + + + + Y L+ W+ +IN++S +++ + RH+ SL + + + +D
Sbjct: 14 DLTEKQIAQFDQLYSLYSFWNAQINVISRKDIDELYERHILHSLGIAKFCTFKPGEKVLD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I +L++S KK + V R +
Sbjct: 74 VGTGGGFPGIPLAILFPET---YFHLVDSIGKKIKVVTEVASALGLENVKASHLRAE--- 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q+ D I +RA+ L +PW+ K
Sbjct: 128 QVTDKFDFIVSRAVTRLIDF----YPWIKGK 154
>gi|83953078|ref|ZP_00961800.1| glucose-inhibited division protein B [Sulfitobacter sp. NAS-14.1]
gi|83842046|gb|EAP81214.1| glucose-inhibited division protein B [Sulfitobacter sp. NAS-14.1]
Length = 202
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 58/142 (40%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+VSRETLEKL++F L KW+ KINL+S +V + W RH+ DSL+++ P W+DLG
Sbjct: 8 DVSRETLEKLQHFSQLVEKWTAKINLISKPSVPEMWERHILDSLQIYSHAPNAGHWVDLG 67
Query: 80 SGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
SGGGFP I+ ++ L+ES +K +FLR +++ V RI+ +
Sbjct: 68 SGGGFPAIVVALMSQQDERATKFTLVESDQRKCAFLRTAIRELELNATVANARIEAIEPL 127
Query: 139 ITTCDVISARALADLDTLLEYS 160
DV+SARAL+DL LL ++
Sbjct: 128 --EADVLSARALSDLTALLGFA 147
>gi|109900603|ref|YP_663858.1| methyltransferase GidB [Pseudoalteromonas atlantica T6c]
gi|123063992|sp|Q15MT4|RSMG_PSEA6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109702884|gb|ABG42804.1| 16S rRNA m(7)G-527 methyltransferase [Pseudoalteromonas atlantica
T6c]
Length = 212
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L + V+++ + +L F + KW+K NL S VE ++H+ DS+ V Q
Sbjct: 10 GLLSTHIKRTDLQVTKDQISQLVGFVQMIDKWNKTYNLTSVRDVESMLLKHIMDSIVVAQ 69
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
S +ID+G+G G PGI +I L L++S K+ F++ V + +
Sbjct: 70 HLSQ-SHYIDVGTGPGLPGIPLAIMLPETH---FTLLDSLGKRVRFMKQVAYELKLDNIQ 125
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R+++ + + +RA A L+ +L + +
Sbjct: 126 PVQSRVEDYVSP-HQLNGVLSRAFASLNDMLNWCQHLI 162
>gi|118586485|ref|ZP_01543929.1| glucose-inhibited division protein GidB [Oenococcus oeni ATCC
BAA-1163]
gi|118433049|gb|EAV39771.1| glucose-inhibited division protein GidB [Oenococcus oeni ATCC
BAA-1163]
Length = 242
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PS 73
+ +S + + + L++SKK+NL + +D W++H DSL P +
Sbjct: 13 QSLPISNRKMVLFQTYLEFLLEYSKKVNLTAIKEPKDIWLKHFYDSLTPLLYLPDMNKKA 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+GSG GFPG+ I + + L++S K+ +FL ++ K + + R
Sbjct: 73 SLIDIGSGAGFPGVPLKIVN---QKFQLTLLDSLQKRIAFLDQLIDKLNLKNVETVHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ D ARA+++ +TLLE P++
Sbjct: 130 EDFAHNLNYREKYDFAIARAVSNTNTLLELLLPFVK 165
>gi|83591333|ref|YP_431342.1| methyltransferase GidB [Moorella thermoacetica ATCC 39073]
gi|123523727|sp|Q2RFJ0|RSMG_MOOTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83574247|gb|ABC20799.1| 16S rRNA m(7)G-527 methyltransferase [Moorella thermoacetica ATCC
39073]
Length = 240
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D + +L A + E + +E + L L +++++NL + + E+ W +HV DSL
Sbjct: 3 DRDRLLAAFSKDTGITLKPEQIAMIEAYTGLLLDYNQRVNLTAITDREEIWRKHVLDSLL 62
Query: 65 VFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+F P + ID+G+G G PG+I I +E + L+ES+NKK +FL+ V
Sbjct: 63 LFLALEIPPAAKVIDIGTGAGIPGLILKIYRPDLE---MALLESQNKKVAFLKKAVATLG 119
Query: 123 ARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+G + R ++ + D+ +R LA ++TL EY P++
Sbjct: 120 LQGIECLWGRAEDIGRQKNYRESFDLAVSRGLAGMNTLAEYCLPFVR 166
>gi|329965433|ref|ZP_08302357.1| 16S rRNA methyltransferase GidB [Bacteroides fluxus YIT 12057]
gi|328522225|gb|EGF49339.1| 16S rRNA methyltransferase GidB [Bacteroides fluxus YIT 12057]
Length = 206
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E + Y L+ W+ KIN++S + + + HV SL + ++ + + +D
Sbjct: 10 DLTEEQERQFAALYDLYSDWNSKINVISRKDIGNLYEHHVLHSLGIAKVVNFRPGTKIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LG+GGGFPGI +I + +L++S KK + + F R A +
Sbjct: 70 LGTGGGFPGIPLAILFPEVR---FHLMDSIGKKIRVAAEIADSIGLKNVTF--RHARAEE 124
Query: 138 MITTCDVISARALADLDTLLE 158
T D + +RA+ L LL+
Sbjct: 125 EKQTFDFVVSRAVMPLADLLK 145
>gi|312623582|ref|YP_004025195.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
gi|312204049|gb|ADQ47376.1| methyltransferase GidB [Caldicellulosiruptor kronotskyensis 2002]
Length = 238
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGG 83
L + L L+ +K NL + E+F I+H+ DSL + + + + ID+GSG G
Sbjct: 23 LIKYMNLVLEKNKHFNLTAIENEEEFVIKHIADSLSLLKFIEQENSNQNPVAIDIGSGFG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQMI 139
PG+ I + ++ V L +S KK F+ + G V R + +
Sbjct: 83 APGLFVKIAMPNMN---VFLNDSNKKKCKFMNEAKESLGISGVNVVCERAEVLGRKEEFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D + ARA+ L+ L EY+ P L
Sbjct: 140 EKFDFVFARAVDRLNVLCEYALPLLK 165
>gi|166368103|ref|YP_001660376.1| glucose inhibited division protein B [Microcystis aeruginosa
NIES-843]
gi|189045859|sp|B0JYE6|RSMG_MICAN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166090476|dbj|BAG05184.1| glucose inhibited division protein B [Microcystis aeruginosa
NIES-843]
Length = 225
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 15 LLNTYNVSRETLE---------KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L +++ +ETLE + + Y L L+ +++ NL + E+FW +H+ DSL
Sbjct: 3 LPELFDLWQETLEWQPDGAQQARFQQLYDLILEGNQRFNLTRITQPEEFWEKHLWDSLSG 62
Query: 66 F--------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
L IDLG+G GFPG+ +I V L++S KK +FL V
Sbjct: 63 LAWLQKSQPDLLTKSLSVIDLGTGAGFPGVPIAIAYPHW---SVTLLDSTQKKINFLEEV 119
Query: 118 VQKTAARGK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ K R + + + D++ RA+ ++D + Y+ P+L +
Sbjct: 120 IDKLELNNTKTRLGRAEIVGKNLKHNCAYDIVCLRAVGNVDICVNYALPFLKK 172
>gi|77920730|ref|YP_358545.1| methyltransferase GidB [Pelobacter carbinolicus DSM 2380]
gi|123573043|sp|Q39ZT2|RSMG_PELCD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77546813|gb|ABA90375.1| 16S rRNA m(7)G-527 methyltransferase [Pelobacter carbinolicus DSM
2380]
Length = 217
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 11 RANYLLNTYNVSRET--LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R LL +S E ++L ++ L+W+++INL + E+ +H+ DSL V L
Sbjct: 4 RLQELLTRIGLSLEKPVCDRLLWYLDEMLRWNRRINLTAIENKEEALEKHLLDSLTVVPL 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+D+GSG G P I I + V ++S +KK F ++V ++ +G +
Sbjct: 64 LRGDERLLDMGSGAGLPSIPIKIARPQM---CVLSVDSVHKKIVFQQHVARQLKLQGFEA 120
Query: 128 FACRIQEA--PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
ACRIQ + T+ DV++ARAL L LL + P L K
Sbjct: 121 RACRIQSLSQGESETSFDVVTARALTHLSDLLSMAEPLLNDK 162
>gi|270158241|ref|ZP_06186898.1| methyltransferase GidB [Legionella longbeachae D-4968]
gi|289163503|ref|YP_003453641.1| glucose inhibited division protein B GidB [Legionella longbeachae
NSW150]
gi|269990266|gb|EEZ96520.1| methyltransferase GidB [Legionella longbeachae D-4968]
gi|288856676|emb|CBJ10487.1| putative glucose inhibited division protein B GidB [Legionella
longbeachae NSW150]
Length = 208
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D L + L ++ + L + FL KW+ NL + VE +H+ DSL
Sbjct: 4 DGKIKLLLDQGLQSFGL-EAICTSLSDYLFLLNKWNAAYNLTAIRDVEAMVGKHILDSLA 62
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + ID+G+G G PGI ++ I L++S KK FL V ++
Sbjct: 63 ILPWLK-GNRIIDVGTGAGLPGIPLALAKPEIN---FVLLDSNGKKTRFLNEVKRQLNLE 118
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ R++ D + +RA + L +++++ + +
Sbjct: 119 NLEIVQIRVE-NYHPTQGFDTVLSRAFSSLGQMIQWTRHLIADE 161
>gi|162446949|ref|YP_001620081.1| glucose inhibited division protein B [Acholeplasma laidlawii PG-8A]
gi|189039369|sp|A9NEC5|RSMG_ACHLI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161985056|gb|ABX80705.1| glucose inhibited division protein B [Acholeplasma laidlawii PG-8A]
Length = 230
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IW 75
++ + + + +Y L + ++K NL ++ +D I+H DS+ + +L
Sbjct: 11 GIKLTEQQNGQFDAYYNLLVAYNKHTNLTRITSRDDADIKHFLDSVLISKLVDLNKVVTL 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+G+G GFP I I +I+ V ++ES+ K+ FL+ + Q + R +
Sbjct: 71 CDMGAGAGFPSIPLLIVFPNIQ---VTIVESQIKRVQFLQELKQALGLEFNIVHDRAENF 127
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARAL +L +LE+ P L
Sbjct: 128 SSKNYQQFDIVTARALGELRLILEFGVPMLK 158
>gi|116490228|ref|YP_809772.1| cell division SAM-dependent methyltransferase [Oenococcus oeni
PSU-1]
gi|290889610|ref|ZP_06552700.1| hypothetical protein AWRIB429_0090 [Oenococcus oeni AWRIB429]
gi|122277581|sp|Q04HG5|RSMG_OENOB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116090953|gb|ABJ56107.1| 16S rRNA m(7)G-527 methyltransferase [Oenococcus oeni PSU-1]
gi|290480808|gb|EFD89442.1| hypothetical protein AWRIB429_0090 [Oenococcus oeni AWRIB429]
Length = 242
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PS 73
+ +S + + + L++SKK+NL + +D W++H DSL P +
Sbjct: 13 QSLPISNRKMVLFQTYLEFLLEYSKKVNLTAIKEPKDIWLKHFYDSLTPLLYLPDMNKKA 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+GSG GFPG+ I + + L++S K+ +FL ++ K + + R
Sbjct: 73 SLIDIGSGAGFPGVPLKIVN---QKFQLTLLDSLQKRIAFLDQLIDKLNLKNVETVHGRA 129
Query: 133 QEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
++ D ARA+++ +TLLE P++
Sbjct: 130 EDFAHNLNYREKYDFAIARAVSNTNTLLELLLPFVK 165
>gi|225025343|ref|ZP_03714535.1| hypothetical protein EIKCOROL_02241 [Eikenella corrodens ATCC
23834]
gi|224941897|gb|EEG23106.1| hypothetical protein EIKCOROL_02241 [Eikenella corrodens ATCC
23834]
Length = 209
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D+ L+ N+S L L KW++ NL + + RH+ DSL
Sbjct: 2 DNKQQLQEGLAALGLNLSTAQQLLLLEHASLLQKWNRTYNLTALRRNDQIISRHILDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI T+I ++ + L+++ KK +FL+ V +
Sbjct: 62 LLPYVKEAKTLMDVGSGGGMPGIPTAICRPDLQ---ITLLDANTKKTAFLQQTVIELGLS 118
Query: 125 GKVF-ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A R++ DV+++RA A+L + L +
Sbjct: 119 NVTVAAGRVETI--YDKKVDVVTSRAFAELADFAALTKHLLNE 159
>gi|153811975|ref|ZP_01964643.1| hypothetical protein RUMOBE_02368 [Ruminococcus obeum ATCC 29174]
gi|149831874|gb|EDM86960.1| hypothetical protein RUMOBE_02368 [Ruminococcus obeum ATCC 29174]
Length = 200
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGL 100
+NL + ++ ++H DSL + + +D+G+G GFPG+ I +E
Sbjct: 1 MNLTGITEFQEVLVKHFLDSLACVKAVDMTKVSKIMDIGTGAGFPGVPLKIAFPHLEA-- 58
Query: 101 VNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITTCDVISARALADLDTL 156
L++S K+ +FL R +E + D+ +RA+++L TL
Sbjct: 59 -CLLDSLKKRVNFLEETFALLKLENITAIHGRAEEFAKNKAYREQYDLCVSRAVSNLATL 117
Query: 157 LEYSFPWLY 165
EY P++
Sbjct: 118 SEYCLPYVK 126
>gi|91218084|ref|ZP_01255034.1| glucose-inhibited division protein B [Psychroflexus torquis ATCC
700755]
gi|91183728|gb|EAS70121.1| glucose-inhibited division protein B [Psychroflexus torquis ATCC
700755]
Length = 211
Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ LL + ++ L++ E ++ W++KIN+VS +++ +IRHV S+ + ++ P+
Sbjct: 2 SLLLKYFPDLDDNQLKQFEKISEVYKDWNQKINVVSRKDIDEIYIRHVLHSMGIAKIQPF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
S +D+G+GGGFPGI +I E L++S KK + VV++ +
Sbjct: 62 LPGSKVLDVGTGGGFPGIPLAILFPETE---FTLVDSIGKKIKVVEDVVEELGLQNVKAI 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEY 159
R++ + D I +RA+A + + + +
Sbjct: 119 NDRVE---NISGEFDFIVSRAVAVMPSFVHW 146
>gi|167587940|ref|ZP_02380328.1| Glucose inhibited division protein [Burkholderia ubonensis Bu]
Length = 212
Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 13 LTDAQRNQLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
GSGGG PGI+ +I L + + L + KK++F + V R++
Sbjct: 73 GSGGGLPGIVLAIVLPDWQ---ITLNDIVQKKSAFQTQTRAELKLANLSVVTGRVETLQP 129
Query: 136 -PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ DVI +RA ADL ++ + + +
Sbjct: 130 GVEVPEKFDVIVSRAFADLSDFVKLARHLVAR 161
>gi|161523274|ref|YP_001578286.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans ATCC
17616]
gi|189351953|ref|YP_001947581.1| 16S rRNA methyltransferase GidB [Burkholderia multivorans ATCC
17616]
gi|238687050|sp|A9AJF2|RSMG_BURM1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160340703|gb|ABX13789.1| methyltransferase GidB [Burkholderia multivorans ATCC 17616]
gi|189335975|dbj|BAG45045.1| glucose inhibited division protein B [Burkholderia multivorans ATCC
17616]
Length = 228
Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
+S +L + L KW+ NL + + I+H+ DSL + + +D+
Sbjct: 29 LSDTQRNRLLDYVALLGKWNAVYNLTAIRDPQQMLIQHILDSLSIVPHLRGRASARVLDV 88
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP- 136
GSGGG PG++ +I + V L + KK++F + V R++
Sbjct: 89 GSGGGLPGLVLAIVEPDWQ---VTLNDIVQKKSAFQTQTRAELKLTNLSVVTGRVETLRP 145
Query: 137 --QMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ D+I +RA ADL ++ + +
Sbjct: 146 GVEVPEKFDIIVSRAFADLSDFVKLARHLVAP 177
>gi|162147022|ref|YP_001601483.1| methyltransferase gidB (glucose-inhibited divisio protein B)
[Gluconacetobacter diazotrophicus PAl 5]
gi|189039395|sp|A9HE10|RSMG_GLUDA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161785599|emb|CAP55170.1| putative methyltransferase gidB (Glucose-inhibited divisio protein
B) [Gluconacetobacter diazotrophicus PAl 5]
Length = 210
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V KL+ F + +W+ +INLVS + W RH+ D L++ L P D+G
Sbjct: 12 GVPDALRAKLDRFAEILTRWNSRINLVSPRDLAHLWDRHIADCLQLASLIPPGVRLADMG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG+I ++ V LIES +KA+FLR + AR + A RI++A I
Sbjct: 72 SGGGFPGLIIAMAT----DADVTLIESDQRKAAFLREAARAVGARVTIIARRIEDAD--I 125
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
V++ARALA L LLE+S +L
Sbjct: 126 PPVQVVTARALAALPQLLEWSSHFLAP 152
>gi|115350141|ref|YP_771980.1| 16S rRNA methyltransferase GidB [Burkholderia ambifaria AMMD]
gi|122324419|sp|Q0BJM7|RSMG_BURCM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115280129|gb|ABI85646.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia ambifaria AMMD]
Length = 228
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 QMLVDGTAALDIALTDAQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRDRASARVLDVGSGGGLPGIVLAIVRPDWQ---VTLNDIVQKKSAFQTQMRAELKLAN 132
Query: 126 -KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVELLQPGVDVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|83746958|ref|ZP_00944004.1| Methyltransferase gidB [Ralstonia solanacearum UW551]
gi|207744822|ref|YP_002261214.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum IPO1609]
gi|83726378|gb|EAP73510.1| Methyltransferase gidB [Ralstonia solanacearum UW551]
gi|206596232|emb|CAQ63159.1| methyltransferase gidb (glucose inhibited divisionprotein b)
[Ralstonia solanacearum IPO1609]
Length = 225
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A ++ L++L + L KW++ NL + D H+ DSL
Sbjct: 9 ADARSELDAGARALGLSLDAAQLDRLLAYQALLGKWNRVYNLTAIRDAGDMLTHHLLDSL 68
Query: 64 RVFQ--------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
P +D+GSGGG PGI +I I V +++ KK +FL
Sbjct: 69 AAVPRIAERVRRAQPEAPRVLDVGSGGGLPGIPLAIACPDI---GVTMVDIVQKKTAFLT 125
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E T VI++RA A+L+ + + L
Sbjct: 126 QCRAELGLGNAQSHWGHVEKLADATGYGVITSRAFAELNDFVRLAGHLLAP 176
>gi|300689822|ref|YP_003750817.1| glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum PSI07]
gi|299076882|emb|CBJ49495.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum PSI07]
Length = 223
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A + L++L + L KW++ NL + D H+ DSL
Sbjct: 7 ADTRSELDAGARALGLPLDAAQLDRLLAYQVLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 66
Query: 64 RVFQ--------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ P +D+GSGGG PGI +I I V +++ KK +FL
Sbjct: 67 AAVPRIAGLVRRVQPEAPRVLDVGSGGGLPGIPLAIACPDI---GVTMVDIVQKKTAFLT 123
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E T VI++RA A+L+ + + L
Sbjct: 124 QCRAELGLANAQSHWGHVEKLADATGYGVITSRAFAELNDFVRLAGHLLAP 174
>gi|209544084|ref|YP_002276313.1| methyltransferase GidB [Gluconacetobacter diazotrophicus PAl 5]
gi|209531761|gb|ACI51698.1| methyltransferase GidB [Gluconacetobacter diazotrophicus PAl 5]
Length = 209
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V KL+ F + +W+ +INLVS + W RH+ D L++ L P D+G
Sbjct: 11 GVPDALRAKLDRFAEILTRWNSRINLVSPRDLAHLWDRHIADCLQLASLIPPGVRLADMG 70
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG+I ++ V LIES +KA+FLR + AR + A RI++A I
Sbjct: 71 SGGGFPGLIIAMAT----DADVTLIESDQRKAAFLREAARAVGARVTIIARRIEDAD--I 124
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
V++ARALA L LLE+S +L
Sbjct: 125 PPVQVVTARALAALPQLLEWSSHFLAP 151
>gi|192360168|ref|YP_001984270.1| methyltransferase GidB [Cellvibrio japonicus Ueda107]
gi|238692447|sp|B3PIT7|RSMG_CELJU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190686333|gb|ACE84011.1| methyltransferase GidB [Cellvibrio japonicus Ueda107]
Length = 219
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 65/171 (38%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYL----LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
D NS+LR L E+L + F KW+K NL + V RH+
Sbjct: 2 SDVNSVLRKQLLNGAAQMGVAPGERQTEQLLAYIREFEKWNKAYNLSAVRDVTQMVARHL 61
Query: 60 EDSLRVFQLH---PYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
DSL V PYP + ID+G+GGG PGI +I L++S KK FL
Sbjct: 62 LDSLSVVPWIARSPYPLARMIDVGTGGGLPGIPLAIMFPE---KTFTLLDSNGKKTRFLF 118
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V R E + +RA A L + E L
Sbjct: 119 HVKTLLGLDNVTVENRRVEEFAPAGLFQGVISRAFASLQDMTEGCAGLLAP 169
>gi|296113034|ref|YP_003626972.1| methyltransferase GidB [Moraxella catarrhalis RH4]
gi|295920728|gb|ADG61079.1| methyltransferase GidB [Moraxella catarrhalis RH4]
gi|326571191|gb|EGE21215.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis BC7]
Length = 225
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PS 73
++ ++ + L W K NL + + ++ ++H+ D + + + P+
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G G P +I +I ++ ++S KK F+R + + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNITPIASRI 143
Query: 133 Q-EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q T DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGTYDVITSRAFASLTDFVSLATPCLAD 178
>gi|254246687|ref|ZP_04940008.1| Methyltransferase [Burkholderia cenocepacia PC184]
gi|124871463|gb|EAY63179.1| Methyltransferase [Burkholderia cenocepacia PC184]
Length = 228
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 GMLVEGTAALDLTLTDTQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRGRASARVLDVGSGGGLPGIVLAIVEPGWQ---VTLNDIVQKKSAFQTQMRAELKLAN 132
Query: 126 -KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|288818500|ref|YP_003432848.1| glucose inhibited division protein [Hydrogenobacter thermophilus
TK-6]
gi|288787900|dbj|BAI69647.1| glucose inhibited division protein [Hydrogenobacter thermophilus
TK-6]
gi|308752090|gb|ADO45573.1| methyltransferase GidB [Hydrogenobacter thermophilus TK-6]
Length = 196
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----- 71
N +++S + +E + KW+K L + E IRH DSL +
Sbjct: 9 NGFDLSDQQVELFYTYMQELKKWNKVHRLTAIEEEEQIVIRHFVDSLTLALCFEQKGLDV 68
Query: 72 -PSIWIDLGSGGGFPGIITSIQL-SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
D+GSGGGFPG+ I I + L+ES +KK +FL YV K +V
Sbjct: 69 KGKSVCDVGSGGGFPGVPLKIYYGPQIN---LTLVESVSKKCAFLEYVKAKLGLDYRVLC 125
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R ++ + + D++ RAL L+ ++ P L
Sbjct: 126 KRAEQLRE--NSFDIVVCRALGKLEDIV----PML 154
>gi|313205880|ref|YP_004045057.1| 16S rRNA m(7)g-527 methyltransferase [Riemerella anatipestifer DSM
15868]
gi|312445196|gb|ADQ81551.1| 16S rRNA m(7)G-527 methyltransferase [Riemerella anatipestifer DSM
15868]
gi|315022192|gb|EFT35220.1| Ribosomal RNA small subunit methyltransferase G [Riemerella
anatipestifer RA-YM]
gi|325336680|gb|ADZ12954.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Riemerella anatipestifer
RA-GD]
Length = 211
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++ + +L + ++ + + L+ +W++KIN++S + + +H+ SL + ++
Sbjct: 1 MKKDLILKYFPELTEQQQHQFALLEPLYKEWNEKINVISRKDTDSLYEKHILHSLGIAKV 60
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
P+ + +D+G+GGGFPGI +I +E LI+S KK ++ V + +
Sbjct: 61 MPFSEGTKVLDIGTGGGFPGIPLAIMFPEVE---FTLIDSIGKKIKVVQAVSEALELKNL 117
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ R + ++ + +RA+ + L +
Sbjct: 118 IAVHGRAE---KLKDKYHFVVSRAVTQMPVFLRW 148
>gi|110004186|emb|CAK98524.1| putative glucose inhibited division methyltransferase protein b
[Spiroplasma citri]
Length = 232
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 7/154 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-- 73
L ++ E ++L+ +Y ++ ++ +NL + E+ +++H DS + + +
Sbjct: 9 LPALQITPEQEKQLQVYYQYLIEQNQIMNLTTIIKEEEVYLKHFLDSGLLLKEFSFSKEM 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
D+GSG GFPG++ I +I+ + +IES K+ FL+ +V K +G ++ R
Sbjct: 69 TVSDVGSGAGFPGLVLKILCPTIK---LTIIESLEKRCLFLQRLVLKLQLKGVEIIHARA 125
Query: 133 QEAP-QMITTCDVISARALADLDTLLEYSFPWLY 165
+E + D++ +RA+A+L LLE +
Sbjct: 126 EEYSWAHSESFDIVVSRAVANLGMLLELVVRMVK 159
>gi|83720015|ref|YP_443811.1| 16S rRNA methyltransferase GidB [Burkholderia thailandensis E264]
gi|123536042|sp|Q2STD8|RSMG_BURTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83653840|gb|ABC37903.1| methyltransferase GidB [Burkholderia thailandensis E264]
Length = 231
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 17 QALLSEGAEALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV 76
Query: 67 QLH---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D+GSGGG PGI+ +I L + V L + KK++F +
Sbjct: 77 PHLGARGAAATALDVGSGGGLPGIVLAIALPGWQ---VTLNDIVQKKSAFQNQAKAELKL 133
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 134 GNLSVVTGRVETLRPGADVQGKFDVIVSRAFADLADFVTLARHLVAP 180
>gi|260424977|ref|ZP_05733847.2| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
gi|260403779|gb|EEW97326.1| 16S rRNA methyltransferase GidB [Dialister invisus DSM 15470]
Length = 244
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIWIDLG 79
+ + K+ + + + S+K+NL E+ ++++ DSL V+ + P +DLG
Sbjct: 22 DEDAVRKMAEYNAMVIAMSRKMNLTGIKDAEESLVKNIYDSLTVYEEKYFPKNGRMLDLG 81
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
+G GFPGI +I ++ V L++S KK F+ K + K+ R +E +
Sbjct: 82 TGAGFPGIPLAILRPDMQ---VVLVDSVLKKLVFIENAAAKLGIKNIKILHIRAEEGGRR 138
Query: 139 ---ITTCDVISARALADLDTLLEYSFPWLYQ 166
T D+++ARA+ L + E+ P++ +
Sbjct: 139 RKTRETFDMVTARAVKMLPVIAEWGIPFVKE 169
>gi|167620985|ref|ZP_02389616.1| methyltransferase GidB [Burkholderia thailandensis Bt4]
Length = 213
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 1 MLSEGAEALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH 60
Query: 69 H---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I L + V L + KK++F +
Sbjct: 61 LGARGAAATALDVGSGGGLPGIVLAIALPGWQ---VTLNDIVQKKSAFQNQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGADVQGKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|326573109|gb|EGE23078.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis CO72]
Length = 225
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PS 73
++ ++ + L W K NL + + ++ ++H+ D + + + P+
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G G P +I +I ++ ++S KK F+R + + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNITPIASRI 143
Query: 133 Q-EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q T DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGTYDVITSRAFASLTDFVSLATPCLAD 178
>gi|119503565|ref|ZP_01625648.1| glucose inhibited division protein B [marine gamma proteobacterium
HTCC2080]
gi|119460627|gb|EAW41719.1| glucose inhibited division protein B [marine gamma proteobacterium
HTCC2080]
Length = 210
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 5/167 (2%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M + + RA L+ +S +KL + L +W++ NL + RH+
Sbjct: 1 MHDALAQQLERALTQLD-LPLSAAQQKKLIAYVELINRWNRAYNLTAVRDPMAMVTRHLL 59
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + P I +D+G+G G PGI ++ +L++ KK FL V
Sbjct: 60 DSLAISPHIP-AGITLDVGTGPGLPGIPLAVAFPDQR---FHLLDGNGKKTRFLFQVKND 115
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E Q+ D I +RA A L +++ L +
Sbjct: 116 LLLTNVDIKETRVENFQVDRGYDCIVSRAFASLSSMINSCQHLLSPQ 162
>gi|170731466|ref|YP_001763413.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia MC0-3]
gi|169814708|gb|ACA89291.1| methyltransferase GidB [Burkholderia cenocepacia MC0-3]
Length = 228
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 GMLVEGTAALDLTLTDTQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRGRTSAHVLDVGSGGGLPGIVLAIVEPGWQ---VTLNDIVQKKSAFQTQMRAELKLAN 132
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|310830135|ref|YP_003962492.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
gi|308741869|gb|ADO39529.1| glucose-inhibited division protein B [Eubacterium limosum KIST612]
Length = 239
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L A + + + + L ++KIN+ + V++F +H+ DSL +
Sbjct: 7 LMAAGEKCGIAIDEKQSRLMILYMEKLLVMNEKINVTRITDVDEFIEKHLIDSLTCLKFI 66
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H +D+G+GGGFPG+ ++ L E + ++++ KK + + ++ + F
Sbjct: 67 HKDVKSILDVGTGGGFPGVPLAVMLPEAE---ITMMDATGKKLKVIEDICREIGIKNVEF 123
Query: 129 -ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ P D I +RA+A+L L E P +
Sbjct: 124 LHGRAEDLGKDPAYREGYDCIVSRAVANLCLLSELCLPLAKK 165
>gi|167838436|ref|ZP_02465295.1| methyltransferase GidB [Burkholderia thailandensis MSMB43]
Length = 213
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 1 MLSDGAEALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH 60
Query: 69 HPYPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+GSGGG PGI+ +I L + V L + KK++F +
Sbjct: 61 LGACGAAVSALDVGSGGGLPGIVLAIALPGWQ---VALNDIVQKKSAFQNQAKAELKLGN 117
Query: 126 -KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGVEVPGKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|299065187|emb|CBJ36353.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum CMR15]
Length = 224
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A + L++L + L KW++ NL + V D H+ DSL
Sbjct: 8 ADTRSELEAGARALGLPLEGVQLDRLLAYQVLLAKWNRVYNLTAIRDVGDMLTHHLLDSL 67
Query: 64 RVFQ--------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ P +D+GSGGG PGI +I I V +++ KK +FL
Sbjct: 68 AAVPRIAERVRSVQPEAPRVLDVGSGGGLPGIPLAIACPDI---SVTMVDIVQKKTAFLT 124
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E VI++RA A+L+ + + L
Sbjct: 125 QCRAELGLTNAQSHWGHVEKLADAVGYGVITSRAFAELNDFVRLAGHLLAP 175
>gi|325284181|ref|YP_004256722.1| Ribosomal RNA small subunit methyltransferase G [Deinococcus
proteolyticus MRP]
gi|324315990|gb|ADY27105.1| Ribosomal RNA small subunit methyltransferase G [Deinococcus
proteolyticus MRP]
Length = 255
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 8/163 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L+ + ++ ++ Y L+ S ++NL + + D ++H DSL
Sbjct: 23 LLQGAAAEGGHPLTSAQTKQFAGLYGRLLEGSAQMNLTALQSERDIVLKHFVDSLGCLNA 82
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +DLG+G GFP + +I + + +++ KK +F+ Q +
Sbjct: 83 GEWATGAAVLDLGTGAGFPALPLAIVRPDLR---ITALDATAKKVAFVERTAQALGLAVQ 139
Query: 127 VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E PQ DV+ RA+A L L E + P L
Sbjct: 140 GLTGRAEEVGRDPQHRGAYDVVVTRAVAALPVLAELALPLLKP 182
>gi|256840502|ref|ZP_05546010.1| 16S rRNA methyltransferase GidB [Parabacteroides sp. D13]
gi|256737774|gb|EEU51100.1| 16S rRNA methyltransferase GidB [Parabacteroides sp. D13]
Length = 230
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E+ Y L+ W+ KIN++S +E+ + HV SL + + + S +D
Sbjct: 34 DLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSVMD 93
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I +L++S KK + V + F CR +E
Sbjct: 94 LGTGGGFPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAIGLENVSFRHCRGEEEK 150
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L L++
Sbjct: 151 QL---FDFVVSRAVMPLADLVK 169
>gi|218263050|ref|ZP_03477295.1| hypothetical protein PRABACTJOHN_02976 [Parabacteroides johnsonii
DSM 18315]
gi|218222983|gb|EEC95633.1| hypothetical protein PRABACTJOHN_02976 [Parabacteroides johnsonii
DSM 18315]
Length = 223
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ +++ + L+ W+ KIN++S +E+ ++ HV SL + ++ + S +D+
Sbjct: 28 LTDAQKLQIDALFDLYSDWNSKINVISRKDIENLYLHHVLHSLGILKMLKFKEGSTVMDI 87
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ 137
G+GGGFPGI +I L + +L++S KK + V + + F CR +E Q
Sbjct: 88 GTGGGFPGIPLAILLPEVR---FHLVDSIGKKIKVGQAVAEAIGLKNVTFRHCRAEEEKQ 144
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ D + +RA+ L L + + + +++
Sbjct: 145 L---FDFVVSRAVMPLADLAKIARKNIKKEQ 172
>gi|120608763|ref|YP_968441.1| 16S rRNA methyltransferase GidB [Acidovorax citrulli AAC00-1]
gi|189039370|sp|A1TI79|RSMG_ACIAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120587227|gb|ABM30667.1| 16S rRNA m(7)G-527 methyltransferase [Acidovorax citrulli AAC00-1]
Length = 243
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ LRA ++S L +L F L KW++ NL + ++ H+ DSL
Sbjct: 9 SAPLRAGAEALGLDLSEAHLGQLLEFLALLQKWNQVYNLTAVRDPQEMLTHHLLDSLAAV 68
Query: 67 QLHP----------------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+D+GSGGG PG++ +I +++ V+ +++ KK
Sbjct: 69 APLQRHLRGMQDLPGSAGDGAKLRLLDVGSGGGLPGVVFAICCPALD---VSCVDTVAKK 125
Query: 111 ASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A+F++ R + R++ + DV+S RA A L + +S
Sbjct: 126 AAFIQQAAVSLRLRNLRGIHARVE---NLAGPFDVVSCRAFASLPDFVAWS 173
>gi|332705995|ref|ZP_08426068.1| 16S rRNA m(7)G-527 methyltransferase [Lyngbya majuscula 3L]
gi|332355255|gb|EGJ34722.1| 16S rRNA m(7)G-527 methyltransferase [Lyngbya majuscula 3L]
Length = 248
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----VFQLHPYPS 73
+ + E + + Y L ++++NL + E+FW +H+ DSL ++Q
Sbjct: 22 NWQPAPEQQQLFQKLYEGILSGNRQLNLTRITAPEEFWEKHLWDSLVGLAPIWQSITPGQ 81
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFPG+ +I + + L++S KK +FL+ ++ + R
Sbjct: 82 RIIDIGTGAGFPGLPVAIAFPNT---AITLLDSTRKKITFLQTLIPQLEINNVTTLVGRA 138
Query: 133 Q---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + Q + D+ RA++ EY+ P L Q
Sbjct: 139 EAIGQKQQHRHSYDIALVRAVSAPSVCAEYALPLLKQ 175
>gi|170699463|ref|ZP_02890506.1| methyltransferase GidB [Burkholderia ambifaria IOP40-10]
gi|170135612|gb|EDT03897.1| methyltransferase GidB [Burkholderia ambifaria IOP40-10]
Length = 228
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 QMLVDGTAALDIALTDAQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRDRASARVLDVGSGGGLPGIVLAIVQPDWQ---VTLNDIVQKKSAFQTQMRAELKLAN 132
Query: 126 -KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVELLQPGVDVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|150007125|ref|YP_001301868.1| 16S rRNA methyltransferase GidB [Parabacteroides distasonis ATCC
8503]
gi|189045872|sp|A6L982|RSMG_PARD8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149935549|gb|ABR42246.1| glucose-inhibited division protein [Parabacteroides distasonis ATCC
8503]
Length = 230
Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E+ Y L+ W+ KIN++S +E+ + HV SL + + + S +D
Sbjct: 34 DLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSVMD 93
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I +L++S KK + V + F CR +E
Sbjct: 94 LGTGGGFPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAIGLENVSFRHCRGEEEK 150
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L L++
Sbjct: 151 QL---FDFVVSRAVMPLADLVK 169
>gi|323144402|ref|ZP_08079010.1| 16S rRNA methyltransferase GidB [Succinatimonas hippei YIT 12066]
gi|322415855|gb|EFY06581.1| 16S rRNA methyltransferase GidB [Succinatimonas hippei YIT 12066]
Length = 220
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 1 MKYCDSNSILRANYLLNTYN---------VSRETLEKLEYFYFLFLKWSKKINLVSSSTV 51
M + ++ +A+YL E ++KL L KW+K +NL S
Sbjct: 1 MSFNKHTALPQADYLCKKIKELLFKTAVVFDDEKVQKLAELVILLCKWNKALNLTSIKDP 60
Query: 52 EDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
+D + H+ DS + L D+G+G GFPG++ +I LI+S KK
Sbjct: 61 DDMVVLHILDSAVISPLL-TGKNIADVGTGAGFPGLVLAILNPDKH---FTLIDSVAKKL 116
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
SF++ + E + + D I +RA A L ++E+ L K
Sbjct: 117 SFVKSASVQLKLENVTLINDRCENIKPLVPFDCIVSRAFAPLGRMVEWCIHLLDDK 172
>gi|107024503|ref|YP_622830.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia AU 1054]
gi|116688118|ref|YP_833741.1| methyltransferase GidB [Burkholderia cenocepacia HI2424]
gi|122978515|sp|Q1BR98|RSMG_BURCA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039488|sp|A0K2X1|RSMG_BURCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|105894692|gb|ABF77857.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia cenocepacia AU
1054]
gi|116646207|gb|ABK06848.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia cenocepacia
HI2424]
Length = 228
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + I+H+ DSL +
Sbjct: 16 GMLVEGTAALDLTLTDTQRNQLLDYVALLGKWNAVYNLTAIRDPMQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRGRTSARVLDVGSGGGLPGIVLAIVEPGWQ---VTLNDIVQKKSAFQTQMRAELKLAN 132
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|172059161|ref|YP_001806813.1| 16S rRNA methyltransferase GidB [Burkholderia ambifaria MC40-6]
gi|238689147|sp|B1YQK3|RSMG_BURA4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171991678|gb|ACB62597.1| methyltransferase GidB [Burkholderia ambifaria MC40-6]
Length = 228
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 QMLVDGTAALDIALTDAQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRDRASARVLDVGSGGGLPGIVLAIVQPDWQ---VTLNDIVQKKSAFQTQMRAELKLAN 132
Query: 126 -KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVELLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|327402673|ref|YP_004343511.1| 16S rRNA m(7)G-527 methyltransferase [Fluviicola taffensis DSM
16823]
gi|327318181|gb|AEA42673.1| 16S rRNA m(7)G-527 methyltransferase [Fluviicola taffensis DSM
16823]
Length = 217
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
Y + L Y ++ ++ E L+L W+ +IN++S DF+ HV S
Sbjct: 5 YIKMSVELIEKYFPK---LTAVQKKQFERLEELYLFWNAQINVISRKDTADFYEHHVLHS 61
Query: 63 LRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + ++ + S +D+G+GGGFPGI +I ++ +L++S KK + + Q
Sbjct: 62 LGIAKIMEFAPGSSVLDIGTGGGFPGIPLAILFPEVQ---FHLVDSIGKKIKVVNEIAQA 118
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF-PWLYQKK 168
+ A + D I +RA+ + L ++ +L + K
Sbjct: 119 LDLKN--VCGTHARAEDIKEQFDFIVSRAVTAMPAFLPWTKGKFLKENK 165
>gi|325525644|gb|EGD03418.1| 16S rRNA methyltransferase GidB [Burkholderia sp. TJI49]
Length = 228
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 QMLVEGAAALDLALTDTQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + + L + KK++F +
Sbjct: 76 HLRGRASARVLDVGSGGGLPGIVLAIVEPDWQ---ITLNDIVQKKSAFQTQTRAELKLAN 132
Query: 126 -KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|159027599|emb|CAO86971.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 225
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 15 LLNTYNVSRETLE---------KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L +++ +ETLE + + Y L L+ +++ NL + E+FW +H+ DSL
Sbjct: 3 LPELFDLWQETLEWQPDGARQARFQQLYELILEGNQRFNLTRITQPEEFWEKHLWDSLSG 62
Query: 66 F--------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
L P IDLG+G GFPG+ +I S V L++S KK +FL V
Sbjct: 63 LAWLQKSQPDLLTKPLSVIDLGTGAGFPGLPIAIAYSHW---SVTLLDSTQKKINFLEEV 119
Query: 118 VQKTAARGK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ K R + + + D++ RA+ ++D + Y+ P+L +
Sbjct: 120 IDKLELNNTKTRLGRAEIVGKNLKHNCAYDIVCLRAVGNVDICVNYALPFLKK 172
>gi|254450602|ref|ZP_05064039.1| methyltransferase GidB [Octadecabacter antarcticus 238]
gi|198265008|gb|EDY89278.1| methyltransferase GidB [Octadecabacter antarcticus 238]
Length = 202
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 5/151 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWI 76
+VSRET++KLE L KW+K INL++ ++V D W RH+ DS +VF P + W
Sbjct: 6 GVDVSRETMDKLEQLCALITKWTKAINLIAPNSVPDLWDRHIVDSAQVFHCAPDDWTCWT 65
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLGSGGG P ++ +I + + LIES +K FL+ ++ K+ RI +A
Sbjct: 66 DLGSGGGLPALVVAIL--DQQKRPMTLIESDQRKCLFLKTARRELGLDIKIVNKRITDAD 123
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV+SARALA L LL Y+ +L +
Sbjct: 124 --VAKADVLSARALAPLSDLLGYAEKFLRPE 152
>gi|332971535|gb|EGK10485.1| glucose inhibited division protein B [Kingella kingae ATCC 23330]
Length = 216
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+ NL + H+ DSL + +D+GSGGG PGI T+I ++
Sbjct: 42 KWNSTYNLTALRDENQMISHHILDSLTLLPYVQNAQSMMDVGSGGGMPGIPTAICRPDLQ 101
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISARALADLDTL 156
+ L+++ KK +FL+ + + A R++ DV+++RA A+L
Sbjct: 102 ---ITLLDANTKKTTFLQQAAIELGLKNVTVASGRVE--AMHDKKVDVVTSRAFAELHDF 156
Query: 157 LEYSFPWLYQK 167
+ + L ++
Sbjct: 157 VALTKHLLNEQ 167
>gi|186477784|ref|YP_001859254.1| 16S rRNA methyltransferase GidB [Burkholderia phymatum STM815]
gi|184194243|gb|ACC72208.1| methyltransferase GidB [Burkholderia phymatum STM815]
Length = 225
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L +++ + KL + L KW+ NL + I+H+ DSL +
Sbjct: 16 GLLDEGVHELGFDLRADQKGKLLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVP 75
Query: 68 LH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + + + + KK++F V +
Sbjct: 76 HLASLERASALDVGSGGGLPGIVLAIVFPAW---SITVNDIVQKKSAFQSQVKAELGLTN 132
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ DVI +RA A+L + + +
Sbjct: 133 LSVVTGRVERLQPGVEVPGKFDVIVSRAFAELADFVTLARHLVAD 177
>gi|218246901|ref|YP_002372272.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
gi|218167379|gb|ACK66116.1| methyltransferase GidB [Cyanothece sp. PCC 8801]
Length = 240
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQL----HPYP 72
+N + ++ + Y + +++INL + DFW +H+ DSL + +
Sbjct: 14 NWNPNPSQQKQWDKLYHEIILANRQINLTRITEPNDFWEKHLWDSLAGILDIEIINLEQS 73
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPGI I + + V L +S KK +F++ ++++ + + R
Sbjct: 74 LKVIDIGTGAGFPGIPIGIVCPNWQ---VTLFDSTRKKINFIKILLEELSLKNCHTLIGR 130
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+E Q + D+ RA+ + EY+ P L
Sbjct: 131 AEEIGQNPSHRESYDLALIRAVGEASVCAEYTLPLLK 167
>gi|218779527|ref|YP_002430845.1| methyltransferase GidB [Desulfatibacillum alkenivorans AK-01]
gi|218760911|gb|ACL03377.1| methyltransferase GidB [Desulfatibacillum alkenivorans AK-01]
Length = 223
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L LEK F L + + ++NL S D ++H DSL
Sbjct: 13 DLLSQGAKALGQAPDENALEKCAAFARLLAQANNRVNLSSIRDPRDMAVKHFADSLAPIP 72
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK- 126
P + D+GSG GFPG++ +I ++ + IE+ KKA+F R+ +
Sbjct: 73 YIPEGAKVADIGSGAGFPGLVLAIFRPDLQ---LTSIETIRKKANFQRHAALELGLSNVK 129
Query: 127 VFACRIQEAPQMITT---CDVISARALADLDTLLEYSFPWLYQK 167
++ R + D + RAL+DL +L ++ P L K
Sbjct: 130 IYNIRAENWKTEGDKGLLFDAVVCRALSDLSAILSWARPMLAPK 173
>gi|262381122|ref|ZP_06074260.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_33B]
gi|262296299|gb|EEY84229.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_33B]
Length = 223
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 2 KYCDSNSILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
+Y + + + L + + +++ E+ Y L+ W+ KIN++S +E+ + HV
Sbjct: 8 RYPMEQNTEKFSILTSYFPDLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVL 67
Query: 61 DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
SL + + + S +DLG+GGGFPGI +I +L++S KK + V
Sbjct: 68 HSLGITDMLRFKPGSSVMDLGTGGGFPGIPLAILFPETH---FHLVDSIGKKIKVGQAVA 124
Query: 119 QKTAARGKVF-ACRIQEAPQMITTCDVISARALADLDTLLE 158
+ F CR +E Q+ D + +RA+ L L++
Sbjct: 125 EAIGLENISFRHCRGEEEKQL---FDFVVSRAVMPLADLVK 162
>gi|197294687|ref|YP_001799228.1| 16S rRNA methyltransferase GidB [Candidatus Phytoplasma
australiense]
gi|226725361|sp|B1VAK6|RSMG_PHYAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|171854014|emb|CAM11979.1| Glucose-inhibited division protein B [Candidatus Phytoplasma
australiense]
Length = 208
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L + L + ++ L++ + +Y + +KK NL + ++ D + +H DSL + ++
Sbjct: 1 MLYPDLLTKKFKLNPHQLQQFDLYYRFLNQENKKYNLTALISLSDVYCKHFYDSLILKEI 60
Query: 69 HPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ I D+GSG GFP I +++ + ++ES KK +FL+ + +
Sbjct: 61 LDFNQIQNVCDVGSGAGFPSFPLKIIYPNLK---ITIVESSLKKINFLKQLTVVLGLKNI 117
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
F Q A + + D + RAL LD +L++ + +
Sbjct: 118 CFV--HQRAEKHTLSYDCVLVRALGRLDLILKWCRLLIKK 155
>gi|298377550|ref|ZP_06987502.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_19]
gi|301311210|ref|ZP_07217138.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 20_3]
gi|298265569|gb|EFI07230.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 3_1_19]
gi|300830784|gb|EFK61426.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 20_3]
Length = 230
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E+ Y L+ W+ KIN++S +E+ + HV SL + + + S +D
Sbjct: 34 DLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSVMD 93
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I +L++S KK + V + F CR +E
Sbjct: 94 LGTGGGFPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAIGLENVSFRHCRGEEEK 150
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L L++
Sbjct: 151 QL---FDFVVSRAVMPLADLVK 169
>gi|206558429|ref|YP_002229189.1| 16S rRNA methyltransferase GidB [Burkholderia cenocepacia J2315]
gi|238693059|sp|B4E582|RSMG_BURCJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|198034466|emb|CAR50331.1| methyltransferase GidB [Burkholderia cenocepacia J2315]
Length = 228
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 QMLVEGTAALDLTLTDAQRNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRGRTSARVLDVGSGGGLPGIVLAIVEPGWQ---VTLNDIVQKKSAFQTQMRAELKLVN 132
Query: 126 -KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|325265689|ref|ZP_08132378.1| glucose inhibited division protein B [Kingella denitrificans ATCC
33394]
gi|324982820|gb|EGC18443.1| glucose inhibited division protein B [Kingella denitrificans ATCC
33394]
Length = 210
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 6/164 (3%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ L+ ++ L + L KW+ NL + H+ DSL
Sbjct: 2 TELKEQLKLGLQAMHLDLPTAQQLLLLEYVALLKKWNHTYNLTALRDENQMISHHILDSL 61
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+GSGGG PGI +I + + L++S KK SFL+ V +
Sbjct: 62 TLLPYIKNATSMMDVGSGGGMPGIPAAICRPDLN---ITLLDSNTKKTSFLQQAVIELGL 118
Query: 124 RGKVFA-CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ A R++ DV+++RA A+L + + L +
Sbjct: 119 QNVTVASGRVE--AMHDKKVDVVTSRAFAELHDFIALTKHLLNE 160
>gi|326560412|gb|EGE10794.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 7169]
gi|326564015|gb|EGE14260.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 103P14B1]
gi|326576131|gb|EGE26047.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 101P30B1]
gi|326577084|gb|EGE26978.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis O35E]
Length = 225
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PS 73
++ ++ + L W K NL + + ++ ++H+ D + + + P+
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G G P +I +I ++ ++S KK F+R + + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNITPIASRI 143
Query: 133 Q-EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGAYDVITSRAFASLTDFVSLATPCLAD 178
>gi|323345433|ref|ZP_08085656.1| glucose inhibited division protein B [Prevotella oralis ATCC 33269]
gi|323093547|gb|EFZ36125.1| glucose inhibited division protein B [Prevotella oralis ATCC 33269]
Length = 208
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N++ E + E L+ +W+ KIN++S ++ + HV SL + + + + +D
Sbjct: 12 NLTDEQQYQFEQLAPLYEEWNAKINVISRKDIDHLYEHHVLHSLAIAKEISFVSGTTVLD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I + LI+S KK + + R +
Sbjct: 72 VGTGGGFPGIPLAILFPNCR---FKLIDSIGKKVKVAAEIAAHIGLKNVDTEHLRGE--- 125
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA+ L + +
Sbjct: 126 NEKGKYDFVVSRAVMSLPDMAKL 148
>gi|189426682|ref|YP_001953859.1| methyltransferase GidB [Geobacter lovleyi SZ]
gi|189422941|gb|ACD97339.1| methyltransferase GidB [Geobacter lovleyi SZ]
Length = 215
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +L ++ + E L+W+KKINL + + ++ I+H+ DSL +
Sbjct: 2 NRELLTKAVAELNLELTEQQYGACELLLQELLRWNKKINLTAITGRDEMTIKHLIDSLHL 61
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+GSG GFP ++ +I L+ I++ KK SF +++ +
Sbjct: 62 VPELRPGDRILDVGSGAGFPALVLAIVRPDC---LITSIDAVGKKISFQKHIGRLLKLTN 118
Query: 126 -KVFACRIQ-EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ R++ A D++++RA + L+ +E + P +
Sbjct: 119 LEPLHGRVELLAADRSGGFDLVTSRAFSSLELFVELAAPLV 159
>gi|300702503|ref|YP_003744103.1| glucose-inhibited division protein b,
s-adenosyl-l-methionine-dependent methyltransferase
[Ralstonia solanacearum CFBP2957]
gi|299070164|emb|CBJ41455.1| Glucose-inhibited division protein B,
S-adenosyl-L-methionine-dependent methyltransferase
[Ralstonia solanacearum CFBP2957]
Length = 226
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A ++ L++L + L KW++ NL + D H+ DSL
Sbjct: 10 ADARSELDAGARGLGLSLDAAQLDRLLAYQALLGKWNRVYNLTAIREAGDMLTHHLLDSL 69
Query: 64 RVFQ--------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ P +D+GSGGG PGI +I I V +++ KK +FL
Sbjct: 70 AAVPRIAERVRRVQPEAPRVLDVGSGGGLPGIPLAIACPDI---GVTMVDIVQKKTAFLT 126
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E T VI++RA A+L+ + + L
Sbjct: 127 QCRAELGLGNAQSHWGHVEKLTDATGYGVITSRAFAELNDFVRLAGHLLAP 177
>gi|121602982|ref|YP_980311.1| 16S rRNA methyltransferase GidB [Polaromonas naphthalenivorans CJ2]
gi|189040705|sp|A1VIB2|RSMG_POLNA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120591951|gb|ABM35390.1| 16S rRNA m(7)G-527 methyltransferase [Polaromonas naphthalenivorans
CJ2]
Length = 221
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 16/165 (9%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S L+ +S + + +L + + KW++ NL S + H+ DSL
Sbjct: 9 RSTLKVGLEALQLQLSEQQINQLLAYQAMIAKWTQVYNLTSVRDPAEMMTHHLLDSLAAV 68
Query: 67 QL---------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
S +D+GSG G PG++ +I + V +++ KKA+F++
Sbjct: 69 PALQRYLHRSGLEQGSRLLDVGSGAGLPGVVIAICCPQV---AVTCVDTVAKKAAFIKQA 125
Query: 118 VQKTAARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
R++ + + DVI +RA A L ++S
Sbjct: 126 ALALRLPNLTGLHARVE---SITESFDVICSRAFASLADFTKWSA 167
>gi|326561363|gb|EGE11719.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 46P47B1]
Length = 224
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PS 73
++ ++ + L W K NL + + ++ ++H+ D + + + P+
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRI 132
+D+G+G G P +I +I ++ ++S KK F+R + + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNITPIASRI 143
Query: 133 Q-EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGAYDVITSRAFASLTDFVSLATPCLAD 178
>gi|332531224|ref|ZP_08407137.1| 16S rRNA methyltransferase GidB [Hylemonella gracilis ATCC 19624]
gi|332039331|gb|EGI75744.1| 16S rRNA methyltransferase GidB [Hylemonella gracilis ATCC 19624]
Length = 225
Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--- 66
L + +S +L + L KW+K NL + E+ H+ DS+ V
Sbjct: 14 LESGAAALGLALSDTQRTQLLDYLALVQKWNKVYNLTALRDAEEMLTHHLLDSMAVIAPL 73
Query: 67 --QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
Q P +D+GSG G PG++ +I I+ V +++ KKA+F++ V
Sbjct: 74 RRQTQGQPVRLLDVGSGAGLPGVVIAICCPEID---VTCVDTVAKKATFIQQVAIALKLP 130
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
R++ + DV+S+RA A L +SF
Sbjct: 131 HLHGVHARVE---SLSGPFDVVSSRAFASLADFTAWSF 165
>gi|312794737|ref|YP_004027660.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181877|gb|ADQ42047.1| methyltransferase GidB [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 238
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 12 ANYLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ +L YNV + + L L+ +K NL + E+F I+H+ DSL + +
Sbjct: 4 LDRVLEYYNVKNTLVVKQLFLKYMNLVLEKNKLFNLTAIEDEEEFVIKHIADSLSLLKFL 63
Query: 70 PYPSIW-----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
S ID+GSG G PG+ I + SI V L +S KK +F+ +
Sbjct: 64 EEESSIQNPVAIDIGSGFGAPGLFVKIAMPSIN---VWLNDSNKKKCNFMIEAKESLGIS 120
Query: 125 GK-VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
G + R + D + ARA+ L+ L EY+ P L
Sbjct: 121 GVNIVCERAEVLGRKEDFREKFDFVFARAVDKLNVLCEYALPLLK 165
>gi|255015260|ref|ZP_05287386.1| 16S rRNA methyltransferase GidB [Bacteroides sp. 2_1_7]
Length = 220
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E+ Y L+ W+ KIN++S +E+ + HV SL + + + S +D
Sbjct: 24 DLTDRQKEQYAALYDLYTDWNAKINVISRKDIENLYPHHVLHSLGITDMLRFKPGSSVMD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I +L++S KK + V + F CR +E
Sbjct: 84 LGTGGGFPGIPLAILFPETH---FHLVDSIGKKIKVGQAVAEAIGLENVSFRHCRGEEEK 140
Query: 137 QMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L L++
Sbjct: 141 QL---FDFVVSRAVMPLADLVK 159
>gi|327482901|gb|AEA86211.1| 16S rRNA methyltransferase GidB [Pseudomonas stutzeri DSM 4166]
Length = 215
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGSGGGFPGIITSIQLSS 95
+KW+K NL + ++ RH+ DSL V W+D+GSGGG PG+ +I
Sbjct: 39 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAEGGRNWLDVGSGGGMPGVPLAIMFPE 98
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
L++S KK FL V + +V R+++ Q D I++RA + L+
Sbjct: 99 ---RAFTLLDSNGKKTRFLTQVKLELKLANLEVVHARVEQF-QPSIAFDGITSRAFSSLE 154
Query: 155 TLLEYSFPW 163
++
Sbjct: 155 DFASWTRHL 163
>gi|17548044|ref|NP_521446.1| glucose inhibited division protein B [Ralstonia solanacearum
GMI1000]
gi|20177886|sp|Q8XU66|RSMG_RALSO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|17430350|emb|CAD17115.1| probable methyltransferase gidb (glucose inhibited divisionprotein
b) [Ralstonia solanacearum GMI1000]
Length = 223
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A + L++L + L KW++ NL + D H+ DSL
Sbjct: 7 ADTRSELEAGARALGLPLEGVQLDRLLAYQVLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 66
Query: 64 RVFQ--------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ P S +D+GSGGG PGI +I I V +++ KK +FL
Sbjct: 67 AAVPRIAELVRRVQPEASRVLDVGSGGGLPGIPLAIACPDI---GVTMVDIVQKKTAFLT 123
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E VI++RA A+L+ + + L
Sbjct: 124 QCRAELGLTNAQSHWGHVEKLADAVGYGVITSRAFAELNDFVRLAGHLLAP 174
>gi|149912891|ref|ZP_01901425.1| glucose-inhibited division protein B [Roseobacter sp. AzwK-3b]
gi|149813297|gb|EDM73123.1| glucose-inhibited division protein B [Roseobacter sp. AzwK-3b]
Length = 203
Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats.
Identities = 63/150 (42%), Positives = 90/150 (60%), Gaps = 4/150 (2%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWID 77
NVSRET+E+L + L KW+ +INLV+ ST+ D W RH DS++++ L P+P W+D
Sbjct: 7 LNVSRETVERLTIYEALLRKWTPRINLVARSTLPDLWQRHFVDSIQIYDLAPHPVDHWVD 66
Query: 78 LGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
LGSG GFPG++ +I L+ES +K FL V+++T AR V RI+ P
Sbjct: 67 LGSGAGFPGLLMAILSLETGSPKRTTLVESDVRKCVFLNTVIRETGARADVINDRIENIP 126
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V+SARALADL TLL ++ +
Sbjct: 127 PLEAN--VLSARALADLTTLLGFAERHMRP 154
>gi|295132808|ref|YP_003583484.1| glucose-inhibited division protein B [Zunongwangia profunda SM-A87]
gi|294980823|gb|ADF51288.1| glucose-inhibited division protein B [Zunongwangia profunda SM-A87]
Length = 209
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+S E + E L+ W+ KIN+VS +++ ++RHV SL + ++ + + +D
Sbjct: 10 GLSPEQITHFERLEDLYKDWNLKINVVSRKDIDELYLRHVLHSLGIAKVQKFNPGAHILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I + +L++S KK + VV+ + R++
Sbjct: 70 VGTGGGFPGIPMAILFPEV---SFHLVDSIGKKMKVVEEVVEGLGLQNVKTTNDRVE--- 123
Query: 137 QMITTCDVISARALADLDTLLEYS 160
+ D I +RA+A + T + ++
Sbjct: 124 NIDGHYDFIISRAVAAMPTFVRWT 147
>gi|241664776|ref|YP_002983136.1| 16S rRNA methyltransferase GidB [Ralstonia pickettii 12D]
gi|240866803|gb|ACS64464.1| methyltransferase GidB [Ralstonia pickettii 12D]
Length = 222
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ S L A ++ +++L + L KW++ NL + D H+ DSL
Sbjct: 6 TDARSELEAGARALGLSLDEAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 65
Query: 64 RVF--------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ P +D+GSGGG PGI +I + V +++ KK +FL
Sbjct: 66 SAVSRIAELARRAQPDAPRVLDVGSGGGLPGIPLAIAFPDV---SVTMVDIVQKKTAFLT 122
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E T VI++RA A+L + + L
Sbjct: 123 QCRAELGLTNAQSHWGHVEKLADATGYGVITSRAFAELVDFVNLAGHLLAP 173
>gi|257059962|ref|YP_003137850.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
gi|256590128|gb|ACV01015.1| methyltransferase GidB [Cyanothece sp. PCC 8802]
Length = 240
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQL----HPYP 72
+N + ++ + Y + +++INL + DFW +H+ DSL + +
Sbjct: 14 NWNPNPSQQKQWDKLYHEIILANRQINLTRITEPNDFWEKHLWDSLAGILDIEIINLEQS 73
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPGI I + + V L +S KK +F++ ++++ + + R
Sbjct: 74 LKVIDIGTGAGFPGIPIGIVCPNWQ---VTLFDSTRKKINFIKILLEELSLKNCHTLIGR 130
Query: 132 IQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+E Q + D+ RA+ + EY+ P L
Sbjct: 131 AEEIGQNLSHRESYDLALIRAVGEASVCAEYTLPLLK 167
>gi|313203170|ref|YP_004041827.1| 16S rRNA m(7)g-527 methyltransferase [Paludibacter propionicigenes
WB4]
gi|312442486|gb|ADQ78842.1| 16S rRNA m(7)G-527 methyltransferase [Paludibacter propionicigenes
WB4]
Length = 206
Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ + + Y L+ +W+ KIN++S +E+ + HV SL + ++ + S +D
Sbjct: 10 SLNEIQKAQFQALYDLYFEWNAKINVISRKDIENLYEHHVLHSLAIAEIIHFQPGSTILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
+G+GGGFPGI +I LI+S KK V + R+Q+
Sbjct: 70 VGTGGGFPGIPLAILFPESN---FVLIDSIGKKIKVGTEVATAIGLKNITLKHLRVQD-- 124
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA+ L L++
Sbjct: 125 -EKGKFDFVVSRAVMPLGDLVKL 146
>gi|260429113|ref|ZP_05783090.1| 16S rRNA methyltransferase GidB [Citreicella sp. SE45]
gi|260419736|gb|EEX12989.1| 16S rRNA methyltransferase GidB [Citreicella sp. SE45]
Length = 204
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 64/147 (43%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSI 74
L +VSRET EKL++ L KWS +INLVS +T+ED W RH+ DS +VF +
Sbjct: 5 LPGLDVSRETQEKLDHLVALLAKWSPRINLVSRTTLEDSWTRHILDSAQVFSVPEVQSGH 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W D GSGGGFPG++ +I + L V L+ES +K FLR +++T ++ + RI+
Sbjct: 65 WADFGSGGGFPGLVVAILAQDLAPDLKVTLVESDQRKCVFLRTALRETKVDAQILSERIE 124
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
+ + DVISARALADL LL ++
Sbjct: 125 KILPLR--ADVISARALADLTVLLAFA 149
>gi|310817161|ref|YP_003965125.1| methyltransferase GidB [Ketogulonicigenium vulgare Y25]
gi|308755896|gb|ADO43825.1| methyltransferase GidB [Ketogulonicigenium vulgare Y25]
Length = 207
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 7/154 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-- 72
LL NVSRET L F L LKW++KINL+S+++ ++ W RH+ DS++V+ P
Sbjct: 7 LLPNVNVSRETEALLREFAALILKWTQKINLISAASEDEIWQRHILDSVQVYTALPQDFQ 66
Query: 73 -SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
W D GSGGG PGII ++ GG V ++ES +KA+FLR V+ +V +
Sbjct: 67 WKTWADFGSGGGLPGIIIAVLARET-GGQVVMVESDQRKATFLRTAVRSLGLTNARVESK 125
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
RI+ P + + DVISARALA LD L ++ P L
Sbjct: 126 RIEALPAL--SADVISARALAALDMLCAFAAPHL 157
>gi|312876171|ref|ZP_07736158.1| methyltransferase GidB [Caldicellulosiruptor lactoaceticus 6A]
gi|311796986|gb|EFR13328.1| methyltransferase GidB [Caldicellulosiruptor lactoaceticus 6A]
Length = 239
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSG 81
+ + L L+ +K NL + E+F I+H+ DSL + + S + ID+GSG
Sbjct: 22 QLFLKYMNLVLEKNKLFNLTAIEDEEEFVIKHIADSLSLLKFLEEESSSQNPVAIDIGSG 81
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQ 137
G PG+ I + SI V L +S KK +F+ + G V R +
Sbjct: 82 FGAPGLFVKIAMPSIN---VWLNDSNKKKCNFMIEAKESLGISGVNVVCERAEVLGRKED 138
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
D + ARA+ L+ L EY+ P L
Sbjct: 139 FREKFDFVFARAVDRLNVLCEYALPLLK 166
>gi|167753851|ref|ZP_02425978.1| hypothetical protein ALIPUT_02136 [Alistipes putredinis DSM 17216]
gi|167658476|gb|EDS02606.1| hypothetical protein ALIPUT_02136 [Alistipes putredinis DSM 17216]
Length = 207
Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++R + E Y L+ W+ KIN++S + ++RHV SL + ++ P+ + +D
Sbjct: 11 DLTRPQRGQFEALYALYADWNTKINVISRKDFDQLYLRHVLHSLSIAKVCPFAPGARVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G GGGFP + +I ++S KK ++ V + R + P
Sbjct: 71 VGCGGGFPSVPLAILFPEAH---FTAVDSIGKKIKVVQGVAEGLGLANLTPLCARAETLP 127
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA+ ++ T + +
Sbjct: 128 ---ERYDYVVSRAVTEMPTFVGW 147
>gi|262039021|ref|ZP_06012355.1| 16S rRNA methyltransferase GidB [Leptotrichia goodfellowii F0264]
gi|261746931|gb|EEY34436.1| 16S rRNA methyltransferase GidB [Leptotrichia goodfellowii F0264]
Length = 234
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 15 LLNTYNVSRET--LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
LL + E +EK+ F L + +K +NL + ++ +H DSL + ++
Sbjct: 11 LLEKAEIEAEKDKIEKMLQFSELLYEKNKFMNLTAIRDKKEIIEKHFIDSLLLTKIIKED 70
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
+ID+G+G GFPG++ SI E L++S KK F+ V++K + +
Sbjct: 71 EKKFIDVGTGAGFPGLVLSIYYPEKE---FLLVDSVRKKVEFINEVIEKLDLKNVKTSSE 127
Query: 131 RIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
R +E + D R +A+L +LEY P+L
Sbjct: 128 RAEELIKNKRESFDTALCRGVANLRIILEYMIPFLK 163
>gi|326799925|ref|YP_004317744.1| ribosomal RNA small subunit methyltransferase G [Sphingobacterium
sp. 21]
gi|326550689|gb|ADZ79074.1| Ribosomal RNA small subunit methyltransferase G [Sphingobacterium
sp. 21]
Length = 211
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ E+++ L+ W+ +IN++S ++ + RHV SL + +L + + +D
Sbjct: 15 ELTAIQKEQIDRLQDLYAFWNAQINVISRKDIDSLYERHVLHSLAIAKLVSFKAGATILD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I + L++S KK ++ V + R ++ P
Sbjct: 75 VGTGGGFPGIPLAILFPQTQ---FLLVDSIGKKIKVVKEVANALGLTNIQTSHSRAEQTP 131
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA+ L +PW+ K
Sbjct: 132 ---GKFDFVISRAVTRLGEF----YPWVRNK 155
>gi|146284512|ref|YP_001174665.1| 16S rRNA methyltransferase GidB [Pseudomonas stutzeri A1501]
gi|166224605|sp|A4VS72|RSMG_PSEU5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145572717|gb|ABP81823.1| glucose inhibited division protein B [Pseudomonas stutzeri A1501]
Length = 215
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGSGGGFPGIITSIQLSS 95
+KW+K NL + ++ RH+ DSL V W+D+GSGGG PG+ +I
Sbjct: 39 IKWNKAYNLTAVRDPDEMVSRHLLDSLSVVPFVAERGRNWLDVGSGGGMPGVPLAIMFPE 98
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLD 154
L++S KK FL V + +V R+++ Q T D I++RA + L+
Sbjct: 99 ---RAFTLLDSNGKKTRFLTQVKLELKLANLEVVHARVEQF-QPSTAFDGITSRAFSSLE 154
Query: 155 TLLEYSFPW 163
++
Sbjct: 155 DFASWTRHL 163
>gi|171315837|ref|ZP_02905068.1| methyltransferase GidB [Burkholderia ambifaria MEX-5]
gi|171099026|gb|EDT43811.1| methyltransferase GidB [Burkholderia ambifaria MEX-5]
Length = 228
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 QMLVDGTAALDIALTDAQRNRLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVP 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + V L + KK++F + +
Sbjct: 76 HLRDRASARVLDVGSGGGLPGIVLAIVQPDWQ---VTLNDIVQKKSAFQTQMRAELKLAN 132
Query: 126 -KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVELLRPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|167582845|ref|ZP_02375719.1| methyltransferase GidB [Burkholderia thailandensis TXDOH]
Length = 230
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 9/166 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 17 QALLSEGAEALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV 76
Query: 67 QL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSGGG PGI+ +I L + V L + KK++F +
Sbjct: 77 PHLGARGAAAALDVGSGGGLPGIVLAIALPGWQ---VTLNDIVQKKSAFQNQAKAELKLG 133
Query: 125 G-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 134 NLSVVTGRVETLRPGADVQGKFDVIVSRAFADLADFVTLARHLVAP 179
>gi|15805055|ref|NP_293740.1| 16S rRNA methyltransferase GidB [Deinococcus radiodurans R1]
gi|20177912|sp|Q9RYD6|RSMG_DEIRA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|6457673|gb|AAF09607.1|AE001865_4 gidB protein [Deinococcus radiodurans R1]
Length = 253
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 67/165 (40%), Gaps = 10/165 (6%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+LR +V+ E+ L ++++NL + T ED ++H DSL
Sbjct: 11 RELLRRGADDLGLDVAPH-EEQFARLLALLRAGNERLNLTALKTEEDIVLKHFVDSLTTL 69
Query: 67 Q--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +DLG+G GFP + +I + ++S KK F+R +
Sbjct: 70 RGGHLDGEWKTLDLGTGAGFPALPLAILRPELRLTP---LDSIRKKIDFVRETAAELGLS 126
Query: 125 GKV-FACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R + ++ + + D + ARA+A L L E + P L
Sbjct: 127 NVTPQVGRAETLGQSAEHRGSYDRVVARAVAALPVLAELALPLLR 171
>gi|78064753|ref|YP_367522.1| glucose inhibited division protein [Burkholderia sp. 383]
gi|123569641|sp|Q39KY8|RSMG_BURS3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77965498|gb|ABB06878.1| 16S rRNA m(7)G-527 methyltransferase [Burkholderia sp. 383]
Length = 228
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L ++ +L + L KW+ NL + + I+H+ DSL +
Sbjct: 16 QMLVEGTTALDLALTDAQHNQLLDYVALLGKWNAVYNLTAIRDPKQMLIQHILDSLSIVS 75
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I + + L + KK++F + +
Sbjct: 76 HLRGRASARVLDVGSGGGLPGIVLAIVEPDWQ---ITLNDIVQKKSAFQTQMRAELKLAN 132
Query: 126 -KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ ++ D+I +RA ADL ++ + +
Sbjct: 133 LSVVTGRVESLQPGVEVPEKFDMIVSRAFADLSDFVKLARHLVAP 177
>gi|225848373|ref|YP_002728536.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643342|gb|ACN98392.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 205
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L N+ +S++ +EK E + ++ LKW+K NL S E+ ++H DSL + +
Sbjct: 3 DLLEKLAKENSIELSKDKIEKFEIYLYMLLKWNKAYNLTSIRKKEEIIVKHFLDSLTLVK 62
Query: 68 LHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L D G+G GFPG+ I + LIES KK FL + ++
Sbjct: 63 LFEAKGIDLSGKKVADFGTGAGFPGVPLKIYYQD--KIDLYLIESITKKCIFLEMLSKEL 120
Query: 122 AARGKVFACRIQEAPQMITTCDVISARA 149
+ V R ++ D++ +RA
Sbjct: 121 KLKYTVLCKRAEDI---QEKFDIVVSRA 145
>gi|167564629|ref|ZP_02357545.1| methyltransferase GidB [Burkholderia oklahomensis EO147]
Length = 213
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L +S L + L KW+ NL + ++H+ DSL +
Sbjct: 1 MLSEGAEALGVALSDAQHGALLDYVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPH 60
Query: 69 H---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I L + V L + +KK++F +
Sbjct: 61 LGARGAAATALDVGSGGGLPGIVLAITLPEWQ---VTLNDIVHKKSAFQTQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRLGADVPGKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|326564042|gb|EGE14286.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis 12P80B1]
gi|326570508|gb|EGE20548.1| 16S rRNA methyltransferase GidB [Moraxella catarrhalis BC8]
Length = 225
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PS 73
++ ++ + L W K NL + + ++ ++H+ D + + + P+
Sbjct: 27 GLTITDVQNMQILRYLDGLLLWGKAYNLTAITDPDEALVKHIFDCMAIIPMLPFVTQPNK 86
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
+D+G+G G P +I +I ++ ++S KK F+R + + + A RI
Sbjct: 87 SLLDIGTGAGLPSVILAILKPDWH---IDALDSNQKKIRFIRQISSEIGLKNIMPIASRI 143
Query: 133 Q-EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q DVI++RA A L + + P L
Sbjct: 144 EHHHAQKAGAYDVITSRAFASLTDFVSLATPCLAD 178
>gi|33241078|ref|NP_876020.1| phosphoribulokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|55976488|sp|Q7VA38|RSMG_PROMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33238607|gb|AAQ00673.1| Phosphoribulokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 253
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPS 73
+ S + LE+ +L +W++KINL DFWI + DSL +
Sbjct: 19 QWEPSPQQLEQFNQLQYLLREWNQKINLTRLIEGNDFWISQILDSLWPIQDELKFQDKQI 78
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACR 131
ID+G+G G PG+ +I L LI+S +K S ++ +V++ R V R
Sbjct: 79 NIIDVGTGCGLPGLAVAIALP---RSSTTLIDSIYRKTSAVKEIVKELGLLSRVNVLTER 135
Query: 132 IQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
I+ + T D+ ARA+A L EY P+L
Sbjct: 136 IELTGQKKLHRHTFDLAIARAVAKAPVLAEYLIPFLKP 173
>gi|297193301|ref|ZP_06910699.1| methyltransferase gidB [Streptomyces pristinaespiralis ATCC 25486]
gi|197718382|gb|EDY62290.1| methyltransferase gidB [Streptomyces pristinaespiralis ATCC 25486]
Length = 246
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 8/171 (4%)
Query: 1 MKYCDSNSILRANYLLNTYNVSR----ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI 56
M+Y + + A L +R E + + L K L+ V W
Sbjct: 1 MRYGRTVPVTEAAQLPQAPEAARKVFGEYFPEAVRYAELLADAGVKRGLIGPREVPRLWE 60
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL+
Sbjct: 61 RHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRPDLK---ITLLEPLLRRTNFLQE 117
Query: 117 VVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
VV+ V R +E + V++ARA+A LD L + P L
Sbjct: 118 VVELLGLDHVTVVRGRAEEVLGKVPPVHVVTARAVAPLDRLAGWGVPLLRP 168
>gi|188994960|ref|YP_001929212.1| 16S rRNA methyltransferase GidB [Porphyromonas gingivalis ATCC
33277]
gi|188594640|dbj|BAG33615.1| glucose-inhibited division protein B [Porphyromonas gingivalis ATCC
33277]
Length = 224
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+ E L+ W+ IN++S +++ ++ HV SL + ++ + + +D
Sbjct: 27 HLSERQREQFEQMGGLYTHWNALINVISRKDIDNLYLHHVLHSLGIARMLNFKPGTSVLD 86
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
LG+GGGFPGI +I + L++S KK V + + CR +
Sbjct: 87 LGTGGGFPGIPLAILFPQV---SFLLVDSIGKKVKVASAVAEALGLDNVRTMHCRAESIG 143
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
D + +RA+ L L + + ++
Sbjct: 144 ---EKFDFVVSRAVMKLSELAKICRKLIRRE 171
>gi|260890746|ref|ZP_05902009.1| 16S rRNA methyltransferase GidB [Leptotrichia hofstadii F0254]
gi|260859299|gb|EEX73799.1| 16S rRNA methyltransferase GidB [Leptotrichia hofstadii F0254]
Length = 240
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIW 75
+ V E + ++ F L ++ +NL + + +H DSL + ++ +
Sbjct: 21 SEIKVPDEKITQMLKFLELLYNKNQIMNLTAIREKKGMLEKHFIDSLLLTKVINDDEKSF 80
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQE 134
ID+G+G GFPG++ +I + L++S KK F+ V+++ + + R +E
Sbjct: 81 IDVGTGAGFPGLVLAIYYPEKK---FLLVDSVRKKIEFINEVIKELNLQNVTTSFERAEE 137
Query: 135 A-PQMITTCDVISARALADLDTLLEYSFPWLY 165
DV R +A+L +LEY P++
Sbjct: 138 LIKDRRECFDVALCRGVANLRIILEYMIPFIK 169
>gi|189040871|sp|A4SCT8|RSMG_PROVI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 221
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
++ E + L + + W+ K+NL+S IRHV SL +
Sbjct: 18 EGIQITDEQHQLLVRYAQMLESWNTKVNLISRKEDAPVLIRHVFHSLLPSLVHNFRDGET 77
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
+DLG+GGG PGI +I ++ L++S KK + ++++ + R++
Sbjct: 78 VLDLGTGGGLPGIPLAIMYPQVQ---FLLVDSTGKKITACSAMIEELGLTNARAMHTRVE 134
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + I +R +A L L Y+ P L +
Sbjct: 135 ELKGLA--FNTILSRQVAPLKELSRYAAPLLKK 165
>gi|325297809|ref|YP_004257726.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
salanitronis DSM 18170]
gi|324317362|gb|ADY35253.1| Ribosomal RNA small subunit methyltransferase G [Bacteroides
salanitronis DSM 18170]
Length = 210
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 12 ANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
A+ + N + +++ E+ + L+ W+ KIN++S + + + H+ SL + ++
Sbjct: 4 ADIIQNYFPDLTDTQKEQFAALWDLYTYWNSKINVISRKDIGNLYEHHILHSLGIAKVIH 63
Query: 71 Y--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
+ + +DLG+GGGFPGI +I + +L++S KK V +
Sbjct: 64 FRPGTEVMDLGTGGGFPGIPLAILFPEV---SFHLVDSIGKKVKVATEVANAIELKNVTA 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLE 158
CR +E +M D + +RA+ L L++
Sbjct: 121 RHCRAEEEKRM---FDFVVSRAVMPLPDLIK 148
>gi|260592447|ref|ZP_05857905.1| 16S rRNA methyltransferase GidB [Prevotella veroralis F0319]
gi|260535493|gb|EEX18110.1| 16S rRNA methyltransferase GidB [Prevotella veroralis F0319]
Length = 207
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N++ E E+ L+ +W+ KIN++S +++ + HV SL + + + + +D
Sbjct: 11 NLTAEQEEQFNALNALYHEWNAKINVISRKDIDNLYEHHVLHSLAIAKFIKFCEGTNVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPGI +I LI+ KK + V + A E +
Sbjct: 71 FGTGGGFPGIPLAILFPEAN---FKLIDGTGKKVRVAQEVATAIGLTNILPAHLRGE--E 125
Query: 138 MITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 126 EKGKFDFIVSRAVMPLPDLMK 146
>gi|302531352|ref|ZP_07283694.1| 16S rRNA methyltransferase GidB [Streptomyces sp. AA4]
gi|302440247|gb|EFL12063.1| 16S rRNA methyltransferase GidB [Streptomyces sp. AA4]
Length = 229
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +E+ + L + L+ VE W RHV +S + + P + +D+GSG G
Sbjct: 23 ERVEQAAGYVELLATHGVERGLIGPREVERLWERHVLNSAVIGEQIPSEARVVDVGSGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITT 141
PG+ +I ++ + L+E ++ +L V +K + R +E + +
Sbjct: 83 LPGVPLAIARPDLD---IVLLEPMARRVDWLAEVAEKLELPITIVRGRAEERSVREQLGG 139
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A L L + P + +
Sbjct: 140 ADVVTARAVAPLARLAGWCLPLVRPE 165
>gi|83950773|ref|ZP_00959506.1| glucose-inhibited division protein B [Roseovarius nubinhibens ISM]
gi|83838672|gb|EAP77968.1| glucose-inhibited division protein B [Roseovarius nubinhibens ISM]
Length = 200
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/147 (41%), Positives = 89/147 (60%), Gaps = 4/147 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSI 74
++ NVSRET E+LE + L KW+ KINLV+ +++ + RH EDS ++ P S
Sbjct: 1 MSLANVSRETEERLEIYAALLEKWNPKINLVARASLNEAGRRHFEDSAQIMLHAPTQISH 60
Query: 75 WIDLGSGGGFPGIITSIQLSSIE-GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+D+GSGGGFPG++ +I G LIES +K +FLR V ++T+ V + RI+
Sbjct: 61 WVDIGSGGGFPGLVAAILAQESHKGAKFTLIESDQRKCAFLRSVSRETSVPVTVLSERIE 120
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
+A DV+SARALA L LL ++
Sbjct: 121 QAA--PQEADVLSARALAPLTDLLGFA 145
>gi|220936470|ref|YP_002515369.1| glucose-inhibited division protein B [Thioalkalivibrio sp.
HL-EbGR7]
gi|219997780|gb|ACL74382.1| glucose-inhibited division protein B [Thioalkalivibrio sp.
HL-EbGR7]
Length = 210
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 6/165 (3%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M D + L + + L + L +W+K NL + + H+
Sbjct: 1 MTALDEAARAELARGLEALGLPANLGQPLGAYLELLARWNKAYNLTAVTEPRQMVTHHLL 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL V S D+GSG G PGI +I + V L+++ KK F + + +
Sbjct: 61 DSLAVLPWI-RGSRIADIGSGAGLPGIPLAIARPEL---TVVLVDTVGKKVRFQKQAILE 116
Query: 121 TAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R++ + D + +RA A + + +
Sbjct: 117 LGLVNASAVHARVE-NYRPEEPFDTVISRAFAATADFVALAGHLV 160
>gi|288800185|ref|ZP_06405644.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333433|gb|EFC71912.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 299 str.
F0039]
Length = 206
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
N +L + +++ + +E+ + L+ W++KIN++S + + + HV SL + + +
Sbjct: 2 NEILEYFPHLTDKQIEQFKALQALYEDWNQKINVISRKDISNLYSHHVLHSLAIAKAINF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ +D G+GGGFPGI +I + + LI+ KK V++ V
Sbjct: 62 KDGTTIMDFGTGGGFPGIPLAIMFPNCK---FKLIDGTGKKIMVANEVIKAIGITNVVAE 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
R +E + I +RA+ L L+
Sbjct: 119 HIRGEE---EKGKYNFIVSRAVMPLPDLI 144
>gi|297539953|ref|YP_003675722.1| methyltransferase GidB [Methylotenera sp. 301]
gi|297259300|gb|ADI31145.1| methyltransferase GidB [Methylotenera sp. 301]
Length = 217
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S L++ L + E KL + L KW+K NL + + H+ DSL V
Sbjct: 8 QSKLQSGLLEMDLQIDAEKQAKLIAYLLLIDKWNKVHNLTAIRDPLEMVTLHLLDSLSVL 67
Query: 67 QLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
P +D+G+G G P I +I L ++ V I+S KK SF+R V +
Sbjct: 68 PHVQALTPKCLLDVGAGAGLPSIPLAICLPELQ---VTAIDSVAKKTSFMRQVKGELGLS 124
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+V R++ + + DVI +RA +++ ++ + L
Sbjct: 125 NFQVEVGRVEALKKDV-KFDVIISRAFSEIGLFVKLTKHLLA 165
>gi|238899344|ref|YP_002925027.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229467105|gb|ACQ68879.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 211
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 11 RANYLLN--TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
N LL+ N+S E +K+ + L +W+K N S ++ I+HV DS+ V
Sbjct: 4 ELNILLSIAKINLSEEQKQKIISYIELLCQWNKTYNFTSVHDPKEMLIKHVLDSIIVAPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+ID+G+G G PG++ +I L L++S K+ FLR V Q +
Sbjct: 64 LK-GRKFIDVGTGPGLPGLLLAIVLPDSH---FTLLDSIGKRICFLRQVQQSLRLTNIQP 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ D + +RA A L +L + +
Sbjct: 120 IQSRVESFFPSK-RFDGVISRAFASLKNMLSCCEHLVDK 157
>gi|148361202|ref|YP_001252409.1| glucose inhibited division protein B [Legionella pneumophila str.
Corby]
gi|296108538|ref|YP_003620239.1| glucose inhibited division protein B [Legionella pneumophila
2300/99 Alcoy]
gi|166224596|sp|A5II63|RSMG_LEGPC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148282975|gb|ABQ57063.1| glucose inhibited division protein B [Legionella pneumophila str.
Corby]
gi|295650440|gb|ADG26287.1| glucose inhibited division protein B [Legionella pneumophila
2300/99 Alcoy]
Length = 208
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIK-GNHIIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S KK SFL V ++ + + R++ D + +RA + L+ +
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVE-NYHPNQGFDTVISRAFSSLEQM 150
Query: 157 LEYSFPWLYQ 166
++++ + Q
Sbjct: 151 IKWTEHLVAQ 160
>gi|241766012|ref|ZP_04763933.1| methyltransferase GidB [Acidovorax delafieldii 2AN]
gi|241364011|gb|EER59267.1| methyltransferase GidB [Acidovorax delafieldii 2AN]
Length = 225
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L A + +++++ + +L F L KW+K NL + ++ H+ DSL
Sbjct: 11 HQQLEAGAQALSLDLNQDQITRLMEFLALLQKWNKVYNLTAVRNPQEMVTHHLLDSLAAV 70
Query: 67 -----------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
Q +D+GSGGG PG++ +I ++ V+ +++ KKA+F++
Sbjct: 71 VPLRRHVATLGQGGAQAVRLLDVGSGGGLPGVVFAICCPGVD---VSCVDTVGKKAAFIQ 127
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R + T D+IS RA A L + +S
Sbjct: 128 QAAVALKLRN--LHGVHARVETLTTPFDIISCRAFASLPDFVAWS 170
>gi|145219090|ref|YP_001129799.1| glucose-inhibited division protein B [Prosthecochloris vibrioformis
DSM 265]
gi|145205254|gb|ABP36297.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium phaeovibrioides
DSM 265]
Length = 248
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL--RVFQLHPYPSI 74
++ E + L + + W+ K+NL+S IRHV SL +
Sbjct: 45 EGIQITDEQHQLLVRYAQMLESWNTKVNLISRKEDAPVLIRHVFHSLLPSLVHNFRDGET 104
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
+DLG+GGG PGI +I ++ L++S KK + ++++ + R++
Sbjct: 105 VLDLGTGGGLPGIPLAIMYPQVQ---FLLVDSTGKKITACSAMIEELGLTNARAMHTRVE 161
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + + I +R +A L L Y+ P L +
Sbjct: 162 ELKGLA--FNTILSRQVAPLKELSRYAAPLLKK 192
>gi|34541002|ref|NP_905481.1| 16S rRNA methyltransferase GidB [Porphyromonas gingivalis W83]
gi|55976476|sp|Q7MV10|RSMG_PORGI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34397317|gb|AAQ66380.1| glucose-inhibited division protein B [Porphyromonas gingivalis W83]
Length = 221
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E+ E L+ W+ IN++S +++ ++ HV SL + ++ + + +D
Sbjct: 24 HLSERQREQFEQMGGLYTHWNALINVISRKDIDNLYLHHVLHSLGIARMLNFKPGTSVLD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
LG+GGGFPGI +I + L++S KK V + + CR +
Sbjct: 84 LGTGGGFPGIPLAILFPQV---SFLLVDSIGKKVKVASAVAEALGLDNVRTMHCRAESIG 140
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
D I +RA+ L L + + ++
Sbjct: 141 ---EKFDFIVSRAVMKLSELAKICRKLIRRE 168
>gi|213962694|ref|ZP_03390955.1| 16S rRNA methyltransferase GidB [Capnocytophaga sputigena Capno]
gi|213954689|gb|EEB66010.1| 16S rRNA methyltransferase GidB [Capnocytophaga sputigena Capno]
Length = 205
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S + ++ L+ KW+ +IN++S ++DF+ RHV SL + + + + +D
Sbjct: 10 SLSEQQQQQFTQLKTLYEKWNAQINVISRKDIDDFYERHVLHSLAIAKCIQFRDGTQILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
+G+GGGFPGI +I + + L++S KK ++ VV+ R +E
Sbjct: 70 VGTGGGFPGIPLAIMFPNCQ---FTLVDSIGKKIKVVQEVVKALKLTNVTAMQIRAEELK 126
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
T D + +RA+ + + PW+ K
Sbjct: 127 D---TYDFVVSRAVTQMKDFV----PWVKGK 150
>gi|54298882|ref|YP_125251.1| 16S rRNA methyltransferase GidB [Legionella pneumophila str. Paris]
gi|81601621|sp|Q5X0Z7|RSMG_LEGPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53752667|emb|CAH14102.1| hypothetical protein lpp2949 [Legionella pneumophila str. Paris]
Length = 208
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIK-GNHIIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S KK SFL V ++ + + R++ D + +RA + L+ +
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVE-NYHPNQGFDTVISRAFSSLEQM 150
Query: 157 LEYSFPWLYQ 166
++++ + Q
Sbjct: 151 IKWTEHLVAQ 160
>gi|319790745|ref|YP_004152385.1| methyltransferase gidb [Variovorax paradoxus EPS]
gi|315593208|gb|ADU34274.1| methyltransferase GidB [Variovorax paradoxus EPS]
Length = 213
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF- 66
LRA +S E+L + L LKW+K NL + H+ DSL V
Sbjct: 6 DTLRAGAGALGVTLSDRQGEQLLAYGTLMLKWNKVYNLTAVRDPAGVMTHHLLDSLAVIA 65
Query: 67 ---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +P +D+GSG G PG+I +I I+ V+ +++ KKA+F++ V +
Sbjct: 66 PLQRQYPEQGRLLDVGSGAGLPGVIIAIMRPDID---VSCLDAVAKKAAFVQQVAVELEL 122
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
+ R++ + + +VIS+RA A L
Sbjct: 123 PNLRGLHARVE---LLEGSYNVISSRAFASLPDF 153
>gi|187930587|ref|YP_001901074.1| 16S rRNA methyltransferase GidB [Ralstonia pickettii 12J]
gi|187727477|gb|ACD28642.1| methyltransferase GidB [Ralstonia pickettii 12J]
Length = 222
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ + L A ++ +++L + L KW++ NL + D H+ DSL
Sbjct: 6 TDARAELEAGARALGLSLDDAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 65
Query: 64 RVF--------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ P +D+GSGGG PGI +I + V +++ KK +FL
Sbjct: 66 SAVSRIAGLARRAQPDAPRVLDVGSGGGLPGIPLAIAFPDV---SVTMVDIVQKKTAFLT 122
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E T VI++RA A+L + + L
Sbjct: 123 QCRAELGLANAQSHWGHVEKLADATGYGVITSRAFAELVDFVNLAGHLLAP 173
>gi|77166530|ref|YP_345055.1| glucose inhibited division protein [Nitrosococcus oceani ATCC
19707]
gi|254435732|ref|ZP_05049239.1| methyltransferase GidB [Nitrosococcus oceani AFC27]
gi|123593189|sp|Q3J6M1|RSMG_NITOC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76884844|gb|ABA59525.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosococcus oceani ATCC
19707]
gi|207088843|gb|EDZ66115.1| methyltransferase GidB [Nitrosococcus oceani AFC27]
Length = 214
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 4/159 (2%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL LL + + ++ L + L KW++ NL + ++ +HV DSL +
Sbjct: 8 ILEKGLLLLGVELDQSQVKVLLAYLRLLEKWNQHYNLTAIKNSKEMISKHVLDSLSIESY 67
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+GSG G PGI +I E L++S KK FL +
Sbjct: 68 L-EGRRILDVGSGAGLPGIPLAIARPGCE---FVLLDSNAKKTRFLFQASVELGLPNISV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
E + D I ARA A L + + +
Sbjct: 124 VSERVEVYRPSHLFDTIIARAFAKLVDFVAQAEHLCKPR 162
>gi|229593491|ref|YP_002875610.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens SBW25]
gi|229365357|emb|CAY53741.1| glucose inhibited division protein B methyltransferase [Pseudomonas
fluorescens SBW25]
Length = 214
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +++ E L + L +KW+K NL + ++ RH+ DSL V
Sbjct: 13 LSTGARQLGVDLTPAQHELLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMPFI 72
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
W+D+GSGGG PGI +I + V ++S KK FL V + +V
Sbjct: 73 -ENGRWLDVGSGGGMPGIPLAILFPESQ---VTCLDSNGKKTRFLTQVKLELKLDNLQVI 128
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ + I +RA + ++ ++
Sbjct: 129 HSRVE-GFTPEQPFNGIVSRAFSSMENFSNWTRHL 162
>gi|222530699|ref|YP_002574581.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
gi|254766875|sp|B9MQF1|RSMG_ANATD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|222457546|gb|ACM61808.1| methyltransferase GidB [Caldicellulosiruptor bescii DSM 6725]
Length = 238
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGG 83
L + L L+ +K NL + E+F I+H+ DSL + + + + ID+GSG G
Sbjct: 23 LIKYMNLVLEKNKLFNLTAIENEEEFVIKHIADSLSLLKFIEQENSNQNPVAIDIGSGFG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQMI 139
PG+ I + S+ V L +S KK F+ + G V R + +
Sbjct: 83 APGLFVKIAMPSVN---VFLNDSNKKKCKFMNEAKESLGISGVNVVCERAEVLGRKEEFR 139
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D + ARA+ L+ L EY+ P L
Sbjct: 140 EKFDFVFARAVDRLNVLCEYAIPLLK 165
>gi|291446138|ref|ZP_06585528.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
gi|291349085|gb|EFE75989.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
Length = 246
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 8/171 (4%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKL----EYFYFLFLKWSKKINLVSSSTVEDFWI 56
M+Y + + A L +RE +L + L K L+ V W
Sbjct: 1 MRYGRTVPVTEAAELPQAPAEAREVFGELFPEAVRYAELLADAGVKRGLIGPREVPRLWE 60
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL+
Sbjct: 61 RHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRPDLK---ITLLEPLLRRTNFLQE 117
Query: 117 VVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
VV+ V R +E + V++ARA+A LD L + P L
Sbjct: 118 VVELLGLDHVTVVRGRAEEVLGTLQPVQVVTARAVAPLDRLAGWGVPLLKP 168
>gi|104784444|ref|YP_610942.1| 16S rRNA methyltransferase GidB [Pseudomonas entomophila L48]
gi|122401170|sp|Q1I2H7|RSMG_PSEE4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|95113431|emb|CAK18159.1| glucose-inhibited division protein B [Pseudomonas entomophila L48]
Length = 216
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L +S + E L + L +KW+K NL + ++ RH+ DSL V
Sbjct: 13 LSTGARQLGVELSAQQHELLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMPFI 72
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
H W+D+GSGGG PGI +I + V +++S KK FL V + V
Sbjct: 73 HNDTQRWLDVGSGGGMPGIPLAILHPHKQ---VTVLDSNGKKTRFLTQVKMELKLDNLTV 129
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E Q I +RA + ++ ++
Sbjct: 130 IHSRVEEV-QPEQPFCGIISRAFSSMENFTNWTRHL 164
>gi|119475230|ref|ZP_01615583.1| glucose-inhibited division protein B [marine gamma proteobacterium
HTCC2143]
gi|119451433|gb|EAW32666.1| glucose-inhibited division protein B [marine gamma proteobacterium
HTCC2143]
Length = 215
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
SIL + V + L ++ L +KW+K NL + + RH+ DSL V
Sbjct: 6 RSILEDGINELSLTVPSAKISLLLAYHQLLVKWNKAYNLTAVRNSREMISRHLLDSLTVA 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +ID+G+G G PGI+ +I + +L++S KK FL V +
Sbjct: 66 PYL-HGNRFIDIGAGAGLPGIVLAILFPERQ---FDLLDSNGKKTRFLFQVKTELGLGNI 121
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E + T + I +RA A L ++ S L
Sbjct: 122 TIHHSRVEQLSVEHTYEGILSRAFASLADMVNCSGQLLAD 161
>gi|84501193|ref|ZP_00999398.1| glucose-inhibited division protein B [Oceanicola batsensis
HTCC2597]
gi|84390484|gb|EAQ02972.1| glucose-inhibited division protein B [Oceanicola batsensis
HTCC2597]
Length = 201
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 66/143 (46%), Positives = 92/143 (64%), Gaps = 4/143 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRETLE+LE F L +W+ +INLVS ST++D W RHV DS++VF+ +W+D+
Sbjct: 6 DVSRETLERLEIFVRLLRQWNPRINLVSKSTLDDAWNRHVADSVQVFEASRQASGLWVDM 65
Query: 79 GSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I L V LIES +K +FLR V ++ + A RI++ P
Sbjct: 66 GSGGGFPGLVIAILALERAPALQVKLIESDQRKCAFLRTVAREAGVSVSIKARRIEDEP- 124
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ VISARALA L LL++S
Sbjct: 125 -PSQASVISARALAPLTDLLQFS 146
>gi|163787556|ref|ZP_02182003.1| glucose-inhibited division protein B [Flavobacteriales bacterium
ALC-1]
gi|159877444|gb|EDP71501.1| glucose-inhibited division protein B [Flavobacteriales bacterium
ALC-1]
Length = 208
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ + + E L+ W+ KIN+VS +++ ++RHV SL + ++ + S +D
Sbjct: 10 DLTETQINQFEALEGLYKDWNAKINVVSRKDIDELYLRHVLHSLAIAKVIQFKDNSSILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPG+ +I + + +L++S NKK + V + R++
Sbjct: 70 VGTGGGFPGVPLAILFPNCK---FHLVDSINKKLKVIDAVCEAIELTNVKTTHSRVE--- 123
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ T D I +RA+ + ++
Sbjct: 124 AIDETFDFIVSRAVTAMPEFTKW 146
>gi|282880735|ref|ZP_06289436.1| 16S rRNA methyltransferase GidB [Prevotella timonensis CRIS 5C-B1]
gi|281305397|gb|EFA97456.1| 16S rRNA methyltransferase GidB [Prevotella timonensis CRIS 5C-B1]
Length = 206
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ ++L L+ W+ KIN++S ++ + HV SL + + + + +D
Sbjct: 10 SLTETQTKQLSMLQDLYNDWNAKINVISRKDIQQLYEHHVLHSLAIAKFISFKSGTNILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
G+GGGFPGI +I LI+ KK + V + + R +E
Sbjct: 70 FGTGGGFPGIPLAILFPECR---FTLIDGTGKKVRVAQEVATTIGLKNVETKHIRGEE-- 124
Query: 137 QMITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 125 -EKGKYDFVVSRAVMPLPELIK 145
>gi|294788313|ref|ZP_06753556.1| 16S rRNA methyltransferase GidB [Simonsiella muelleri ATCC 29453]
gi|294483744|gb|EFG31428.1| 16S rRNA methyltransferase GidB [Simonsiella muelleri ATCC 29453]
Length = 210
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 8/167 (4%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y L++ +++ L + L KW+ NL + H+
Sbjct: 1 MSYLKEQ--LQSGLNAMNLDLTMPQQLLLLEYVALLKKWNSTYNLTALRDENTMISHHLL 58
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + +D+GSGGG PGI T+I + + L++S KK +FL+ V +
Sbjct: 59 DSLTLLPYVANAQTLMDVGSGGGMPGIPTAICRPDLH---ITLLDSNTKKTTFLQQAVIE 115
Query: 121 TAARGKVFA-CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ A R++ DV+++RA A+L + + L +
Sbjct: 116 LGLKNVTVASGRVE--AMHDKKVDVVTSRAFAELHDFIALTKHLLNE 160
>gi|54295715|ref|YP_128130.1| hypothetical protein lpl2803 [Legionella pneumophila str. Lens]
gi|81601155|sp|Q5WSS3|RSMG_LEGPL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53755547|emb|CAH17046.1| hypothetical protein lpl2803 [Legionella pneumophila str. Lens]
Length = 208
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIK-GNHIIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S KK SFL V ++ + + R++ D + +RA + L+ +
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVE-NYHPNQGFDTVISRAFSSLEQM 150
Query: 157 LEYSFPWLYQ 166
++++ + Q
Sbjct: 151 IKWTQHLVAQ 160
>gi|281420102|ref|ZP_06251101.1| 16S rRNA methyltransferase GidB [Prevotella copri DSM 18205]
gi|281405902|gb|EFB36582.1| 16S rRNA methyltransferase GidB [Prevotella copri DSM 18205]
Length = 253
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N++ E ++ E L+ W+ KIN++S +++ + HV SL + + + + +D
Sbjct: 56 NLTEEQKKQFEALDALYRDWNSKINVISRKDIDNLYEHHVLHSLAIAKAIHFRPGTEILD 115
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
G GGGFPGI +I + LI+ KK V + K R ++
Sbjct: 116 FGCGGGFPGIPLAILFPECK---FKLIDGTGKKIRVCNEVATAINLQNLKAEHLRGED-- 170
Query: 137 QMITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 171 -EKGKYDFVVSRAVMQLPDLMK 191
>gi|307611763|emb|CBX01471.1| hypothetical protein LPW_31591 [Legionella pneumophila 130b]
Length = 208
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIK-GNHIIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S KK SFL V ++ + + R++ D + +RA + L+ +
Sbjct: 95 ---FVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVE-NYHPNQGFDTVISRAFSSLEQM 150
Query: 157 LEYSFPWLYQ 166
++++ + Q
Sbjct: 151 IKWTQHLVAQ 160
>gi|37520277|ref|NP_923654.1| 16S rRNA methyltransferase GidB [Gloeobacter violaceus PCC 7421]
gi|55976480|sp|Q7NMQ7|RSMG_GLOVI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|35211270|dbj|BAC88649.1| glucose inhibited division protein B [Gloeobacter violaceus PCC
7421]
Length = 251
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 9/160 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
A + + E Y L L + ++NL + E+FW +H+ DSLR
Sbjct: 5 ALWQDLGWQPDTLQARSFERLYALVLAGNTRLNLTRITGREEFWEKHLFDSLRGLAAFQD 64
Query: 72 PS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
ID+G+G GFPG+ +I V L++S KK +F+ +Q +
Sbjct: 65 QKEPSLIDIGTGAGFPGLPIAIAHPDW---YVVLVDSVRKKIAFVLSTIQALGLTNAQAL 121
Query: 129 ACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ + + D+ RA+A + EY+ P++
Sbjct: 122 TGRAEDLAHRREHRESYDLAVLRAVAQANVCAEYALPFVK 161
>gi|300866835|ref|ZP_07111513.1| Ribosomal RNA small subunit methyltransferase G [Oscillatoria sp.
PCC 6506]
gi|300335185|emb|CBN56673.1| Ribosomal RNA small subunit methyltransferase G [Oscillatoria sp.
PCC 6506]
Length = 236
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPS--- 73
++ + E + + Y L + +K +NL + +FW +H+ DSLR + L +
Sbjct: 19 SWQPNDEQQRQFQQLYELIIDGNKHLNLTRITEPLEFWEKHLWDSLRGIAPLLSPNNLGA 78
Query: 74 ----------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
ID+G+G GFPG+ +I L + V L++ KK SFL +V +
Sbjct: 79 IDELPLKPMQKVIDIGTGAGFPGLPIAIALPN---FTVTLLDGTRKKISFLETLVPELGI 135
Query: 124 RGKV-FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V R +E PQ D+ RA+A +YS P L
Sbjct: 136 KNAVPLIGRSEEIAHQPQHRQFYDLAFLRAVASASICAKYSLPLLKP 182
>gi|309780415|ref|ZP_07675165.1| 16S rRNA methyltransferase GidB [Ralstonia sp. 5_7_47FAA]
gi|308920808|gb|EFP66455.1| 16S rRNA methyltransferase GidB [Ralstonia sp. 5_7_47FAA]
Length = 222
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D+ + L A ++ +++L + L KW++ NL + D H+ DSL
Sbjct: 6 TDARAELEAGARALGLSLDEAQVDRLLAYQGLLAKWNRVYNLTAIRDAGDMLTHHLLDSL 65
Query: 64 RVF--------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ P +D+GSGGG PGI +I + V +++ KK +FL
Sbjct: 66 SAVSRIAELARRAQPDAPRVLDVGSGGGLPGIPLAIAFPDV---SVTMVDIVQKKTAFLT 122
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E T VI++RA A+L + + L
Sbjct: 123 QCRAELGLANAQSHWGHVEKLADATGYGVITSRAFAELVDFVNLAGHLLAP 173
>gi|319760788|ref|YP_004124725.1| methyltransferase gidb [Alicycliphilus denitrificans BC]
gi|330822708|ref|YP_004386011.1| methyltransferase GidB [Alicycliphilus denitrificans K601]
gi|317115349|gb|ADU97837.1| methyltransferase GidB [Alicycliphilus denitrificans BC]
gi|329308080|gb|AEB82495.1| methyltransferase GidB [Alicycliphilus denitrificans K601]
Length = 215
Score = 147 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 13/165 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR----- 64
LR +++ E + +L F L KW+K NL + ++ H+ DSL
Sbjct: 7 LRQGVQALGLDLTEEQIARLLDFLALLQKWNKVYNLTAVRDPQEMLTHHLLDSLAAVAPL 66
Query: 65 ---VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ Q +D+GSGGG PG++ +I ++ V+ +++ KKA+F++
Sbjct: 67 RRHLAQQGGAGRRLLDVGSGGGLPGVVFAICCPDLD---VSCVDTVAKKAAFIQQAAAAL 123
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + DV+S RA A L + +S L
Sbjct: 124 GLRN--LHGIHARVETLAGPFDVVSCRAFASLPDFVNWSRQVLAP 166
>gi|119776786|ref|YP_929526.1| 16S rRNA methyltransferase GidB [Shewanella amazonensis SB2B]
gi|166224610|sp|A1SBV0|RSMG_SHEAM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119769286|gb|ABM01857.1| glucose-inhibited division protein B [Shewanella amazonensis SB2B]
Length = 206
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + V + ++L F L KW+K NL S RH+ DSL V H
Sbjct: 6 LSQDLAKAGLQVDAQQQQQLLAFVALLDKWNKAYNLTSVREPAQMLTRHILDSL-VVSPH 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +ID+G+G G PGI +I E L++S K+ F + V + +
Sbjct: 65 LVGSRFIDVGTGPGLPGIPLAIINPDKE---FVLLDSLGKRIRFQKQVAVELGLKNISSV 121
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E Q D + +RA A + +L +
Sbjct: 122 ESRVELYQPEQGFDGVLSRAFASVGDMLSWCHHL 155
>gi|325983681|ref|YP_004296083.1| methyltransferase GidB [Nitrosomonas sp. AL212]
gi|325533200|gb|ADZ27921.1| methyltransferase GidB [Nitrosomonas sp. AL212]
Length = 224
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 22 SRETLEK-LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
E L K +E + L KW+K NL + V++ +HV DSL V P + ID+G+
Sbjct: 21 PEEQLAKNIERYLVLIEKWNKVHNLTAIRNVQEMLTQHVMDSLVVLPHIQGPQV-IDVGT 79
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PGI ++ V L+ES KK +FL+ V + + A + E
Sbjct: 80 GAGLPGIPIALAKPDWH---VTLVESNQKKIAFLQQVKIELGLKNVDVAAKRIEDLPADK 136
Query: 141 TCDVISARALADLDTLLEYSFPW 163
D I +RA ++L + + W
Sbjct: 137 KADTIISRAFSELGEFIALTRQW 159
>gi|119947333|ref|YP_945013.1| methyltransferase GidB [Psychromonas ingrahamii 37]
gi|189040711|sp|A1T0Z9|RSMG_PSYIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119865937|gb|ABM05414.1| methyltransferase GidB [Psychromonas ingrahamii 37]
Length = 207
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQL 93
L KW+K NL S E ++H+ DS+ V +ID+G+G G PG+ +I
Sbjct: 31 ELLNKWNKAYNLTSVRDPEQMLVKHIMDSIVVSPYL-IGERFIDVGTGPGLPGLPLAILN 89
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVISARALAD 152
+ L++S K+ F+R + + + R++E Q DV+ +RA A
Sbjct: 90 PDKQ---FVLLDSLGKRLRFIRQALLELGLKNVTAVQSRVEE-YQPEHKFDVVLSRAFAS 145
Query: 153 LDTLLEYSFPWLYQK 167
L +L + +++
Sbjct: 146 LHDMLYWCKHLPHEE 160
>gi|254466952|ref|ZP_05080363.1| methyltransferase GidB [Rhodobacterales bacterium Y4I]
gi|206687860|gb|EDZ48342.1| methyltransferase GidB [Rhodobacterales bacterium Y4I]
Length = 205
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 69/153 (45%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
+L NVSRETL +LE F + KW+ KINLVS S++E W RH+ DS++VF+ P
Sbjct: 5 RILEELNVSRETLARLEAFEQVIKKWNPKINLVSKSSLELLWSRHIADSVQVFRCVDAPD 64
Query: 74 IWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
W+D+GSGGGFPG+I SI + LIES +K++FLR ++ A+ V + RI
Sbjct: 65 HWVDIGSGGGFPGLIVSILAADEAPEMKTTLIESDQRKSAFLRTAARECGAKVTVISKRI 124
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ A +V+SARALADL LLE+S L
Sbjct: 125 EHAD--PQNAEVLSARALADLSLLLEFSERHLA 155
>gi|83594955|ref|YP_428707.1| glucose inhibited division protein [Rhodospirillum rubrum ATCC
11170]
gi|123525452|sp|Q2RN75|RSMG_RHORT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83577869|gb|ABC24420.1| Glucose inhibited division protein [Rhodospirillum rubrum ATCC
11170]
Length = 201
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 7/153 (4%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
VSRET+E+LE + + KW ++INLV +T++D W RH DS ++ L P P
Sbjct: 4 EAFAADVPVSRETVERLEAYLAVLEKWQRRINLVGKTTLDDPWRRHFLDSAQLLALLPTP 63
Query: 73 SI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +DLGSG GFPG++ +I + V+L+E+ +K++FL + T R + R
Sbjct: 64 TRVLLDLGSGAGFPGLVLAI----LGVPEVHLVEADGRKSAFLIEAARITNTRIVLHTLR 119
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
++ P + DV++ARA A L +LE + P+L
Sbjct: 120 LEALP--VFPVDVVTARAFAPLARILEGAAPFL 150
>gi|77461957|ref|YP_351464.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens Pf0-1]
gi|123602668|sp|Q3K431|RSMG_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77385960|gb|ABA77473.1| 16S rRNA m(7)G-527 methyltransferase [Pseudomonas fluorescens
Pf0-1]
Length = 214
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
N++ E L + L +KW++ NL + ++ RH+ DSL V W+D
Sbjct: 21 GVNLTGTQHELLLGYLALLIKWNQAYNLTAVRDPDEMVSRHLLDSLSVMSFI-ENGRWLD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PGI +I + V ++S KK FL V + +V R++ A
Sbjct: 80 VGSGGGMPGIPLAILYPDSQ---VTCLDSNGKKTRFLTQVKLELKLDNLQVIHSRVE-AF 135
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
Q + I +RA + ++ ++
Sbjct: 136 QPAQPFNGIISRAFSSMENFTNWTRHL 162
>gi|52843085|ref|YP_096884.1| 16S rRNA methyltransferase GidB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|81603158|sp|Q5ZRJ1|RSMG_LEGPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52630196|gb|AAU28937.1| glucose inhibited division protein B [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 208
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL + +E +H+ DSL + + ID+G+G G PGI +I ++
Sbjct: 36 KWNKTYNLTAIRDIETMVSKHLFDSLAILPWIK-GNHIIDVGTGPGLPGIPLAIAKPDLQ 94
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S KK FL V ++ + + R++ D + +RA + L+ +
Sbjct: 95 ---FVLLDSNGKKIRFLNEVKRQLNIKNIEPIQIRVE-NYHPNQGFDTVISRAFSSLEQM 150
Query: 157 LEYSFPWLYQ 166
++++ + Q
Sbjct: 151 IKWTQHLVAQ 160
>gi|124010468|ref|ZP_01695107.1| methyltransferase GidB [Microscilla marina ATCC 23134]
gi|123983446|gb|EAY23934.1| methyltransferase GidB [Microscilla marina ATCC 23134]
Length = 211
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 9 ILRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ + + +L + +++ E+ L+ W++KIN+VS V+ + RHV SL + +
Sbjct: 1 MEKLDIVLKYFPDLTDAQKEQFIKMNELYQDWNEKINVVSRKDVDMLYERHVLHSLGIAK 60
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + S +DLG+GGGFPG+ +I E L++S KK ++ VV
Sbjct: 61 VIQFKPGSKVLDLGTGGGFPGVPLAIMFPKTE---FYLVDSIAKKIKVVQEVVAGLGLTN 117
Query: 126 K-VFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R+++ D I +RA+A L TL +S
Sbjct: 118 VKAEQVRVEKVDD---DFDFIVSRAVAPLKTLHNWS 150
>gi|113477232|ref|YP_723293.1| 16S rRNA methyltransferase GidB [Trichodesmium erythraeum IMS101]
gi|123056302|sp|Q10Y54|RSMG_TRIEI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110168280|gb|ABG52820.1| methyltransferase GidB [Trichodesmium erythraeum IMS101]
Length = 255
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-------P 70
+ + E ++ + Y L + +KK+NL + E+FW +H+ DSLR +
Sbjct: 21 NWQPTVEQKQQFQKLYELIILGNKKLNLTRITKPEEFWEKHLWDSLRGIKFILENKIHWS 80
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFA 129
ID+G+G GFPG++ +I L V L++S KK SF+ ++ +
Sbjct: 81 EEKKVIDIGTGAGFPGLLVAIILPQ---YAVTLLDSTRKKISFIENILTDLNIKNALTIT 137
Query: 130 CRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
R+++ + T D+ RA+A EY+ P L
Sbjct: 138 NRVEQIGRLFKYRETYDIGLLRAVASTVVCAEYALPLLK 176
>gi|312794884|ref|YP_004027806.1| methyltransferase gidB [Burkholderia rhizoxinica HKI 454]
gi|312166659|emb|CBW73662.1| Methyltransferase gidB (EC 2.1.-.-) [Burkholderia rhizoxinica HKI
454]
Length = 236
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+LR +S E + L + L KW+ NL + I+H+ DSL +
Sbjct: 26 LLRGGATELGVPLSEEQIGGLLDYVGLLTKWNAVYNLTAIREPRQMVIQHLLDSLAIVPY 85
Query: 69 HP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P+ +D+GSGGG PGI+ ++ + S + V + +KK +F +
Sbjct: 86 IASRSPASLLDVGSGGGLPGIVIALAMPSCD---VVTNDIVHKKTAFQQQAKGCLRLSNL 142
Query: 126 KVFACRIQEAPQMIT---TCDVISARALADLDTLLEYSFPWLYQ 166
+ R+Q I D I +RA A+L + + +
Sbjct: 143 SIVTGRVQALRAEIDVPVRFDAIVSRAFAELADFVTLARHLVRP 186
>gi|88811303|ref|ZP_01126559.1| glucose-inhibited division protein B [Nitrococcus mobilis Nb-231]
gi|88791842|gb|EAR22953.1| glucose-inhibited division protein B [Nitrococcus mobilis Nb-231]
Length = 203
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+E+ + L +W++ NL + D +RHV DSL V +D+GSG G P
Sbjct: 12 VERHLRYIELLQRWNRTFNLTAIRAPLDMVVRHVLDSLTVHPYV-RGDRVLDVGSGAGLP 70
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
GI ++ V L++S KK FLR VV + A E + D +
Sbjct: 71 GIPLALASPE---HSVVLLDSNGKKIRFLRQVVFELALTNVTVVQARAERFRPALPFDTV 127
Query: 146 SARALADLDTLLEYSFPWLYQ 166
ARA ADL LL ++P L
Sbjct: 128 IARAFADLPALLRIAWPLLAP 148
>gi|94967073|ref|YP_589121.1| methyltransferase GidB [Candidatus Koribacter versatilis Ellin345]
gi|189039371|sp|Q1IVQ3|RSMG_ACIBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94549123|gb|ABF39047.1| 16S rRNA m(7)G-527 methyltransferase [Candidatus Koribacter
versatilis Ellin345]
Length = 219
Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ I R LL+ V+ LE++ + L LKW+ ++NL + E +RH +
Sbjct: 8 RKMPGVEIARIAELLDPIVVAERQLEQISVYLDLLLKWNARMNLTAVRDPEQIVLRHFGE 67
Query: 62 SLR----VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
SL +F +D+GSG GFPG+ +I+ + V LIE+ KKA+FL+ V
Sbjct: 68 SLFAARELFPDPDATGSLVDVGSGAGFPGVPIAIERPGL---SVTLIEAHGKKATFLKEV 124
Query: 118 VQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V+ T V A R +E + DV++ RA+ + ++L S +
Sbjct: 125 VRSTRLTNASVQAIRAEE---YVGVADVVTMRAVEEFASILPVSARLVRP 171
>gi|310778409|ref|YP_003966742.1| 16S rRNA m(7)G-527 methyltransferase [Ilyobacter polytropus DSM
2926]
gi|309747732|gb|ADO82394.1| 16S rRNA m(7)G-527 methyltransferase [Ilyobacter polytropus DSM
2926]
Length = 233
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGF 84
++ L + L L+ +K NL + + +H DS+ + + + ID+G+G GF
Sbjct: 21 IDNLIAYAKLLLETNKHTNLTAIRDEDSLIEKHFIDSMLLQKSISENTETAIDIGTGAGF 80
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA--PQMITT 141
PG++ +I I+ L++S KK FL V + +V R +E + T
Sbjct: 81 PGMVLAICNPKIK---FTLMDSVGKKTDFLEMVKNELGLENVEVINDRAEEFIKNEKRGT 137
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
D+ R ++ L+ +LEY P+L
Sbjct: 138 YDLGLCRGVSKLNVILEYMIPFLK 161
>gi|225873766|ref|YP_002755225.1| methyltransferase GidB [Acidobacterium capsulatum ATCC 51196]
gi|225791675|gb|ACO31765.1| methyltransferase GidB [Acidobacterium capsulatum ATCC 51196]
Length = 219
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWI 76
VS E+L F L LKW+ + NL + E RH DS+ + P +
Sbjct: 21 GTPVSGAEAERLGAFLALLLKWNARTNLTAIREPEQMVRRHFADSVFCARNLPEGTKTLL 80
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D GSGGGFPGI ++ + V L ES+ +KASFLR V+ R +V+A R++E P
Sbjct: 81 DFGSGGGFPGIPVALLRPEV---SVTLAESQGRKASFLREAVRSLGLRAEVWAERVEEMP 137
Query: 137 QMITTCDVISARALADL 153
D ++ RA+ +
Sbjct: 138 VGR-CFDCVTLRAVDRM 153
>gi|134281460|ref|ZP_01768168.1| methyltransferase GidB [Burkholderia pseudomallei 305]
gi|134247127|gb|EBA47213.1| methyltransferase GidB [Burkholderia pseudomallei 305]
Length = 213
Score = 147 bits (371), Expect = 5e-34, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 1 MLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH 60
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +D+GSGGG PG++ +I L V L + +KK++F V +
Sbjct: 61 LGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQVKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|227538457|ref|ZP_03968506.1| glucose-inhibited cell division protein [Sphingobacterium
spiritivorum ATCC 33300]
gi|227241643|gb|EEI91658.1| glucose-inhibited cell division protein [Sphingobacterium
spiritivorum ATCC 33300]
Length = 211
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIWID 77
++ + L+ W+ +IN++S +E ++ HV SL + + + +D
Sbjct: 15 LTETQKNQFAQLAELYPFWNNQINVISRKDIESLYLHHVLHSLGIAKFMTEITAGTHILD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I ++ +L++S KK +R V + R +
Sbjct: 75 VGTGGGFPGIPLAILFPEVK---FHLVDSIGKKIKVVREVATALGLTNVEADHMRAE--- 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q+ D + +RA+ L PW+ K
Sbjct: 129 QLDYKYDFVVSRAVTRLGDFA----PWIRNK 155
>gi|312964008|ref|ZP_07778479.1| glucose inhibited division protein B [Pseudomonas fluorescens WH6]
gi|311282043|gb|EFQ60653.1| glucose inhibited division protein B [Pseudomonas fluorescens WH6]
Length = 214
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++S E L + L +KW+K NL + ++ RH+ DSL V
Sbjct: 13 LSTGARQLGIDLSAAQHELLLGYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVMPFI 72
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
W+D+GSGGG PGI +I + V ++S KK FL V + +V
Sbjct: 73 -ENGRWLDVGSGGGMPGIPLAILFPEAQ---VTCLDSNGKKTRFLTQVKLELKLDNLQVI 128
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ + + I +RA + ++ ++
Sbjct: 129 HSRVEDFTPEL-PFNGIVSRAFSSMENFSNWTRHL 162
>gi|289548693|ref|YP_003473681.1| methyltransferase GidB [Thermocrinis albus DSM 14484]
gi|289182310|gb|ADC89554.1| methyltransferase GidB [Thermocrinis albus DSM 14484]
Length = 197
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+++ + N +N++ E +++ + + +W+K NL S E RH DSL +
Sbjct: 2 PAELIKDIFQRNGFNLTEEQIQRFDLYLRELKRWNKVHNLTSLEEDEQIIKRHFLDSLTL 61
Query: 66 FQLHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+GSG GFPG+ I + LIES +KK SFL Y+
Sbjct: 62 TLCIEEKGIDVKGKKVCDVGSGAGFPGVPLKIFYQD--AINLTLIESVSKKCSFLEYLKV 119
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+V R ++ V+ +RAL L E + P L
Sbjct: 120 VLDIDYRVLCTRAEKVK---EKFYVVVSRALGPL----EETLPLL 157
>gi|126442288|ref|YP_001060974.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 668]
gi|126221781|gb|ABN85287.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 668]
Length = 213
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 1 MLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH 60
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 61 LGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRSGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|146328718|ref|YP_001210034.1| glucose inhibited division protein GidB [Dichelobacter nodosus
VCS1703A]
gi|189039384|sp|A5EXK3|RSMG_DICNV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146232188|gb|ABQ13166.1| glucose inhibited division protein GidB [Dichelobacter nodosus
VCS1703A]
Length = 211
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ + +L+ ++ V++E +EKL ++ L KW++ NL + + I H+ DS
Sbjct: 5 FIAAEELLQRGAAALSFPVNQEVIEKLMHYLQLLAKWNRVHNLTAIREPQQQVIVHLLDS 64
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V P D+GSG G PGI+ +I + L+ES KK+ FLR V++ A
Sbjct: 65 LVVAPFLPPAQTIADIGSGAGLPGIVLAIVCPQQQ---FFLVESNTKKSVFLREAVRQLA 121
Query: 123 ARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
V A R ++ + +V+ +RA++D+++ L ++
Sbjct: 122 LENVKVVAMRAEQ-WRPEAKLNVLISRAVSDINSFLMWTA 160
>gi|126663166|ref|ZP_01734164.1| glucose-inhibited division protein/predicted methyltransferase
[Flavobacteria bacterium BAL38]
gi|126624824|gb|EAZ95514.1| glucose-inhibited division protein/predicted methyltransferase
[Flavobacteria bacterium BAL38]
Length = 209
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N+S + + + L+ W+ KIN++S +++ + RHV SL + ++ + S +D
Sbjct: 10 NLSDNQILQFQKLQSLYEDWNAKINVISRKDIDELYTRHVLHSLGIAKIIEFRPGSKIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI +I ++ LI+ KK + V + R +
Sbjct: 70 VGTGGGFPGIPLAILHPEVD---FYLIDVIAKKIRVVNEVAAGLGLKNVKAEQKRAELVK 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
Q D I +RA+ ++ + +
Sbjct: 127 QE---FDFIVSRAVTNMPDFVSW 146
>gi|194335474|ref|YP_002017268.1| methyltransferase GidB [Pelodictyon phaeoclathratiforme BU-1]
gi|226725360|sp|B4SC71|RSMG_PELPB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194307951|gb|ACF42651.1| methyltransferase GidB [Pelodictyon phaeoclathratiforme BU-1]
Length = 228
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 8/167 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ D+ L+ + TL++L + +W+ KINL+S I+H+
Sbjct: 3 RMNDNVLTLQMLCAEQGMEIDLPTLQQLARYGDCLERWNHKINLISRKEDAPVIIKHIFH 62
Query: 62 SLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + H + +DLG+GGG PGI S+ L+++ KK + + ++
Sbjct: 63 SLLITLYHSFREGEDVLDLGTGGGLPGIPLSLLFPRTR---FLLVDATGKKIAACQAMIT 119
Query: 120 KTAARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + R++E ++ D + +R +A LD L YS P L
Sbjct: 120 ELGINNAIALHTRVEELKGVV--FDTVLSRQVAPLDKLCSYSAPLLK 164
>gi|172038831|ref|YP_001805332.1| glucose inhibited division protein B [Cyanothece sp. ATCC 51142]
gi|171700285|gb|ACB53266.1| glucose inhibited division protein B [Cyanothece sp. ATCC 51142]
Length = 241
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSI 74
+ ++E LEK E Y L +++INL + EDFW +H+ DSL Y +
Sbjct: 15 QWQPTQEQLEKWEILYQELLLVNRQINLTRITEPEDFWEKHLWDSLAGVIGLDFINYENS 74
Query: 75 W--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG+ I S + + L++S KK + ++ + R
Sbjct: 75 LKVIDIGTGAGFPGLPIGIIFSHWK---LTLLDSTQKKIKVINLFLEALKLNNSQTVIGR 131
Query: 132 IQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
++ PQ T D+ RA+A+ EY P+L
Sbjct: 132 AEDIGHLPQHRETYDLGLLRAVAEPSVCAEYVLPFLK 168
>gi|170077371|ref|YP_001734009.1| 16S rRNA methyltransferase GidB [Synechococcus sp. PCC 7002]
gi|169885040|gb|ACA98753.1| glucose inhibited division protein B [Synechococcus sp. PCC 7002]
Length = 249
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL------HPYPSIWIDLGSGG 82
L Y ++++NL ++ EDFW +H+ DS +L P ID+G+GG
Sbjct: 31 LAALYHGICDGNQRLNLTRITSPEDFWEKHLWDSYAALKLDVLAERLTQPQKVIDVGTGG 90
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ---EAPQMI 139
GFPGI +I + + L+++ KK +FL + Q A R + + P+
Sbjct: 91 GFPGIPLAIAFPEWQ---ITLLDATRKKINFLVELSQTLQLNTLGIADRAETLGQDPKYR 147
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
+ D+ + RA+ +EY P L
Sbjct: 148 ESYDIATIRAVGKASLCVEYLLPLLK 173
>gi|329847388|ref|ZP_08262416.1| 16S rRNA methyltransferase GidB [Asticcacaulis biprosthecum C19]
gi|328842451|gb|EGF92020.1| 16S rRNA methyltransferase GidB [Asticcacaulis biprosthecum C19]
Length = 213
Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++V +E ++ L F + ++ +NLV T+ +W RHV DS ++ L P W DL
Sbjct: 12 FHVKQEAVDDLTAFGAMVADKNEVMNLVGPLTLPHYWSRHVLDSAQLLNLRPNAQTWADL 71
Query: 79 GSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+G GFPG++ +I L + V LI+S K+ FL VV + A V R +
Sbjct: 72 GAGAGFPGVVLAILLKHTADAPNVYLIDSLAKRCRFLEAVVAELALPAVVINDRAE---N 128
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV++ARA A + LL ++ +++
Sbjct: 129 LNLRVDVVTARACAPMTRLLGFAERFIHN 157
>gi|206900779|ref|YP_002251265.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
gi|226797823|sp|B5YFF7|RSMG_DICT6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|206739882|gb|ACI18940.1| methyltransferase GidB [Dictyoglomus thermophilum H-6-12]
Length = 240
Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQ 67
ILR ++ EK +Y +W++KINL S E+ ++H DSL +
Sbjct: 8 ILREKVSELNLSLDPLQEEKFYLYYMALKEWNRKINLTSLEGEEEIILKHFVDSLSCIIP 67
Query: 68 LHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ ID+G+G GFPGI I E + L+ES+ KK FL +++
Sbjct: 68 IRNENIERIIDIGTGAGFPGIPIKIY---DEKYKLTLLESQKKKILFLEELIKILELSDV 124
Query: 126 KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R + + P+ D+ AR +A + +LEY+ P++
Sbjct: 125 EIVWDRAENLGKDPRYREQFDLALARGVAKPNIVLEYALPFVK 167
>gi|189039666|sp|A3NF53|RSMG_BURP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 232
Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 18 QALLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV 77
Query: 67 Q---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 78 PHLGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKL 134
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 135 GNLSVVTGRVETLRSGADVPAKFDVIVSRAFADLADFVTLARHLVAP 181
>gi|76809860|ref|YP_331605.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710b]
gi|124386113|ref|YP_001027578.1| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10229]
gi|254298692|ref|ZP_04966143.1| methyltransferase GidB [Burkholderia pseudomallei 406e]
gi|254357416|ref|ZP_04973690.1| methyltransferase GidB [Burkholderia mallei 2002721280]
gi|123600830|sp|Q3JXU8|RSMG_BURP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039670|sp|Q62FS7|RSMG_BURMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189039671|sp|A1V8U2|RSMG_BURMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|76579313|gb|ABA48788.1| methyltransferase GidB [Burkholderia pseudomallei 1710b]
gi|148026480|gb|EDK84565.1| methyltransferase GidB [Burkholderia mallei 2002721280]
gi|157808557|gb|EDO85727.1| methyltransferase GidB [Burkholderia pseudomallei 406e]
Length = 232
Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 18 QALLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV 77
Query: 67 Q---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 78 PHLGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKL 134
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 135 GNLSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAP 181
>gi|39998552|ref|NP_954503.1| glucose-inhibited division protein B [Geobacter sulfurreducens PCA]
gi|55976460|sp|Q746Q5|RSMG_GEOSL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|39985499|gb|AAR36853.1| glucose-inhibited division protein B [Geobacter sulfurreducens PCA]
gi|298507494|gb|ADI86217.1| 16S rRNA (7-methyl-G527)-methyltransferase [Geobacter
sulfurreducens KN400]
Length = 217
Score = 146 bits (370), Expect = 7e-34, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL+ +S E + F KW++KINL + + E+ ++H DSL + +L
Sbjct: 8 ILQEGAAELGVEISDELVTLFSLFADELKKWNRKINLTAITGDEEIALKHFVDSLALCRL 67
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
+DLGSGGGFP + ++ ++ V ++ KK F R+ + R +
Sbjct: 68 VSGDDELLDLGSGGGFPVLPLALVFPTMTAVSV---DAVEKKIIFQRHAARLLGCRRFEA 124
Query: 128 FACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWLYQK 167
R ++ P+M+ + I +RA +D+ + + P L +
Sbjct: 125 IHARGEDLPRMLERRFNRIVSRAFSDIPSFARMALPLLMPQ 165
>gi|78189778|ref|YP_380116.1| 16S rRNA methyltransferase GidB [Chlorobium chlorochromatii CaD3]
gi|123579260|sp|Q3APK2|RSMG_CHLCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78171977|gb|ABB29073.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium chlorochromatii
CaD3]
Length = 234
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++IL + ++ E ++KL + L +W+ KINL+S I+H+ SL +
Sbjct: 21 PHAILEGLCKEQSLALAPEMVDKLVEYGRLLEEWNNKINLISRKEDAPIIIKHIFHSLLI 80
Query: 66 FQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
Q H + +DLG+GGG PGI +I L+++ KK + + ++
Sbjct: 81 TQHHTFQTGEKVLDLGTGGGLPGIPLAIIAPQ---ATFLLVDATGKKITACQEMIATLKL 137
Query: 124 RGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++E T I +R +A L+ L Y P L++K
Sbjct: 138 TNVTARHLRVEEL--HGETFHTIVSRQVALLNKLCAYGEPLLHEK 180
>gi|257095886|ref|YP_003169527.1| methyltransferase GidB [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048410|gb|ACV37598.1| methyltransferase GidB [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 215
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L +S +KL + L KW++ L + S H+ DSL +
Sbjct: 3 PAAQLAQGLSTLGIALSAPAQQKLLAYATLLAKWNRTYRLTAMSDPALAVSHHLLDSLAL 62
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P +D+GSGGG PGI +I + V L++S +KKA+FL+ V +
Sbjct: 63 LPFVEAPP-LLDVGSGGGMPGIPLAIARPDLP---VVLLDSSSKKAAFLQQVAIELGLGN 118
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
C EA + T I+ARA + L ++ S L +
Sbjct: 119 IAVHCGRVEAYRPTTGFAAITARAFSHLAEFVQLSRHLLAE 159
>gi|288924953|ref|ZP_06418889.1| 16S rRNA methyltransferase GidB [Prevotella buccae D17]
gi|315607986|ref|ZP_07882979.1| glucose inhibited division protein B [Prevotella buccae ATCC 33574]
gi|288338143|gb|EFC76493.1| 16S rRNA methyltransferase GidB [Prevotella buccae D17]
gi|315250455|gb|EFU30451.1| glucose inhibited division protein B [Prevotella buccae ATCC 33574]
Length = 208
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L Y N + E +L+ L+ +W+ KIN++S +++ + RHV SL +
Sbjct: 4 LIKKYFPNLSKIQEEQYAQLD---QLYREWNAKINVISRKDMDNLYERHVLHSLAIACNI 60
Query: 70 PY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ + +D G+GGGFPGI +I ++ +I+ KK + V Q +
Sbjct: 61 HFRPGTEVLDFGTGGGFPGIPLAIMFPEVK---FRMIDGTGKKIRVVNEVAQALELKNVT 117
Query: 128 -FACRIQEAPQMITTCDVISARALADLDTLLE 158
R +E D + +RA+ L L++
Sbjct: 118 AVHQRGEE---EKGKFDFVVSRAVMPLPDLVK 146
>gi|254184035|ref|ZP_04890626.1| methyltransferase GidB [Burkholderia pseudomallei 1655]
gi|189039672|sp|A3P103|RSMG_BURP0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|184214567|gb|EDU11610.1| methyltransferase GidB [Burkholderia pseudomallei 1655]
Length = 232
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 18 QALLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV 77
Query: 67 Q---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 78 PHLGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKL 134
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 135 GNLSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAP 181
>gi|53721014|ref|YP_110000.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei K96243]
gi|251767389|ref|ZP_02267062.2| 16S rRNA methyltransferase GidB [Burkholderia mallei PRL-20]
gi|262193307|ref|YP_001082524.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10247]
gi|81607635|sp|Q63PG9|RSMG_BURPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|294862466|sp|A2S6K9|RSMG_BURM9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|294862495|sp|A3MQI8|RSMG_BURM7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|52211428|emb|CAH37419.1| methyltransferase GidB [Burkholderia pseudomallei K96243]
gi|243062886|gb|EES45072.1| 16S rRNA methyltransferase GidB [Burkholderia mallei PRL-20]
gi|261826012|gb|ABN03402.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10229]
gi|261835042|gb|ABO04723.2| 16S rRNA methyltransferase GidB [Burkholderia mallei NCTC 10247]
Length = 230
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 16 QALLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV 75
Query: 67 Q---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 76 PHLGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKL 132
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 133 GNLSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAP 179
>gi|70733508|ref|YP_263283.1| 16S rRNA methyltransferase GidB [Pseudomonas fluorescens Pf-5]
gi|82592864|sp|Q4K3A0|RSMG_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68347807|gb|AAY95413.1| methyltransferase GidB [Pseudomonas fluorescens Pf-5]
Length = 211
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 6/157 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L +S + L + L +KW+K NL + ++ RH+ DSL V
Sbjct: 8 DELSTGARQLGVELSPTQHQLLLGYLALLIKWNKAYNLTAVRDPDEMVSRHLLDSLSVMS 67
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
W+D+GSGGG PGI +I + V ++S KK FL V + +
Sbjct: 68 FI-ENGCWLDVGSGGGMPGIPLAILFPESQ---VTCLDSNGKKTRFLTQVKLELKLENLQ 123
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
V R++ A + I +RA + ++ ++
Sbjct: 124 VIHSRVE-AFTPEQPFNGIISRAFSSMENFTSWTRHL 159
>gi|53724004|ref|YP_104450.1| 16S rRNA methyltransferase GidB [Burkholderia mallei ATCC 23344]
gi|67643080|ref|ZP_00441829.1| 16S rRNA methyltransferase GidB [Burkholderia mallei GB8 horse 4]
gi|121598363|ref|YP_994645.1| 16S rRNA methyltransferase GidB [Burkholderia mallei SAVP1]
gi|167721835|ref|ZP_02405071.1| methyltransferase GidB [Burkholderia pseudomallei DM98]
gi|167818022|ref|ZP_02449702.1| methyltransferase GidB [Burkholderia pseudomallei 91]
gi|167826385|ref|ZP_02457856.1| methyltransferase GidB [Burkholderia pseudomallei 9]
gi|167847904|ref|ZP_02473412.1| methyltransferase GidB [Burkholderia pseudomallei B7210]
gi|167896461|ref|ZP_02483863.1| methyltransferase GidB [Burkholderia pseudomallei 7894]
gi|167921078|ref|ZP_02508169.1| methyltransferase GidB [Burkholderia pseudomallei BCC215]
gi|217424010|ref|ZP_03455510.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 576]
gi|226193255|ref|ZP_03788865.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei Pakistan
9]
gi|237814357|ref|YP_002898808.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei MSHR346]
gi|254174686|ref|ZP_04881347.1| methyltransferase GidB [Burkholderia mallei ATCC 10399]
gi|254201526|ref|ZP_04907890.1| methyltransferase GidB [Burkholderia mallei FMH]
gi|254206864|ref|ZP_04913215.1| methyltransferase GidB [Burkholderia mallei JHU]
gi|254258661|ref|ZP_04949715.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710a]
gi|52427427|gb|AAU48020.1| methyltransferase GidB [Burkholderia mallei ATCC 23344]
gi|121227173|gb|ABM49691.1| methyltransferase GidB [Burkholderia mallei SAVP1]
gi|147747420|gb|EDK54496.1| methyltransferase GidB [Burkholderia mallei FMH]
gi|147752406|gb|EDK59472.1| methyltransferase GidB [Burkholderia mallei JHU]
gi|160695731|gb|EDP85701.1| methyltransferase GidB [Burkholderia mallei ATCC 10399]
gi|217393073|gb|EEC33095.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 576]
gi|225934855|gb|EEH30832.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei Pakistan
9]
gi|237506501|gb|ACQ98819.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei MSHR346]
gi|238524329|gb|EEP87762.1| 16S rRNA methyltransferase GidB [Burkholderia mallei GB8 horse 4]
gi|254217350|gb|EET06734.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1710a]
Length = 213
Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 1 MLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH 60
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 61 LGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|300770006|ref|ZP_07079885.1| 16S rRNA methyltransferase GidB [Sphingobacterium spiritivorum ATCC
33861]
gi|300762482|gb|EFK59299.1| 16S rRNA methyltransferase GidB [Sphingobacterium spiritivorum ATCC
33861]
Length = 211
Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIWID 77
++ + L+ W+ +IN++S +E ++ HV SL + + + +D
Sbjct: 15 LTETQKNQFAQLAELYPFWNNQINVISRKDIESLYLHHVLHSLGIAKFMTEFAPGTHILD 74
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I ++ +L++S KK +R V + R +
Sbjct: 75 VGTGGGFPGIPLAILFPEVK---FHLVDSIGKKIKVVREVATALGLTNVEADHMRAE--- 128
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
Q+ D + +RA+ L PW+ K
Sbjct: 129 QLDYKYDFVVSRAVTRLGDFT----PWIRNK 155
>gi|110598116|ref|ZP_01386394.1| methyltransferase GidB [Chlorobium ferrooxidans DSM 13031]
gi|110340248|gb|EAT58745.1| methyltransferase GidB [Chlorobium ferrooxidans DSM 13031]
Length = 227
Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D + L+A ++ + E LEKL ++ L +W+ K+NL+S I+H+ S+
Sbjct: 13 DELTTLQALCAEHSIELDTEKLEKLVHYGHLLEEWNLKVNLISRKEDSPVIIKHIFHSIL 72
Query: 65 VFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ H + +DLG+GGG PGI SI L+++ KK + + ++++
Sbjct: 73 ISSYHSFRKEERVLDLGTGGGLPGIPLSIAFPDTR---FLLVDATGKKITACQAMIKELG 129
Query: 123 ARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++E ++ D + +R +A L+ L Y+ L
Sbjct: 130 ITNAIAMHTRVEELKGVV--FDTVLSRQVAPLEQLCRYAARLLKP 172
>gi|284034937|ref|YP_003384868.1| methyltransferase GidB [Kribbella flavida DSM 17836]
gi|283814230|gb|ADB36069.1| methyltransferase GidB [Kribbella flavida DSM 17836]
Length = 223
Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 20 NVSRET-----------LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+VSRET ++L + L L+ V W RH+ + + +L
Sbjct: 4 DVSRETPPLVEELYPGAADRLSAYAELLATEGTLRGLIGPREVPRLWDRHLLNCAVLERL 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
P S D+G+G G PGI+ ++ + V L+E ++ +FL VQ+ +V
Sbjct: 64 IPEQSSVADVGTGAGLPGIVLALVRPDLH---VALVEPLLRRTTFLEEAVQQLGCDNAEV 120
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ P + DV+++RA+A L L + P +
Sbjct: 121 VRARAEDLP--PASFDVVTSRAVAPLGKLAGWCLPLCAE 157
>gi|254375227|ref|ZP_04990707.1| glucose-inhibited cell division protein [Francisella novicida
GA99-3548]
gi|151572945|gb|EDN38599.1| glucose-inhibited cell division protein [Francisella novicida
GA99-3548]
Length = 205
Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ ++ + +++ + L KW+K N+ + +++ ++H+ DSL V + S
Sbjct: 12 LSELDILATEVQIDQWLDYLKLLEKWNKVYNITAIKNIDEMLVKHLFDSLAVAKYIKGDS 71
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+GGG PG++ +I + L++S KK FL+ V + + RI
Sbjct: 72 T-VDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPINTRI 127
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 128 ENLE---GNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|126730102|ref|ZP_01745914.1| glucose-inhibited division protein B [Sagittula stellata E-37]
gi|126709482|gb|EBA08536.1| glucose-inhibited division protein B [Sagittula stellata E-37]
Length = 205
Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 60/143 (41%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
NVSR T KLE + L KW+ INLVS T++D RH DS ++ L P +DL
Sbjct: 10 NVSRGTSLKLEQYLSLLKKWNTVINLVSPKTLDDAVKRHFLDSAQLVDLMPEDAGTLVDL 69
Query: 79 GSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
GSGGGFPG++ +I + L V L+ES +KASFLR V+++T G V + RI +
Sbjct: 70 GSGGGFPGLVIAILSAETRPNLKVTLVESDQRKASFLRTVLRETEISGTVLSKRIMDVEP 129
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ D+++ARALA L L +++
Sbjct: 130 L--QADILTARALAPLLELCQFA 150
>gi|125554703|gb|EAZ00309.1| hypothetical protein OsI_22326 [Oryza sativa Indica Group]
Length = 210
Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 14/134 (10%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHP-------YPSIWIDLGSGGGFPGIITSIQLSS 95
+NL + + + RHV DSL V +D+GSG G PG+I ++ S
Sbjct: 1 MNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDLGGMRLVDVGSGAGLPGLILAVARPS 60
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQMITTCDVISARALA 151
+ L+ES K+ FL + V+ V R + ++P DV ARA+A
Sbjct: 61 WK---FTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAENVGQSPDFREAFDVAVARAVA 117
Query: 152 DLDTLLEYSFPWLY 165
+L L EY P +
Sbjct: 118 ELKVLAEYCLPLVR 131
>gi|29830853|ref|NP_825487.1| 16S rRNA methyltransferase GidB [Streptomyces avermitilis MA-4680]
gi|29607966|dbj|BAC72022.1| putative 16S ribosomal RNA small subunit methyltransferase
[Streptomyces avermitilis MA-4680]
Length = 246
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 8/171 (4%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETL-EKLE---YFYFLFLKWSKKINLVSSSTVEDFWI 56
M+Y + + A L +RE ++ + L + + L+ V W
Sbjct: 1 MRYGRTVPVTEAAELPPAPEQAREVFGDRFADAVRYAELLAEAGVQRGLIGPREVPRLWE 60
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL
Sbjct: 61 RHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVREDLK---ITLLEPLLRRTNFLTE 117
Query: 117 VVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
VV+ V R +E I V++ARA+A LD L + P L
Sbjct: 118 VVELLGLDHVTVIRGRAEEVMGKIPPVHVVTARAVAPLDRLATWGIPLLRP 168
>gi|126734410|ref|ZP_01750157.1| glucose-inhibited division protein B [Roseobacter sp. CCS2]
gi|126717276|gb|EBA14140.1| glucose-inhibited division protein B [Roseobacter sp. CCS2]
Length = 206
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 4/155 (2%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ + NVSRET++ LE F L KW+ KINL++SSTV W RH+ DS ++++ P
Sbjct: 2 DAQVAGINVSRETIDNLEAFGTLVTKWTPKINLIASSTVATLWDRHIIDSAQIYRFAPKD 61
Query: 73 -SIWIDLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
W+D+GSGGGFPGII +I S++ LIES +KA FLR ++ R V A
Sbjct: 62 YENWVDMGSGGGFPGIIMAIMAKSLQPDARFTLIESDQRKAIFLRTAARECGLRVDVIAQ 121
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
RI+ P+ + DV+SARAL L LL + L
Sbjct: 122 RIESVPKQL--ADVVSARALTALSGLLPAAERHLK 154
>gi|158521205|ref|YP_001529075.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
gi|158510031|gb|ABW66998.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
Length = 246
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 6/164 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
S +R V+ LE +W++ +NL + + + +H DS+
Sbjct: 20 RSRVREGAQALGIAVTDRHLESFSLHAEELARWNRTVNLTAITDPAESAEKHFLDSIVPA 79
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
P +D+G+G GFPGI + S++ + L++S K+ +FL V++ R
Sbjct: 80 TFIPPDGTLLDIGTGAGFPGIPLKVVFPSLD---LTLLDSALKRVTFLLQVLRLLGLERT 136
Query: 126 KVFACRIQ--EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
V R++ E P D I RA L + + P L +K
Sbjct: 137 IVLHRRMEQMERPPAARPFDTIICRAFTALPAFVAAALPLLSEK 180
>gi|118496713|ref|YP_897763.1| glucose-inhibited cell division protein [Francisella tularensis
subsp. novicida U112]
gi|194324020|ref|ZP_03057795.1| methyltransferase GidB [Francisella tularensis subsp. novicida FTE]
gi|166224589|sp|A0Q444|RSMG_FRATN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118422619|gb|ABK89009.1| glucose-inhibited cell division protein [Francisella novicida U112]
gi|194321917|gb|EDX19400.1| methyltransferase GidB [Francisella tularensis subsp. novicida FTE]
Length = 205
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ ++ + +++ + L KW+K N+ + +++ ++H+ DSL V + S
Sbjct: 12 LSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDS 71
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+GGG PG++ +I + L++S KK FL+ V + + RI
Sbjct: 72 T-VDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPINTRI 127
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 128 ENLE---GNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|256381070|ref|YP_003104730.1| methyltransferase GidB [Actinosynnema mirum DSM 43827]
gi|255925373|gb|ACU40884.1| methyltransferase GidB [Actinosynnema mirum DSM 43827]
Length = 223
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E K F + + + L+ V+ W RHV +S V +L P S +D+GSG G
Sbjct: 15 EHSAKAVEFTAMLTEHGVERGLIGPREVDRLWERHVLNSAVVAELLPQGSKVVDVGSGAG 74
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI +I +E + L+E ++ ++L VV + +V R +E P + +
Sbjct: 75 LPGIPLAIARPDLE---LVLLEPMARRVAWLTEVVDALGLQVEVVRGRAEEGPVRKRLAD 131
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV++ARA+A L+ L + P L
Sbjct: 132 RDVVTARAVAPLERLAGWCLPLLRP 156
>gi|126738503|ref|ZP_01754208.1| glucose-inhibited division protein B [Roseobacter sp. SK209-2-6]
gi|126720302|gb|EBA17008.1| glucose-inhibited division protein B [Roseobacter sp. SK209-2-6]
Length = 211
Score = 146 bits (369), Expect = 9e-34, Method: Composition-based stats.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 9/162 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--- 69
+ + + +VSRET+++L +F KW+ KINLVS S+++DFW RH+ DS +VF L
Sbjct: 4 DLICGSLDVSRETIDRLSHFEQTLFKWNPKINLVSKSSLQDFWTRHIVDSAQVFLLAEDY 63
Query: 70 ---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARG 125
+ W+D+GSGGGFPG++ +I + L V LIES +KA+FLR ++ R
Sbjct: 64 ISKEEDTNWLDIGSGGGFPGLVIAILAAERAARLSVTLIESDKRKAAFLRTAARECDVRV 123
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
KV + RI++ +SARALADLD L E+S L+ +
Sbjct: 124 KVISDRIEKVDPQNANF--LSARALADLDLLFEFSERHLHPR 163
>gi|126454474|ref|YP_001068274.1| methyltransferase GidB [Burkholderia pseudomallei 1106a]
gi|242317084|ref|ZP_04816100.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106b]
gi|254194534|ref|ZP_04900965.1| methyltransferase GidB [Burkholderia pseudomallei S13]
gi|126228116|gb|ABN91656.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106a]
gi|169651284|gb|EDS83977.1| methyltransferase GidB [Burkholderia pseudomallei S13]
gi|242140323|gb|EES26725.1| 16S rRNA methyltransferase GidB [Burkholderia pseudomallei 1106b]
Length = 213
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 1 MLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH 60
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 61 LGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|62263584|gb|AAX78174.1| unknown protein [synthetic construct]
Length = 240
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ ++ + +++ + L KW+K N+ + +++ ++H+ DSL V + S
Sbjct: 38 LSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDS 97
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+GGG PG++ +I + L++S KK FL+ V + + RI
Sbjct: 98 T-VDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRI 153
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 154 ENLE---GNFDNIISRAFSSVDTFYELCKHFLTE 184
>gi|82703882|ref|YP_413448.1| methyltransferase GidB [Nitrosospira multiformis ATCC 25196]
gi|123543763|sp|Q2Y5B5|RSMG_NITMU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|82411947|gb|ABB76056.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosospira multiformis ATCC
25196]
Length = 216
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 4/155 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ L +++ +L + L KW++ NL + E HV DSL V
Sbjct: 3 PATQLADGIATLGLSITESNQARLLQYLALIQKWNRVHNLTAVREPEAMLALHVLDSLAV 62
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S D+GSG G PGI ++ V L+ES +KKA+FL+ +
Sbjct: 63 LPHI-GGSRIADVGSGAGLPGIPVALARPEWR---VVLVESNHKKAAFLQQARIELGLEN 118
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
E + + + +RA +DL ++ +
Sbjct: 119 VEVIGERMEGVRSNAGFNTVISRAFSDLADFVKLA 153
>gi|167571771|ref|ZP_02364645.1| methyltransferase GidB [Burkholderia oklahomensis C6786]
Length = 213
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L +S L + L KW+ NL + ++H+ DSL +
Sbjct: 1 MLSEGAEALGVALSDAQHGALLDYVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPH 60
Query: 69 H---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+GSGGG PGI+ +I LS + V L + +KK++F +
Sbjct: 61 LGARGAAATALDVGSGGGLPGIVLAITLSEWQ---VTLNDIVHKKSAFQTQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRLGADVPGKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|160895497|ref|YP_001561079.1| 16S rRNA methyltransferase GidB [Delftia acidovorans SPH-1]
gi|160361081|gb|ABX32694.1| methyltransferase GidB [Delftia acidovorans SPH-1]
Length = 219
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 17/167 (10%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ + L A +++ ++ L F L KW+K NL + ++ H+ DSL
Sbjct: 4 ELRAPLEAGLQALGLDLTPAQIDTLMEFQALLGKWNKVYNLTAVRDPQEMLTHHLLDSLA 63
Query: 65 VFQLH----------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+ +D+GSGGG PG++ +I I+ V+ +++ KKA+F+
Sbjct: 64 AVPALQRHLAQMPAREGRTAMLDVGSGGGLPGVVFAICCPQID---VHCVDTVGKKAAFI 120
Query: 115 RYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + R++ Q+ T +IS RA A L +S
Sbjct: 121 QQAAATLRLPNLRGIHSRVE---QLTTRYPLISCRAFASLADFTSWS 164
>gi|189183333|ref|YP_001937118.1| 16S rRNA methyltransferase GidB [Orientia tsutsugamushi str. Ikeda]
gi|238692233|sp|B3CQX7|RSMG_ORITI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189180104|dbj|BAG39884.1| glucose inhibited division protein B [Orientia tsutsugamushi str.
Ikeda]
Length = 198
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 61/152 (40%), Positives = 92/152 (60%), Gaps = 9/152 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWI 76
YNVSRET K + +Y L KW+ INLVS++T+++FW RH+ DS+++ H I
Sbjct: 12 NYNVSRETFNKFKEYYSLLSKWNSTINLVSATTLQNFWQRHIFDSIQLLNYIHNKDIIVA 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLGSG GFPG++ SI V LIES ++KA+FL V Q + + ++ RIQ
Sbjct: 72 DLGSGAGFPGVVLSISG----IKNVILIESDSRKAAFLLQVAQLSDQKIEIINDRIQ--- 124
Query: 137 QMITTCDVISARALADLDTLLEYSFPW-LYQK 167
+ CD+++ RALA+L T+L ++ + + K
Sbjct: 125 NLKVKCDIVTVRALANLSTILSHTKQFTVKDK 156
>gi|254437935|ref|ZP_05051429.1| methyltransferase GidB [Octadecabacter antarcticus 307]
gi|198253381|gb|EDY77695.1| methyltransferase GidB [Octadecabacter antarcticus 307]
Length = 206
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 5/148 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWI 76
+VSRET+EKLE L +KW+K INL++ ++V + W RH+ DS +VF P + W+
Sbjct: 10 GVDVSRETMEKLEQLSALIIKWTKAINLIAPNSVPNLWDRHIVDSAQVFHCAPDSWTHWV 69
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLGSGGG P ++ +I + L+ LIES +K FL ++ + RI A
Sbjct: 70 DLGSGGGLPALVVAIL--DQQNRLITLIESDKRKCLFLTTARRELGLNISIINRRIANAE 127
Query: 137 QMITTCDVISARALADLDTLLEYSFPWL 164
+ +ISARALA L+ LL Y+ +L
Sbjct: 128 TVPAN--IISARALAPLNDLLGYADQFL 153
>gi|288927301|ref|ZP_06421148.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 317 str.
F0108]
gi|288330135|gb|EFC68719.1| 16S rRNA methyltransferase GidB [Prevotella sp. oral taxon 317 str.
F0108]
Length = 206
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ LE+L L+ W+++IN+VS +++ ++ HV SL + + + + +D
Sbjct: 10 ELTATQLEQLTQLGELYRTWNERINVVSRKDIDNLYLHHVLHSLAIAKYVQFKAGTRVLD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPGI +I LI+ KK + + + E +
Sbjct: 70 FGTGGGFPGIPLAIVFPECR---FKLIDRTAKKIRVTQEIAAAIGLTNATAEQKAGE--E 124
Query: 138 MITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 125 EWGEYDFVVSRAVMPLPDLMK 145
>gi|254372080|ref|ZP_04987573.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. novicida GA99-3549]
gi|151569811|gb|EDN35465.1| methyltransferase glucose-inhibited cell division protein
[Francisella novicida GA99-3549]
Length = 205
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 16 LNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L+ ++ + +++ + L KW+K N+ + +++ ++H+ DSL V + S
Sbjct: 12 LSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDS 71
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+GGG PG++ +I + L++S KK FL+ V + + RI
Sbjct: 72 T-VDVGTGGGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRI 127
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA + +DT E +L +
Sbjct: 128 ENLE---GNFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|254186500|ref|ZP_04893017.1| methyltransferase GidB [Burkholderia pseudomallei Pasteur 52237]
gi|157934185|gb|EDO89855.1| methyltransferase GidB [Burkholderia pseudomallei Pasteur 52237]
Length = 232
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 10/167 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 18 QALLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIV 77
Query: 67 Q---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 78 PHLGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKL 134
Query: 124 RG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 135 GNLSVVTGRVETLRPGADVSAKFDVIVSRAFADLADFVTLARHLVAP 181
>gi|167740807|ref|ZP_02413581.1| methyltransferase GidB [Burkholderia pseudomallei 14]
Length = 213
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+L +S L + L KW+ NL + ++H+ DSL +
Sbjct: 1 MLSEGAQALGVALSDAQRSALLDYVALLAKWNAVYNLTAIRDPRQMLVQHILDSLSIVPH 60
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 61 LGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGADVPAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|167913141|ref|ZP_02500232.1| methyltransferase GidB [Burkholderia pseudomallei 112]
Length = 213
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 1 MLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH 60
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 61 LGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDIVHKKSAFQNQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGADVSAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|217968662|ref|YP_002353896.1| 16S rRNA methyltransferase GidB [Thauera sp. MZ1T]
gi|217505989|gb|ACK53000.1| methyltransferase GidB [Thauera sp. MZ1T]
Length = 240
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+ + L + +ET+++L F L LKW+K NL + + ++ H+ D
Sbjct: 27 RLQPYAARLADGIAALGLALPQETIDRLLAFGELLLKWNKVYNLTAIRSPQELITHHLLD 86
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL V + D+GSGGG PG++ +I + +V+ IE+ KKASF + +
Sbjct: 87 SLAVLPQLEAVNRLADIGSGGGLPGVVLAIVRPGL---VVSSIETVGKKASFQQQAKIEL 143
Query: 122 AARG-KVFACRIQEAPQMI---TTCDVISARALADLDTLLEYSFPWLYQ 166
V R+++ + +RA + L + S + +
Sbjct: 144 GLDNFSVLNQRVEQVRPQSLPGGAPEGAISRAFSSLADFVALSGHLVAE 192
>gi|332524942|ref|ZP_08401128.1| 16S rRNA methyltransferase GidB [Rubrivivax benzoatilyticus JA2]
gi|332108237|gb|EGJ09461.1| 16S rRNA methyltransferase GidB [Rubrivivax benzoatilyticus JA2]
Length = 207
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSI 74
V+ +E LE + L +W+ NL + +H+ D L V +
Sbjct: 14 GLEVTPGQVEALERYLALLQRWNATYNLTAVRDPAQMLTQHLADCLAVVKPLAARLPAGR 73
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+D+GSGGG PG++ +I G V +++ KKA+F+R + R + R++
Sbjct: 74 VLDVGSGGGLPGVVLAIM-----GWDVTCVDTVGKKAAFIRQAAAELRLPRLQAQHARVE 128
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV+++RA + L + + L
Sbjct: 129 QLKA--APFDVVTSRAFSSLADFVTLTSALLKP 159
>gi|315635267|ref|ZP_07890544.1| glucose inhibited division protein B [Aggregatibacter segnis ATCC
33393]
gi|315476013|gb|EFU66768.1| glucose inhibited division protein B [Aggregatibacter segnis ATCC
33393]
Length = 209
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S ++ ++H+ DS+ V + +ID+G+G G PG+ +I +
Sbjct: 40 KWNKAYNLTSVRDPQEMLVKHILDSIVVSPYL-QGNRFIDVGTGPGLPGLPLAIVNPQKQ 98
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
L++S K+ SF+R +++ E D + +RA A L +
Sbjct: 99 ---FVLLDSLGKRISFIRNAIRELGLTNVEPVLSRVEDYHPDHQFDGVLSRAFASLKDMT 155
Query: 158 EYSFPW 163
E+
Sbjct: 156 EWCHHL 161
>gi|302872908|ref|YP_003841544.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
gi|302575767|gb|ADL43558.1| methyltransferase GidB [Caldicellulosiruptor obsidiansis OB47]
Length = 238
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSG 81
+ F L+ +K NL + E+F ++H+ DSL + + + ID+GSG
Sbjct: 21 QLFIKFMNFVLEKNKLFNLTAIEDEEEFVLKHIADSLSLIKFVEEECSNQNPVAIDIGSG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ---EAPQ 137
G PGI I + ++ + L +S KK +F+ V+ V R + + +
Sbjct: 81 FGAPGIFIKIAMPNMN---MFLNDSNKKKCNFMTEAVKMLGISSVNVVCERAEVLGKKEE 137
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
D + ARA+ L+ L EY+ P L
Sbjct: 138 FRERFDFVFARAVDSLNVLCEYALPLLK 165
>gi|328676167|gb|AEB27037.1| Ribosomal RNA small subunit methyltransferase G [Francisella cf.
novicida Fx1]
Length = 202
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +++ + L KW+K N+ + +++ ++H+ DSL V + S +D+G+G
Sbjct: 17 TEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTG 75
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
GG PG++ +I + L++S KK FL+ V + + RI+
Sbjct: 76 GGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRIENLE---G 129
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E +L +
Sbjct: 130 NFDNIISRAFSSVDTFYELCKHFLTE 155
>gi|257124928|ref|YP_003163042.1| methyltransferase GidB [Leptotrichia buccalis C-1013-b]
gi|257048867|gb|ACV38051.1| methyltransferase GidB [Leptotrichia buccalis C-1013-b]
Length = 240
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 13 NYLLNTYNVSR-----ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
Y LN + S E + ++ F L ++ +NL + + +H DSL + +
Sbjct: 12 EYFLNLLSKSEIKMPNEKITQMLKFLELLYNKNQIMNLTAIRDKKGMLEKHFIDSLLLTK 71
Query: 68 LH-PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +ID+G+G GFPG++ +I + L++S KK F+ V+++ +
Sbjct: 72 VINDDEKSFIDVGTGAGFPGLVLAIYYPEKK---YLLVDSVRKKIEFINEVIKELNLQNV 128
Query: 127 VFA-CRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + DV R +A+L +LEY P++
Sbjct: 129 TTSFERSEELIKDKRESFDVALCRGVANLRIILEYMIPFIK 169
>gi|89255506|ref|YP_512867.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica LVS]
gi|115314026|ref|YP_762749.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica OSU18]
gi|156501436|ref|YP_001427501.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167009351|ref|ZP_02274282.1| methyltransferase GidB [Francisella tularensis subsp. holarctica
FSC200]
gi|167010276|ref|ZP_02275207.1| methyltransferase GidB [Francisella tularensis subsp. holarctica
FSC200]
gi|208780015|ref|ZP_03247358.1| methyltransferase GidB [Francisella novicida FTG]
gi|254366932|ref|ZP_04982969.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica 257]
gi|290954265|ref|ZP_06558886.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica URFT1]
gi|295312329|ref|ZP_06803116.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
holarctica URFT1]
gi|122325911|sp|Q0BP72|RSMG_FRATO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122501364|sp|Q2A5Y4|RSMG_FRATH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224588|sp|A7N992|RSMG_FRATF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89143337|emb|CAJ78500.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica LVS]
gi|115128925|gb|ABI82112.1| glucose-inhibited cell division protein [Francisella tularensis
subsp. holarctica OSU18]
gi|134252759|gb|EBA51853.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica 257]
gi|156252039|gb|ABU60545.1| methyltransferase/glucose inhibited cell division protein B
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|208744019|gb|EDZ90320.1| methyltransferase GidB [Francisella novicida FTG]
Length = 205
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +++ + L KW+K N+ + +++ ++H+ DSL V + S +D+G+G
Sbjct: 20 TEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTG 78
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
GG PG++ +I + L++S KK FL+ V + + RI+
Sbjct: 79 GGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRIENLE---G 132
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E +L +
Sbjct: 133 NFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|300791160|ref|YP_003771451.1| glucose inhibited division protein B [Amycolatopsis mediterranei
U32]
gi|299800674|gb|ADJ51049.1| glucose inhibited division protein B [Amycolatopsis mediterranei
U32]
Length = 227
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +++ + L + + L+ VE W RHV +S + + P + +D+GSG G
Sbjct: 20 ERVDQAAGYVELLERHGIERGLIGPREVERLWERHVLNSAVIGEQMPPGARVVDVGSGAG 79
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PG+ +I ++ + L+E ++ +L V +K + R +E P + +
Sbjct: 80 LPGVPLAIARPDLD---IVLLEPMARRVDWLAEVAEKLELPIAIIRGRAEEPPVREQLGG 136
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D+++ARA+A L L ++ P +
Sbjct: 137 ADIVTARAVAPLARLADWCLPLVRP 161
>gi|167904863|ref|ZP_02492068.1| methyltransferase GidB [Burkholderia pseudomallei NCTC 13177]
Length = 213
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ- 67
+L +S L + L KW+ NL + I+H+ DSL +
Sbjct: 1 MLSEGAQALGVALSDAQRGALLDYVALLAKWNAVYNLTAIRDPRQMLIQHILDSLSIVPH 60
Query: 68 --LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + +D+GSGGG PG++ +I L V L + +KK++F +
Sbjct: 61 LGAHGAAAAALDVGSGGGLPGVVLAIALPGWR---VTLNDVVHKKSAFQNQAKAELKLGN 117
Query: 126 -KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++ + DVI +RA ADL + + +
Sbjct: 118 LSVVTGRVETLRPGADVSAKFDVIVSRAFADLADFVTLARHLVAP 162
>gi|193215519|ref|YP_001996718.1| 16S rRNA methyltransferase GidB [Chloroherpeton thalassium ATCC
35110]
gi|193088996|gb|ACF14271.1| methyltransferase GidB [Chloroherpeton thalassium ATCC 35110]
Length = 217
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSI 74
+ +S LE+L + + L+W++ +NLVS ++H+ SL + H +
Sbjct: 16 HGAELSNAQLERLWNYAEMILEWNQNVNLVSRKDAHTVMLKHILHSLTMGFFHAFKTDES 75
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
+D+G+GGG PGI +I LI+S KK + R + + + + R +
Sbjct: 76 VLDIGTGGGLPGIPLAIAYPETR---FLLIDSVGKKINATRDMAMRLGLKNVRTLKARAE 132
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + + +R + L L +++ P L
Sbjct: 133 DLKK--EKFHTVVSRQVTTLKKLCDWARPLLMD 163
>gi|146297754|ref|YP_001181525.1| methyltransferase GidB [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|189039490|sp|A4XN49|RSMG_CALS8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145411330|gb|ABP68334.1| 16S rRNA m(7)G-527 methyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 253
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 12 ANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ +L Y++ S E L F L L+ +K NL + ++F I+H+ DSL + +
Sbjct: 19 LDRVLEFYSIKNSSVVKELLLRFMKLVLEKNKHFNLTAIENEDEFVIKHIADSLSLIRFL 78
Query: 70 PYPS----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+GSG G PGI I SI + L +S KK +F+ G
Sbjct: 79 QNSDGKLVRAVDIGSGFGVPGIPVKIAKPSI---SLVLNDSNKKKCNFMNEAKDHLGLSG 135
Query: 126 -KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+V R +E + + D ARA+ L+ L EY+ P L
Sbjct: 136 IEVVCQRAEELGKEVEFRESFDFAFARAVDKLNVLCEYALPLLK 179
>gi|167629163|ref|YP_001679662.1| methyltransferase gidb [Heliobacterium modesticaldum Ice1]
gi|167591903|gb|ABZ83651.1| methyltransferase gidb [Heliobacterium modesticaldum Ice1]
Length = 257
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 9/165 (5%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLR 64
L V + ++ + + + +NL + + + +H D S
Sbjct: 22 RQQLDKGLQAWGIAVLPDFIDHCTTYAEALVATNAHLNLTAITDPDGVAEKHFVDSLSPL 81
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ L P ID+G+G GFPG+ ++ V L++S NK+ FL ++
Sbjct: 82 LLNLPNGPVTAIDVGTGAGFPGLPLALIRPQWR---VTLLDSLNKRCRFLSETTERLGLT 138
Query: 125 GK-VFACRIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++ P + ++ +RA+A L LLE P++
Sbjct: 139 NVQILHGRAEDSARNPLLRDKYSIVVSRAVARLPVLLELCLPFVT 183
>gi|56708696|ref|YP_170592.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110671168|ref|YP_667725.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis FSC198]
gi|224457904|ref|ZP_03666377.1| glucose-inhibited division protein B [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254368470|ref|ZP_04984487.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica FSC022]
gi|254371326|ref|ZP_04987328.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC033]
gi|254875570|ref|ZP_05248280.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|81597046|sp|Q5NEF0|RSMG_FRATT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122970832|sp|Q14FV3|RSMG_FRAT1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56605188|emb|CAG46320.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110321501|emb|CAL09703.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC198]
gi|151569566|gb|EDN35220.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis FSC033]
gi|157121364|gb|EDO65565.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. holarctica FSC022]
gi|254841569|gb|EET20005.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|282159946|gb|ADA79337.1| methyltransferase glucose-inhibited cell division protein
[Francisella tularensis subsp. tularensis NE061598]
Length = 205
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +++ + L KW+K N+ + +++ ++H+ DSL V + S +D+G+G
Sbjct: 20 TEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTG 78
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
GG PG++ +I + L++S KK FL+ V + + RI+
Sbjct: 79 GGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRIENLE---G 132
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E +L +
Sbjct: 133 NFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|34557261|ref|NP_907076.1| 16S rRNA methyltransferase GidB [Wolinella succinogenes DSM 1740]
gi|55976473|sp|Q7M9J8|RSMG_WOLSU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|34482977|emb|CAE09976.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Wolinella succinogenes]
Length = 193
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 12 ANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ L TY++ + LE+LE + L L+W++ NL + ++ H+ DSL +
Sbjct: 4 LKHQLKTYHIPFDDQMLERLERYTALLLEWNRAHNLTGAKNSQEV-EEHLIDSLYPLRFL 62
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P D+G+G GFPG+I +I L +LIE K+ +FL Y V +
Sbjct: 63 PPFDSCADIGTGAGFPGLILAIALPKSH---FDLIEPLKKRVAFLHYCVMELGLSNVSIH 119
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ EA + D+I++RA+ TLL + P +
Sbjct: 120 AKRIEALTLEAP-DLITSRAVTSTQTLLSLARPLIAP 155
>gi|254391434|ref|ZP_05006636.1| methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|294813734|ref|ZP_06772377.1| Methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|197705123|gb|EDY50935.1| methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
gi|294326333|gb|EFG07976.1| Methyltransferase gidB [Streptomyces clavuligerus ATCC 27064]
Length = 248
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 9/172 (5%)
Query: 1 MKYCDSNSILRANYLLNTY-----NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFW 55
M+Y + + A L V E + + L + L+ V W
Sbjct: 1 MRYGRTVPVTEAAQELPQAPDAARTVFGEFFPEAVRYAELLADAGVRRGLIGPREVPRLW 60
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL+
Sbjct: 61 ERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRPDLK---ITLLEPLLRRTNFLQ 117
Query: 116 YVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
VV+ V R +E + V++ARA+A LD L + P L
Sbjct: 118 EVVELLGLDHVTVVRGRAEEVLGKLPPVHVVTARAVAPLDRLAGWGVPLLRP 169
>gi|83944971|ref|ZP_00957337.1| glucose inhibited division protein B, putative [Oceanicaulis
alexandrii HTCC2633]
gi|83851753|gb|EAP89608.1| glucose inhibited division protein B, putative [Oceanicaulis
alexandrii HTCC2633]
Length = 212
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
VSRETLE+ E + L + S NLV T+ +FW RH DS +VF+L P
Sbjct: 9 EQFQAETGVSRETLERFETWRRLLEETSAHTNLVGRGTLTEFWHRHALDSWQVFELMPEA 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEG--GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
W DLG+G GFPG+ + L G V +++S KK +F+ V+++T A A
Sbjct: 69 RRWADLGAGAGFPGLAIAFALMERHAGKGHVLMVDSVAKKMAFVNQVIRETKAPAIARAD 128
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ + DV++ARA+A L LL Y P++ +
Sbjct: 129 RVESIHPVPE-VDVVTARAMAPLGKLLGYVHPFVDK 163
>gi|225011500|ref|ZP_03701938.1| methyltransferase GidB [Flavobacteria bacterium MS024-2A]
gi|225004003|gb|EEG41975.1| methyltransferase GidB [Flavobacteria bacterium MS024-2A]
Length = 215
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N+S + L + + L+ W+ KINL+S ++ F+ RHV SL + ++ + + +D
Sbjct: 20 NISEQQLNQFKLLAPLYEDWNTKINLISRKDMDSFFERHVLHSLGIAKVMEFLPQAKVLD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGGFPGI +I LI+S KK ++ V + + A
Sbjct: 80 VGTGGGFPGIPLAILFPETH---FFLIDSIGKKIKVVQEVSNVLKLKN--VSSAHIRAED 134
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
D + +RA+ ++T + PW+ +
Sbjct: 135 FSEKIDFVVSRAVTKMETFV----PWVKK 159
>gi|325278905|ref|YP_004251447.1| Ribosomal RNA small subunit methyltransferase G [Odoribacter
splanchnicus DSM 20712]
gi|324310714|gb|ADY31267.1| Ribosomal RNA small subunit methyltransferase G [Odoribacter
splanchnicus DSM 20712]
Length = 209
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ E E+ L+ +W++KIN++S +++FW+ HV SL + ++ + + +D
Sbjct: 13 ELTEEQRERFARLEGLYREWNEKINVISRKDMDEFWVHHVLHSLAIAKIIRFAPGTRVMD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+GGGFPGI +I + LI+S KK + + + R++
Sbjct: 73 VGTGGGFPGIPLAILFPEVN---FYLIDSIGKKIKVVEGIRDALGLQHVRTEQIRVENVA 129
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ D I +RA+ ++
Sbjct: 130 EQQ---DFIVSRAVTAFPAFVKL 149
>gi|226357390|ref|YP_002787130.1| 16S rRNA methyltransferase GidB [Deinococcus deserti VCD115]
gi|259495492|sp|C1D0A7|RSMG_DEIDV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|226319380|gb|ACO47376.1| putative methyltransferase (Glucose-inhibited division protein B)
[Deinococcus deserti VCD115]
Length = 244
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 10/168 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++ +L A +V+ L++ L + + + NL + T D ++H DSL
Sbjct: 4 EATELLLAGAQELGLDVAP-VLDQFAALLVLLQEGNARFNLTALKTERDIVLKHFVDSLT 62
Query: 65 VF--QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+DLG+G GFP + ++ + ++ V +S KK F+R +
Sbjct: 63 CLGGGHLDGNHQVVDLGTGAGFPTLPLALMRAELQFTPV---DSTRKKVEFVRATAEALG 119
Query: 123 ARG-KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + A R + P+ D + RA+A L L E + P+L
Sbjct: 120 LQNVRPVAGRAETLTRQPEHRDRYDRVVVRAVAALPILAELALPFLRP 167
>gi|288802193|ref|ZP_06407633.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica D18]
gi|288335160|gb|EFC73595.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica D18]
Length = 207
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ + E+ L+ W+ KIN++S +++ + H+ SL + + + + +D
Sbjct: 11 QLTPKQEEQFAALDALYHDWNAKINVISRKDIDNLYEHHILHSLAIAKYINFREGTNVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
G+GGGFPG+ +I LI+ KK + + + R +E
Sbjct: 71 FGTGGGFPGVPLAIFFPEAN---FKLIDGTGKKIRVAQEIADAIGLENVLPSHLRGEE-- 125
Query: 137 QMITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 126 -EKGKFDFIVSRAVMPLPDLMK 146
>gi|302346583|ref|YP_003814881.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica ATCC
25845]
gi|302150647|gb|ADK96908.1| 16S rRNA methyltransferase GidB [Prevotella melaninogenica ATCC
25845]
Length = 207
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ + E+ L+ W+ KIN++S +++ + H+ SL + + + + +D
Sbjct: 11 QLTPKQEEQFAALDALYHDWNAKINVISRKDIDNLYEHHILHSLAIAKCINFREGTNVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
G+GGGFPG+ +I LI+ KK + V + R +E
Sbjct: 71 FGTGGGFPGVPLAIFFPEAN---FKLIDGTGKKVRVAQEVADAIGLENVLPSHLRGEE-- 125
Query: 137 QMITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 126 -EKGKFDFIVSRAVMPLPDLMK 146
>gi|54112557|gb|AAV28912.1| NT02FT1550 [synthetic construct]
Length = 205
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +++ + L KW+K N+ + +++ ++H+ DSL V + S +D+G+G
Sbjct: 20 TEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTG 78
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
GG PG++ +I + L++S KK FL+ V + + RI+
Sbjct: 79 GGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRIENLE---G 132
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E +L +
Sbjct: 133 NFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|51894468|ref|YP_077159.1| glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
gi|81610303|sp|Q67J35|RSMG_SYMTH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51858157|dbj|BAD42315.1| Glucose inhibited division protein B [Symbiobacterium thermophilum
IAM 14863]
Length = 246
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 16/175 (9%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M +L +E + L +W++++NL + + ++ I+H
Sbjct: 1 MDATAYRGLLEEGLASLGVEAEPGGVEAVLLHLDLVREWNERMNLTAITDPQEMVIKHAL 60
Query: 61 DS---LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
D+ L V + P ID+G+G GFPG++ I+ + L+ES K+ FL V
Sbjct: 61 DAASGLAVAGVEP-GQRVIDVGTGAGFPGVVWKCLRPGID---LTLLESLQKRCRFLEEV 116
Query: 118 VQKT------AARGKVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPW 163
Q +V R ++ P D+++ARA+A+L L EY P
Sbjct: 117 GQAVIGPLAGGEGYQVVWGRAEDVGRNPAHRERYDLVTARAVAELRVLAEYCLPL 171
>gi|134302726|ref|YP_001122694.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
tularensis WY96-3418]
gi|166224590|sp|A4J072|RSMG_FRATW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|134050503|gb|ABO47574.1| Methyltransferase gidB (glucose- inhibited division protein B)
[Francisella tularensis subsp. tularensis WY96-3418]
Length = 205
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +++ + L KW+K N+ + +++ ++H+ DSL V + S +D+G+G
Sbjct: 20 TEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTG 78
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
GG PG++ +I + L++S KK FL+ V + + RI+
Sbjct: 79 GGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRIENLE---G 132
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E +L +
Sbjct: 133 NFDNIISRAFSSVDTFYELCKHFLTE 158
>gi|254417639|ref|ZP_05031373.1| methyltransferase GidB [Microcoleus chthonoplastes PCC 7420]
gi|196175557|gb|EDX70587.1| methyltransferase GidB [Microcoleus chthonoplastes PCC 7420]
Length = 224
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPS 73
+ + ++ + Y L ++++NL + ++FW +H+ DSL + P
Sbjct: 14 NWQPTESQHQQFQRLYAGILAGNRQLNLTRITQPDEFWEKHLWDSLRGVASLLSGEEKPL 73
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
ID+G+G GFPG+ +I L S V L++S KK +FL ++ + A R
Sbjct: 74 NIIDIGTGAGFPGLPVAIALPS---SSVTLLDSTRKKITFLDSLIPQLAIPNATTVLGRA 130
Query: 133 QEAPQMI---TTCDVISARALADLDTLLEYSFPWLY 165
++ Q D+ RA+ +Y+ P++
Sbjct: 131 EKVGQQRQHHQRYDIALVRAVGSASACADYALPFVK 166
>gi|126659305|ref|ZP_01730441.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
gi|126619387|gb|EAZ90120.1| glucose-inhibited division protein B [Cyanothece sp. CCY0110]
Length = 241
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSI 74
+ ++E LEK E Y L +++INL + ++FW +H+ DSL Y
Sbjct: 15 QWQPTQEQLEKWEILYQEILLINRQINLTRITEPQEFWEKHLWDSLAGVIGLDFLNYKDS 74
Query: 75 W--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG+ SI + + L++S KK + ++ + R
Sbjct: 75 LKVIDIGTGAGFPGLPISIIFPHWQ---LTLLDSTQKKIKVINLFLEALKLSNSQTVVGR 131
Query: 132 IQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ PQ D+ RA+ + EY P+L
Sbjct: 132 AEAIGHLPQHREKYDLGLIRAVGEPSVCAEYVLPFLK 168
>gi|282860258|ref|ZP_06269329.1| 16S rRNA methyltransferase GidB [Prevotella bivia JCVIHMP010]
gi|282586991|gb|EFB92225.1| 16S rRNA methyltransferase GidB [Prevotella bivia JCVIHMP010]
Length = 208
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWID 77
++S + ++ Y L+ W+ KIN++S +++ + HV SL + + + +D
Sbjct: 12 SLSEKQTKQFGMLYELYQDWNAKINVISRKDIDNLYEHHVLHSLAIAKMLHFKEGTNILD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
G+GGGFPGI +I +I+ KK + + R +E
Sbjct: 72 FGTGGGFPGIPLAIMFPEAN---FKMIDGTGKKIKVASEIGNSIGLDNILPMHLRGEE-- 126
Query: 137 QMITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 127 -EKGKFDFIVSRAVMPLPDLMK 147
>gi|119513128|ref|ZP_01632180.1| glucose-inhibited division protein B [Nodularia spumigena CCY9414]
gi|119462225|gb|EAW43210.1| glucose-inhibited division protein B [Nodularia spumigena CCY9414]
Length = 246
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-------RVFQLHPYPSIWIDLGSGGGF 84
Y L + ++++NL + +DFW +H+ DSL + + ID+G+G GF
Sbjct: 31 LYELIVLGNQQLNLTRITDPQDFWEKHLWDSLRGIAPQGQFIPSLSENASIIDIGTGAGF 90
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA---PQMIT 140
PGI +I + + + L++S KK +F+ + + K R +E PQ
Sbjct: 91 PGIPVAITVPNC---TITLLDSTRKKINFINETLTQLTLSNAKTLVGRAEEIGHHPQHRK 147
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
T D+ RA+++ EY+ P L
Sbjct: 148 TYDIALIRAVSNAAVCAEYTLPLLK 172
>gi|312128797|ref|YP_003993671.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
gi|311778816|gb|ADQ08302.1| methyltransferase GidB [Caldicellulosiruptor hydrothermalis 108]
Length = 238
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-----WIDLGSG 81
+ L + L L+ ++ NL + E+F I+H+ DSL + + + ID+GSG
Sbjct: 21 QLLIKYMNLVLEKNRLFNLTAIENEEEFVIKHIADSLSLLKFIEEENTNQNPVAIDIGSG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQ 137
G PG+ I + S+ + L +S KK F+ + G V R + +
Sbjct: 81 FGAPGLFVKIAMPSLN---IFLNDSNKKKCKFMVDAKESLGISGVNVVCERAEVLGRKEE 137
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
D + ARA+ L+ L EY+ P L
Sbjct: 138 FREKFDFVFARAVDRLNVLCEYALPLLK 165
>gi|95929979|ref|ZP_01312719.1| methyltransferase GidB [Desulfuromonas acetoxidans DSM 684]
gi|95133948|gb|EAT15607.1| methyltransferase GidB [Desulfuromonas acetoxidans DSM 684]
Length = 219
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L +S E E ++ + L W++KINL + W +H+ DSL + + S
Sbjct: 9 CLPPMLQLSSEQYELIDQYLDELLVWNRKINLTAIRQKNICWQKHIIDSLMLGEFIDPDS 68
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
+D+GSG G P I I + V +++ +KK F ++ V+K + + RI
Sbjct: 69 CLLDIGSGAGLPSIPLKIFYPQL---SVTSVDTVSKKIQFQKHCVRKLHLTHYQALSTRI 125
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q I++RA + L + S +L
Sbjct: 126 EHLNGQSQQRYPYITSRAFSSLAQFCQLSHHYLAD 160
>gi|307152663|ref|YP_003888047.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
gi|306982891|gb|ADN14772.1| methyltransferase GidB [Cyanothece sp. PCC 7822]
Length = 243
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 10/154 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIW 75
+ + + K + Y L ++++NL E+FW +H+ DSL L
Sbjct: 20 WQPNEQQQAKFQRLYTEILLANRQLNLTRIIEPEEFWEKHLWDSLSGVVHLGLKTDNLSV 79
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ- 133
ID+G+G GFPG+ +I G V L++S KK FL +V + R++
Sbjct: 80 IDIGTGAGFPGVPVAIAFP---GWTVTLLDSVQKKMVFLNSLVSAMELENTSLLTERVEM 136
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D+ RA+A EY+ P L
Sbjct: 137 IAQDKKYRESYDISLIRAVASASICAEYALPLLK 170
>gi|30250396|ref|NP_842466.1| glucose inhibited division protein [Nitrosomonas europaea ATCC
19718]
gi|38257430|sp|Q82S79|RSMG_NITEU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|30181191|emb|CAD86387.1| Glucose inhibited division protein [Nitrosomonas europaea ATCC
19718]
Length = 214
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L KW+ NL S E RH+ DSL + P +D+GSG GFPGI
Sbjct: 27 RLLRYIELIAKWNSTHNLTSVRNPESMITRHMLDSLVILPHVSGPG-IVDVGSGAGFPGI 85
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
++ + V L+ES KKA+FL V + V R+++ ++ D +
Sbjct: 86 PVALARPEWQ---VTLVESNQKKAAFLLQAVLELGLPNISVKQGRVEKI-KLENKVDTVV 141
Query: 147 ARALADLDTLLEYS 160
+RA + L+ + S
Sbjct: 142 SRAFSSLERFMSLS 155
>gi|255324012|ref|ZP_05365137.1| 16S rRNA methyltransferase GidB [Corynebacterium tuberculostearicum
SK141]
gi|255298869|gb|EET78161.1| 16S rRNA methyltransferase GidB [Corynebacterium tuberculostearicum
SK141]
Length = 202
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + V Q P + ID+GSG G PGI
Sbjct: 18 QAYHDSLATDGSTRGFIGPREVPRLWERHIINCAVVKQAIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVIS 146
+I ++ + LIE K+ ++L VV++ V R +E P + + DV++
Sbjct: 78 AIARPDLQ---ITLIEPLLKRYNYLNEVVEELGLDNVTVLRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|187930941|ref|YP_001890925.1| 16S rRNA methyltransferase GidB [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187711850|gb|ACD30147.1| methyltransferase GidB [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 202
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ +++ + L KW+K N+ + +++ ++H+ DSL V + S +D+G+G
Sbjct: 17 TEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDST-VDVGTG 75
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
GG PG++ +I + L++S KK FL+ V + + RI+
Sbjct: 76 GGLPGVVLAILYPQHQ---FTLVDSVGKKIMFLKNVKKNLSLNNINPLNTRIENLE---G 129
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
D I +RA + +DT E +L +
Sbjct: 130 NFDNIISRAFSSVDTFYELCKHFLTE 155
>gi|283780179|ref|YP_003370934.1| methyltransferase GidB [Pirellula staleyi DSM 6068]
gi|283438632|gb|ADB17074.1| methyltransferase GidB [Pirellula staleyi DSM 6068]
Length = 255
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N +R ++ + T++KL+ + L +W++KINL + E F R V D++ +
Sbjct: 41 PNDTMRDALARHSIQLPDATIDKLDLYCKLLWEWNEKINLTRHTDYERFVSRDVVDTMHL 100
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+L +D+GSGGG PGI +I ++ + L ++ KK + LR +V+K
Sbjct: 101 AKLLRESEEVLDVGSGGGVPGITLAIVRPDLQ---MTLSDNTGKKVNVLRDMVEKLGLEC 157
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R ++ D ++ RA+ LD LL + P+
Sbjct: 158 AALNFRSEDLLDE-NRFDALTIRAVGPLDRLLTWFKPY 194
>gi|325954874|ref|YP_004238534.1| ribosomal RNA small subunit methyltransferase G [Weeksella virosa
DSM 16922]
gi|323437492|gb|ADX67956.1| Ribosomal RNA small subunit methyltransferase G [Weeksella virosa
DSM 16922]
Length = 209
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++++ +E+L L+ +W+++IN+VS ++ ++ H+ SL + ++ + S +D
Sbjct: 11 SLTKKQIEQLSRLGDLYKEWNEQINVVSRKDIDKLYVNHILHSLAIAKVMEFTDGSKVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGG PGI +I ++ +L++S KK + + + A
Sbjct: 71 VGTGGGLPGIPLAILFPNVH---FHLVDSIGKKIKVVHAIATSLGLEN--VKAEQKRAES 125
Query: 138 MITTCDVISARALADLDTLLEY 159
+ D + +RA+ + +E+
Sbjct: 126 LTDQYDFVVSRAVTAMPKFVEW 147
>gi|91777102|ref|YP_546858.1| methyltransferase GidB [Methylobacillus flagellatus KT]
gi|123253820|sp|Q1GXM0|RSMG_METFK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91711089|gb|ABE51017.1| 16S rRNA m(7)G-527 methyltransferase [Methylobacillus flagellatus
KT]
Length = 205
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L ++ E EKL + L KW+K NL + ED H+ DSL V
Sbjct: 1 MQQKLETGIRQLGLDLPAEVTEKLLAYLALLAKWNKVHNLTAVRDPEDMVTLHLLDSLSV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P +D+GSG G PGI+ +I ++ V I++ KKASF+R +
Sbjct: 61 LPHVP-SGSLLDVGSGAGLPGIVLAICRPDLQ---VTTIDAVQKKASFMRQAKAELQIDN 116
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+V A R+++ + D + +RA +++ ++ + + +
Sbjct: 117 LQVVAGRVEQF-EPEAPFDTVISRAFSEIALFVKLTRHLMAE 157
>gi|260893977|ref|YP_003240074.1| methyltransferase GidB [Ammonifex degensii KC4]
gi|260866118|gb|ACX53224.1| methyltransferase GidB [Ammonifex degensii KC4]
Length = 241
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S L A ++ EK+ + L W ++ +L + E+ I H DSL
Sbjct: 9 SALEAGLAAFGLSLPPGAQEKMGRHFALLSLWGRRSSLTAIRGAEEAAILHYLDSLAPLA 68
Query: 68 LHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P P ID+GSG GFPG+ ++ L +E L+E+ KK FLR V+++ +
Sbjct: 69 HLPPPEGPCIDVGSGAGFPGVPLALALPEVE---FVLLEATRKKVEFLRRVIEEISLPNC 125
Query: 126 KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
+ R +E + + + ARA+A L L EY+ P++
Sbjct: 126 RAVWGRAEEYGKIAGYRESFAWVVARAVAPLRELAEYTLPFVR 168
>gi|239813065|ref|YP_002941975.1| 16S rRNA methyltransferase GidB [Variovorax paradoxus S110]
gi|239799642|gb|ACS16709.1| methyltransferase GidB [Variovorax paradoxus S110]
Length = 213
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
LR +S E+L + L LKW+K NL + H+ DSL
Sbjct: 6 DTLRQGAAALGTALSDAQAEQLLAYGTLMLKWNKVYNLTALRDPASVLTHHLLDSLAAVA 65
Query: 68 LHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+GSGGG PG++ ++ +E V+ +++ KKA+F++ V +
Sbjct: 66 PLQREWAGKGKLLDVGSGGGLPGVVIAVLRPDLE---VSCLDAVAKKAAFVQQVAAELEL 122
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ R++ + + +VIS+RA A L S L
Sbjct: 123 PNLRGLHARVE---SLTGSYEVISSRAFASLPDFFNGSRHLLAP 163
>gi|298372526|ref|ZP_06982516.1| 16S rRNA methyltransferase GidB [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275430|gb|EFI16981.1| 16S rRNA methyltransferase GidB [Bacteroidetes oral taxon 274 str.
F0058]
Length = 206
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ + + L+ W+ KIN++S +E+ ++ HV SL + ++ + + ID
Sbjct: 10 HLTEQQTVMFAALFDLYADWNAKINVISRKDIENLYLHHVLHSLAIAKIIDFRPGTNIID 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGGFPGI +I L++S KK V FA + E
Sbjct: 70 VGTGGGFPGIPLAIMFPECR---FCLLDSVGKKIKVASEVASALGLANCTFAHKRME--D 124
Query: 138 MITTCDVISARALADLDTLLE 158
+ +RA+ L L++
Sbjct: 125 ERGLFEFAVSRAVMPLSDLVK 145
>gi|193211880|ref|YP_001997833.1| 16S rRNA methyltransferase GidB [Chlorobaculum parvum NCIB 8327]
gi|193085357|gb|ACF10633.1| methyltransferase GidB [Chlorobaculum parvum NCIB 8327]
Length = 244
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 2 KYCDSNSILRANYLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
+Y N + L + + E L+ L + L +W+ K+NL+S ++HV
Sbjct: 25 RYVMPNDLQLLERLCREHGIPAEKNALKLLVRYTELLEEWNHKVNLISRKEDAPVIVKHV 84
Query: 60 EDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
S+ + ++H + +DLG+GGG PGI +I L++S KK + + +
Sbjct: 85 FHSMLISRIHDFKPGEKVLDLGTGGGLPGIPLAILFPET---SFLLVDSTGKKIAACKAM 141
Query: 118 VQKTAARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+++ R++E +I D + +R +A L+ L Y L +
Sbjct: 142 IKELGLGNVMAVHSRVEELRGVI--FDTVLSRQVAPLEELCSYCTTLLKR 189
>gi|148284582|ref|YP_001248672.1| glucose-inhibited division protein B [Orientia tsutsugamushi str.
Boryong]
gi|189045871|sp|A5CDU7|RSMG_ORITB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146740021|emb|CAM80105.1| glucose inhibited division protein [Orientia tsutsugamushi str.
Boryong]
Length = 198
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 9/152 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-HPYPSIWI 76
YNVSRET K + +Y L KW+ INLVS++T+++FW RH+ DS+++ H I
Sbjct: 12 NYNVSRETFNKFKEYYSLLSKWNSTINLVSATTLQNFWQRHIFDSIQLLNYIHNKDIIVA 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
DLGSG GFPG++ SI V LIES ++KA+FL Q + + ++ RIQ
Sbjct: 72 DLGSGAGFPGVVLSISG----IKNVILIESDSRKAAFLLQAAQLSDQKIEIINDRIQ--- 124
Query: 137 QMITTCDVISARALADLDTLLEYSFPW-LYQK 167
+ CD+++ RALA+L T+L ++ + + K
Sbjct: 125 NLKVKCDLVTVRALANLSTILSHTKQFTVKDK 156
>gi|328883708|emb|CCA56947.1| rRNA small subunit methyltransferase, glucose inhibited division
protein GidB [Streptomyces venezuelae ATCC 10712]
Length = 246
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 35 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 94
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E IT V++ARA
Sbjct: 95 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEMLGKITPVHVVTARA 151
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 152 VAPLDRLAGWGVPLLRP 168
>gi|297567554|ref|YP_003686526.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
gi|296852003|gb|ADH65018.1| methyltransferase GidB [Meiothermus silvanus DSM 9946]
Length = 244
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIWIDLG 79
S + LE+L Y L L+ + + NL + + F ++H+ DSL + QL ID+G
Sbjct: 24 SSQQLEQLSRLYDLLLEANTRTNLTAITDERGFVLKHLVDSLTCELSQLLEGQQRVIDVG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---A 135
+G GFPG+ I +++ + L+E+ KK +L Q + + R +E
Sbjct: 84 TGAGFPGLPLKIVKPALD---MTLLEATRKKVEYLDQASQALGLKNIRTLWGRAEEQAHR 140
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
P++ D RA+ T+ E P++
Sbjct: 141 PELREVFDRALVRAVGTTATVAELCLPFVR 170
>gi|312888273|ref|ZP_07747849.1| 16S rRNA m(7)G-527 methyltransferase [Mucilaginibacter paludis DSM
18603]
gi|311299107|gb|EFQ76200.1| 16S rRNA m(7)G-527 methyltransferase [Mucilaginibacter paludis DSM
18603]
Length = 208
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGG 82
+ L++ W+ +IN++S ++ + RHV SL + ++ P+ +D+G+GG
Sbjct: 17 QQSQYARLLDLYIHWNNQINVISRKDIDLLFERHVLHSLGIAKVMPFLPGEQVLDVGTGG 76
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITT 141
GFPGI +I E +L++S KK + V + R +E P
Sbjct: 77 GFPGIPLAIMFPETE---FHLVDSIGKKIKVVTEVAAALGLQNVKASHNRAEEIP---GK 130
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
D + +RA+ L +PW+ K
Sbjct: 131 FDFVVSRAVTQLKDF----YPWVKDK 152
>gi|187476516|ref|YP_784540.1| glucose inhibited division protein B [Bordetella avium 197N]
gi|123515348|sp|Q2L2S3|RSMG_BORA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|115421102|emb|CAJ47586.1| glucose inhibited division protein B [Bordetella avium 197N]
Length = 224
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 12/150 (8%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PYPSIWID 77
E EKL + +W++ NL + E I+H+ DSL V Q P+ D
Sbjct: 28 EQQEKLLRYMAQMQRWNRTYNLTAIRDPEQMLIQHLFDSLSVVQPLVRALQAGQPAKVYD 87
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGG PG++ +I + + +++ KK +F++ + RI+
Sbjct: 88 VGSGGGLPGVVLAIVQPEWD---ITCVDAVEKKTAFVQQMAGTLMLPNLHAMHARIERVA 144
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
CDV+ +RA A L + +
Sbjct: 145 --PADCDVVISRAFASLHDFANLAGRHVRP 172
>gi|311741704|ref|ZP_07715526.1| 16S rRNA methyltransferase GidB [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303225|gb|EFQ79306.1| 16S rRNA methyltransferase GidB [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 202
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + V Q P + ID+GSG G PGI
Sbjct: 18 QAYHDSLATDGSTRGFIGPREVPRLWDRHIINCAVVKQAIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVIS 146
+I ++ + LIE K+ ++L VV++ V R +E P + + DV++
Sbjct: 78 AIARPDLQ---ITLIEPLLKRYNYLNEVVEELGLDNVTVLRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|229495898|ref|ZP_04389624.1| 16S rRNA methyltransferase GidB [Porphyromonas endodontalis ATCC
35406]
gi|229317211|gb|EEN83118.1| 16S rRNA methyltransferase GidB [Porphyromonas endodontalis ATCC
35406]
Length = 213
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
V+ + E+ + L+ W+ KIN++S +++ ++ HV SL V ++ + S ID
Sbjct: 16 EVNEQQREQFAALWELYTDWNSKINVISRKDIDNLYMHHVLHSLGVTKMLHFTAGSHVID 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI +I ++ L++S KK + V + RI+E
Sbjct: 76 VGTGGGFPGIPLAILFPEVQ---FTLVDSIGKKVRVAQSVADSLGLQNVTTHHIRIEE-- 130
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ CD + RA L L++ + ++
Sbjct: 131 -LREKCDFVVTRATMLLGELVKLTRHLFSRE 160
>gi|217967937|ref|YP_002353443.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
gi|217337036|gb|ACK42829.1| methyltransferase GidB [Dictyoglomus turgidum DSM 6724]
Length = 240
Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VF 66
IL+ + EK +Y +W++KINL S E+ ++H DSL +
Sbjct: 7 EILKEKVNELNLKLDPLQEEKFYLYYKALKEWNRKINLTSLEGEEEIILKHFVDSLACII 66
Query: 67 QLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ ID+G+G GFPGI I E + L+ES+ KK FL + +
Sbjct: 67 PIKDENIEKIIDIGTGAGFPGIPLKIYN---EKYKLTLLESQKKKVLFLEEITKILKLSN 123
Query: 126 -KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
++ R + + P+ D+ AR +A +LEY+ P++
Sbjct: 124 VEIIWDRAENLGKNPKYRENFDLALARGVAKPHIVLEYAIPFVK 167
>gi|284038937|ref|YP_003388867.1| methyltransferase GidB [Spirosoma linguale DSM 74]
gi|283818230|gb|ADB40068.1| methyltransferase GidB [Spirosoma linguale DSM 74]
Length = 209
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + N++ E E+ L+ W+ KIN++S ++ + +H+ SL + ++ +
Sbjct: 4 DLILKYFPNLTAEQKEQFAALDGLYRDWNAKINVISRQDIDALYEKHILHSLGIAKIVSF 63
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +D+G+GGGFPGI +I +L++S KK ++ V K
Sbjct: 64 KPGTEILDVGTGGGFPGIPLAILFP---MADFHLVDSIGKKIKVVQEVSDALGLTNAKAE 120
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEY 159
R++ Q+ TT D + +RA+ L L +
Sbjct: 121 QIRVE---QLNTTYDFVVSRAVTRLKPFLGW 148
>gi|182437487|ref|YP_001825206.1| 16S rRNA methyltransferase GidB [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326778142|ref|ZP_08237407.1| Ribosomal RNA small subunit methyltransferase G [Streptomyces cf.
griseus XylebKG-1]
gi|178466003|dbj|BAG20523.1| putative glucose-inhibited division protein B [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326658475|gb|EGE43321.1| Ribosomal RNA small subunit methyltransferase G [Streptomyces cf.
griseus XylebKG-1]
Length = 246
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 8/171 (4%)
Query: 1 MKYCDSNSILRANYLL----NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI 56
M+Y + + L V E + + L K L+ V W
Sbjct: 1 MRYGRTVPVTEPAELPQAPAEAQAVFGELFPEAVRYAELLADAGVKRGLIGPREVPRLWE 60
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL+
Sbjct: 61 RHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRPDLK---ITLLEPLLRRTNFLQE 117
Query: 117 VVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
VV+ V R +E + V++ARA+A LD L + P L
Sbjct: 118 VVELLGLDHVTVVRGRAEEVLGKLQPVHVVTARAVAPLDRLAGWGVPLLKP 168
>gi|149925398|ref|ZP_01913662.1| glucose-inhibited division protein B [Limnobacter sp. MED105]
gi|149825515|gb|EDM84723.1| glucose-inhibited division protein B [Limnobacter sp. MED105]
Length = 225
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L ++ E +L + L KW++ NL + + H+ DSL V
Sbjct: 17 DQDLLEKGIANLRLGLNSEQHAQLFKYGQLIQKWNRVYNLTAIRNNRELITHHLLDSLAV 76
Query: 66 FQLHPYP------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ +D+G+G G PG++ +I + + + LI++ KKA+F++ +
Sbjct: 77 LPEIAFALQATSSPRILDVGAGAGLPGLVLAIAQPNWQ---ITLIDTVQKKAAFMQQAIA 133
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R++E Q D+I +RA + ++ + S L +
Sbjct: 134 TLGLKNAQAVHGRVEEF-QADVPFDLICSRAFSSIENFIALSQHVLAE 180
>gi|317050326|ref|YP_004111442.1| methyltransferase GidB [Desulfurispirillum indicum S5]
gi|316945410|gb|ADU64886.1| methyltransferase GidB [Desulfurispirillum indicum S5]
Length = 203
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ-LHPYPSIWIDLGSG 81
E L E + ++W++ L + + + + RH DS+ L P ++ ID+G G
Sbjct: 14 EELLPLFELYCQELVRWNRAKKLTAITERAEVYDRHFLDSVHGVDGLLPQGALVIDIGCG 73
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
GFPG+ + I V +S +KK +F+R++ +K +G + F R +E Q+
Sbjct: 74 AGFPGLPLKMLRPDIHLIAV---DSISKKIAFVRHMARKLGLQGVECFDRRAEELTQLHA 130
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV++ RA+AD L++ P+L Q
Sbjct: 131 KADVVTFRAVADSALLVKIGLPFLKQ 156
>gi|325104561|ref|YP_004274215.1| 16S rRNA m(7)G-527 methyltransferase [Pedobacter saltans DSM 12145]
gi|324973409|gb|ADY52393.1| 16S rRNA m(7)G-527 methyltransferase [Pedobacter saltans DSM 12145]
Length = 210
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDL 78
++ + E+++ + L+ W+ +IN++S ++ + RH+ SL + ++ + +D+
Sbjct: 13 LNSKQKEQIDKLFDLYFLWNSQINVISRKDIDLLYERHILHSLAIAKVCEFKPGQSVLDV 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+GGGFPGI +I + +L++S KK + V + + K R + Q
Sbjct: 73 GTGGGFPGIPLAILFPETK---FHLVDSIGKKIKVVSEVAKGIGLKNLKATHSRAE---Q 126
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ D + +RA+ L +PW+ K
Sbjct: 127 IDEKFDFVVSRAVTQLKDF----YPWIRDK 152
>gi|301061351|ref|ZP_07202132.1| 16S rRNA methyltransferase GidB [delta proteobacterium NaphS2]
gi|300444546|gb|EFK08530.1| 16S rRNA methyltransferase GidB [delta proteobacterium NaphS2]
Length = 229
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S E L F W++++NL S+ + V DSL P+ + +D+GS
Sbjct: 21 LSSEQKNLLLVFIKELNAWNRRMNLTGLSSKKRILDELVADSLMPHPFLPHTGVCLDVGS 80
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
GGGFP + I +++ L+E +KK SFL++++++ + + P
Sbjct: 81 GGGFPAVPLKICRPNLK---FFLLEPNSKKGSFLKHIIRRCGLKEIAVVRERIDTPSGSL 137
Query: 141 TC---DVISARALADLDTLLEYSFPWL 164
D+I++RA+A L L+ + P+L
Sbjct: 138 PFKAVDIITSRAMAPLPKLINWCTPYL 164
>gi|298490143|ref|YP_003720320.1| methyltransferase GidB ['Nostoc azollae' 0708]
gi|298232061|gb|ADI63197.1| methyltransferase GidB ['Nostoc azollae' 0708]
Length = 251
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSL-------RVFQLHPYPSIWIDLGSGGGFP 85
Y L L+ ++++NL + E+FW +H+ DSL + + ID+G+G GFP
Sbjct: 38 YKLILEGNRQLNLTRITEPEEFWEKHLWDSLKGIAPKQQFIPFLNQNASVIDIGTGAGFP 97
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITT 141
G+ SI S + V L++S KK +F+ V+ + K R++E Q
Sbjct: 98 GVPISIIFLSCQ---VTLLDSTRKKINFIDTVLSNLSLTNAKTLVGRVEEIGQENKHREN 154
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
D+ RA+ EYS P + +
Sbjct: 155 YDLAVIRAVGSASACAEYSLPLVKK 179
>gi|198284889|ref|YP_002221210.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665157|ref|YP_002427569.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249410|gb|ACH85003.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517370|gb|ACK77956.1| methyltransferase GidB [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 221
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Query: 7 NSILRANYLLNTYN--VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++ L A + + V E + L ++ L +W+ NL + + RH+ DSL
Sbjct: 12 HARLNAGLVALGLDRTVGAEQRDLLIHYVALLQRWNATHNLTAVRDPLEMVPRHLLDSLA 71
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V P ++ +D+GSG G PGI +I L+E K+ +FLRY +
Sbjct: 72 VLPYLPEGAV-VDIGSGAGLPGIPLAICCP---AQAFTLVEPAAKRVAFLRYAIADLGLT 127
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTL 156
A + E DVI +RA A L L
Sbjct: 128 NVQVAPQGSEDYHPDLLPDVIISRATAPLARL 159
>gi|322437343|ref|YP_004219555.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX9]
gi|321165070|gb|ADW70775.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX9]
Length = 207
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
A L Y + E + +L + L L+W+ + NL + E+ RH +SL P
Sbjct: 18 AALLAPYYPATDELITQLSDYLDLLLRWNARTNLTAIRDPEEIVTRHFGESLFAAANLPE 77
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +DLGSG GFPG+ + + LV L ES+NKK++FLR ++ + +V A R
Sbjct: 78 GNTLLDLGSGAGFPGLPIQLAHLDL---LVTLAESQNKKSTFLREAIRTLGLKTQVHAAR 134
Query: 132 IQEAPQMITTCDVISARALADLD 154
+ + D+++ RA+ D+
Sbjct: 135 AE---TLTAPFDIVTLRAVDDMQ 154
>gi|289450644|ref|YP_003475557.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289185191|gb|ADC91616.1| 16S rRNA methyltransferase GidB [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 263
Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-------- 72
++ E +KL+ + +K ++ +NL + + D ++H DSL + L
Sbjct: 35 LNPEAKDKLKKYGIELIKTNRMMNLTALTEPIDVAVKHFADSLTLLPLLKNEFSKFASAH 94
Query: 73 ----SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
WID+G+G GFPG+ G ++L++S K+ +FL + + +
Sbjct: 95 AADQYRWIDVGTGAGFPGLPVQAL---ASIGELSLLDSLKKRLAFLNDLAGILSVDNVRY 151
Query: 128 FACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++A + + ARA+A L L E P + Q
Sbjct: 152 IHARAEDAGRDKKYREHYSLAVARAVAPLPILCELCLPLVKQ 193
>gi|313202485|ref|YP_004041143.1| methyltransferase gidb [Methylovorus sp. MP688]
gi|312441801|gb|ADQ85907.1| methyltransferase GidB [Methylovorus sp. MP688]
Length = 194
Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIIT 89
+ L KW+K NL + ++ H+ DSL V PS +D+GSG G PGII
Sbjct: 4 YLALLQKWNKVHNLTAVRDPDEMVTLHLLDSLSVLPHVQALSPSRLLDVGSGAGLPGIIL 63
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
++ + ++ V I++ KKASF+R + +V A R+++ + D++ +R
Sbjct: 64 ALCMPDLK---VTTIDAVQKKASFMRQAKAELGIANLEVIAGRVEQ-HRPSQAYDIVISR 119
Query: 149 ALADLDTLLEYSFPWLYQ 166
A +++ ++ + + +
Sbjct: 120 AFSEIALFIKLTRHLIAE 137
>gi|114571501|ref|YP_758181.1| methyltransferase GidB [Maricaulis maris MCS10]
gi|122314958|sp|Q0AKF0|RSMG_MARMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114341963|gb|ABI67243.1| 16S rRNA m(7)G-527 methyltransferase [Maricaulis maris MCS10]
Length = 207
Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWI 76
VSRETL+ E + L ++ + NLV ST++ FW RH DS ++ + +
Sbjct: 9 ETGVSRETLDGFETWRALLVETNAHTNLVGRSTLDQFWARHAMDSYQLLEHVGADVTKIA 68
Query: 77 DLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLG+G GFPGI ++ + V L++S KK +FLR + A + R++
Sbjct: 69 DLGAGAGFPGIALALGLRDRQQAAHVTLVDSVGKKVAFLRKTIAALALDADARSVRVETL 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
D+I+ARA A L+ LL Y+ P L +
Sbjct: 129 -DPAEGFDLITARAFAPLNKLLGYASPLLKNR 159
>gi|54027642|ref|YP_121884.1| 16S rRNA methyltransferase GidB [Nocardia farcinica IFM 10152]
gi|81602318|sp|Q5YMS1|RSMG_NOCFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|54019150|dbj|BAD60520.1| putative ribosomal RNA small subunit methyltransferase [Nocardia
farcinica IFM 10152]
Length = 260
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+Y + L+ V W RH+ + V +L P + +D+GSG G PGI
Sbjct: 33 RRYYDALATAGVERGLIGPREVPRLWDRHILNCAVVAELMPESATVVDVGSGAGLPGIPL 92
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I + + L+E ++ +FL + V R + + + DV+++
Sbjct: 93 AIARPDLR---ITLVEPLLRRTAFLSEFIDAAGLDITVVRGRAEHSGVIKEAGGADVVTS 149
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L L ++S P L
Sbjct: 150 RAVAPLAKLAQWSLPLLRD 168
>gi|67922987|ref|ZP_00516481.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
gi|67855135|gb|EAM50400.1| Glucose inhibited division protein [Crocosphaera watsonii WH 8501]
Length = 241
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSI 74
+ ++E LE+ E Y + +++INL + DF +H+ DSL Y
Sbjct: 15 QWQPTQEQLEQWEKLYQEIILINRQINLTRITEPNDFLEKHLWDSLAGVIGLDFLNYEDS 74
Query: 75 W--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+D+G+G GFPG+ SI + + L++S KK + ++ ++ + F R
Sbjct: 75 LKVVDIGTGAGFPGLPISIIFPHWQ---LTLLDSTRKKINVIKLFLEALKLNNSQTFIGR 131
Query: 132 IQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
++ P+ D+ RA+ + EY P+L
Sbjct: 132 AEDIGHIPEHREQYDLGLIRAVGEPSVCAEYVLPFLK 168
>gi|46199908|ref|YP_005575.1| glucose inhibited division protein B [Thermus thermophilus HB27]
gi|55976455|sp|Q72H89|RSMG_THET2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46197535|gb|AAS81948.1| glucose inhibited division protein B [Thermus thermophilus HB27]
Length = 249
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++L ++ LE Y L + S K+NL + E+ ++H DSL
Sbjct: 13 RGRALLLEGGKALGLDLKPH-LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLT 71
Query: 65 VFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +L P +DLG+G GFPG+ I +E + L+++ KK +F+ ++
Sbjct: 72 LLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLG 128
Query: 123 ARG-KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+G + R + D ARA+A L L E P+L
Sbjct: 129 LKGARALWGRAEVLAREAGHREAYDRAVARAVAPLCVLSELLLPFL 174
>gi|33591277|ref|NP_878921.1| glucose inhibited division protein B [Bordetella pertussis Tohama
I]
gi|33594725|ref|NP_882368.1| glucose inhibited division protein B [Bordetella parapertussis
12822]
gi|55976491|sp|Q7W0S9|RSMG_BORPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|55976492|sp|Q7W2I0|RSMG_BORPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33564801|emb|CAE39743.1| glucose inhibited division protein B [Bordetella parapertussis]
gi|33570919|emb|CAE40382.1| glucose inhibited division protein B [Bordetella pertussis Tohama
I]
gi|332380679|gb|AEE65526.1| glucose inhibited division protein B [Bordetella pertussis CS]
Length = 230
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 17/168 (10%)
Query: 11 RANYLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R + + + +KL + +W++ NL + ++H+ DSL V
Sbjct: 14 RLAQACDALRLPADAGQQQKLLRYIEQMQRWNRTYNLTAIRDPGQMLVQHLFDSLSVVAP 73
Query: 69 HPYP---------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+GSGGG PG++ +I + + V +++ KK +F+R +
Sbjct: 74 LERGLPAAGSGARVKLFDVGSGGGLPGVVLAIMRAHWD---VTCVDAVEKKTAFVRQMAG 130
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ RI++ CDV+ +RA A L + + + +
Sbjct: 131 ALGLPNLQAAHTRIEQLE--PAQCDVVISRAFASLQDFAKLAGRHVRE 176
>gi|241762352|ref|ZP_04760432.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260753424|ref|YP_003226317.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|241373146|gb|EER62785.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258552787|gb|ACV75733.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 221
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-- 71
+L +SRET+EKL+ F NL++ STV+D W RH+ DS ++ L
Sbjct: 9 WLDQHIGISRETVEKLDAFVACLHAEMAHQNLIARSTVDDLWGRHIIDSAQLLPLARKEA 68
Query: 72 -------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
P W+DLGSG GFPGII +I + V L+ES+ K+ FL +
Sbjct: 69 AFNKKASPKSWLDLGSGAGFPGIIIAI----LSEMAVTLVESRRKRVEFLEKAAEAAGTP 124
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++ D+I+ARA A LD L +FP+ +++
Sbjct: 125 VTILGQRLENIE--PQAFDIITARAFAPLDKLWRLAFPFSHKE 165
>gi|320009744|gb|ADW04594.1| methyltransferase GidB [Streptomyces flavogriseus ATCC 33331]
Length = 238
Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 87 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLNHVTVVRGRAEEVLGTLQPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLRP 160
>gi|257057911|ref|YP_003135743.1| glucose-inhibited division protein B [Saccharomonospora viridis DSM
43017]
gi|256587783|gb|ACU98916.1| glucose-inhibited division protein B [Saccharomonospora viridis DSM
43017]
Length = 225
Score = 143 bits (361), Expect = 8e-33, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F L + L+ V+ W RHV +S V + P + ID+GSG GFPG+ +I
Sbjct: 23 FVELLASHGVERGLIGPREVDRLWDRHVLNSAVVNERIPMGARVIDVGSGAGFPGVPLAI 82
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARA 149
++ + L+E ++ +L VV V R +E + I DV++ARA
Sbjct: 83 ARPDLD---IVLLEPMARRVEWLSEVVDTLDLPVTVERGRAEEKVVRRRIDAADVVTARA 139
Query: 150 LADLDTLLEYSFPWLYQ 166
+A L L ++ P +
Sbjct: 140 VAPLARLSQWCLPLVRP 156
>gi|253582391|ref|ZP_04859614.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
varium ATCC 27725]
gi|251835930|gb|EES64468.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
varium ATCC 27725]
Length = 233
Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + E + L + L +++ NL + + +H DSL +
Sbjct: 1 MREFLLEGIKKLNIEYTDEKINNLIKYLKLLTEYNAHTNLTALRDEKSIIEKHFLDSLLL 60
Query: 66 FQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
L ID+G+G GFPG++ +I +IE L++S KK FL V ++
Sbjct: 61 QNLIKKEFKKAIDIGTGAGFPGMVLAIFNPNIE---FTLMDSIGKKTKFLDLVKERLELH 117
Query: 125 G-KVFACRIQE--APQMITTCDVISARALADLDTLLEYSFPWLY 165
V R ++ + T D+ R ++ L T+LEY P+L
Sbjct: 118 NVTVVTSRAEDYINDENRETYDLGLCRGVSKLGTILEYIIPFLK 161
>gi|225851139|ref|YP_002731373.1| 16S rRNA methyltransferase GidB [Persephonella marina EX-H1]
gi|225645613|gb|ACO03799.1| 16S rRNA methyltransferase GidB [Persephonella marina EX-H1]
Length = 208
Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ N +S + L+K E + + KW++ NL S E+ +H DSL + +L
Sbjct: 5 LKDLCEKNGIFLSDDQLKKFEIYLNMLSKWNRVYNLTSVRRKEEIITKHFFDSLTLVKLF 64
Query: 70 P------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
DLG+G GFPG+ I + LIES KK FL + ++ +
Sbjct: 65 EKEGINVEGKKVADLGAGAGFPGVPVKIYYGE--KIDLYLIESVGKKCIFLEMLKKEISV 122
Query: 124 RGKVFACRIQEAPQMITTCDVISARA 149
KV R +E D++ +RA
Sbjct: 123 DYKVICKRSEEVE---ERFDIVLSRA 145
>gi|188996632|ref|YP_001930883.1| methyltransferase GidB [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931699|gb|ACD66329.1| methyltransferase GidB [Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L+ N ++ +E + + + LKW+K NL S ++ I+H DSL + +L
Sbjct: 4 LLKDLAEKNGIILTDNQIELFDKYISMLLKWNKVYNLTSVRKKDEIVIKHFLDSLTLVKL 63
Query: 69 HP------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D G+G GFPG+ I + LIES NKK FL + ++
Sbjct: 64 FEAKAINVEDKEIADFGTGAGFPGVPLKIYYQD--KIKLYLIESINKKCIFLEMLKKELK 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISARA 149
V R + + D++ +RA
Sbjct: 122 IDYTVLCDRAE---NIDKKFDIVVSRA 145
>gi|315497187|ref|YP_004085991.1| methyltransferase gidb [Asticcacaulis excentricus CB 48]
gi|315415199|gb|ADU11840.1| methyltransferase GidB [Asticcacaulis excentricus CB 48]
Length = 214
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
++V + L+ L F + + ++ +NLV +T+ +W RHV DS ++ P W DL
Sbjct: 12 FHVKQAALDDLTRFAKVLAERNEVMNLVGPATLPHYWSRHVLDSAQLLNHAPDARTWADL 71
Query: 79 GSGGGFPGIITSIQLSSIE--------GGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
G+G GFPG++ +I L + V LI+S K+ FL VV+ V
Sbjct: 72 GAGAGFPGVVLAILLKHLSTDSGETPTDRRVFLIDSLAKRCRFLGEVVRDLDLPATVIND 131
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R + DV++ARA+A L L+ ++ + +
Sbjct: 132 RAENVS---LKVDVVTARAMAPLPKLIGFAESFFRK 164
>gi|56552876|ref|YP_163715.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ZM4]
gi|81598131|sp|Q5NL06|RSMG_ZYMMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56544450|gb|AAV90604.1| methyltransferase GidB [Zymomonas mobilis subsp. mobilis ZM4]
Length = 221
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-- 71
+L +SRET+EKL+ F NL++ STV+D W RH+ DS ++ L
Sbjct: 9 WLDQHIGISRETVEKLDAFVACLHAEMAHQNLIARSTVDDLWGRHIIDSAQLLPLARKEA 68
Query: 72 -------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
P W+DLGSG GFPGII +I + V L+ES+ K+ FL +
Sbjct: 69 AFNKKASPKSWLDLGSGAGFPGIIIAI----LSEMAVTLVESRRKRVEFLEKAAEAAGTP 124
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++ D+I+ARA A LD L +FP+ + +
Sbjct: 125 VTILGQRLENIE--PQAFDIITARAFAPLDKLWRLAFPFSHNE 165
>gi|307565608|ref|ZP_07628088.1| 16S rRNA methyltransferase GidB [Prevotella amnii CRIS 21A-A]
gi|307345767|gb|EFN91124.1| 16S rRNA methyltransferase GidB [Prevotella amnii CRIS 21A-A]
Length = 208
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S + +++ Y L+ W+ KIN++S +++ + HV S+ + +L + + +D
Sbjct: 12 DLSDKQIKQFSLLYDLYQDWNAKINIISRKDIDNLYEHHVLHSMAIAKLIHFKAGTTILD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
G+GGGFPGI +I + +I+ KK + + R + R +E
Sbjct: 72 FGTGGGFPGIPLAILFPEV---SFKMIDGTGKKIKVATEIGKDIELRNILPMHMRGEEEK 128
Query: 137 QMITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 129 D---KFDFIVSRAVMPLPNLIK 147
>gi|228473568|ref|ZP_04058320.1| 16S rRNA methyltransferase GidB [Capnocytophaga gingivalis ATCC
33624]
gi|228274940|gb|EEK13750.1| 16S rRNA methyltransferase GidB [Capnocytophaga gingivalis ATCC
33624]
Length = 203
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP- 70
LL + ++ + + L+ +W+ +IN++S +E F I H+ SL + ++HP
Sbjct: 2 ELLLKYFPELTPTQVAQYTQAVSLYKEWNARINVISRKDMEHFVIHHLLHSLGIAKIHPL 61
Query: 71 -YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+GGGFPGI +I + +L++S KK + V + +
Sbjct: 62 SAGQKVLDVGTGGGFPGIPLAILYPEV---SFHLVDSIGKKIKVVEEVASALSLSNVTYQ 118
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D I +RA+ + + + L
Sbjct: 119 Q--ARVETLAGQYDYIVSRAVTQMADFYKLTKHLLKP 153
>gi|294341940|emb|CAZ90369.1| putative Methyltransferase gidB (Glucose-inhibited division protein
B) [Thiomonas sp. 3As]
Length = 224
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+ + ++L + L +W++ NL + +E H+ D L P
Sbjct: 26 QLDFTARQRQQLLDYTALLQRWNRVFNLTAVRDLEGIARLHLADCLAALPALQRLAPRRL 85
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
+D+GSGGG PGI+ +I L E V+LI++ KK +FL+ R V R++
Sbjct: 86 LDVGSGGGLPGIVFAIGLPEAE---VHLIDTVQKKCAFLQQTCGSLQLRQVNVHHARVEA 142
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D I++RA +DL L++ + L
Sbjct: 143 LADARG-FDCITSRAFSDLPLLIQSTRHLLAD 173
>gi|91785987|ref|YP_546939.1| 16S rRNA methyltransferase GidB [Polaromonas sp. JS666]
gi|123165596|sp|Q12HF1|RSMG_POLSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91695212|gb|ABE42041.1| 16S rRNA m(7)G-527 methyltransferase [Polaromonas sp. JS666]
Length = 226
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 18/170 (10%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+ + + LRA ++ + +L + L KW+K NL + + H+
Sbjct: 1 MRGGEQD--LRAGLKALQLELTDSQVGQLLDYQDLIGKWTKVYNLTAVRDPVEMMTHHLL 58
Query: 61 DSLRVFQLH---------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
DSL + +D+GSG G PG++ +I + V +++ KKA
Sbjct: 59 DSLAAVPPLRRHLRKTGQEQGACLLDVGSGAGLPGVVIAICCPEV---AVTCVDTVAKKA 115
Query: 112 SFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+F++ R++ + DVI +RA A L ++S
Sbjct: 116 AFIKQAALALKLPNLSGLHARVETITTL---FDVICSRAFASLADFTQWS 162
>gi|306834794|ref|ZP_07467858.1| 16S rRNA methyltransferase GidB [Corynebacterium accolens ATCC
49726]
gi|304569322|gb|EFM44823.1| 16S rRNA methyltransferase GidB [Corynebacterium accolens ATCC
49726]
Length = 202
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + + Q+ P + ID+GSG G PGI
Sbjct: 18 QEYHDSLATDGSTRGFIGPREVPRLWERHILNCAVIEQVIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAP--QMITTCDVIS 146
+I + + LIE K+ ++L V +K R +E P + + DV++
Sbjct: 78 AIARPDLH---ITLIEPLLKRYNYLNEVTEKLGLENVTVRRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|331007813|ref|ZP_08330918.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC1989]
gi|330418380|gb|EGG92941.1| Ribosomal RNA small subunit methyltransferase G [gamma
proteobacterium IMCC1989]
Length = 225
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 15/160 (9%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR +S + ++ L + F+KW+K NL + +H+ DSL +
Sbjct: 11 LRDGVAKMNIVISDKKIQLLMAYLSEFVKWNKAYNLSAIRDPLVMVEKHLLDSLVLVPFL 70
Query: 70 ------------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
P ID+G+GGG PGI +I I+ L++S KK FL V
Sbjct: 71 EKEIKKNIDKQQPLIERIIDVGTGGGLPGIPLAIIFPEID---FTLLDSNGKKTRFLFQV 127
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+ A + E+ Q ++ +RA A L ++
Sbjct: 128 KTQLALKNVTIENTRVESYQPEKCFSIVMSRAFASLQDMV 167
>gi|319940688|ref|ZP_08015030.1| ribosomal RNA small subunit methyltransferase G [Sutterella
wadsworthensis 3_1_45B]
gi|319805839|gb|EFW02606.1| ribosomal RNA small subunit methyltransferase G [Sutterella
wadsworthensis 3_1_45B]
Length = 214
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S+L A + + + L+ E + L LKW+K NL + E+ H+ DS +
Sbjct: 7 DRSVLTAGLTQLGLSSNLDVLKGFESYAELLLKWNKVYNLTAIRNPEEVLTHHLLDSATL 66
Query: 66 FQ----LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P +D+G GGG P + ++ L + V +++ KKA+F+ +
Sbjct: 67 VPALQRFVPGVDAVLDVGCGGGLPSVPLALLLPHL---SVTGVDAVGKKAAFVNQAAIEL 123
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R +M+ T I++RA A L + L
Sbjct: 124 GLKN--LTARHARVEKMVGTWKAITSRAFASLADFTHLTMHLLA 165
>gi|118471658|ref|YP_891133.1| methyltransferase GidB [Mycobacterium smegmatis str. MC2 155]
gi|189045863|sp|A0R7J5|RSMG_MYCS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118172945|gb|ABK73841.1| methyltransferase GidB [Mycobacterium smegmatis str. MC2 155]
Length = 235
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 24 ETLEKLEYFYFLF----LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ LE E + + ++W L+ V+ W RH+ +S + +L D+G
Sbjct: 19 DRLEAAELYARILAGAGVEWG----LLGPREVDRVWERHILNSAALGELMEPGERVADIG 74
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ--EAPQ 137
SG G PGI ++ I V LIE +++ FLR V + V R + E
Sbjct: 75 SGAGLPGIPLALARPDIH---VTLIEPLLRRSEFLRETVTELGLDVTVVRGRAEDREVRD 131
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV+++RA+A LD L +S P+L
Sbjct: 132 RVGEMDVVTSRAVASLDKLTRWSVPFLRD 160
>gi|90568008|gb|ABD94074.1| At5g50110 [Arabidopsis thaliana]
Length = 208
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHP-----------YPSIWIDLGSGGGFPGIITSI 91
+NL ++ ++ RH+EDSL + ID+GSG G PG++ +I
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPIKTCYNLHSSDLFDHINLIDVGSGAGLPGLVLAI 60
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ---EAPQMITTCDVISA 147
V L+ES NK+ FL +VV T + R + DV A
Sbjct: 61 ACPDWR---VTLLESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIA 117
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ L EY P +
Sbjct: 118 RAVAEMRVLAEYCLPLVR 135
>gi|256833761|ref|YP_003162488.1| methyltransferase GidB [Jonesia denitrificans DSM 20603]
gi|256687292|gb|ACV10185.1| methyltransferase GidB [Jonesia denitrificans DSM 20603]
Length = 210
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
E++E F +K L+ ++ W RH+ +S V P S DLGSG G P
Sbjct: 18 FERIEKFATNLAHEGEKRGLIGPRELDRLWDRHILNSAAVVPFIPEGSSVADLGSGAGLP 77
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
G++ + V L+E ++ +L +V+ +V R +E T DV
Sbjct: 78 GLVIACMRPEAH---VRLVEPMERRCVWLEEMVETLDLDNVEVLRGRAEEFHGAF-TVDV 133
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
++ARA+A LD L ++ P L +
Sbjct: 134 VTARAVAALDKLSRWALPLLEPQ 156
>gi|110637602|ref|YP_677809.1| 16S rRNA methyltransferase GidB [Cytophaga hutchinsonii ATCC 33406]
gi|123163685|sp|Q11VU7|RSMG_CYTH3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110280283|gb|ABG58469.1| 16S rRNA m(7)G-527 methyltransferase [Cytophaga hutchinsonii ATCC
33406]
Length = 207
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++S E +++ + L+ +W++KIN+VS ++ + RHV SL + ++ + + +D
Sbjct: 10 HLSPEQVKQFGALHSLYTEWNEKINVVSRKDIDQLYERHVLHSLGIAKVMAFKPGTRILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGGFPGI SI + +LI+S KK + V + + R ++
Sbjct: 70 VGTGGGFPGIPLSILFPESD---FHLIDSIGKKIKVVEEVSAGAGIKNIRTTHGRAEDVT 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
+ +RA+ +
Sbjct: 127 D---RYHFVVSRAVTRFKPFWGW 146
>gi|227502236|ref|ZP_03932285.1| glucose-inhibited division protein [Corynebacterium accolens ATCC
49725]
gi|227077060|gb|EEI15023.1| glucose-inhibited division protein [Corynebacterium accolens ATCC
49725]
Length = 202
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + V W RH+ + + Q+ P + ID+GSG G PGI
Sbjct: 18 QEYHDSLATDGSTRGFIGPREVPRLWERHILNCAVIEQVIPEGATVIDVGSGAGLPGIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVIS 146
+I + + LIE K+ ++L V + V R +E P + + DV++
Sbjct: 78 AIARPDLH---ITLIEPLLKRYNYLNEVTENLGLDNVTVLRGRAEEGPIKKAVAGADVVT 134
Query: 147 ARALADLDTLLEYSFPWLYQ 166
+RA+A L L ++S P + +
Sbjct: 135 SRAVAPLGKLAKWSLPLVRK 154
>gi|332665463|ref|YP_004448251.1| ribosomal RNA small subunit methyltransferase G [Haliscomenobacter
hydrossis DSM 1100]
gi|332334277|gb|AEE51378.1| Ribosomal RNA small subunit methyltransferase G [Haliscomenobacter
hydrossis DSM 1100]
Length = 208
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSI 91
L+ +W+ KIN+VS ++ + H+ SL + ++ + + +D+G+GGG PGI +I
Sbjct: 24 ALYREWNAKINVVSRKDIDSLYAHHILHSLGIAKVINFKPGAEILDIGTGGGLPGIPLAI 83
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISARAL 150
+ L++ KK ++ +VQ R +E + D RA+
Sbjct: 84 VFPETQ---FTLVDGTGKKILVVKEIVQALGLSNVDAHHARAEELKR---QFDFTVCRAV 137
Query: 151 ADLDTLLEYSFPWLYQKK 168
LD L +S+P + +K+
Sbjct: 138 TTLDKLCAWSWPLIKRKQ 155
>gi|326772849|ref|ZP_08232133.1| 16S rRNA methyltransferase GidB [Actinomyces viscosus C505]
gi|326637481|gb|EGE38383.1| 16S rRNA methyltransferase GidB [Actinomyces viscosus C505]
Length = 216
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 30 EHFAQMLAEEGELRGLVGPRELPRLWTRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ R A ++ DV++ARA
Sbjct: 90 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDNVTI--RRARAEEVKDRYDVVTARA 144
Query: 150 LADLDTLLEYSFPWLYQ 166
+A+L L+ + P L
Sbjct: 145 VANLSKLVRLTAPLLRP 161
>gi|312136218|ref|YP_004003556.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
gi|311776269|gb|ADQ05756.1| methyltransferase GidB [Caldicellulosiruptor owensensis OL]
Length = 238
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-----IWIDLGSG 81
+ + L LK +K NL + E F I+H+ DSL + + + ID+GSG
Sbjct: 21 QLFLKYMNLVLKKNKLFNLTAIEDEEGFVIKHIADSLSLLKFIEEEDSGKNPVAIDIGSG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ--- 137
G PG++ I SI V L +S KK +F+ + G +V R + +
Sbjct: 81 FGVPGLVLKIAKPSI---TVFLNDSNRKKCNFMMEAKESLGIAGVEVICDRAENLGRKEV 137
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
D ARA+ L+ L EY+ P L
Sbjct: 138 FRERFDFAFARAVDKLNVLCEYAIPLLK 165
>gi|227834358|ref|YP_002836065.1| glucose-inhibited division protein B [Corynebacterium aurimucosum
ATCC 700975]
gi|262183090|ref|ZP_06042511.1| 16S rRNA methyltransferase GidB [Corynebacterium aurimucosum ATCC
700975]
gi|227455374|gb|ACP34127.1| glucose-inhibited division protein B [Corynebacterium aurimucosum
ATCC 700975]
Length = 209
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L+ +V L + ++ + V W RH+ + V ++ P +
Sbjct: 11 LDPSDVFGSRLPLAQKYHDSLATDGSTRGFIGPREVPRLWERHLINCAVVAEVMPEGATL 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+GSG G PGI +I + + LIE K++++L VV V R +E
Sbjct: 71 IDVGSGAGLPGIPLAIARPDLN---ITLIEPLLKRSTYLNEVVDLLGLDNVTVIRGRAEE 127
Query: 135 AP--QMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + + D++++RA+A L L ++S P + +
Sbjct: 128 GPVKKAVKGADIVTSRAVAPLGKLAKWSLPLVRK 161
>gi|150024517|ref|YP_001295343.1| glucose-inhibited division protein B [Flavobacterium psychrophilum
JIP02/86]
gi|189039390|sp|A6GWQ2|RSMG_FLAPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149771058|emb|CAL42525.1| Methyltransferase GidB [Flavobacterium psychrophilum JIP02/86]
Length = 209
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
L + +++ + + E L+ W+ KIN++S +++ + +HV SL + ++ +
Sbjct: 2 EEILKHFPDLTNLQITQFEKLEALYQDWNAKINVISRKDIDELYTKHVLHSLAIAKIQKF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
+ +D+G+GGGFPGI +I LI+ KK ++ V + +
Sbjct: 62 EAGTYVLDVGTGGGFPGIPLAILFPETR---FYLIDVILKKIKVVQAVAEALELKNVKAE 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEY 159
R + D I +RA+ ++ + +
Sbjct: 119 QIRAENVK---GDFDFIVSRAVTNMPDFVCW 146
>gi|254292378|ref|YP_003058401.1| methyltransferase GidB [Hirschia baltica ATCC 49814]
gi|254040909|gb|ACT57704.1| methyltransferase GidB [Hirschia baltica ATCC 49814]
Length = 216
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 57/159 (35%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
R+ L + +VSRET +K+ + KW K NL+ W RH+ DSL+V+Q
Sbjct: 11 FRSKDLSDYLDVSRETFDKINIVVEVLDKWRKTHNLIGPLERNRLWRRHILDSLQVYQYR 70
Query: 70 -PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
S WIDLGSG GFP +I + + E L+ES KK +FLR + V
Sbjct: 71 SDNASKWIDLGSGAGFPALIMACASGNAE-EKYTLVESNGKKCAFLRAAARAANLNISVE 129
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
RI+ T D +++RALA L L +YS +L K
Sbjct: 130 NSRIESVS--RETYDHVTSRALASLPQLYDYSERFLANK 166
>gi|886320|gb|AAB53136.1| glucose-inhibited division protein B [Mycobacterium leprae]
Length = 252
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ W RH+ +S V +L +D+GSG G PG+
Sbjct: 41 QRYVDLLANTGIERGLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ +FLR VV + +V R +E I DV +
Sbjct: 101 AIARPDLQ---VVLLEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVS 157
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 158 RAVAALDKLTKWSIPLLRP 176
>gi|269118890|ref|YP_003307067.1| methyltransferase GidB [Sebaldella termitidis ATCC 33386]
gi|268612768|gb|ACZ07136.1| methyltransferase GidB [Sebaldella termitidis ATCC 33386]
Length = 231
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIW 75
+ + +E L + L + +K +NL + ++ +H DSL + +L +
Sbjct: 12 SNIKLDNSKVEILLKYLRLLTEKNKVMNLTAIRDEKEILEKHFIDSLLLSELFLHTDKKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
ID+G+G GFPG++ ++ + L++S KK SF+ + R ++
Sbjct: 72 IDIGTGAGFPGLVLAVAFPEKD---FLLVDSVRKKISFIDEAAENLGLTNVKTSYERAED 128
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++ D+ R +A+L +LEY P L
Sbjct: 129 LVTKSRSSFDLGLCRGVANLRIILEYMIPLLK 160
>gi|325066327|ref|ZP_08125000.1| methyltransferase GidB [Actinomyces oris K20]
Length = 214
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWTRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ R A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDNVTI--RRARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWLYQ 166
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLLRP 159
>gi|297792303|ref|XP_002864036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309871|gb|EFH40295.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 208
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 18/138 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHP-----------YPSIWIDLGSGGGFPGIITSI 91
+NL ++ ++ RH+EDSL + +D+GSG G PG++ +I
Sbjct: 1 MNLTATKEADEVMERHIEDSLAILPPLKACYNLHSNDLFDHINLVDVGSGAGLPGLVLAI 60
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQMITTCDVISA 147
V L+ES NK+ FL +VV T + R + DV A
Sbjct: 61 ACPDWR---VTLLESINKRCIFLEHVVNVTGLTNVKIVRGRAESCGHDVMYREKFDVAIA 117
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ L+EY P +
Sbjct: 118 RAVAEMRVLVEYCLPLVR 135
>gi|296137581|ref|YP_003644823.1| methyltransferase GidB [Thiomonas intermedia K12]
gi|295797703|gb|ADG32493.1| methyltransferase GidB [Thiomonas intermedia K12]
Length = 224
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIW 75
+ + ++L + L +W++ NL + +E H+ D L P
Sbjct: 26 QLDFTERQRQQLLDYTALLQRWNRVFNLTAVRDLEGIARLHLADCLAALPALQRLAPQRL 85
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
+D+GSGGG PGI+ +I L E V+LI++ KK +FL+ R V R++
Sbjct: 86 LDVGSGGGLPGIVFAIGLPEAE---VHLIDAVQKKCAFLQQTSGSLQLRQVSVHHARVEA 142
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D +++RA +DL L++ + L
Sbjct: 143 LADARG-FDCMTSRAFSDLPLLIQSTRHLLAD 173
>gi|237756366|ref|ZP_04584914.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691480|gb|EEP60540.1| 16S rRNA methyltransferase GidB [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 200
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ N ++ LE + + + LKW+K NL S ++ I+H DSL + +
Sbjct: 3 ELLKDLAEKNGIILTGNQLELFDKYLSMLLKWNKVYNLTSVRKKDEIVIKHFLDSLTLVK 62
Query: 68 LHP------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L D G+GGGFPG+ I + LIES NKK FL + ++
Sbjct: 63 LFEAKGISVEDKEIADFGTGGGFPGVPLKIYYQD--KIKLYLIESINKKCIFLEMLKKEL 120
Query: 122 AARGKVFACRIQEAPQMITTCDVISARA 149
V R + + D++ +RA
Sbjct: 121 KIDYTVLCDRAE---NIDKKFDIVVSRA 145
>gi|320532821|ref|ZP_08033598.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134972|gb|EFW27143.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 171
str. F0337]
Length = 214
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPGI+
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWSRHIVNSAAVVPFLPARGSVADVGSGAGFPGIVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ R A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDNVTV--RRARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWLYQ 166
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLLRP 159
>gi|254515877|ref|ZP_05127937.1| methyltransferase GidB [gamma proteobacterium NOR5-3]
gi|219675599|gb|EED31965.1| methyltransferase GidB [gamma proteobacterium NOR5-3]
Length = 212
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W+K NL + RH+ DSL V+ H ID+G+G G PGI +I L ++
Sbjct: 34 RWNKTYNLTAVRDERAMVTRHLLDSLAVYP-HLQGQRLIDVGTGAGLPGIPLAIALPNLH 92
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISARALADLDTL 156
L++S KK FL + V + V R+ + DV+ +RA A L +
Sbjct: 93 ---FTLLDSNGKKTRFLVHAVSELGLSNVDVVKSRVSDYV-PAQGFDVVLSRAFASLGDM 148
Query: 157 LEYSFPWLYQ 166
+ L
Sbjct: 149 ISSCQHLLSP 158
>gi|239942677|ref|ZP_04694614.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
15998]
gi|239989136|ref|ZP_04709800.1| glucose-inhibited division protein B [Streptomyces roseosporus NRRL
11379]
Length = 238
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 87 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGTLQPVQVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLKP 160
>gi|311897301|dbj|BAJ29709.1| putative ribosomal RNA small subunit methyltransferase G
[Kitasatospora setae KM-6054]
Length = 260
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L + + L + L+ V W RHV + + +L P D+GSG G
Sbjct: 28 DRLPQAVRYTELLATAGVQRGLIGPREVPRLWDRHVLNCAVLAELLPADVSLCDVGSGAG 87
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PGI ++ + V L+E ++ +FL VV++ V R +E +
Sbjct: 88 LPGIPVALARPDV---SVTLLEPLLRRTTFLEEVVRELGLENVTVLRGRAEETVGKLA-V 143
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
DV++ARA+A LD L + P L
Sbjct: 144 DVVTARAVAPLDRLAGWGMPLLRP 167
>gi|326442155|ref|ZP_08216889.1| 16S rRNA methyltransferase GidB [Streptomyces clavuligerus ATCC
27064]
Length = 240
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 28 RYAELLADAGVRRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 87
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 88 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGKLPPVHVVTARA 144
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 145 VAPLDRLAGWGVPLLRP 161
>gi|114332388|ref|YP_748610.1| methyltransferase GidB [Nitrosomonas eutropha C91]
gi|122312972|sp|Q0ADD7|RSMG_NITEC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114309402|gb|ABI60645.1| 16S rRNA m(7)G-527 methyltransferase [Nitrosomonas eutropha C91]
Length = 214
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+L + L KW+ NL S E RH+ DSL V P+ +D+GSG G PGI
Sbjct: 27 RLLRYIELITKWNSTHNLTSVRNPESMITRHMLDSLVVLPHISGPN-IVDVGSGAGLPGI 85
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ + V ++ES KKA F++ VV + + E + D + +
Sbjct: 86 PIALARPEWQ---VVMVESNQKKAVFMQQVVVELRLQNVSIRQERVEKIKPGNKVDTVIS 142
Query: 148 RALADLDTLLEYS 160
RA + L+ + S
Sbjct: 143 RAFSSLERFMRLS 155
>gi|332300024|ref|YP_004441945.1| Ribosomal RNA small subunit methyltransferase G [Porphyromonas
asaccharolytica DSM 20707]
gi|332177087|gb|AEE12777.1| Ribosomal RNA small subunit methyltransferase G [Porphyromonas
asaccharolytica DSM 20707]
Length = 224
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 12 ANYLLNTYN-VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
+ LL + +S ++L Y L+ +W+ +IN++S +++ ++ HV SL + L P
Sbjct: 13 LDRLLRQFPALSPTAQQQLTALYPLYKEWNARINVISRRDIDNLYLHHVMHSLALAWLLP 72
Query: 71 YPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK- 126
D+G GGGFP I +I + LI+S KK + + +
Sbjct: 73 DEPTSYTIADVGCGGGFPSIPLAILYPQYQ---FLLIDSIAKKLHVAQAIADEIGLTNVS 129
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R++ CD I +RA L L EY+ L+
Sbjct: 130 THHTRVESCE---LRCDYIVSRAAMPLGLLYEYTQHMLH 165
>gi|288939800|ref|YP_003442040.1| methyltransferase GidB [Allochromatium vinosum DSM 180]
gi|288895172|gb|ADC61008.1| methyltransferase GidB [Allochromatium vinosum DSM 180]
Length = 231
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 6/148 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + E +L L +W++ NL + + +H+ DSL +
Sbjct: 32 LSHGCAALGLAPTPEQQARLVALLGLLTRWNQAYNLTAVRDPLEMVAKHLLDSLAIAPFL 91
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ +D+G+G G PG+ +I + L++S NKK F+R V + +
Sbjct: 92 -FGETVLDVGTGAGLPGLPLAILVPERR---FWLLDSNNKKVRFVRQAVLELGLTNVEPV 147
Query: 129 ACRIQEAPQMITTCDVISARALADLDTL 156
RI+ I +RA+A L
Sbjct: 148 QSRIETYRPGR-KFSTIVSRAVAAESVL 174
>gi|320353034|ref|YP_004194373.1| methyltransferase GidB [Desulfobulbus propionicus DSM 2032]
gi|320121536|gb|ADW17082.1| methyltransferase GidB [Desulfobulbus propionicus DSM 2032]
Length = 217
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVED-FWIRHVEDS 62
D+ +LR + E +E+L + +KWS+++NL++ T E+ H DS
Sbjct: 3 SDNRQLLRTGSQRLGIPLGDEAIERLLIYLAQLMKWSRRVNLIARDTPEEQAVELHFLDS 62
Query: 63 LRVFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + L P +D+G+G GFPG++ + L L+E + K+ SFLR++++
Sbjct: 63 LTLAPLLQEPEAVHLLDVGTGAGFPGLVLACVLPEAR---FTLVEPRQKRVSFLRHLIRT 119
Query: 121 TAARG-KVFACRIQ-EAPQMITTCDVISARALADLDTLLEYSFPW 163
+V A R++ A +++RA+A+ L P
Sbjct: 120 LGLSNTEVVADRLEPHAQAWQGRFTHVTSRAVAEPGLFLPLVRPL 164
>gi|225020857|ref|ZP_03710049.1| hypothetical protein CORMATOL_00865 [Corynebacterium matruchotii
ATCC 33806]
gi|224946339|gb|EEG27548.1| hypothetical protein CORMATOL_00865 [Corynebacterium matruchotii
ATCC 33806]
Length = 205
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 6/146 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L + E ++ L + W RH+ + + + D+GSG G
Sbjct: 10 DNLARAERYHDLLATTGAIRGFIGPRETPKLWDRHILNCAVLGEAIAAGLTVADIGSGAG 69
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMIT 140
PGI +I + + L+E K+++FL VV + V R +E +
Sbjct: 70 LPGIPLAIARPDL---TIYLVEPLLKRSTFLTEVVHELGLENVTVIRGRAEEREVKAALG 126
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L L +S P +
Sbjct: 127 LVDVVTSRAVAPLGKLAGWSLPLVKP 152
>gi|329944748|ref|ZP_08292827.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 170
str. F0386]
gi|328529884|gb|EGF56774.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 170
str. F0386]
Length = 214
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E+F + + + LV + W RH+ +S V P D+GSG GFPG++
Sbjct: 28 EHFAQMLAEEGELRGLVGPRELPRLWSRHIVNSAAVVPFLPARGSVADVGSGAGFPGVVV 87
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ ++ V LIE+ ++ +L VV++ R A ++ DV++ARA
Sbjct: 88 ALLRPDLD---VTLIETMERRTQWLSDVVEELDLDNVTI--RRARAEEIKDRYDVVTARA 142
Query: 150 LADLDTLLEYSFPWLYQ 166
+A+L L+ + P L
Sbjct: 143 VANLSKLVRLTAPLLRP 159
>gi|56751255|ref|YP_171956.1| 16S rRNA methyltransferase GidB [Synechococcus elongatus PCC 6301]
gi|81299078|ref|YP_399286.1| 16S rRNA methyltransferase GidB [Synechococcus elongatus PCC 7942]
gi|81596038|sp|Q5N2N4|RSMG_SYNP6 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123557523|sp|Q31RM0|RSMG_SYNE7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|56686214|dbj|BAD79436.1| glucose inhibited division protein B [Synechococcus elongatus PCC
6301]
gi|81167959|gb|ABB56299.1| methyltransferase GidB [Synechococcus elongatus PCC 7942]
Length = 242
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS---LRVFQLHPYPSIWIDLGSGGGFP 85
E Y + ++++NL + +F +H+ DS LR + ID+G+GGGFP
Sbjct: 28 FEALYHGIIAGNQRLNLTRITDPAEFTEKHLWDSLYGLRPLLTDDWSGEIIDIGTGGGFP 87
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQE---APQMITT 141
G+ +I + V L++S KK FL+ + Q+ A R +E +
Sbjct: 88 GLPAAIA---LTKSRVMLLDSTRKKIQFLQTLAQELGLSNVTVAVGRAEEWGRDRRQRAR 144
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
D + RA+ EY P L
Sbjct: 145 YDWATIRAVGPATVCAEYCLPLLK 168
>gi|15606707|ref|NP_214087.1| glucose inhibited division protein B [Aquifex aeolicus VF5]
gi|3913740|sp|O67522|RSMG_AQUAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2983927|gb|AAC07476.1| glucose inhibited division protein B [Aquifex aeolicus VF5]
Length = 196
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++R + + + E K + L+W+K NL S E+ RH DS+ V +
Sbjct: 1 MIRELFEKEGFTLDEEQERKFSIYLQELLRWNKVHNLTSIKKPEEIVRRHFIDSVSVVRC 60
Query: 69 HP------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ D+GSG GFPG+ I L I+ + LIES +KK SFL Y+ K
Sbjct: 61 FERIGLDLRGKHFADVGSGAGFPGVPLKIYLKDIK---LTLIESVSKKCSFLEYLKIKLN 117
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALAD 152
+V R ++ DV+ ARAL +
Sbjct: 118 EDYRVLCTRAEKVE---EKFDVVLARALGE 144
>gi|289770499|ref|ZP_06529877.1| GidB [Streptomyces lividans TK24]
gi|289700698|gb|EFD68127.1| GidB [Streptomyces lividans TK24]
Length = 247
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 8/171 (4%)
Query: 1 MKYCDSNSILRANYLL----NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI 56
M Y + + A L +V + + L + K L+ V W
Sbjct: 1 MPYGRTVPVSEAAELPPVPEQARDVFGDRYADAVRYAELLAEAGVKRGLIGPREVPRLWE 60
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL
Sbjct: 61 RHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVREDLK---ITLLEPLLRRTNFLTE 117
Query: 117 VVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
VV+ V R +E + V++ARA+A LD L + P L
Sbjct: 118 VVELLGLDHVTVVRGRAEEVMGKLPPVHVVTARAVAPLDRLATWGIPLLRP 168
>gi|84514916|ref|ZP_01002279.1| putative GidB, Glucose inhibited division protein [Loktanella
vestfoldensis SKA53]
gi|84511075|gb|EAQ07529.1| putative GidB, Glucose inhibited division protein [Loktanella
vestfoldensis SKA53]
Length = 214
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 87/151 (57%), Gaps = 8/151 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWI 76
+VSRETL L+ F L LKW+ KINL+S+S+ W RHV DS++V++ P +W+
Sbjct: 16 GIDVSRETLADLQAFAALVLKWTPKINLISASSHAMIWDRHVVDSVQVYRHAPDDFHLWL 75
Query: 77 DLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+GSGGGFPGI+ +I + LIES +K +FLR +++ +V A RI+E
Sbjct: 76 DIGSGGGFPGIVAAILGKARHPDAQFVLIESDQRKVAFLRTAIRELGLTARVLADRIEEV 135
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P DV+S RAL + + P + Q
Sbjct: 136 P--PAGADVVSVRALGS----VSFLLPLIMQ 160
>gi|305681660|ref|ZP_07404466.1| 16S rRNA methyltransferase GidB [Corynebacterium matruchotii ATCC
14266]
gi|305658820|gb|EFM48321.1| 16S rRNA methyltransferase GidB [Corynebacterium matruchotii ATCC
14266]
Length = 205
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L + E ++ L + W RH+ + + + D+GSG G
Sbjct: 10 DNLARAERYHDLLATTGAIRGFIGPRETPKLWDRHILNCAVLGEAIATGLTVADIGSGAG 69
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI--T 140
PGI +I + + L+E K+++FL VV++ V R +E +
Sbjct: 70 LPGIPLAIARPDL---TIYLVEPLLKRSTFLTEVVRELGLENVTVIRGRAEEREVKVTLG 126
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L L +S P +
Sbjct: 127 LVDVVTSRAVAPLGKLAGWSLPLVKP 152
>gi|227494183|ref|ZP_03924499.1| glucose-inhibited division protein B [Actinomyces coleocanis DSM
15436]
gi|226831917|gb|EEH64300.1| glucose-inhibited division protein B [Actinomyces coleocanis DSM
15436]
Length = 223
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
+ +++S + +F + + + L+ + W RH+ +S + + P +
Sbjct: 24 IELFDLS---YSAMSHFAQMLVDEGELRGLIGPRELPRLWSRHLVNSAAIVEFIPQRAQM 80
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFPG++ +I ++ V+L+E ++ +L VV + + E
Sbjct: 81 LDVGSGAGFPGMVAAIMRPDVD---VHLVEPMLRRVEWLEDVVAELGLDNVTVHHKRAEE 137
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A+L L+ P +
Sbjct: 138 LHGQGKADVVTSRAVANLKKLMPICMPLVR 167
>gi|332286172|ref|YP_004418083.1| glucose inhibited division protein B [Pusillimonas sp. T7-7]
gi|330430125|gb|AEC21459.1| glucose inhibited division protein B [Pusillimonas sp. T7-7]
Length = 223
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--------PSIWIDLGS 80
L + +W+K NL + E ++H+ DSL + + + +D+GS
Sbjct: 29 LLAYLDQLQRWNKTYNLTALRDPEQMLVQHLIDSLSIVKPISKILDKNTVTENTVVDVGS 88
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
G G PG++ +I + V+ I++ KK +F+R V R + R++ P
Sbjct: 89 GAGLPGVVLAIMQPDWQ---VHCIDAVEKKMAFVRQVSGVLRLRNLQAHHKRVESMPPY- 144
Query: 140 TTCDVISARALADLDTLLEYS 160
D++ +RA A L +
Sbjct: 145 -QADIVVSRAFASLTDFASLA 164
>gi|282863325|ref|ZP_06272384.1| methyltransferase GidB [Streptomyces sp. ACTE]
gi|282561660|gb|EFB67203.1| methyltransferase GidB [Streptomyces sp. ACTE]
Length = 238
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + + P D+GSG G PGI +
Sbjct: 27 RYAELLADAGVKRGLIGPREVPRLWGRHLLNCAVLSEAVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 87 LVRPDLK---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGSLPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLRP 160
>gi|296118599|ref|ZP_06837177.1| 16S rRNA methyltransferase GidB [Corynebacterium ammoniagenes DSM
20306]
gi|295968498|gb|EFG81745.1| 16S rRNA methyltransferase GidB [Corynebacterium ammoniagenes DSM
20306]
Length = 207
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
V ++ L E ++ L + V W RH+ + + ++ + +D+G
Sbjct: 13 EVFKDRLPLAEKYHDLLATDGSTRGFIGPREVPRLWDRHLINCAVITEVMDQGATVVDVG 72
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP-- 136
SG G PGI +I ++ + LIE K++ FL+ VV V R +E P
Sbjct: 73 SGAGLPGIPVAIARPDLK---ITLIEPLLKRSVFLQEVVDALELDNVTVIRGRAEEGPVK 129
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D++++RA+A L L ++S P + +
Sbjct: 130 KAVAGADIVTSRAVAPLGKLAKWSLPLVRR 159
>gi|6539746|gb|AAF16006.1|AF187159_6 GidB [Streptomyces coelicolor A3(2)]
Length = 257
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 45 RYAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 104
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 105 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLPPVHVVTARA 161
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 162 VAPLDRLATWGIPLLRP 178
>gi|315506963|ref|YP_004085850.1| methyltransferase gidb [Micromonospora sp. L5]
gi|315413582|gb|ADU11699.1| methyltransferase GidB [Micromonospora sp. L5]
Length = 362
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ W RH+ + V + P + ID+GSG G PG++ +I + V L+
Sbjct: 161 LIGPRETPRLWERHLLNCAVVAERIPEGASVIDVGSGAGLPGLVLAIARPDL---TVTLV 217
Query: 105 ESKNKKASFLRYVVQKTAA--RGKVFACRIQEAP-----QMITTCDVISARALADLDTLL 157
E ++ +FL VQ+ +VF R +EA + + D+++ARA+A LD L
Sbjct: 218 EPLARRTAFLIEAVQRLGLTRDVRVFRGRAEEAAAGSRDREPLSADIVTARAVAPLDRLA 277
Query: 158 EYSFPWLYQ 166
+ P +
Sbjct: 278 SWCLPLVAP 286
>gi|146299509|ref|YP_001194100.1| glucose-inhibited division protein B [Flavobacterium johnsoniae
UW101]
gi|189039389|sp|A5FJ42|RSMG_FLAJ1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146153927|gb|ABQ04781.1| methyltransferase GidB [Flavobacterium johnsoniae UW101]
Length = 209
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ +L + N++ +E+ + FL+ W++KIN++S ++ + +H+ SL + ++ +
Sbjct: 2 DEILKYFPNLTDLQIEQFQKLDFLYHNWNEKINVISRKDIDSLYTKHILHSLGIAKVMKF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D+G+GGGFPGI +I LI+ KK ++ VV +
Sbjct: 62 EPGTTVLDVGTGGGFPGIPLAILFPETR---FYLIDVIAKKIKVVQGVVDALELKN--VK 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEY 159
+ A + D I +RA+ ++ + +
Sbjct: 117 AEQKRAELVKGDFDFIVSRAVTNMPDFVSW 146
>gi|257785162|ref|YP_003180379.1| methyltransferase GidB [Atopobium parvulum DSM 20469]
gi|257473669|gb|ACV51788.1| methyltransferase GidB [Atopobium parvulum DSM 20469]
Length = 252
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Query: 12 ANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
N LL+ Y + + ++L L ++ ++++NL ++++D I H+ DSL ++
Sbjct: 16 LNELLHNYGIDSTELQRKQLLGHIELLIEINERLNLTRITSIDDALILHILDSLLPLKVC 75
Query: 70 PY----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ID+G+GGGFPG+ +I L++S KK + ++ ++ +
Sbjct: 76 DEFISCNRNYIDIGTGGGFPGLPLAIM----SNNKTLLVDSIGKKVNAVQSMINEIGLEE 131
Query: 126 KVFAC--RIQEAPQ-MITTCDVISARALADLDTLLEYSFPWLY 165
KV A R +E P D ++ RA+A + LLEY+ P+L
Sbjct: 132 KVKAEKLRAEEIPNTYKQKFDFVTFRAVAKTNILLEYAEPFLA 174
>gi|121281964|gb|ABM53568.1| conserved hypothetical protein [uncultured bacterium CBNPD1 BAC
clone 905]
Length = 209
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
Y N ++ +E KL+ L+ W++KIN++S ++ + +HV SL + +++ +
Sbjct: 5 LKYFPNLTDLQKEQFAKLDI---LYHDWNEKINVISRKDIDALYTKHVLHSLGIAKINKF 61
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
+ +D+G+GGGFPGI +I LI+ KK ++ V + +
Sbjct: 62 EPGTFVLDVGTGGGFPGIPLAILFPETR---FYLIDVIAKKIKVVKAVAEALELKNVKAE 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R + D I +RA+ ++ + + + +++
Sbjct: 119 QIRAENVK---GDFDFIVSRAVTNMPDFVSWVKTKIKKQQ 155
>gi|189485616|ref|YP_001956557.1| glucose-inhibited cell division protein GidB [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|170287575|dbj|BAG14096.1| glucose-inhibited cell division protein GidB [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 276
Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 74/176 (42%), Gaps = 35/176 (19%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS----------LRVFQLHPY 71
S+ET +K E +++ KW+KK NL+S + D RH DS L V++L Y
Sbjct: 27 SKETRKKFETYFYELNKWNKKFNLISFKNIRDLVYRHFCDSLYSAKAISDILTVYRLSIY 86
Query: 72 PSI-------------------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
DLG+G G PGI I L I+ + LIES KK
Sbjct: 87 SKRKRKREGAGRKQKSAESAFKVADLGTGSGMPGIPVKIALPCIK---LTLIESITKKCR 143
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
FL + K ++ R +E Q D I +RA++ L LE S P L
Sbjct: 144 FLNNINNKLGFNTEILNKRAEEIGQNTSYRQQYDFILSRAVSKLSPNLEISIPLLK 199
>gi|13432164|sp|Q50203|RSMG_MYCLE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
Length = 245
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ W RH+ +S V +L +D+GSG G PG+
Sbjct: 41 QRYVDLLANTGIERGLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ +FLR VV + +V R +E I DV +
Sbjct: 101 AIARPDLQ---VVLLEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVS 157
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 158 RAVAALDKLTKWSIPLLRP 176
>gi|325269872|ref|ZP_08136482.1| glucose inhibited division protein B [Prevotella multiformis DSM
16608]
gi|324987845|gb|EGC19818.1| glucose inhibited division protein B [Prevotella multiformis DSM
16608]
Length = 207
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E++ L+ W+ KIN++S +++ + H+ SL + + + + +D
Sbjct: 11 HLTPRQEEQIAALDTLYHDWNAKINVISRKDIDNLYEHHILHSLAIAKRIRFREGTNVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
G+GGGFPGI +I LI+ KK R + + R +E
Sbjct: 71 FGTGGGFPGIPLAILFPESN---FKLIDGTGKKIKVAREIADSIGLENVLPMHQRGEE-- 125
Query: 137 QMITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 126 -EKGKFDFIVSRAVMPLPELMK 146
>gi|15828466|ref|NP_302729.1| 16S rRNA methyltransferase GidB [Mycobacterium leprae TN]
gi|221230943|ref|YP_002504359.1| 16S rRNA methyltransferase GidB [Mycobacterium leprae Br4923]
gi|254766899|sp|B8ZTN3|RSMG_MYCLB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13093896|emb|CAC32240.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219934050|emb|CAR72808.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 248
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ W RH+ +S V +L +D+GSG G PG+
Sbjct: 44 QRYVDLLANTGIERGLLGPHEANRLWDRHLLNSAVVAELLDPGDRVVDIGSGAGLPGLPL 103
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ +FLR VV + +V R +E I DV +
Sbjct: 104 AIARPDLQ---VVLLEPLLRRVTFLREVVAELGLDVEVVRGRAEELWVRDRIGERDVAVS 160
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 161 RAVAALDKLTKWSIPLLRP 179
>gi|119358162|ref|YP_912806.1| 16S rRNA methyltransferase GidB [Chlorobium phaeobacteroides DSM
266]
gi|166224580|sp|A1BJ05|RSMG_CHLPD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119355511|gb|ABL66382.1| 16S rRNA m(7)G-527 methyltransferase [Chlorobium phaeobacteroides
DSM 266]
Length = 222
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ L+ + +S EKL + L W+ KINL+S I+HV SL +
Sbjct: 12 AELKTLCNKDNIVLSLSQYEKLVGYALLLEDWNNKINLISRKEDAPILIKHVFHSLLIGL 71
Query: 68 LHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
H + S +DLG+GGG PGI +I + L+++ KK + + +++ +
Sbjct: 72 FHQFSSSEKVLDLGTGGGLPGIPLAIAWPDTQ---FLLVDATGKKIAACQSMIKSLDIKN 128
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R++E M + D + +R +A L+ L Y+ L
Sbjct: 129 AVAVHSRVEELKGM--SFDTVLSRQVAQLEQLCSYASKILKP 168
>gi|302870726|ref|YP_003839363.1| methyltransferase [Micromonospora aurantiaca ATCC 27029]
gi|302573585|gb|ADL49787.1| methyltransferase GidB [Micromonospora aurantiaca ATCC 27029]
Length = 362
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ W RH+ + V + P + ID+GSG G PG++ +I + V L+
Sbjct: 161 LIGPRETPRLWERHLLNCAVVAERIPEGASVIDVGSGAGLPGLVLAIARPDL---TVTLV 217
Query: 105 ESKNKKASFLRYVVQKTAA--RGKVFACRIQEAP-----QMITTCDVISARALADLDTLL 157
E ++ +FL VQ+ +VF R +EA + + D+++ARA+A LD L
Sbjct: 218 EPLARRTAFLIEAVQRLGLTRDVRVFRGRAEEAAAGSRDREPLSADIVTARAVAPLDRLA 277
Query: 158 EYSFPWLYQ 166
+ P +
Sbjct: 278 SWCLPLVAP 286
>gi|257468581|ref|ZP_05632675.1| glucose inhibited division protein B [Fusobacterium ulcerans ATCC
49185]
gi|317062838|ref|ZP_07927323.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
ulcerans ATCC 49185]
gi|313688514|gb|EFS25349.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
ulcerans ATCC 49185]
Length = 233
Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 7/164 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + ++ L + L +++ NL + + +H DSL +
Sbjct: 1 MREFLLEGIKKLNIEYTDKKVDNLIKYLELLTEYNSHTNLTALRDEKSIIEKHFLDSLLL 60
Query: 66 FQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
L ID+G+G GFPG++ +I IE L++S KK FL V +
Sbjct: 61 QNLIKRESKKAIDIGTGAGFPGMVLAIFNPDIE---FTLMDSIGKKTKFLELVKENLRLD 117
Query: 125 GK-VFACRIQEA--PQMITTCDVISARALADLDTLLEYSFPWLY 165
V R ++ T D+ R ++ L T+LEY P+L
Sbjct: 118 NVNVVTSRAEDYITDGNRQTYDLGLCRGVSKLSTILEYIIPFLK 161
>gi|255994563|ref|ZP_05427698.1| 16S rRNA methyltransferase GidB [Eubacterium saphenum ATCC 49989]
gi|255993276|gb|EEU03365.1| 16S rRNA methyltransferase GidB [Eubacterium saphenum ATCC 49989]
Length = 239
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+I+ + E L + LK ++KINL + E+ ++H+ DSL V +
Sbjct: 7 TIILEGAEAEGIALYEGKAEILANYLLELLKINEKINLTAVRDPEEAAVKHIVDSLVVEK 66
Query: 68 -LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+DLG+GGGFPG+ ++ G V L++SK KK + + VV
Sbjct: 67 AFGIEDRRILDLGTGGGFPGVPLAVA---CGGREVVLLDSKKKKLNVIEAVVDNLGIDNV 123
Query: 127 VF-ACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
F R +EA ++ + DV ARA+A+L LLE + P + K
Sbjct: 124 SFLPQRAEEASKEERLRESFDVCVARAVAELRVLLEIAVPLVKLK 168
>gi|282879011|ref|ZP_06287773.1| 16S rRNA methyltransferase GidB [Prevotella buccalis ATCC 35310]
gi|281298846|gb|EFA91253.1| 16S rRNA methyltransferase GidB [Prevotella buccalis ATCC 35310]
Length = 208
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 9/144 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E ++ L+ W+ KIN++S ++ + HV SL + +L + + +D
Sbjct: 12 SLTEEQKKQYGMLQELYSDWNAKINVISRKDIDHLYEHHVLHSLSIAKLIGFIDETKVLD 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAP 136
LG+GGGFPGI +I LI+ KK + + R +E
Sbjct: 72 LGTGGGFPGIPLAIMFPKC---SFTLIDGTGKKVRVAEEIAHSIGLKNVTTKHIRGEEEK 128
Query: 137 QMITTCDVISARALADLDTLLEYS 160
+ D + +RA L L++ +
Sbjct: 129 GL---YDFVVSRAAMSLPDLVKIA 149
>gi|293602668|ref|ZP_06685109.1| glucose-inhibited cell division protein B [Achromobacter piechaudii
ATCC 43553]
gi|292818859|gb|EFF77899.1| glucose-inhibited cell division protein B [Achromobacter piechaudii
ATCC 43553]
Length = 237
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 13/165 (7%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D L V KL + +W++ NL + + I+H+ DSL
Sbjct: 10 ADMAGRLSRACEQLGLAVDDAAKAKLLNYLAQMQRWNRTYNLTAIRDPQQMLIQHLFDSL 69
Query: 64 RVFQLHPYP-------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ D+GSGGG PG++ +I + V I++ KK +F+R
Sbjct: 70 SAVAPFCEALGASGTSAKVYDVGSGGGLPGVVLAIMQPAW---SVTCIDAVEKKTAFVRQ 126
Query: 117 VVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + + RI+ CD++++RA A LD + +
Sbjct: 127 MSGALSLPNLQARHARIETLE--PAECDIVTSRAFASLDDFAQLA 169
>gi|326336195|ref|ZP_08202367.1| glucose inhibited division protein B [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325691704|gb|EGD33671.1| glucose inhibited division protein B [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 203
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 13 NYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
LL + ++ + + + L+ W+ +IN++S +E F + H+ SL + ++ +
Sbjct: 2 ELLLKYFPELTPKQIAQYTEAISLYKDWNTRINVISRKDMEHFVLHHLLHSLGIAKICSF 61
Query: 72 PS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
S +D+G+GGGFPGI +I + +L++S KK ++ V + +
Sbjct: 62 ESGIKVLDVGTGGGFPGIPLAILYPEV---SFHLVDSIGKKIKVVQEVANALSLTNVTYQ 118
Query: 130 C-RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ D I +RA+ +D + + L
Sbjct: 119 QVRVETLE---GQYDYIVSRAVTQMDDFYKLTKHLLKP 153
>gi|21674969|ref|NP_663034.1| glucose-inhibited division protein B [Chlorobium tepidum TLS]
gi|28201805|sp|Q8KAK0|RSMG_CHLTE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21648201|gb|AAM73376.1| glucose inhibited division protein B [Chlorobium tepidum TLS]
Length = 217
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L + V++ L L + L W+ K+NLVS ++HV SL + ++
Sbjct: 7 LLEGLCRQHGIPVTKNALTLLVRYARLLEAWNLKVNLVSRKEHAPVIVKHVFHSLLIARI 66
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
H + +DLG+GGG PGI +I L++S KK + + ++++
Sbjct: 67 HDFKPGETVLDLGTGGGLPGIPLAILFPET---SFLLVDSTGKKIAACKAMIKELGLENV 123
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R++E +I D + +R +A L+ L YS L
Sbjct: 124 IALHSRVEELKGVI--FDTVLSRQVAPLEELCAYSARLLK 161
>gi|291532560|emb|CBL05673.1| 16S rRNA methyltransferase GidB [Megamonas hypermegale ART12/1]
Length = 143
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSIW 75
++ + + +Y L ++W++KINL + + + I+H+ DSL + +L
Sbjct: 15 GLELTSDQISAFNKYYELLVEWNEKINLTAITEPREVAIKHIVDSLSCYQKELFTGQVSL 74
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQE 134
ID+G+G GFPG+ I ++ + L++S NK+ FL+ VV + + +V R +E
Sbjct: 75 IDVGTGAGFPGLPLKIFCPELK---LTLLDSLNKRVKFLQLVVDELGLKDVEVIHARSEE 131
Query: 135 APQMI 139
A +
Sbjct: 132 AARNK 136
>gi|260911194|ref|ZP_05917797.1| glucose-inhibited division protein B [Prevotella sp. oral taxon 472
str. F0295]
gi|260634674|gb|EEX52761.1| glucose-inhibited division protein B [Prevotella sp. oral taxon 472
str. F0295]
Length = 215
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
N++ E ++L L+ W++KIN+VS +++ ++ HV SL + + + + +D
Sbjct: 19 NLTAEQQDQLIKLGELYRMWNEKINVVSRKDIDNLYLHHVLHSLAIAKYVQFKAGTRVLD 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPGI +I + LI+ KK + + +
Sbjct: 79 FGTGGGFPGIPLAIVFPECQ---FKLIDRTAKKIRVTQEIATAIGLTNAQAEQEA--GEE 133
Query: 138 MITTCDVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 134 EQGEYDFVVSRAVMPLPELMK 154
>gi|152978018|ref|YP_001343647.1| glucose-inhibited division protein B [Actinobacillus succinogenes
130Z]
gi|171472939|sp|A6VL65|RSMG_ACTSZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|150839741|gb|ABR73712.1| methyltransferase GidB [Actinobacillus succinogenes 130Z]
Length = 211
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW+K NL S ++ ++H+ DSL V +ID+G+G G PG+ +I +
Sbjct: 41 KWNKAYNLTSVRDPQEMLVKHILDSLVVSPYL-RGERFIDVGTGPGLPGLPLAIINPDKK 99
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S K+ SF+R V++ + R++E D + +RA A L +
Sbjct: 100 ---FVLLDSLGKRMSFIRNAVRELELTNVEPVLSRVEEYI-PDHKFDGVLSRAFASLKDM 155
Query: 157 LEYSFPW 163
++
Sbjct: 156 TDWCSHL 162
>gi|300934356|ref|ZP_07149612.1| 16S rRNA methyltransferase GidB [Corynebacterium resistens DSM
45100]
Length = 219
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ V W RHV +S + + P +D+GSG G PGI +I + V L+
Sbjct: 45 LIGPREVPRIWERHVLNSAALEEAIPRDVRVVDVGSGAGLPGIPLAIARPDLN---VQLL 101
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFP 162
E ++ +L +V++ V R ++ + + DV+++RA+A L L +S P
Sbjct: 102 EPLLRRTVYLDEIVRELGLNCSVHRGRAEDPNVVKELGGADVVTSRAVAPLGKLTTWSLP 161
Query: 163 WLY 165
+
Sbjct: 162 LVR 164
>gi|307699839|ref|ZP_07636890.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris FB024-16]
gi|307614877|gb|EFN94095.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris FB024-16]
Length = 224
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
+ YF L + LV W RH+ + + P + D+GSG G
Sbjct: 30 QRNAMRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGL 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCD 143
PG++ +I ++ V LIES +K+ +L +V + +V R ++
Sbjct: 90 PGLVLAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDLHG-KEHFP 145
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
++ARA+ +L TLL + P + K
Sbjct: 146 FVTARAVGNLSTLLGWVAPLVRPK 169
>gi|306817496|ref|ZP_07451240.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris ATCC 35239]
gi|304649720|gb|EFM47001.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris ATCC 35239]
Length = 224
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
+ YF L + LV W RH+ + + P + D+GSG G
Sbjct: 30 QRNAMRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGL 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCD 143
PG++ +I ++ V LIES +K+ +L +V + +V R ++
Sbjct: 90 PGLVLAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDLHG-KEHFP 145
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
++ARA+ +L TLL + P + K
Sbjct: 146 FVTARAVGNLSTLLGWVAPLVRPK 169
>gi|311109649|ref|YP_003982502.1| methyltransferase [Achromobacter xylosoxidans A8]
gi|310764338|gb|ADP19787.1| methyltransferase GidB [Achromobacter xylosoxidans A8]
Length = 229
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 13/165 (7%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D L T+ KL + +W++ NL + + I+H+ DSL
Sbjct: 10 ADMAGRLSRACEQLGLEADAATMAKLLNYLSQMQRWNRTYNLTAIRDPQQMLIQHLFDSL 69
Query: 64 RVFQLHPY-------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
P+ D+GSGGG PG++ +I V +++ KK +F+R
Sbjct: 70 AAVGPFNEALGASGTPAKVYDVGSGGGLPGVVLAIMRPHW---SVTCVDAVEKKTAFVRQ 126
Query: 117 VVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ A + RI+ C+++++RA A LD + +
Sbjct: 127 MSGVLALPNLQASHARIETL--TPAECNIVTSRAFASLDDFAQLA 169
>gi|88807344|ref|ZP_01122856.1| putative glucose inhibited division protein B [Synechococcus sp. WH
7805]
gi|88788558|gb|EAR19713.1| putative glucose inhibited division protein B [Synechococcus sp. WH
7805]
Length = 254
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWIDLGS 80
E+L L W+ ++NL EDFWI V DSL + P ID+G+
Sbjct: 26 QREQLITLQQLLRDWNSRVNLTRLIEGEDFWIAQVLDSLWPLKAELDTANKPRRCIDVGT 85
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--ARGKVFACRIQEAPQM 138
GGGFPG+ +I L G V L++S +K + + + + R V R++ Q
Sbjct: 86 GGGFPGLAVAIALP---GAEVTLVDSVGRKTAAVAAMARSLGMAERVSVRTERVERTGQD 142
Query: 139 ---ITTCDVISARALADLDTLLEYSFPWLY 165
D+ ARA+A + EY P L+
Sbjct: 143 PTCRGRFDLAMARAVASAPVVAEYLVPLLH 172
>gi|317503188|ref|ZP_07961249.1| glucose inhibited division protein B [Prevotella salivae DSM 15606]
gi|315665691|gb|EFV05297.1| glucose inhibited division protein B [Prevotella salivae DSM 15606]
Length = 209
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWID 77
+++ ++ E L+ W+ KIN++S +++ + HV SL + ++ + + +D
Sbjct: 11 DLTDLQCQQYEMLDALYRDWNSKINVISRKDIDNLYEHHVLHSLAIAKVLRFKPSTEILD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPGI +I +LI+ KK + + R E +
Sbjct: 71 FGTGGGFPGIPLAIMFPQCR---FHLIDGIGKKIRVATEISKAIGLTNVEALQRRGE--E 125
Query: 138 MITTCDVISARALADLDTLLEY 159
D + +RA+ L L++
Sbjct: 126 ETRKFDFVVSRAVMPLPDLMKL 147
>gi|296445003|ref|ZP_06886964.1| methyltransferase GidB [Methylosinus trichosporium OB3b]
gi|296257424|gb|EFH04490.1| methyltransferase GidB [Methylosinus trichosporium OB3b]
Length = 221
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWI 76
R + + E + L KW K NLV++ T+ W RH DS ++ P W
Sbjct: 22 RSHIREFETYEALLRKWQKSTNLVAAGTLPHLWTRHFADSAQILDAFPNIDAVSKIETWA 81
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-A 135
DLG+G GFPG++ +I L G V+LIES +K SFLR V ++T A ++ RI+
Sbjct: 82 DLGAGAGFPGMVLAICLKDRPGARVHLIESDQRKVSFLRAVSRETGAAAEIHLGRIESIL 141
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + ++ARALA L L+++S L +
Sbjct: 142 PSLEDRVVGVTARALAPLSQLVDWSRELLLK 172
>gi|256786607|ref|ZP_05525038.1| 16S rRNA methyltransferase GidB [Streptomyces lividans TK24]
Length = 223
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 11 RYAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 70
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 71 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLPPVHVVTARA 127
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 128 VAPLDRLATWGIPLLRP 144
>gi|213966254|ref|ZP_03394438.1| 16S rRNA methyltransferase GidB [Corynebacterium amycolatum SK46]
gi|213951106|gb|EEB62504.1| 16S rRNA methyltransferase GidB [Corynebacterium amycolatum SK46]
Length = 227
Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E ++ ++ + + L+ W RH+ +S V + + D+GSG G
Sbjct: 32 ENADRAYRYHSWLAEEATVRGLIGPRETPKLWDRHIINSAVVGEAIGKGLVVADIGSGAG 91
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMIT 140
PGI ++ ++ V L+E ++ +FL VV+ V R +E +
Sbjct: 92 LPGIPLALARPDLK---VVLVEPLLRRTTFLNEVVKDLELDNVTVVRGRAEEKAVRAEVG 148
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A L L +S P +
Sbjct: 149 QVDVVTSRAVAPLGKLAGWSLPLVK 173
>gi|256823851|ref|YP_003147814.1| methyltransferase GidB [Kangiella koreensis DSM 16069]
gi|256797390|gb|ACV28046.1| methyltransferase GidB [Kangiella koreensis DSM 16069]
Length = 214
Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ S+E E+L + L LKW+K NL + + ++ H+ DS+ V S +D
Sbjct: 20 GIDSSKEESERLLNYLSLLLKWNKAFNLTAITNPKEALDLHLLDSVAVSPAIKDYSSLLD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGG PGI +I + L+++ +KK FL+ VV + V R+Q+
Sbjct: 80 VGTGGGLPGIPLAILNPEKQ---FTLLDTNSKKTRFLKQVVYELGLNNVTVINQRVQDFE 136
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
I +RA A L +++++ L +
Sbjct: 137 NQSG-YACILSRAFASLSDMVQWTGHLLTE 165
>gi|21222292|ref|NP_628071.1| 16S rRNA methyltransferase GidB [Streptomyces coelicolor A3(2)]
gi|7387701|sp|O54571|RSMG_STRCO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|2898105|gb|AAC03485.1| GidB-like [Streptomyces coelicolor A3(2)]
gi|4808381|emb|CAB42703.1| conserved hypothetical GidB-family protein [Streptomyces coelicolor
A3(2)]
Length = 239
Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|300728002|ref|ZP_07061380.1| methyltransferase GidB [Prevotella bryantii B14]
gi|299774844|gb|EFI71458.1| methyltransferase GidB [Prevotella bryantii B14]
Length = 189
Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGG 83
+E+L+ L+ W+ KIN++S +++ + HV SL + + + + +D G+GGG
Sbjct: 1 MEQLD---ELYRDWNSKINVISRKDIDNLYEHHVLHSLAIAKYINFKSGTKVLDFGTGGG 57
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTC 142
FPGI +I ++ LI+ KK V + R +E
Sbjct: 58 FPGIPLAILFPEVK---FRLIDGTGKKIRVATEVANAIGLKNVDAVHLRGEE---EKGKY 111
Query: 143 DVISARALADLDTLLE 158
D + +RA+ L L++
Sbjct: 112 DFVVSRAVMPLPDLMK 127
>gi|260885222|ref|ZP_05896795.1| 16S rRNA methyltransferase GidB [Prevotella tannerae ATCC 51259]
gi|260853054|gb|EEX72923.1| 16S rRNA methyltransferase GidB [Prevotella tannerae ATCC 51259]
Length = 210
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E + E L+ W+ KIN++S +++ + HV SL + + + + +D
Sbjct: 13 SLTPEQRVQFEQLDALYHDWNSKINVISRKDIDNLYEHHVLHSLGIAKALRFRPETEVMD 72
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
LG+GGGFPGI +I + L++S KK V++ + F + E
Sbjct: 73 LGTGGGFPGIPLAILFPEVR---FTLLDSIGKKIKVASAVIEALNLQNVKAFHRNVIEEK 129
Query: 137 QMITTCDVISARALADLDTL 156
Q D I +RA+ L +
Sbjct: 130 Q---KFDFIVSRAVMPLPDM 146
>gi|172041700|ref|YP_001801414.1| glucose-inhibited division protein B [Corynebacterium urealyticum
DSM 7109]
gi|171853004|emb|CAQ05980.1| glucose-inhibited division protein B [Corynebacterium urealyticum
DSM 7109]
Length = 271
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + + L+ V W RH+ +S + ++ ID+GSG G PGI
Sbjct: 81 ERYAQWLETAGIQRGLIGPREVPRIWDRHIMNSAVLEEIIEDGERVIDVGSGAGLPGIPL 140
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVIS 146
+I +++ V L+E ++ FL VV+ +V R +E + + DV++
Sbjct: 141 AIARPNVK---VQLLEPLLRRTKFLEEVVEDLGLDNVEVHRGRAEEKAIVRKLAGADVVT 197
Query: 147 ARALADLDTLLEYSFPW 163
+RA+A L L ++S P
Sbjct: 198 SRAVAPLGRLCQWSLPL 214
>gi|148653200|ref|YP_001280293.1| 16S rRNA methyltransferase GidB [Psychrobacter sp. PRwf-1]
gi|189040712|sp|A5WFA2|RSMG_PSYWF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148572284|gb|ABQ94343.1| methyltransferase GidB [Psychrobacter sp. PRwf-1]
Length = 225
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+Y + +++L ++S E KL + L W+K NL + ++ I+HV D
Sbjct: 13 QYDELDTLLLEAITQLKIDISAEQRRKLLLYLDKLLFWNKAYNLTAIKQPKEALIKHVID 72
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + H P +D+G+G G PG+I +I + +++S KK F+R + +
Sbjct: 73 CLAILP-HLKPGKLLDIGTGAGLPGVIVAICEPE---RPITVLDSNQKKIRFIRQSISEL 128
Query: 122 AARGKV-FACRIQEA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A RI+ P V+++RA A L +E + P L Q
Sbjct: 129 QVTNVTPVASRIENFNPDEGDKFAVVTSRAFASLTDFVEAAAPRLAQ 175
>gi|297627569|ref|YP_003689332.1| methyltransferase gidB (glucose-inhibited division protein B)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296923334|emb|CBL57934.1| Methyltransferase gidB (Glucose-inhibited division protein B)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 261
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Query: 24 ETLEKLEYFYFLFL----KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+ E + + + + +W L+ E W RH+ + + ++ +D+G
Sbjct: 71 DQFESMSGYVDILVGQGVEWG----LLGPREPERIWSRHIMNCAALLEVIGEGVDVLDVG 126
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG G PG++ +I + V L+E ++ +FL+ V + G+V R A +
Sbjct: 127 SGAGLPGLVIAIARPDLN---VTLLEPLLRRFNFLKEAVDELGLDGQVLVER-GRAEDLK 182
Query: 140 TTCDVISARALADLDTLLEYSFPW 163
DV++ RA+A L LL ++ P
Sbjct: 183 QHFDVVTCRAVARLPKLLGWTMPL 206
>gi|319440492|ref|ZP_07989648.1| glucose-inhibited division protein B [Corynebacterium variabile DSM
44702]
Length = 221
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+ + L+ V+ W RH+ +S + ++ + +D+GSG G
Sbjct: 25 DRLDLAVRYAGWLADAGVVRGLIGPREVDRLWDRHILNSAVIGEVIDDGARVVDIGSGAG 84
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMIT 140
PGI +I + V L+E ++A+FL VV+ +V R +E +
Sbjct: 85 LPGIPLAIARPDLR---VQLVEPLLRRATFLSEVVEDLGLDNVEVHRGRAEEKSIVTAVG 141
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A + L+ +S P +
Sbjct: 142 GADVVTSRAVAPVGRLMGWSLPLARK 167
>gi|258655506|ref|YP_003204662.1| methyltransferase GidB [Nakamurella multipartita DSM 44233]
gi|258558731|gb|ACV81673.1| methyltransferase GidB [Nakamurella multipartita DSM 44233]
Length = 262
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
++ + L L+ + W RH+ + + L P+ + +D+GSG G
Sbjct: 41 QVQTARAYARLLATDGVIRGLIGPRETDRLWTRHLLNCAALTDLIPHGARLVDVGSGAGL 100
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCD 143
PG++ +I ++ V L+E ++ FL + + +V R Q+A D
Sbjct: 101 PGLVLAIARPDVQ---VILVEPLERRVRFLLEAIDRLELDNCEVVRSRAQDAGPSAGGAD 157
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
++ +RA+A L L + +
Sbjct: 158 LVVSRAVAPLGRLAGWCSGLVRP 180
>gi|254524201|ref|ZP_05136256.1| methyltransferase GidB [Stenotrophomonas sp. SKA14]
gi|219721792|gb|EED40317.1| methyltransferase GidB [Stenotrophomonas sp. SKA14]
Length = 212
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L +W+ NL + ++ RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLALLHRWNGTYNLTAIRDPQEMVTRHLLDSLAMQPFV-ADGSLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R V++ A EA D ++AR
Sbjct: 90 LAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGRYDQLTAR 146
Query: 149 ALADLDTLL 157
A +DTL
Sbjct: 147 A---MDTLA 152
>gi|305664499|ref|YP_003860786.1| glucose-inhibited division protein B [Maribacter sp. HTCC2170]
gi|88708516|gb|EAR00752.1| glucose-inhibited division protein B [Maribacter sp. HTCC2170]
Length = 221
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 10 LRANYLLNTY-NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++A + + N+S + L+ W+ KIN+VS +++ ++RHV SL + ++
Sbjct: 11 MKAELVFKYFPNLSEAQKTQFIRLEELYKDWNLKINVVSRKDIDELYLRHVLHSLGIAKI 70
Query: 69 HPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +D+G+GGGFPGI +I + L++S KK ++ VV+
Sbjct: 71 QEFKPGASILDVGTGGGFPGIPLAILFPEAD---FTLVDSIGKKVKVVQEVVEGLGIENV 127
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEY 159
R++E D I +RA+A + T + +
Sbjct: 128 TSINSRVEEV---NGRYDFIVSRAVAAMPTFVHW 158
>gi|227876535|ref|ZP_03994646.1| possible S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Mobiluncus mulieris ATCC
35243]
gi|269977735|ref|ZP_06184695.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris 28-1]
gi|227842849|gb|EEJ53047.1| possible S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Mobiluncus mulieris ATCC
35243]
gi|269934039|gb|EEZ90613.1| 16S rRNA methyltransferase GidB [Mobiluncus mulieris 28-1]
Length = 224
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
+ YF L + LV W RH+ + + P + D+GSG G
Sbjct: 30 QRNAMRYFVELLCHEGLERGLVGPKEPARIWSRHILNCAVLSDFLPECTSVADVGSGAGL 89
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCD 143
PG++ +I ++ V LIES +K+ +L +V + +V R ++
Sbjct: 90 PGLVLAIARPDLD---VTLIESMDKRCQWLEWVSAELDLDNVRVLRARAEDLHG-KEHFP 145
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
++ARA+ +L TLL + P + K
Sbjct: 146 FVTARAVGNLSTLLGWVAPLVRSK 169
>gi|188587517|ref|YP_001919062.1| methyltransferase GidB [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179352204|gb|ACB86474.1| methyltransferase GidB [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 250
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDLGSGGGF 84
E + L W+KK NL +++ + ++ H DSL + +DLGSG GF
Sbjct: 34 ESFIVYKEELLDWNKKFNLTRTTSDQGIYLEHFLDSLIPLKYTIIDDYETMLDLGSGPGF 93
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ---MIT 140
PG+ + I+ L+ES KK FL+ +++K +V+ R +E
Sbjct: 94 PGLPLKLAKPGIKT---CLLESNFKKVRFLKALIRKLEIPEIEVYHVRAEELAHDQLHRN 150
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
++ RA++ L+ + E S P+L +
Sbjct: 151 GYSLVVNRAVSSLNVVSEISLPFLNR 176
>gi|239980793|ref|ZP_04703317.1| glucose-inhibited division protein B [Streptomyces albus J1074]
gi|291452652|ref|ZP_06592042.1| methyltransferase gidB [Streptomyces albus J1074]
gi|291355601|gb|EFE82503.1| methyltransferase gidB [Streptomyces albus J1074]
Length = 235
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 8/163 (4%)
Query: 9 ILRANYLLNTYNVSRETL-EKL---EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ A L V+RE E+ + L + L+ V W RH+ +
Sbjct: 1 MTEAAELPEAPAVAREVFGERFPDAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAV 60
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ + D+GSG G PGI ++ + + L+E ++ +FL VV+
Sbjct: 61 LSEAIDEGVSVCDVGSGAGLPGIPLALVRPDL---TITLLEPLLRRTTFLTEVVELLGLD 117
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R +E + V++ARA+A L+ L + P L
Sbjct: 118 HVTVVRGRAEEVLGKLPPVHVVTARAVAPLERLAGWGVPLLRP 160
>gi|302543971|ref|ZP_07296313.1| 16S rRNA methyltransferase GidB [Streptomyces hygroscopicus ATCC
53653]
gi|302461589|gb|EFL24682.1| 16S rRNA methyltransferase GidB [Streptomyces himastatinicus ATCC
53653]
Length = 237
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYGELLADVGVTRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ + + L+E ++ +FLR VV+ V R +E + V++ARA
Sbjct: 87 LTRPDLR---ITLLEPLLRRTNFLREVVELLGLEHVTVVRGRAEEVLGKLPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLRP 160
>gi|92115409|ref|YP_575337.1| methyltransferase GidB [Chromohalobacter salexigens DSM 3043]
gi|122419018|sp|Q1QSC0|RSMG_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91798499|gb|ABE60638.1| 16S rRNA m(7)G-527 methyltransferase [Chromohalobacter salexigens
DSM 3043]
Length = 208
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A V E+L L KW++ NL + E RH+ DS V
Sbjct: 9 LDAGLAELGLEVDATARERLLALLALLHKWNRAYNLTAVRDPEQMVTRHLLDSASVATAV 68
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
P +D+G+G G PG++ +I S+E V +++ KK F R V +
Sbjct: 69 RGP-RLLDVGAGAGLPGLVLAILDPSLE---VTMLDGNGKKVRFQRQAVLELGLENVTPV 124
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++ D I +RA A L T +E + P L +
Sbjct: 125 QARVEHF--TTRDFDQIVSRAFAQLATFVELTRPLLAE 160
>gi|260221688|emb|CBA30503.1| Ribosomal RNA small subunit methyltransferase G [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 224
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 20/164 (12%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---------- 67
N+ L + L KW+K NL + ++ H+ DSL V
Sbjct: 17 GLNLDAAQQAALLEYLALIQKWTKVYNLTAVRNPDEMLTHHLLDSLAVIAPLQKQLAALK 76
Query: 68 ---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+GSG G PGI+ +I I V+ +++ KKA+F++ V
Sbjct: 77 EQGVFGDKPRLLDVGSGAGLPGIVIAICCPHI---TVHCVDTVAKKAAFIQQVAVTLKLP 133
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R++ + DV+S+RA A L +S L ++
Sbjct: 134 NLRGIHARVE---SLTEPYDVVSSRAFASLVDFTTWSEKALAEQ 174
>gi|72163511|ref|YP_291168.1| 16S rRNA methyltransferase GidB [Thermobifida fusca YX]
gi|123628492|sp|Q47K77|RSMG_THEFY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71917243|gb|AAZ57145.1| Glucose inhibited division protein [Thermobifida fusca YX]
Length = 237
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
ETL + + L L+ V W RH+ + V +L P + IDLGSG G
Sbjct: 17 ETLPVAQRYAELLADVGVARGLIGPREVPRLWERHLMNCAVVEELIPKGADVIDLGSGAG 76
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG++ +I + V L+E ++ FL V+ +V+ R +E +
Sbjct: 77 LPGVVLAILRPDL---SVTLLEPLLRRTVFLNECVELLRLDNVRVYRGRAEEVHAKL-RA 132
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D+++ARA+A L L+ ++ P L +
Sbjct: 133 DIVTARAVAPLPKLIGWALPLLRK 156
>gi|257070286|ref|YP_003156541.1| glucose-inhibited division protein B [Brachybacterium faecium DSM
4810]
gi|256561104|gb|ACU86951.1| glucose-inhibited division protein B [Brachybacterium faecium DSM
4810]
Length = 221
Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYPSIWIDLGSGG 82
E LE E F L + L+ V+ W RH+ + L V + P S D+GSG
Sbjct: 18 ERLELAERFVALLADQGPERGLIGPREVDRLWERHLLNCALMVDAIDPSASTLADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
G PG++ +I ++ V LIE+ ++ ++L V + +V R +E +
Sbjct: 78 GLPGVVIAIARPDLQ---VTLIETMQRRTTWLEEVDAELGLGIEVVRARAEELHGHR-SF 133
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
+V++ARA+A LD L ++ P +
Sbjct: 134 EVVTARAVAALDKLARWTLPLVAD 157
>gi|299142647|ref|ZP_07035777.1| 16S rRNA methyltransferase GidB [Prevotella oris C735]
gi|298575862|gb|EFI47738.1| 16S rRNA methyltransferase GidB [Prevotella oris C735]
Length = 209
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWID 77
+++ + L+ W+ KIN++S + + + HV SL + + + +D
Sbjct: 11 HLTEVQSRQFAMLDALYRDWNSKINVISRKDINNLYEHHVLHSLAIAKAIRFKEGTEILD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPGI +I LI+ KK V Q R E +
Sbjct: 71 FGTGGGFPGIPLAIMFPQCR---FRLIDGTGKKIRVATEVAQAIGLTNVEALHRRGE--E 125
Query: 138 MITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 126 EKGKYDFIVSRAVMQLPDLMK 146
>gi|302535579|ref|ZP_07287921.1| 16S rRNA methyltransferase GidB [Streptomyces sp. C]
gi|302444474|gb|EFL16290.1| 16S rRNA methyltransferase GidB [Streptomyces sp. C]
Length = 245
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L K L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 34 RYAELLADAGVKRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 93
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 94 LVRRDLK---ITLLEPLLRRTTFLQEVVELLGLDHVTVVRGRAEEVLGKLQPVHVVTARA 150
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 151 VAPLDRLAGWGVPLLRP 167
>gi|307330011|ref|ZP_07609163.1| methyltransferase GidB [Streptomyces violaceusniger Tu 4113]
gi|306884387|gb|EFN15421.1| methyltransferase GidB [Streptomyces violaceusniger Tu 4113]
Length = 237
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYGELLADVGVTRGLIGPREVPRLWERHLLNCAVLSEVVPEEVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FLR VV+ V R +E +T V++ARA
Sbjct: 87 LTRPDLQ---ITLLEPLLRRTNFLREVVELLGLEHVTVVRGRAEEVLGKLTPMHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLRP 160
>gi|332654804|ref|ZP_08420546.1| 16S rRNA methyltransferase GidB [Ruminococcaceae bacterium D16]
gi|332516147|gb|EGJ45755.1| 16S rRNA methyltransferase GidB [Ruminococcaceae bacterium D16]
Length = 237
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLG 79
V E+L + L L+ ++ +NL + + H+ DS + + +D+G
Sbjct: 18 VPEHAPEQLAEYGRLMLEKNQVMNLTAIREEDGVARLHMLDSAALLNWGDFEGKTLLDVG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---A 135
+G G PG+ I + S++ V L++S NK+ +L V + G + R +E
Sbjct: 78 TGAGLPGLPLKILVPSLQ---VTLLDSLNKRVDWLNEVCAQLGLEGIQAVHARAEEQALV 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
DV++ARA+A+L L E P++
Sbjct: 135 KGWRDGFDVVTARAVAELRLLCELCLPFVK 164
>gi|190576401|ref|YP_001974246.1| 16S rRNA methyltransferase GidB [Stenotrophomonas maltophilia
K279a]
gi|229890174|sp|B2FNF9|RSMG_STRMK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|190014323|emb|CAQ47970.1| putative glucose inhibited division protein B [Stenotrophomonas
maltophilia K279a]
Length = 212
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L +W+ NL + ++ RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLALLHRWNGTYNLTAIRDPQEMVTRHLLDSLAMQPFV-ADGSLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R V++ A EA D ++AR
Sbjct: 90 LAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGRYDQLTAR 146
Query: 149 ALADLDTLL 157
A +DTL
Sbjct: 147 A---MDTLA 152
>gi|281425234|ref|ZP_06256147.1| 16S rRNA methyltransferase GidB [Prevotella oris F0302]
gi|281400700|gb|EFB31531.1| 16S rRNA methyltransferase GidB [Prevotella oris F0302]
Length = 209
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWID 77
+++ + L+ W+ KIN++S + + + HV SL + + + +D
Sbjct: 11 HLTEVQSRQFAMLDALYRDWNSKINVISRKDINNLYEHHVLHSLAIAKAIRFKEGTEILD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
G+GGGFPGI +I LI+ KK V Q R E +
Sbjct: 71 FGTGGGFPGIPLAIMFPQCR---FRLIDGTGKKICVATEVAQAIGLTNVEALHRRGE--E 125
Query: 138 MITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 126 EKGKYDFIVSRAVMQLPDLMK 146
>gi|269468171|gb|EEZ79870.1| methyltransferase GidB [uncultured SUP05 cluster bacterium]
Length = 204
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+L+ +S + ++L + L KW+K NL + +E +H+ DSL +
Sbjct: 6 QLLQDGADQMGLLLSDQQSDQLLDYLMLIFKWNKTYNLSAIRDLESGVKKHLLDSLSILP 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+D+G+G G PGI+ +I + V++++S KK F+++ +
Sbjct: 66 YI-GNEPLLDVGAGAGLPGIVLAIVRPEL---SVSVLDSVGKKCRFMQFAKTQLKLDNLT 121
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V R+++ Q + I++RA A++D L+ + L
Sbjct: 122 VVNQRVEDF-QAMKCFTQITSRAFAEVDKTLKLTQHLL 158
>gi|313159131|gb|EFR58506.1| 16S rRNA methyltransferase GidB [Alistipes sp. HGB5]
Length = 207
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWID 77
++ ++ Y L+ W+ KIN+VS + ++RHV SL + ++ + +D
Sbjct: 10 ELTDCQRQRFAALYDLYADWNAKINVVSRKDFDQLYLRHVLHSLAIAKVCAFDAGARILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G GGGFP + +I ++S KK + + V R + R + P
Sbjct: 70 VGCGGGFPSVPLAILFPEAR---FTAVDSIRKKIAVVEGVTAGLGLRNLEPRCARAETLP 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA+ + + +
Sbjct: 127 ---ERYDYVVSRAVTAMSEFVNW 146
>gi|297158785|gb|ADI08497.1| 16S rRNA methyltransferase GidB [Streptomyces bingchenggensis
BCW-1]
Length = 237
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLADVGVTRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ + + L+E ++ +FL+ VV+ V R +E + V++ARA
Sbjct: 87 LTRPDLR---ITLLEPLLRRTNFLQEVVELLGLDHVTVVRGRAEEVLGKLPPMHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLAGWGVPLLRP 160
>gi|282856298|ref|ZP_06265579.1| 16S rRNA methyltransferase GidB [Pyramidobacter piscolens W5455]
gi|282585875|gb|EFB91162.1| 16S rRNA methyltransferase GidB [Pyramidobacter piscolens W5455]
Length = 228
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+ L S +T+ +L + L ++++ L E W H+ED L V L
Sbjct: 1 MEIQPLPPLPEPSAKTVTQLRRYASLLAVANERVRLTGPYDEETLWTDHIEDCLHVLPLL 60
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
P +D+G+GGG PG + ++ ++ L++S ++K L ++ +V
Sbjct: 61 PPSGTVVDVGTGGGLPGAVLAVCRPDLK---FTLLDSLSRKTKALAEIIAALKLPNAEVI 117
Query: 129 ACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R ++ A D RA+++ + EY P + +
Sbjct: 118 CMRSEDFAAARRERYDAAVVRAVSEAGVIAEYLAPLVRE 156
>gi|302559672|ref|ZP_07312014.1| methyltransferase GidB [Streptomyces griseoflavus Tu4000]
gi|302477290|gb|EFL40383.1| methyltransferase GidB [Streptomyces griseoflavus Tu4000]
Length = 238
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
E + L + + L+ V W RH+ + + ++ P D+GSG G P
Sbjct: 22 FEDAVRYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLP 81
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
GI ++ ++ + L+E ++ +FL VV+ V R +E +T V
Sbjct: 82 GIPLALVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKLTPVHV 138
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
++ARA+A LD L + P L
Sbjct: 139 VTARAVAPLDRLATWGIPLLRP 160
>gi|302552689|ref|ZP_07305031.1| 16S rRNA methyltransferase GidB [Streptomyces viridochromogenes DSM
40736]
gi|302470307|gb|EFL33400.1| 16S rRNA methyltransferase GidB [Streptomyces viridochromogenes DSM
40736]
Length = 238
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E I V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKIQPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|221069724|ref|ZP_03545829.1| methyltransferase GidB [Comamonas testosteroni KF-1]
gi|220714747|gb|EED70115.1| methyltransferase GidB [Comamonas testosteroni KF-1]
Length = 219
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L +++ ++ L F L KW+K NL S ++ H+ DSL
Sbjct: 9 LEQGVQALKLDLAPAQIDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPAL 68
Query: 70 PYPSI-----------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+D+GSGGG PG++ +I I+ VN +++ KKA+F++ V
Sbjct: 69 LRHVSSLRVEEGKRLPLLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAFIQQVA 125
Query: 119 QKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ R++ + T VIS RA A L +S
Sbjct: 126 ASLRLPNLRGIHDRVE---NLKTQYPVISCRAFASLVDFTTWS 165
>gi|313671979|ref|YP_004050090.1| methyltransferase gidb [Calditerrivibrio nitroreducens DSM 19672]
gi|312938735|gb|ADR17927.1| methyltransferase GidB [Calditerrivibrio nitroreducens DSM 19672]
Length = 198
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYPSIW 75
N +V+ EKL +FY+L L + NL S E F+I+H DS+ F+ H P +
Sbjct: 4 NYISVTDLQAEKLAHFYYLHL--NATFNLTSIKDREQFYIKHFLDSIYFFKNHTPSFNTL 61
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+GSGGGFPG++ +I E + L ES KKA FL++ + + + V RI+E
Sbjct: 62 CDIGSGGGFPGVVIAIFYPDAE---IFLCESIKKKAEFLKFAAHELSLKNIVVLNSRIEE 118
Query: 135 APQMITTCDVISARALADLDTLLE 158
D +AR +A + +L+
Sbjct: 119 LKSYR--FDFFTARGVAKVLDILK 140
>gi|297572338|ref|YP_003698112.1| methyltransferase GidB [Arcanobacterium haemolyticum DSM 20595]
gi|296932685|gb|ADH93493.1| methyltransferase GidB [Arcanobacterium haemolyticum DSM 20595]
Length = 216
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L F L + L+ + W RH+ +S + P + +D+GSG GFPG++
Sbjct: 29 LLRFGELLESEGELRGLIGPRERDKLWSRHILNSTAIVDFLPQNASLVDVGSGAGFPGLV 88
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I + VNL++S ++ +L YVV + E + + DV +AR
Sbjct: 89 AAIIRPDL---TVNLVDSLGRRTDWLSYVVDDLQLSNVTVHNKRAEEMVGVISADVATAR 145
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L LL ++ P +
Sbjct: 146 AVAALKKLLPWTMPLVRP 163
>gi|118594207|ref|ZP_01551554.1| methyltransferase GidB [Methylophilales bacterium HTCC2181]
gi|118439985|gb|EAV46612.1| methyltransferase GidB [Methylophilales bacterium HTCC2181]
Length = 206
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
ILR + S + KL + + LKW+K NL + + I H+ DSL V Q
Sbjct: 6 EILRQGIEQLGLSDSNNIVHKLLIYKDILLKWNKSFNLTAMRDEKTIIINHLLDSLSVVQ 65
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK- 126
L + +D+GSG G PGI+ ++ + + LI+ KKA F++ V + +
Sbjct: 66 LIKENEV-LDVGSGAGLPGIVLALHDPKKQ---ITLIDKVGKKAIFMKQVCLELEIKNVD 121
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
V R+++ D I ARA +++ L++ +
Sbjct: 122 VIHGRVEDM-DHTKKFDAIVARAFSEMQMLVDLT 154
>gi|330991275|ref|ZP_08315226.1| Ribosomal RNA small subunit methyltransferase G [Gluconacetobacter
sp. SXCC-1]
gi|329761294|gb|EGG77787.1| Ribosomal RNA small subunit methyltransferase G [Gluconacetobacter
sp. SXCC-1]
Length = 208
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 59/153 (38%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L + +VSRET E+LE + + L+W++KINLVS + W RH+ DSL++ L P +
Sbjct: 7 LPSGLDVSRETHERLERYADILLRWNQKINLVSPHDLPHLWSRHIADSLQLAALIPAGAP 66
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+GSGGGFPG++ + V LIES +KA+FLR + + +V A R++
Sbjct: 67 GLVDMGSGGGFPGLVIACAT----DARVTLIESDQRKAAFLREAARVAGVQVRVCAQRLE 122
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+A V++ARALA L LLE+ +L
Sbjct: 123 QADVPPAL--VVTARALAPLPLLLEWGARFLRP 153
>gi|284993434|ref|YP_003411989.1| methyltransferase GidB [Geodermatophilus obscurus DSM 43160]
gi|284066680|gb|ADB77618.1| methyltransferase GidB [Geodermatophilus obscurus DSM 43160]
Length = 223
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + L+ V W RH+ +S V P + +D+GSG G PGI
Sbjct: 33 ERYVARLATDGVTRGLIGPREVPRLWERHILNSAAVADAVPPGARVVDVGSGAGLPGIPL 92
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
++ + + L+E ++ FL VV + A +V R +E + DV++A
Sbjct: 93 ALARPDLR---LTLVEPMARRVEFLEEVVAELGAPWRVVRGRAEERSVRAAVGPVDVVTA 149
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L L+ + L
Sbjct: 150 RAVAALPRLVSWCRGLLRP 168
>gi|160872231|ref|ZP_02062363.1| methyltransferase GidB [Rickettsiella grylli]
gi|159121030|gb|EDP46368.1| methyltransferase GidB [Rickettsiella grylli]
Length = 214
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
N + VS++T ++L + L KW++ NL S +H+ DSL + P +
Sbjct: 18 NRFEVSKKTSQQLVDYVLLLHKWNQIHNLTSIRNPLQMLSKHIMDSLAISPYLRGP-HIL 76
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+G+G G PG+ ++ L++S KK FL Y++Q E
Sbjct: 77 DVGTGAGLPGLPLALTHPHYH---FTLLDSNGKKTRFLTYILQTLMISNVDIISLRVEKY 133
Query: 137 QMITTCDVISARALADLDTLL 157
+ + I +RA + L+ L
Sbjct: 134 DVKKCFNSIVSRAFSQLNNFL 154
>gi|71898518|ref|ZP_00680689.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|71731642|gb|EAO33702.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
Length = 254
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + +
Sbjct: 56 LEYGLDILELDRAYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTV 115
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ +
Sbjct: 116 G-RLADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEV 171
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA + ++ARAL L+ ++ L +
Sbjct: 172 RAEALDEALMYEHLTARALDTLNGIVTVGGHLLKSE 207
>gi|183985453|ref|YP_001853744.1| glucose-inhibited division protein B Gid [Mycobacterium marinum M]
gi|238690943|sp|B2HNT4|RSMG_MYCMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|183178779|gb|ACC43889.1| glucose-inhibited division protein B Gid [Mycobacterium marinum M]
Length = 228
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE + + + L+ V+ W RHV +S + +L +D+GSG G P
Sbjct: 17 LELAQRYADWLATAGVERGLLGPREVDRLWERHVLNSAVIGELLDQGERVVDIGSGAGLP 76
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCD 143
G+ +I ++ V L+E ++ FL+ VV +V R +E + + D
Sbjct: 77 GLPLAIARPDLQ---VVLLEPMLRRVEFLQEVVTDLGLAVEVVRGRAEERSVRERLGGSD 133
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
+RA+A LD L ++S P L ++
Sbjct: 134 AAVSRAVAALDKLTKWSMPLLKRE 157
>gi|290959010|ref|YP_003490192.1| glucose inhibited division protein [Streptomyces scabiei 87.22]
gi|260648536|emb|CBG71647.1| glucose inhibited division protein [Streptomyces scabiei 87.22]
Length = 238
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+V + E + L + + L+ V W RH+ + + ++ P D+G
Sbjct: 16 DVFGDRYEDAVRYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVG 75
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
SG G PGI ++ ++ + L+E ++ +FL VV+ V R +E
Sbjct: 76 SGAGLPGIPLALVRQDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVLGT 132
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V++ARA+A LD L + P L
Sbjct: 133 LQPVHVVTARAVAPLDRLAAWGIPLLRP 160
>gi|153206162|ref|ZP_01945425.1| methyltransferase GidB [Coxiella burnetii 'MSU Goat Q177']
gi|212217718|ref|YP_002304505.1| 16S rRNA methyltransferase GidB [Coxiella burnetii CbuK_Q154]
gi|226796821|sp|B6J8V2|RSMG_COXB1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120577292|gb|EAX33916.1| methyltransferase GidB [Coxiella burnetii 'MSU Goat Q177']
gi|212011980|gb|ACJ19360.1| methyltransferase [Coxiella burnetii CbuK_Q154]
Length = 204
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ V + + F KW++ NL + + ++ H+ DSL +
Sbjct: 5 LKQGIDQLGLKVPETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSILPYL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 65 K-GDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKITNVTII 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q D I+ RAL + ++E + L
Sbjct: 121 QERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLRP 157
>gi|206890813|ref|YP_002248427.1| methyltransferase GidB [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742751|gb|ACI21808.1| methyltransferase GidB [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 223
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 12 ANYLLNTYNVSRE--TLE----KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LR 64
++ L+N+ + + +E K ++ KW+K NL S ++ ++H DS L
Sbjct: 13 SSILINSLKLPDDDKQIEVLADKFLFYLSELKKWNKAYNLTSIEDEKEIIVKHFIDSLLY 72
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + P D+G+G GFPGI +I + + LIE KK +FL+ + +K
Sbjct: 73 LCFISENPLSIADIGTGAGFPGIPIAIVRPRAK---ITLIEPSWKKNAFLKNIKRKLELE 129
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + +E D++ +RAL + +++ L ++
Sbjct: 130 NIEIIKAKAEEIHN---KFDIVISRALWSIKDFIKHCNHLLKKE 170
>gi|326383903|ref|ZP_08205587.1| 16S rRNA methyltransferase GidB [Gordonia neofelifaecis NRRL
B-59395]
gi|326197362|gb|EGD54552.1| 16S rRNA methyltransferase GidB [Gordonia neofelifaecis NRRL
B-59395]
Length = 236
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + + ++ L+ + W RH+ + + ++ ID+GSG G PGI
Sbjct: 32 ERYADILVQQGVLRGLIGPRELPQLWTRHLLNCAVLSEVIDDSETVIDIGSGAGLPGIPL 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP--QMITTCDVIS 146
++ +E + LIE ++ +FL VV+ V R +E + + DV++
Sbjct: 92 AVARPDLE---ITLIEPLLRRTTFLDEVVEGLHLGNVTVIRGRAEEKAVLKQVRPADVVT 148
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L+ L +S P +
Sbjct: 149 SRAVAPLERLARWSAPLIR 167
>gi|325856871|ref|ZP_08172369.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola CRIS 18C-A]
gi|327314584|ref|YP_004330021.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola F0289]
gi|325483244|gb|EGC86221.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola CRIS 18C-A]
gi|326944705|gb|AEA20590.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Prevotella
denticola F0289]
Length = 207
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ E++ L+ W+ KIN+VS +++ + H+ SL + + + + +D
Sbjct: 11 HLTHRQEEQIAALDVLYHDWNAKINVVSRKDIDNLYEHHILHSLAIARRIRFREGTNVLD 70
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAP 136
G+GGGFPGI +I LI+ KK + V + R +E
Sbjct: 71 FGTGGGFPGIPLAILFPESN---FKLIDGTGKKVKVAKEVADSIGLDNVLPVHQRGEE-- 125
Query: 137 QMITTCDVISARALADLDTLLE 158
D I +RA+ L L++
Sbjct: 126 -EKGKFDFIVSRAVMPLPDLMK 146
>gi|194367739|ref|YP_002030349.1| 16S rRNA methyltransferase GidB [Stenotrophomonas maltophilia
R551-3]
gi|238693455|sp|B4SNP6|RSMG_STRM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|194350543|gb|ACF53666.1| methyltransferase GidB [Stenotrophomonas maltophilia R551-3]
Length = 212
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L +W+ NL + ++ RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLALLHRWNGTYNLTAIRDPQEMVTRHLLDSLAMQPFV-ADGSLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R V++ A EA D ++AR
Sbjct: 90 LAIACPGLQ---VTLVESNGKKARFMREAVRQLGLGNARVAESRAEALDEAGHYDQLTAR 146
Query: 149 ALADLDTLL 157
A +DTL
Sbjct: 147 A---MDTLA 152
>gi|38257425|sp|Q82FE3|RSMG_STRAW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 238
Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E I V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVIRGRAEEVMGKIPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|294630332|ref|ZP_06708892.1| methyltransferase GidB [Streptomyces sp. e14]
gi|292833665|gb|EFF92014.1| methyltransferase GidB [Streptomyces sp. e14]
Length = 238
Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E IT V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGKITPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|153827711|ref|ZP_01980378.1| methyltransferase GidB [Vibrio cholerae MZO-2]
gi|149737814|gb|EDM52719.1| methyltransferase GidB [Vibrio cholerae MZO-2]
Length = 139
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + V+ + E+L + L KW+K NL S + ++H+ DSL V H
Sbjct: 8 LDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-VVSPH 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-F 128
+ID+G+G G PGI +I E L++S K+ FL+ V+ +
Sbjct: 67 LVGERFIDVGTGPGLPGIPLAIMHPDKE---FVLLDSLGKRIRFLKQVIHDLKINNVLPV 123
Query: 129 ACRIQEA 135
R++E
Sbjct: 124 QSRVEEF 130
>gi|291303912|ref|YP_003515190.1| methyltransferase GidB [Stackebrandtia nassauensis DSM 44728]
gi|290573132|gb|ADD46097.1| methyltransferase GidB [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + L L+ V W RH+ + + +L + +D+GSG G PG++
Sbjct: 26 EKYAELLADDGVTRGLIGPREVPRLWERHLLNCAVLGELIEPEADVLDIGSGAGLPGLVL 85
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+I + +V L+E ++ FL + +V R +E + DV+++R
Sbjct: 86 AIVRPDV---VVTLVEPMARRTEFLTEATEALGLDNVEVLRARAEEV-KPRGRADVVTSR 141
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L L + P
Sbjct: 142 AVAPLGKLSHWCLPLARP 159
>gi|299531162|ref|ZP_07044574.1| 16S rRNA methyltransferase GidB [Comamonas testosteroni S44]
gi|298720865|gb|EFI61810.1| 16S rRNA methyltransferase GidB [Comamonas testosteroni S44]
Length = 220
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L ++ ++ L F L KW+K NL S ++ H+ DSL
Sbjct: 9 LEQGVQALKLELAPAQIDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPAL 68
Query: 70 ---------PYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+D+GSGGG PG++ +I I+ VN +++ KKA+F++ V
Sbjct: 69 LRHVNCLPQEEGKRLPLLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAFIQQVA 125
Query: 119 QKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ R++ + T VIS RA A L +S
Sbjct: 126 ASLRLPNLRGIHDRVE---NLKTRYPVISCRAFASLVDFTTWS 165
>gi|71275823|ref|ZP_00652107.1| Glucose inhibited division protein [Xylella fastidiosa Dixon]
gi|71902298|ref|ZP_00684288.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|170730196|ref|YP_001775629.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa M12]
gi|71163401|gb|EAO13119.1| Glucose inhibited division protein [Xylella fastidiosa Dixon]
gi|71727951|gb|EAO30174.1| Glucose inhibited division protein [Xylella fastidiosa Ann-1]
gi|167964989|gb|ACA11999.1| glucose inhibited division protein [Xylella fastidiosa M12]
Length = 238
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + +
Sbjct: 40 LEYGLDILELDRAYVVPLLAYLALLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTV 99
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
DLGSG G PGI +I ++ V L+ES KKA FLR VV++ +
Sbjct: 100 G-RLADLGSGPGLPGIPLAISCPPLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEV 155
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA + ++ARAL L+ ++ L +
Sbjct: 156 RAEALDEALMYEHLTARALDTLNGIVTVGGHLLKSE 191
>gi|313886704|ref|ZP_07820414.1| 16S rRNA methyltransferase GidB [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923866|gb|EFR34665.1| 16S rRNA methyltransferase GidB [Porphyromonas asaccharolytica
PR426713P-I]
Length = 224
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 12 ANYLLNTYN-VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
+ LL + +S ++L Y L+ W+ +IN++S +++ ++ HV SL + L P
Sbjct: 13 LDRLLRQFPALSPTAQQQLTALYPLYKGWNARINVISRRDIDNLYLHHVMHSLALAWLLP 72
Query: 71 YPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK- 126
D+G GGGFP I +I + LI+S KK + + +
Sbjct: 73 DEPTSYTIADVGCGGGFPSIPLAILYPQYQ---FLLIDSIAKKLHVAQAIADEIGLTNVS 129
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R++ CD I +RA L L EY+ L+
Sbjct: 130 THHTRVE---SCDLRCDYIVSRAAMPLGLLYEYTQHMLH 165
>gi|228471211|ref|ZP_04056024.1| 16S rRNA methyltransferase GidB [Porphyromonas uenonis 60-3]
gi|228307026|gb|EEK16108.1| 16S rRNA methyltransferase GidB [Porphyromonas uenonis 60-3]
Length = 224
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 12 ANYLLNTYN-VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP 70
+ LL + +S ++L Y L+ +W+ +IN++S +++ ++ HV SL + L P
Sbjct: 13 LDRLLRQFPALSPTATQQLTALYPLYREWNARINVISRRDIDNLYLHHVMHSLALAWLLP 72
Query: 71 YPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK- 126
D+G GGGFP I +I + LI+S KK + + +
Sbjct: 73 DEPTSFTIADVGCGGGFPSIPLAILFPQYQ---FLLIDSIAKKLHVAQSIADEIGLTNVS 129
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R++ CD + +RA L+ L +Y+ L+
Sbjct: 130 THHTRVE---SCDLCCDYVVSRAAMPLELLHKYTQHMLH 165
>gi|86608642|ref|YP_477404.1| 16S rRNA methyltransferase GidB [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123502737|sp|Q2JMA3|RSMG_SYNJB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86557184|gb|ABD02141.1| methyltransferase GidB [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 260
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-------P 70
+ S + ++L+ Y L + ++ NL + DFW +H+ DSLR +L
Sbjct: 26 GWQPSEQQQQQLQQLYPLVMAGNRTQNLTRITDPIDFWEKHLWDSLRGLRLLGSWEAIQA 85
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
P ID+G+G GFPGI I L L++S +K +F++ ++Q+ + + A
Sbjct: 86 QPWRGIDIGTGAGFPGIPAQIALPQTR---FTLLDSTQRKIAFVQDILQRLSLTQARAVA 142
Query: 130 CRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R + + PQ + D+ ARALA + EY P L
Sbjct: 143 QRAEIWGQDPQERGSYDIALARALASAEICAEYCLPLLK 181
>gi|256398141|ref|YP_003119705.1| 16S rRNA methyltransferase GidB [Catenulispora acidiphila DSM
44928]
gi|256364367|gb|ACU77864.1| methyltransferase GidB [Catenulispora acidiphila DSM 44928]
Length = 245
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + L+ V W RH+ + V L P D+GSG G PGI+ +
Sbjct: 40 RYAEILAGPGVTRGLLGPREVPRLWERHILNCAVVGGLLPADIQICDVGSGAGLPGIVLA 99
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARA 149
+ + V L+E ++ FL V+ +V R +E DV+++RA
Sbjct: 100 LARPDLS---VTLLEPLLRRTLFLDEVIDLLGLENVRVLRGRAEEFAG-KERFDVVTSRA 155
Query: 150 LADLDTLLEYSFPWLY 165
+A LD L +S P L
Sbjct: 156 VAPLDRLAGWSLPLLR 171
>gi|326329119|ref|ZP_08195448.1| 16S rRNA methyltransferase GidB [Nocardioidaceae bacterium Broad-1]
gi|325953201|gb|EGD45212.1| 16S rRNA methyltransferase GidB [Nocardioidaceae bacterium Broad-1]
Length = 237
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LE E + L+ V W RH+ + + ++ P D+GSG G
Sbjct: 18 DRLELAERYAAWLADAGVVRGLIGPREVPRLWDRHILNCAVLGEVIPEGVAVADIGSGAG 77
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG++ +I ++ + LIE ++ +FL V + +A D
Sbjct: 78 LPGLVLAIARPDLQ---ITLIEPLLRRTTFLEEVAEDLGLENVTVLRGRADAFHGELGFD 134
Query: 144 VISARALADLDTLLEYSFPWL 164
V+++RA+A L LL++S P +
Sbjct: 135 VVTSRAVAGLGKLLDWSMPLV 155
>gi|165918741|ref|ZP_02218827.1| methyltransferase GidB [Coxiella burnetii RSA 334]
gi|165917569|gb|EDR36173.1| methyltransferase GidB [Coxiella burnetii RSA 334]
Length = 204
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ V + + F KW++ NL + + ++ H+ DSL +
Sbjct: 5 LKQGIDQLGLKVPETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSILPYL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 65 K-GDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKITNVTII 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q D I+ RAL + ++E + L
Sbjct: 121 QERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLRP 157
>gi|9107033|gb|AAF84737.1|AE004013_3 glucose inhibited division protein [Xylella fastidiosa 9a5c]
Length = 238
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + +
Sbjct: 40 LEYGLDILELDRVYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTV 99
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ +
Sbjct: 100 G-RLADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEV 155
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA T + ++ARAL L+ ++ L +
Sbjct: 156 RAEALDEALTYEHLTARALDTLNGIVTVGGHLLKSE 191
>gi|83649684|ref|YP_438119.1| methyltransferase GidB [Hahella chejuensis KCTC 2396]
gi|123529921|sp|Q2S6N0|RSMG_HAHCH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83637727|gb|ABC33694.1| methyltransferase GidB [Hahella chejuensis KCTC 2396]
Length = 217
Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 6/152 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + ++ K+ + L KW+K NL + RH+ DSL
Sbjct: 11 LTSGLKAMGVKLAEVQQAKILRYLELLHKWNKAYNLTAVRDPVLHVSRHILDSLAALPYL 70
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
++D+G+G G PGI SI L L++S KK F+ +V
Sbjct: 71 K-GVQFLDVGAGAGLPGIPLSIALPESHWT---LLDSNGKKTRFMDQCRMDMGLPNLRVE 126
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
RI+ A D I +RA A + ++
Sbjct: 127 HTRIE-AFSPDVKFDGIISRAFATIGDMIAGC 157
>gi|148240387|ref|YP_001225774.1| methyltransferase gidB [Synechococcus sp. WH 7803]
gi|166224626|sp|A5GNG2|RSMG_SYNPW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147848926|emb|CAK24477.1| Methyltransferase gidB [Synechococcus sp. WH 7803]
Length = 254
Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPS 73
+ E+L L W+ ++NL EDFW+ V DSL + P
Sbjct: 19 GWTPDAGQREQLITLQELLRDWNTRVNLTRLVEGEDFWVTQVLDSLWPLKPELDTADTPR 78
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACR 131
ID+G+GGGFPG+ +I L G + L++S ++K + + + + R V R
Sbjct: 79 RCIDVGTGGGFPGLAVAIALP---GAELTLVDSVSRKTAAVAAMARSLGMADRVSVRTER 135
Query: 132 IQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
++ + P+ D+ ARA+A + EY P L+
Sbjct: 136 VERTGQDPRCRGQFDLALARAVASAPVVAEYLVPLLH 172
>gi|163732965|ref|ZP_02140409.1| methyltransferase GidB [Roseobacter litoralis Och 149]
gi|161393500|gb|EDQ17825.1| methyltransferase GidB [Roseobacter litoralis Och 149]
Length = 203
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 59/153 (38%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
++ VSRETL+ L ++ L LKW+ +INLVS S+++D W RH+ DS ++ W
Sbjct: 5 MDASTVSRETLDALRAYHELLLKWNSRINLVSKSSIDDVWQRHIWDSAQIVDCAEDVKTW 64
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLGSGGG PG++ +I + L+ES +KA+FLR V+++ + +V RI+
Sbjct: 65 VDLGSGGGLPGLVVAIMAKVADPNWKTILVESDQRKAAFLRTVIRELSLNARVIVDRIET 124
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ DV+SARALADL LL ++ L +
Sbjct: 125 VAPLR--ADVVSARALADLSVLLSFAHRHLSPQ 155
>gi|297200933|ref|ZP_06918330.1| 16S rRNA methyltransferase GidB [Streptomyces sviceus ATCC 29083]
gi|197716895|gb|EDY60929.1| 16S rRNA methyltransferase GidB [Streptomyces sviceus ATCC 29083]
Length = 238
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
E + L + + L+ V W RH+ + + ++ P D+GSG G PG
Sbjct: 23 EDAVRYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVI 145
I ++ ++ + L+E ++ +FL VV+ V R +E +T V+
Sbjct: 83 IPLALVREDLK---ITLLEPLLRRTTFLTEVVELLGLDHVTVVRGRAEEVMGKLTPVHVV 139
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ARA+A LD L + P L
Sbjct: 140 TARAVAPLDRLATWGVPLLRP 160
>gi|318058976|ref|ZP_07977699.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SA3_actG]
gi|318077330|ref|ZP_07984662.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SA3_actF]
gi|333025725|ref|ZP_08453789.1| putative 16S rRNA methyltransferase GidB [Streptomyces sp. Tu6071]
gi|332745577|gb|EGJ76018.1| putative 16S rRNA methyltransferase GidB [Streptomyces sp. Tu6071]
Length = 239
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 9 ILRANYLLNTYNVSR----ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ A L V+R E+ + L + L+ V W RH+ +
Sbjct: 1 MTEAAQLPPAPEVARQVFGESFADAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAV 60
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ ++ P D+GSG G PGI ++ ++ + L+E ++ +FL VV+
Sbjct: 61 LSEVVPEGVTVCDVGSGAGLPGIPLALVRRDLK---ITLLEPLLRRTNFLTEVVELLGLD 117
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R +E + V++ARA+A LD L + P L
Sbjct: 118 HVTVVRGRAEEVLGTLQPVHVVTARAVAPLDRLAGWGVPLLRP 160
>gi|300780163|ref|ZP_07090019.1| 16S rRNA methyltransferase GidB [Corynebacterium genitalium ATCC
33030]
gi|300534273|gb|EFK55332.1| 16S rRNA methyltransferase GidB [Corynebacterium genitalium ATCC
33030]
Length = 203
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ ++ + + + V W RH+ + + + D+GSG G PGI
Sbjct: 17 QAYHDSLATTAAQRGFIGPKEVPRLWDRHIFNCAVIGEAFKEGQRIADIGSGAGLPGIPL 76
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+I ++ + LIE K++++L VV++ V R +E +M+ D +++R
Sbjct: 77 AIARPDLD---ITLIEPLLKRSTYLGEVVEELGLDNVTVIRGRAEEQKKML--FDAVTSR 131
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L L +S P +
Sbjct: 132 AVAPLGKLASWSLPLVRP 149
>gi|329118277|ref|ZP_08246987.1| glucose inhibited division protein B [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465698|gb|EGF11973.1| glucose inhibited division protein B [Neisseria bacilliformis ATCC
BAA-1200]
Length = 210
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D+ L++ V+ E L + L KW+ NL + H+ DSL
Sbjct: 2 DAQQQLQSGIAAMGLAVAPERQALLLEYLALLEKWNAAFNLTALRDRAKMVSHHLLDSLT 61
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + ID+GSGGG PGI ++ + V L ++ KK +FL+ +
Sbjct: 62 LLPYLDGAATLIDVGSGGGMPGIPAAVCRPDL---AVTLCDANTKKTAFLQQAAIELGLD 118
Query: 125 GK-VFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
V A R+++ D++S+RA A+L + +
Sbjct: 119 NVSVAAGRVEKLAGK--QADIVSSRAFAELADFVSIT 153
>gi|194291176|ref|YP_002007083.1| 16S rRNA methyltransferase gidb [Cupriavidus taiwanensis LMG 19424]
gi|193225011|emb|CAQ71022.1| glucose-inhibited division protein, contains
S-adenosyl-L-methionine-dependent methyltransferase
domain [Cupriavidus taiwanensis LMG 19424]
Length = 242
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 61/168 (36%), Gaps = 14/168 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL------ 63
L A ++ ++ L + L KW+ NL + ++ H+ DSL
Sbjct: 20 LEAGLAEIGLALAPAQIDTLFAYLALLRKWNGVYNLTAIRHPDEMLTHHMLDSLAAVPAL 79
Query: 64 -----RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V P +D+GSGGG PG+ +I + V +++ KK +FL
Sbjct: 80 AQAARAVEVAAPARGRVLDVGSGGGMPGLPLAIACPDV---SVLMVDIVQKKTAFLTQCR 136
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E VI++RA A+L + S L
Sbjct: 137 AQLGLSNAAAHWGPVEKLDDADGFAVITSRAFAELTDFVNLSGQLLAP 184
>gi|329938644|ref|ZP_08288040.1| glucose inhibited division protein [Streptomyces griseoaurantiacus
M045]
gi|329302135|gb|EGG46027.1| glucose inhibited division protein [Streptomyces griseoaurantiacus
M045]
Length = 213
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 2 RYAELLAETGVQRGLIGPREVPRLWERHLLNCAVLSEVVPQSVTVCDVGSGAGLPGIPLA 61
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 62 LVREDLK---ITLLEPLLRRTNFLTEVVELLGLDHVTVVRGRAEEVMGQLPPVHVVTARA 118
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 119 VAPLDRLATWGIPLLRP 135
>gi|269217842|ref|ZP_06161696.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 848
str. F0332]
gi|269212777|gb|EEZ79117.1| 16S rRNA methyltransferase GidB [Actinomyces sp. oral taxon 848
str. F0332]
Length = 224
Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Query: 4 CDSNSIL-RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D N +L A + ++T ++L + + + + L+ ++ W RH+ +S
Sbjct: 5 VDDNGVLAEAPPSGGASHFGQDTWQQLVDYAGMLEREGELRGLLGPRELKRLWTRHLLNS 64
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + P+ + +D+GSG GFPG++ +I + + L++S ++A +L VV+ +
Sbjct: 65 MAILDFIPFEAKVVDVGSGAGFPGVVAAIVRKDLR---LVLVDSMERRARWLNDVVKDLS 121
Query: 123 ARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+V R ++ + D ++ARA+A L LL ++ P L
Sbjct: 122 LPNVEVVHARSEDLVGKVD-ADTVTARAVAALRKLLPWTMPLLK 164
>gi|302520507|ref|ZP_07272849.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB78]
gi|302429402|gb|EFL01218.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB78]
Length = 239
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 9 ILRANYLLNTYNVSR----ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ A L V+R E+ + L + L+ V W RH+ +
Sbjct: 1 MTEAAPLPPAPEVARQVFGESFADAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAV 60
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ ++ P D+GSG G PGI ++ ++ + L+E ++ +FL VV+
Sbjct: 61 LSEVVPEGVTVCDVGSGAGLPGIPLALVRRDLK---ITLLEPLLRRTNFLTEVVELLGLD 117
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R +E + V++ARA+A LD L + P L
Sbjct: 118 HVTVVRGRAEEVLGTLQPVHVVTARAVAPLDRLAGWGVPLLRP 160
>gi|154706726|ref|YP_001423622.1| 16S rRNA methyltransferase GidB [Coxiella burnetii Dugway
5J108-111]
gi|189039500|sp|A9KBS7|RSMG_COXBN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154356012|gb|ABS77474.1| methyltransferase [Coxiella burnetii Dugway 5J108-111]
Length = 204
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 4/157 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ V + + F KW++ NL + + ++ H+ DSL +
Sbjct: 5 LKQGIDQLGLKVPETIQQSMFAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSILPYL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 65 K-GDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKITNVTII 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q D I+ RAL + ++E + L
Sbjct: 121 QERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLRP 157
>gi|83596028|gb|ABC25386.1| methyltransferase [uncultured marine bacterium Ant39E11]
Length = 218
Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWID 77
+++E +E+L+ L+ +W+ +IN++S +E W RH+ SL + P ++ +D
Sbjct: 17 LTKEAIEQLQRLPNLYKEWNSRINVISRKDMELLWERHIFHSLTLGLAADFQPDMNV-LD 75
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
LG+GGGFPGI +I S++ L +S KK ++ V + A + RI+
Sbjct: 76 LGTGGGFPGIPLAIAFPSVQWT---LNDSMAKKIRVVQAVSEAMAIPNISAYHGRIE--- 129
Query: 137 QMITTCDVISARALADLDTLLEYS 160
++ D + RA+A LL ++
Sbjct: 130 KLKGPWDAVVTRAVAPASQLLTWT 153
>gi|295837763|ref|ZP_06824696.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB74]
gi|197698919|gb|EDY45852.1| 16S rRNA methyltransferase GidB [Streptomyces sp. SPB74]
Length = 239
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 9 ILRANYLLNTYNVSR----ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ A L V+R E+ + L + L+ V W RH+ +
Sbjct: 1 MTEAAQLPPAPEVARQVFGESFADAVRYAELLADAGVRRGLIGPREVPRLWERHLLNCAV 60
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ ++ P D+GSG G PGI ++ ++ + L+E ++ +FL VV+
Sbjct: 61 LSEVVPEGVTVCDVGSGAGLPGIPLALVRRDLK---ITLLEPLLRRTNFLSEVVELLGLD 117
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V R +E + V++ARA+A LD L + P L
Sbjct: 118 HVTVVRGRAEEVLGTLQPVHVVTARAVAPLDRLAGWGVPLLRP 160
>gi|116750027|ref|YP_846714.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
gi|193806434|sp|A0LLH7|RSMG1_SYNFM RecName: Full=Ribosomal RNA small subunit methyltransferase G 1;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 1; Short=16S rRNA m7G
methyltransferase 1
gi|116699091|gb|ABK18279.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
Length = 220
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+ S LRA + VS + E L L L+W+ + NL + + H+
Sbjct: 1 MRETPSPQTLRAFLNGHGIAVSPQQAEMLFEHVRLMLEWNLRSNLTRITEFDRILTAHLL 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + P +D+G+G GFPG+ I + + L+ES KK SFL+ ++
Sbjct: 61 DSLLPARWLPLTGKTLDVGTGAGFPGVPLKILHPETQ---MYLLESNRKKVSFLKVLLAG 117
Query: 121 TAARG-KVFACRIQEAP----QMITTCDVISARAL 150
+ G V R +E + + RA+
Sbjct: 118 LSLPGIHVLHGRWEEPEGWFTEEDERFTAVIMRAV 152
>gi|300314066|ref|YP_003778158.1| methyltransferase GidB [Herbaspirillum seropedicae SmR1]
gi|300076851|gb|ADJ66250.1| methyltransferase GidB (glucose inhibited division protein B)
protein [Herbaspirillum seropedicae SmR1]
Length = 139
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
L+ +S L+KL + L KW+K NL + H+ DSL
Sbjct: 13 TLKEGATAMGLTLSDAQLDKLMAYQALLAKWNKVYNLTALRDPAQMVTHHLLDSLSAVSA 72
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAA-RGK 126
+D+G+GGG PGI+ +I + + + + L+++ KK +FL V +
Sbjct: 73 FTGAQRVLDVGAGGGLPGIVLAIWAAQAQPQMKITLVDTVQKKTAFLNQVKAQLQLGNVT 132
Query: 127 VFACRIQ 133
V R++
Sbjct: 133 VVHARVE 139
>gi|68537195|ref|YP_251900.1| glucose-inhibited division protein B [Corynebacterium jeikeium
K411]
gi|82592863|sp|Q4JSC5|RSMG_CORJK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|68264794|emb|CAI38282.1| glucose-inhibited division protein B [Corynebacterium jeikeium
K411]
Length = 222
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ + L+ V W RH+ +S + ++ +D+GSG G PGI +I
Sbjct: 35 YAEFLATAGIERGLLGPREVPRIWERHILNSAVLGEVIDEGCRVVDIGSGAGLPGIPLAI 94
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARA 149
++ V L+E ++ +FL V + +V R ++ + + DV ++RA
Sbjct: 95 ARPDLK---VQLLEPLLRRYNFLAEVNSQLNLGCEVVRGRAEDPAVVEALGGADVATSRA 151
Query: 150 LADLDTLLEYSFPWLY 165
+A L L +S P +
Sbjct: 152 VAPLGKLTRWSLPLVK 167
>gi|311742157|ref|ZP_07715967.1| 16S rRNA methyltransferase GidB [Aeromicrobium marinum DSM 15272]
gi|311314650|gb|EFQ84557.1| 16S rRNA methyltransferase GidB [Aeromicrobium marinum DSM 15272]
Length = 194
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 7/144 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E E + + + ++ V W RH+ + + V P + D+GSG G
Sbjct: 7 ENWETAQAYADILATDGVARGMIGPREVPRLWDRHLWNCVVVVPRIPAGATVADVGSGAG 66
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTC 142
PG++ +I IE + L+E ++ +FL VV++ R ++ +
Sbjct: 67 LPGLVWAIARPDIE---MTLVEPLLRRTTFLTEVVERLGLSNVTVDRSRAEDVSSV---F 120
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
DV++ARA+A +D L + P + +
Sbjct: 121 DVVTARAVAPMDRLAGWCLPLVRE 144
>gi|225457144|ref|XP_002283664.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 208
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 18/138 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHP-----------YPSIWIDLGSGGGFPGIITSI 91
+NL + + ++ RHV DSL + +D+GSG G PG+I +I
Sbjct: 1 MNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCNNISLVDVGSGPGLPGLILAI 60
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQ---MITTCDVISA 147
S + + L+ES NK+ FL + V T V R + Q DV A
Sbjct: 61 ACPSWK---ITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRAENLGQNIGFREVFDVAVA 117
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A++ L EY P +
Sbjct: 118 RAVAEMRILAEYCLPLVR 135
>gi|88705407|ref|ZP_01103118.1| Glucose inhibited division protein [Congregibacter litoralis KT71]
gi|88700497|gb|EAQ97605.1| Glucose inhibited division protein [Congregibacter litoralis KT71]
Length = 211
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W+K NL + +H+ DSL V H +ID+G+G G PGI +I L
Sbjct: 33 RWNKAYNLTAIRDEAVMVTKHLLDSLAVLP-HLRGQRFIDVGTGAGLPGIPLAIALPDKH 91
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
+L++S KK FL + + + ++ R+ + D + +RA A LD +
Sbjct: 92 ---FSLLDSNGKKTRFLTHAANELSLDNVEIVKSRVADFV-PGERYDAVLSRAFASLDAM 147
Query: 157 LEYSFPWL 164
+ L
Sbjct: 148 ISGCEHLL 155
>gi|269129162|ref|YP_003302532.1| methyltransferase GidB [Thermomonospora curvata DSM 43183]
gi|268314120|gb|ACZ00495.1| methyltransferase GidB [Thermomonospora curvata DSM 43183]
Length = 210
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + L+ V+ W RH+ + V ++ P + IDLGSG G PG++
Sbjct: 10 ERYAEFLADAGVIRGLIGPREVDRLWERHLINCAVVAEMVPQGATVIDLGSGAGLPGLVL 69
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+I + V L+E ++ FL V+ +V R +E DV++AR
Sbjct: 70 AIARPDL---SVTLLEPLLRRTKFLTEAVELLELENVEVHRARAEEVAG-DYQVDVVTAR 125
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L+ ++ P L
Sbjct: 126 AVAPLDRLVGWALPLLRP 143
>gi|73543038|ref|YP_297558.1| glucose inhibited division protein [Ralstonia eutropha JMP134]
gi|123623785|sp|Q46VX0|RSMG_RALEJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|72120451|gb|AAZ62714.1| Glucose inhibited division protein [Ralstonia eutropha JMP134]
Length = 235
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 60/168 (35%), Gaps = 14/168 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A + + ++ L + L KW+ NL + ++ H+ DSL
Sbjct: 18 LEAGLAEIGLALPPDRIDTLFAYLALLRKWNGVYNLTAIRHPDEMLTHHLLDSLAAVPAL 77
Query: 70 PY-----------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+D+GSGGG PG+ +I + V +++ KK +FL
Sbjct: 78 AEMARSSEVGGAARGRVLDVGSGGGMPGLPLAISCPDV---SVLMVDIVQKKTAFLTQCR 134
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E + VI++RA A+L + S L
Sbjct: 135 AQLGLSNAAAHWGPVERLEDPDKFAVITSRAFAELTDFVNLSGHLLAP 182
>gi|121996811|ref|YP_001001598.1| methyltransferase GidB [Halorhodospira halophila SL1]
gi|189045853|sp|A1WSY4|RSMG_HALHL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121588216|gb|ABM60796.1| 16S rRNA m(7)G-527 methyltransferase [Halorhodospira halophila SL1]
Length = 209
Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + + LE+LE F L ++W++ NL ++ VE RH+ DSL V
Sbjct: 2 PRKYLESRLEDLQIELDAPALERLEGFLSLLMRWNRAYNLTAARDVETLIDRHLLDSLVV 61
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-R 124
+ P + D+GSG GFPG++ ++ V LI+S KK FLR + R
Sbjct: 62 RRYLPAGA-LADVGSGAGFPGLVLALIEPD---RSVTLIDSNGKKTRFLRQCATELGLHR 117
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+V R++ V++ARA+A L TL+
Sbjct: 118 VQVRQARMEALDD--GDFAVVTARAVAPLATLI 148
>gi|258512901|ref|YP_003186335.1| methyltransferase GidB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479627|gb|ACV59946.1| methyltransferase GidB [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 239
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF------QLHPY 71
V+ ET L + L +W++++NL + V + WI+H DS + ++
Sbjct: 12 GVPVTDETERHLRRYGELLGEWNERLNLTAIVEVREMWIKHFLDSAAIAQVPAWREIAER 71
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
ID+GSG G PGI +I L ++ K+ F+ +V+
Sbjct: 72 GGRVIDIGSGAGIPGIPLAIA---WRNVSFVLCDASRKRVQFVEHVIGDLGLTNVSAVHA 128
Query: 131 RIQEAP--QMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E + D ARA+A + LLEY+ P L
Sbjct: 129 RMEELGRTDARGSFDAAVARAVARSNVLLEYAAPMLRP 166
>gi|254282174|ref|ZP_04957142.1| methyltransferase GidB [gamma proteobacterium NOR51-B]
gi|219678377|gb|EED34726.1| methyltransferase GidB [gamma proteobacterium NOR51-B]
Length = 215
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L++ N+ + ++L + L L+W++ NL + +RH+ D+L + L
Sbjct: 9 LQSGVEEINLNLVQSQFDQLLDYVDLMLRWNRAYNLTAVREKGSMVVRHLLDALVISPLL 68
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
ID+G+G G PG+ +I L++ KK FL V +
Sbjct: 69 -QGKRLIDVGTGPGIPGVPLAIVQPERH---FTLLDGNGKKTRFLFQVKSQLGLSNIEIV 124
Query: 130 CRIQEAPQMITTCDVISARALADLDT 155
+ E + + D + RA ADL T
Sbjct: 125 EQRVENFRPHDSFDAVITRAFADLAT 150
>gi|264676174|ref|YP_003276080.1| methyltransferase GidB [Comamonas testosteroni CNB-2]
gi|262206686|gb|ACY30784.1| methyltransferase GidB [Comamonas testosteroni CNB-2]
Length = 220
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
L ++ ++ L F L KW+K NL S ++ H+ DSL
Sbjct: 9 LEQGVQALKLELAPAQIDLLMSFMDLLQKWNKVYNLTSVRDPQEMLTHHLLDSLAAVPAL 68
Query: 69 --------HPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+D+GSGGG PG++ +I I+ VN +++ KKA+F++ V
Sbjct: 69 LRHVNRLPLEEGKRLPLLDVGSGGGLPGVVFAICCPQID---VNCVDTVGKKAAFIQQVA 125
Query: 119 QKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ R++ + T VIS RA A L +S
Sbjct: 126 AALRLPNLRGIHDRVE---NLKTRYPVISCRAFASLVDFTTWS 165
>gi|221195056|ref|ZP_03568112.1| 16S rRNA methyltransferase GidB [Atopobium rimae ATCC 49626]
gi|221184959|gb|EEE17350.1| 16S rRNA methyltransferase GidB [Atopobium rimae ATCC 49626]
Length = 244
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 3 YCDSNSILRANYLLNTYNVSR--ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
Y + N + LLN Y++S E + L + L + +K +NL + ++ + H+
Sbjct: 5 YTEENEK-KLLRLLNIYDLSTTHEQRKFLLTYLELLFEKNKTLNLTRITDIDSALVLHIL 63
Query: 61 DSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + + + D+G+GGG PGI L G LI+S KK S +
Sbjct: 64 DSLLLSKFMLCSEEDSFCDIGTGGGVPGIPLGCVL----GCKGLLIDSIGKKISAVNEFA 119
Query: 119 QKTAARGKVFA--CRIQEAP-QMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + ++ A R +E +M + + ARA+A + ++EY+ P+L +
Sbjct: 120 EQLGIQDRIIAKQMRAEEIEAKMKRSFRFVVARAVAKANVVMEYAEPFLMDQ 171
>gi|114322026|ref|YP_743709.1| methyltransferase GidB [Alkalilimnicola ehrlichii MLHE-1]
gi|122310596|sp|Q0A4L8|RSMG_ALHEH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114228420|gb|ABI58219.1| 16S rRNA m(7)G-527 methyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 220
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 4/137 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ E L + L +W++ NL + + RH+ DSL + +D
Sbjct: 18 GLTLPEGAAEALITYLRLLERWNRAYNLSAIRDPGEMLHRHLLDSLSILPYV-EGDSLLD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PGI ++ + V L++S KK F R V + FA +
Sbjct: 77 VGSGAGLPGIPLALARPGL---TVTLLDSNGKKQRFTRQVALELGLHRLRFAQARLADYR 133
Query: 138 MITTCDVISARALADLD 154
D + +RA A L
Sbjct: 134 PGQPFDTVVSRAFAALS 150
>gi|325917484|ref|ZP_08179690.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas vesicatoria ATCC
35937]
gi|325536278|gb|EGD08068.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas vesicatoria ATCC
35937]
Length = 212
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-ASGTLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLALDNARVAESRAEALDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L +++ L
Sbjct: 147 ALDTLAGIIDVGGHLLRP 164
>gi|163796496|ref|ZP_02190456.1| phosphoenolpyruvate carboxykinase [alpha proteobacterium BAL199]
gi|159178346|gb|EDP62890.1| phosphoenolpyruvate carboxykinase [alpha proteobacterium BAL199]
Length = 201
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFP 85
++L + L +KW +INLV+ +++ D W RHV DS ++ + P +DLGSG GFP
Sbjct: 18 DRLAAYVALLVKWQARINLVAPASLPDVWSRHVLDSGQLARHMDGKPGPVLDLGSGAGFP 77
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G++ +I + G + L+E+ +K +FL+ + T + CRI+ + ++
Sbjct: 78 GLVLAI----LGRGDITLVEADRRKVAFLQEAARVTDTNVAIECCRIEALRPIRAG--IV 131
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ARALA + LL Y+ P++ +
Sbjct: 132 TARALASVSELLHYARPYVDK 152
>gi|113869583|ref|YP_728072.1| 16S rRNA methyltransferase GidB [Ralstonia eutropha H16]
gi|123032570|sp|Q0K5L7|RSMG_RALEH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113528359|emb|CAJ94704.1| S-Adenosylmethionine-dependent methyltransferase involved in
bacterial cell division [Ralstonia eutropha H16]
Length = 233
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 14/168 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A ++ ++ L + L KW+ NL + ++ H+ DSL
Sbjct: 11 LEAGLAQIGLALAPAQIDTLFAYLALLRKWNGVYNLTAIRHPDEMLTHHMLDSLAAVPAL 70
Query: 70 -----------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
P +D+GSGGG PG+ +I + V +++ KK +FL
Sbjct: 71 AEAARAAEVGTPARGRVLDVGSGGGMPGLPLAIACPDV---SVLMVDIVQKKTAFLTQCR 127
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E + VI++RA A+L + S L
Sbjct: 128 AQLGLSNAAAHWGPVEKLDDASGFAVITSRAFAELTDFVNLSGQLLAP 175
>gi|254384780|ref|ZP_05000117.1| methyltransferase gidB [Streptomyces sp. Mg1]
gi|194343662|gb|EDX24628.1| methyltransferase gidB [Streptomyces sp. Mg1]
Length = 245
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 8/169 (4%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKL----EYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
Y + + A L +R + + L + L+ V W RH
Sbjct: 2 YGRTVPVTEAAELPPAPEEARAVFGEFFPEAVRYAELLADAGVQRGLIGPREVPRLWERH 61
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + + ++ P D+GSG G PGI ++ ++ + L+E ++ +FL+ V
Sbjct: 62 LLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLALVRRDLK---ITLLEPLLRRTNFLQEAV 118
Query: 119 QKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V R +E + V++ARA+A LD L + P L
Sbjct: 119 ELLGLDHVTVVRGRAEEVLGKLQPVHVVTARAVAPLDRLAGWGVPLLRP 167
>gi|310825566|ref|YP_003957924.1| ribosomal RNA small subunit methyltransferase g [Stigmatella
aurantiaca DW4/3-1]
gi|309398638|gb|ADO76097.1| Ribosomal RNA small subunit methyltransferase G [Stigmatella
aurantiaca DW4/3-1]
Length = 217
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M L+ ++ L+ LKW+ K+NL + + E+ +H
Sbjct: 1 MDNARFVDQLQRGGEALGLSLGEGVAPGLQRLMAELLKWNAKVNLTAITAPEEVLEKHFL 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL V + +DLG+G GFPG+ + ++ V L+++ KK FL+ +
Sbjct: 61 DSLAVLPEVEGAASLLDLGAGAGFPGLPLKLARPAL---AVTLVDAVGKKVGFLKAAIAA 117
Query: 121 TAAR-GKVFACRIQEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQ 166
+ + R + P+ +++ ARA DL L + ++
Sbjct: 118 LGLKEARGLHLRAEGDPEREGIPRAELLIARAFMDLPDWLALAPAYVRP 166
>gi|212211702|ref|YP_002302638.1| 16S rRNA methyltransferase GidB [Coxiella burnetii CbuG_Q212]
gi|226796822|sp|B6J2B9|RSMG_COXB2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|212010112|gb|ACJ17493.1| methyltransferase [Coxiella burnetii CbuG_Q212]
Length = 204
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ V+ + + F KW++ NL + + ++ H+ DSL +
Sbjct: 5 LKQGIDQLGLKVAETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSILPYL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 65 K-GDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKITNVTII 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D I+ RAL + ++E + L
Sbjct: 121 QERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLR 156
>gi|260579556|ref|ZP_05847427.1| 16S rRNA methyltransferase GidB [Corynebacterium jeikeium ATCC
43734]
gi|258602327|gb|EEW15633.1| 16S rRNA methyltransferase GidB [Corynebacterium jeikeium ATCC
43734]
Length = 222
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ + L+ V W RH+ +S + ++ +D+GSG G PGI +I
Sbjct: 35 YAEFLATAGIERGLLGPREVPRIWERHILNSAVLGEVIDEGCRVVDIGSGAGLPGIPLAI 94
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARA 149
++ V L+E ++ +FL + + +V R ++ + + DV ++RA
Sbjct: 95 ARPDLK---VQLLEPLLRRYNFLAEMNDQLNLGCEVVRGRAEDPTVVKALGGADVATSRA 151
Query: 150 LADLDTLLEYSFPWLY 165
+A L L +S P +
Sbjct: 152 VAPLGKLTRWSLPLVK 167
>gi|239930181|ref|ZP_04687134.1| glucose-inhibited division protein B [Streptomyces ghanaensis ATCC
14672]
gi|291438523|ref|ZP_06577913.1| conserved hypothetical GidB-family protein [Streptomyces ghanaensis
ATCC 14672]
gi|291341418|gb|EFE68374.1| conserved hypothetical GidB-family protein [Streptomyces ghanaensis
ATCC 14672]
Length = 239
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + + L+ V W RH+ + + ++ P D+GSG G PGI +
Sbjct: 27 RYAELLAEAGVQRGLIGPREVPRLWERHLLNCAVLSEVVPEGVTVCDVGSGAGLPGIPLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ + L+E ++ +FL VV+ V R +E + V++ARA
Sbjct: 87 LVREDLK---ITLLEPLLRRTTFLTEVVELLGLDHVTVARGRAEEVMGKLPPVHVVTARA 143
Query: 150 LADLDTLLEYSFPWLYQ 166
+A LD L + P L
Sbjct: 144 VAPLDRLATWGIPLLRP 160
>gi|194334832|ref|YP_002016692.1| 16S rRNA methyltransferase GidB [Prosthecochloris aestuarii DSM
271]
gi|194312650|gb|ACF47045.1| methyltransferase GidB [Prosthecochloris aestuarii DSM 271]
Length = 221
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ N I++A + + +E+LE + L ++ INLVS IRHV SL
Sbjct: 8 ERNQIMQA-CTEHGLALDTRQIEQLEEYARLLESINRSINLVSRKEESSLLIRHVFHSLL 66
Query: 65 VFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V +P+ +DLG+GGG PGI +I + LI++ KK R ++
Sbjct: 67 VGFHYPFQQGEKVLDLGTGGGLPGIPLAIAYPETD---FLLIDATGKKIDACREMITTLG 123
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V A +I+ DV+ +R +A L L Y+ L +
Sbjct: 124 LKN-VHAKKIRAEELTGLMFDVVLSRQVAPLRKLCRYAEKILRPE 167
>gi|296167148|ref|ZP_06849555.1| methyltransferase GidB [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897470|gb|EFG77069.1| methyltransferase GidB [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 241
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
L+ + + + L+ VE W RH+ +S V +L ID+GSG G P
Sbjct: 33 LDLARRYAEMLAGPGVERGLLGPREVERIWDRHLLNSAAVAELLEPGDRVIDIGSGAGLP 92
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCD 143
GI ++ ++ V L+E +++ FL V++ +V R ++ D
Sbjct: 93 GIPLALARPDVD---VVLLEPLLRRSEFLSEAVEQLGLAVEVVRGRAEDPWVRDRFGERD 149
Query: 144 VISARALADLDTLLEYSFPWLY 165
+RA+A LD L ++S P L
Sbjct: 150 AAVSRAVASLDKLAKWSVPLLR 171
>gi|168063930|ref|XP_001783920.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664550|gb|EDQ51265.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 209
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 19/139 (13%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHP------------YPSIWIDLGSGGGFPGIITS 90
+NL + + RH+ DSL + + +D+GSG G PGI+ +
Sbjct: 1 MNLTAVTERGAMMDRHIADSLSLLPIIEGAHAAYCKSSAGESIKVVDIGSGAGLPGIVLA 60
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQ---MITTCDVIS 146
I + + + L+ES K+ FL + V R ++A + D+
Sbjct: 61 IARPAWQ---LTLLESLQKRCDFLERAAEAAGLTNVKVLRSRAEDAGKDSTHREMYDIAV 117
Query: 147 ARALADLDTLLEYSFPWLY 165
ARA+A++ L E P +
Sbjct: 118 ARAVAEMRILAELCLPLVR 136
>gi|120407002|ref|YP_956831.1| 16S rRNA methyltransferase GidB [Mycobacterium vanbaalenii PYR-1]
gi|189045867|sp|A1TI25|RSMG_MYCVP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119959820|gb|ABM16825.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium vanbaalenii
PYR-1]
Length = 227
Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
LEK + + + L+ VE W RH+ + V +L D+GSG G
Sbjct: 20 ALEKAHLYARILAGAGVERGLLGPREVERLWDRHILNCAVVGELLQPGERVADIGSGAGL 79
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTC 142
PGI ++ + V LIE +++ FLR +++ V R ++ + + T
Sbjct: 80 PGIPLALARPDVH---VILIEPLLRRSEFLRETIEEIGIDCDVVRGRAEDRSVREEVGTT 136
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV+ +RA+A LD L ++S P L
Sbjct: 137 DVVVSRAVASLDKLTKWSSPLLR 159
>gi|281358437|ref|ZP_06244918.1| methyltransferase GidB [Victivallis vadensis ATCC BAA-548]
gi|281315060|gb|EFA99092.1| methyltransferase GidB [Victivallis vadensis ATCC BAA-548]
Length = 221
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----WIDLGSGGGFP 85
+ Y L ++ +K +NL E+F I+HV DSL + + P + D+G G GFP
Sbjct: 25 DKLYELVIETNKTMNLTRIVEPEEFRIKHVADSLAIAREFPEFASEYLKVADIGCGAGFP 84
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR---IQEAPQMITT 141
++ ++ +++ V I+S KKA+F+ + Q R V R + +
Sbjct: 85 SLVLAMAFPNLK---VTPIDSTGKKAAFVDHTAQALGLRNVNVVNGRSCELNRRSRFKHQ 141
Query: 142 CDVISARALADLDTL 156
DV++ARA+A +
Sbjct: 142 FDVVTARAVAPAPVI 156
>gi|29655210|ref|NP_820902.1| 16S rRNA methyltransferase GidB [Coxiella burnetii RSA 493]
gi|161829865|ref|YP_001597740.1| 16S rRNA methyltransferase GidB [Coxiella burnetii RSA 331]
gi|3122151|sp|P94614|RSMG_COXBU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|189039501|sp|A9NBA9|RSMG_COXBR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1780761|emb|CAA71460.1| unnamed protein product [Coxiella burnetii]
gi|29542482|gb|AAO91416.1| methyltransferase [Coxiella burnetii RSA 493]
gi|161761732|gb|ABX77374.1| methyltransferase GidB [Coxiella burnetii RSA 331]
Length = 204
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ V+ + + F KW++ NL + + ++ H+ DSL +
Sbjct: 5 LKQGIDQLGLKVAETIQQSMLAFLAFLQKWNQAYNLTAITEIKSMITHHLLDSLSILPYL 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSG GFPGI + + LI+SK KK +FL +
Sbjct: 65 K-GDKILDVGSGAGFPGIPLAFACPEKK---FTLIDSKAKKTAFLLQAASRFKITNVTII 120
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ Q D I+ RAL + ++E + L
Sbjct: 121 QERVGSYQPGFYFDTITCRALGSVREIMEQTNHLLR 156
>gi|289666141|ref|ZP_06487722.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670765|ref|ZP_06491840.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 212
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-ASGTLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ R A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|78044839|ref|YP_358880.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
gi|123577253|sp|Q3AG54|RSMG_CARHZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|77996954|gb|ABB15853.1| glucose-inhibited division protein B [Carboxydothermus
hydrogenoformans Z-2901]
Length = 235
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 11 RANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + +S +E ++ E +Y L + ++K NL + + ++ ++H DS V
Sbjct: 4 KLKTFFAEFGLSIEKEKIQLFERYYRLLISENEKYNLTAVTGEDEVIVKHFLDSTAVLIY 63
Query: 69 HPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ +D+G+G GFPGI I + G + L++S K+ FL VV++
Sbjct: 64 RDLTDLNAVDIGTGAGFPGIPLKIMVP---GLKLLLLDSLKKRCLFLERVVRELNLTNVT 120
Query: 127 VFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
V R + DV +RA+A++ LLE+ P L
Sbjct: 121 VINERAENLGRQKPFRELFDVTFSRAVAEVRVLLEFHAPLLR 162
>gi|300115602|ref|YP_003762177.1| methyltransferase GidB [Nitrosococcus watsonii C-113]
gi|299541539|gb|ADJ29856.1| methyltransferase GidB [Nitrosococcus watsonii C-113]
Length = 214
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 4/157 (2%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL LL + + ++ L + L KW++ NL + E+ +HV DSL +
Sbjct: 8 ILEKGLLLLGVELDQSQVKLLLAYLQLLEKWNQHYNLTAIKNPEEMISKHVLDSLSIEPY 67
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+GSG G PGI ++ E L++S KK FL +
Sbjct: 68 L-EGRRILDVGSGAGLPGIPLAVAHPGCE---FVLLDSNAKKTRFLFQASVELGLSNISV 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
C E + D I RA L + +
Sbjct: 124 VCERVEVYRPSHLFDTIVTRAFTKLVDFVNQAEHLCK 160
>gi|145221427|ref|YP_001132105.1| methyltransferase GidB [Mycobacterium gilvum PYR-GCK]
gi|315446821|ref|YP_004079700.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. Spyr1]
gi|189045862|sp|A4T4S9|RSMG_MYCGI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145213913|gb|ABP43317.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium gilvum PYR-GCK]
gi|315265124|gb|ADU01866.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. Spyr1]
Length = 227
Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ V+ W RH+ + + +L D+GSG G PGI
Sbjct: 25 RRYAEILAGAGVERGLLGPREVDRIWDRHILNCAVIGELVEAGERVADVGSGAGLPGIPL 84
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
++ + V LIE +++ FLR ++ V R ++ + + DV+ +
Sbjct: 85 ALARPDVH---VVLIEPLLRRSDFLREAIEDVGIECSVVRGRAEDRSVREEVGPTDVVVS 141
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 142 RAVASLDKLAKWSSPLLRP 160
>gi|163782943|ref|ZP_02177938.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
gi|159881623|gb|EDP75132.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
Length = 202
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------ 71
+ +S+E EK + +W++ NL S E+ RH DSL + +
Sbjct: 13 GFELSQEDAEKFGLYLEELKRWNRVHNLTSVKKDEEIVRRHFIDSLSLVRCFVELGVRWQ 72
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
++ D+GSG GFPG+ I L IE + LIES +KK SFL Y+ + V R
Sbjct: 73 GKVFADVGSGAGFPGVPLKIYLKDIE---LFLIESVSKKCSFLEYLKLRLNMDWTVICER 129
Query: 132 IQEAPQMITTCDVISARA 149
+ + + D++ +RA
Sbjct: 130 AERVDR---SFDIVVSRA 144
>gi|303272167|ref|XP_003055445.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463419|gb|EEH60697.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 214
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYP-------------SIWIDLGSGGGFPGIIT 89
+NL ++TV++ RHV DSL + +D+GSG GFPG+
Sbjct: 1 MNLTGATTVDEVLSRHVADSLALIPPIEAALASSTTSSSPSHTPRILDVGSGAGFPGVAL 60
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP----QMITTCDV 144
+I E V L+++ K+ +FL ++ A R ++A + D+
Sbjct: 61 AIARPRWE---VTLLDTLQKRVAFLDAAAEECGATNVKTLWSRAEDAGKVGSEHREAYDI 117
Query: 145 ISARALADLDTLLEYSFPWLY 165
++ARA+A+L TL E P +
Sbjct: 118 VTARAVAELRTLAELCVPLVR 138
>gi|145588205|ref|YP_001154802.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189040706|sp|A4SUS4|RSMG_POLSQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145046611|gb|ABP33238.1| 16S rRNA m(7)G-527 methyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 222
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +L ++S + + LE F +W++ NL + E H+ DS+ V
Sbjct: 2 TEGLLALGIEQLGLDLSPQNVADLELFLQEMTRWNQVHNLTAIDNEEGSIRLHLIDSIAV 61
Query: 66 FQ-----LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L DLGSGGG P I +I + + LIE+ KK +FL++V K
Sbjct: 62 LPVMRRFLPQQNPKIADLGSGGGLPAIPIAIVEPNWR---LTLIEAIRKKTAFLQHVRGK 118
Query: 121 TAARG-KVFACRIQEAP-QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +V + R++ Q D + +RA +L L+ S P L
Sbjct: 119 LKLKNIEVISDRVENVALQQSGQFDAVISRAFTNLARFLDLSLPLLKP 166
>gi|77747572|ref|NP_299217.2| 16S rRNA methyltransferase GidB [Xylella fastidiosa 9a5c]
gi|23821641|sp|Q9PC50|RSMG_XYLFA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + +
Sbjct: 14 LEYGLDILELDRVYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTV 73
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ +
Sbjct: 74 G-RLADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEV 129
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA T + ++ARAL L+ ++ L +
Sbjct: 130 RAEALDEALTYEHLTARALDTLNGIVTVGGHLLKSE 165
>gi|291297417|ref|YP_003508815.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
gi|290472376|gb|ADD29795.1| methyltransferase GidB [Meiothermus ruber DSM 1279]
Length = 242
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M +L+A L ++ R L + F+ L ++ +NL + E +H
Sbjct: 3 MTAAGKQMLLQAGAEL-GLDL-RPYLPQFALFFELLTTVNQNLNLTAIRDEEGIIYKHFA 60
Query: 61 DSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL + + S ID+G+G GFPG+ +I S I+ +L+++ KK F+ V
Sbjct: 61 DSLSCLRYAGFASGLSVIDVGTGAGFPGLPLAIVRSDIQ---FDLLDATKKKIEFVAKVA 117
Query: 119 QKTAA-RGKVFACRIQEAPQM---ITTCDVISARALADLDTLLEYSFPWL 164
Q A + R +E + T RA+A L T E + P +
Sbjct: 118 QTLALVNTQALWGRSEELGRQVVKRETYGAALTRAVASLATAAELTLPLV 167
>gi|28198767|ref|NP_779081.1| glucose-inhibited division protein B [Xylella fastidiosa Temecula1]
gi|182681460|ref|YP_001829620.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa M23]
gi|32129539|sp|Q87D24|RSMG_XYLFT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238691037|sp|B2I4Q1|RSMG_XYLF2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|28056858|gb|AAO28730.1| glucose inhibited division protein [Xylella fastidiosa Temecula1]
gi|182631570|gb|ACB92346.1| methyltransferase GidB [Xylella fastidiosa M23]
gi|307579911|gb|ADN63880.1| 16S rRNA methyltransferase GidB [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 212
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
Y L+ + R + L + L ++W++ NL + + +RH+ DSL + +
Sbjct: 14 LEYGLDILELDRAYVVPLLAYLTLLIRWNRTYNLTAIRDPREMVVRHLLDSLAIQRYVTV 73
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
DLGSG G PGI +I S++ V L+ES KKA FLR VV++ +
Sbjct: 74 G-RLADLGSGPGLPGIPLAISCPSLQ---VTLVESNGKKARFLREVVRQLGLSNVGVSEV 129
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
EA + ++ARAL L+ ++ L +
Sbjct: 130 RAEALDEALMYEHLTARALDTLNGIVTVGGHLLKSE 165
>gi|258544325|ref|ZP_05704559.1| glucose-inhibited division protein B [Cardiobacterium hominis ATCC
15826]
gi|258520405|gb|EEV89264.1| glucose-inhibited division protein B [Cardiobacterium hominis ATCC
15826]
Length = 209
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
L + V + + L KW++ NL + VE+ RHV D L V
Sbjct: 7 QEKLERGLDALPFAVDAAQRAQFARYLDLLNKWNQVHNLTAVRDVEEQVSRHVLDCLAVL 66
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RG 125
+ D+GSG G P ++ +I S + V +ES KKA+F+R V+ A
Sbjct: 67 PYIEDAATLADIGSGAGLPALMLAIMRSQL---AVTALESNGKKAAFIREAVRVLALANV 123
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+V A R+++ VI +RALA D + +
Sbjct: 124 QVVAQRVEDWQAPPQA--VIISRALAAADRFIALTAHL 159
>gi|58428773|gb|AAW77810.1| glucose inhibited division protein B [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 276
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + RH+ DSL + + DLG+G G PGI
Sbjct: 95 LLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYI-ASGMLADLGTGPGLPGIP 153
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ R A EA T D ++AR
Sbjct: 154 LAITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPTAYDHLTAR 210
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 211 ALDTLAGIIAVGGHLLRP 228
>gi|313683293|ref|YP_004061031.1| 16S rRNA m(7)g-527 methyltransferase [Sulfuricurvum kujiense DSM
16994]
gi|313156153|gb|ADR34831.1| 16S rRNA m(7)G-527 methyltransferase [Sulfuricurvum kujiense DSM
16994]
Length = 192
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 12 ANYLLNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LL YNVS + EK+E + L KW+K NL + T++ + D++
Sbjct: 4 LKQLLAQYNVSVNEDFFEKIEQYKTLLEKWNKIHNLTGAKTLQQI-DAFIVDAVIPITFL 62
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
P +D+G+G GFPG+I +I + L+E +K+ASFL++V V
Sbjct: 63 PSVKKAMDIGTGAGFPGMILAIAMPQTH---FTLVEPLSKRASFLQFVKADLGLENVDVK 119
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A R ++ D+I++RA+ D + LL+ S P+ +
Sbjct: 120 ALRAEQLKS--EPYDLITSRAVTDTEMLLKLSEPFCRE 155
>gi|21110592|gb|AAM39000.1| glucose inhibited division protein B [Xanthomonas axonopodis pv.
citri str. 306]
Length = 260
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + DLG+G G PGI
Sbjct: 79 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-ASGALADLGTGPGLPGIP 137
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A EA D ++AR
Sbjct: 138 LAITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTAR 194
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 195 ALDTLAGIIAVGGHLLRP 212
>gi|255261433|ref|ZP_05340775.1| 16S rRNA methyltransferase GidB [Thalassiobium sp. R2A62]
gi|255103768|gb|EET46442.1| 16S rRNA methyltransferase GidB [Thalassiobium sp. R2A62]
Length = 203
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 59/144 (40%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
NVSRET+++L+ + L LKW+ IN+V+ ST+ D W+RH+EDS ++ P I W+DL
Sbjct: 7 NVSRETIDRLKAYESLILKWNPVINVVAKSTLTDIWVRHIEDSAQIVDFAPDGIIHWVDL 66
Query: 79 GSGGGFPGIITSIQLSSIEGGLV-NLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAP 136
GSGGG PG++ ++ L+ V LIES +KA+FLR + + V + RI+
Sbjct: 67 GSGGGLPGVVAALILAERSPDAVITLIESDKRKAAFLRTAALELGCSSISVVSDRIESVK 126
Query: 137 QMITTCDVISARALADLDTLLEYS 160
+ ++SARALA LD LL ++
Sbjct: 127 PQRAS--ILSARALAKLDVLLSFA 148
>gi|269797063|ref|YP_003316518.1| glucose-inhibited division protein B [Sanguibacter keddieii DSM
10542]
gi|269099248|gb|ACZ23684.1| glucose-inhibited division protein B [Sanguibacter keddieii DSM
10542]
Length = 210
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +E F + L+ + W RH+ +S V Q P +D+GSG G
Sbjct: 16 EAFPAVERFAHELTVQGELRGLIGPRELGRIWDRHILNSAAVVQYLPEQGTVVDIGSGAG 75
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG++ + E V L+E ++ +L + +V R +E
Sbjct: 76 LPGLVIAAMRPQAE---VILVEPMERRCVWLAEMTDAMGLTNVEVKRGRAEEFHDAFE-A 131
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A LD L +S P L
Sbjct: 132 DVVTSRAVAALDKLARWSLPLLRP 155
>gi|328675262|gb|AEB27937.1| Ribosomal RNA small subunit methyltransferase G [Francisella cf.
novicida 3523]
Length = 202
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
++ + + + + + L KW+K N+ + ++D ++H+ DSL V
Sbjct: 1 MKDKIKQALSQLSIQATDIQITQWLDYLKLLEKWNKVYNMTAIKKLDDMLVKHLFDSLAV 60
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAAR 124
+ S +D+G+GGG PG++ +I + LI+S KK FL+ V +
Sbjct: 61 AKYIKGSST-VDVGTGGGLPGVVLAILYPQHQ---FTLIDSVGKKIMFLKNVKKSLNLNN 116
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ D I +RA + +DT E L +
Sbjct: 117 INPLNMRIE---NFDGNFDNIISRAFSSVDTFYELCKQLLTE 155
>gi|220919590|ref|YP_002494894.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-1]
gi|254766874|sp|B8JDK2|RSMG_ANAD2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219957444|gb|ACL67828.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-1]
Length = 215
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 5/162 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L + V LE + L W++K+NL + + + +H+ DSL +
Sbjct: 6 HEALASGIEALGLPVDEAARALLERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLL 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSG G PGI + + V + KK +F++ V + +
Sbjct: 66 PFLTGAGTLLDVGSGAGLPGIPLACARRDL---SVTCCDGVAKKIAFVKAVSAELDLPVR 122
Query: 127 VFACRIQEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQ 166
A R + P+ D + +RALA+ D + +L +
Sbjct: 123 GVAVRAEGEPEREGLPRADAVVSRALAEPDRWVPVGARYLAE 164
>gi|227506192|ref|ZP_03936241.1| glucose-inhibited division protein B [Corynebacterium striatum ATCC
6940]
gi|227197216|gb|EEI77264.1| glucose-inhibited division protein B [Corynebacterium striatum ATCC
6940]
Length = 169
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
V W RH+ + + ++ P + ID+GSG G PGI +I ++ + LIE
Sbjct: 2 GPREVPRLWDRHILNCAVIGEVMPEGARVIDVGSGAGLPGIPLAIARPDLD---ITLIEP 58
Query: 107 KNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVISARALADLDTLLEYSFPW 163
K++++L V + V R +E P + + D++++RA+A L L ++S P
Sbjct: 59 LLKRSNYLLEVKEMLGLDNVTVIRGRAEEGPVKKAVKGADIVTSRAVAPLGKLAKWSLPL 118
Query: 164 LY 165
+
Sbjct: 119 VK 120
>gi|227549432|ref|ZP_03979481.1| glucose-inhibited division protein B [Corynebacterium
lipophiloflavum DSM 44291]
gi|227078509|gb|EEI16472.1| glucose-inhibited division protein B [Corynebacterium
lipophiloflavum DSM 44291]
Length = 222
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
N V + L + ++ + + VE W RH+ + + +
Sbjct: 23 NASAVFSDRLSLAQAYHESLATVAASRGFIGPKEVERLWSRHLLNCAVISEAFDEGLEVA 82
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG G PGI +I + V LIE K++++L VV + V R +E
Sbjct: 83 DIGSGAGLPGIPLAIARPDL---SVTLIEPLLKRSTYLSEVVDELGLENVTVVRGRAEE- 138
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q DV+++RA+A L L +S P +
Sbjct: 139 -QSSALFDVVTSRAVAPLGKLAGWSLPLVKP 168
>gi|304413042|ref|ZP_07394515.1| glucose-inhibited cell-division protein B [Candidatus Regiella
insecticola LSR1]
gi|304283885|gb|EFL92278.1| glucose-inhibited cell-division protein B [Candidatus Regiella
insecticola LSR1]
Length = 189
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 25/160 (15%)
Query: 11 RANYLLNT--YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ YLL T +S + ++L ++ L KW+K NL S + IRH+ DS+ V
Sbjct: 4 KLEYLLATAKITLSDKQKQQLIHYVLLLDKWNKTYNLTSVRDPQQILIRHIMDSIVVKPY 63
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ID+G+G G PGI +I I L++S K+ F G
Sbjct: 64 LKGEQ-FIDVGTGAGLPGIPLAIVCPDIH---FTLLDSLGKRVRFXXXXXXXXXXHG--- 116
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ +RA A + +L + + K
Sbjct: 117 ----------------VISRAFASITDMLSCCHHLVDKNK 140
>gi|303256378|ref|ZP_07342392.1| 16S rRNA methyltransferase GidB [Burkholderiales bacterium 1_1_47]
gi|331001496|ref|ZP_08325114.1| 16S rRNA methyltransferase GidB [Parasutterella excrementihominis
YIT 11859]
gi|302859869|gb|EFL82946.1| 16S rRNA methyltransferase GidB [Burkholderiales bacterium 1_1_47]
gi|329568225|gb|EGG50042.1| 16S rRNA methyltransferase GidB [Parasutterella excrementihominis
YIT 11859]
Length = 214
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 10/168 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ L E + KL F L LKW+K NL + D +H+ DSL
Sbjct: 3 KNREELIQGLERLGITAGEEEVSKLISFSELLLKWNKVYNLTAIRDEGDVIRKHLLDSLT 62
Query: 65 VFQLHPY-----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ +D+G GGG P I SI L + NLI++ NKK +F+R V
Sbjct: 63 LLPYFKLYGSEVGCRTLDVGCGGGLPAIPLSIFLKDFD---FNLIDTVNKKITFVRQAVI 119
Query: 120 KTAARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ F R++ + ++IS RA + L + + + + +
Sbjct: 120 QLKLPNVNAFNERVENFHPLK-PFNLISCRAFSSLASFVTLTEHLIDE 166
>gi|296533442|ref|ZP_06896025.1| 16S rRNA methyltransferase GidB [Roseomonas cervicalis ATCC 49957]
gi|296266222|gb|EFH12264.1| 16S rRNA methyltransferase GidB [Roseomonas cervicalis ATCC 49957]
Length = 206
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLG 79
VSRET +LE F L L+W+ +INLV+SS RH+ DSL++ L P DLG
Sbjct: 14 VSRETEARLEAFLALLLRWNARINLVASSDPAVLRQRHIADSLQLLPLLPEGEGPMADLG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
SGGGFPG++ + + V+L+ES +K++FL+ + KV A RI+
Sbjct: 74 SGGGFPGLVLASAV----TRPVHLVESDRRKSAFLQAAAAELGLSHVKVHAERIEAVS-- 127
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V++ARALA L+ +L ++ L +
Sbjct: 128 LPPIAVLTARALAPLEKMLPWAERLLAPE 156
>gi|261856910|ref|YP_003264193.1| methyltransferase GidB [Halothiobacillus neapolitanus c2]
gi|261837379|gb|ACX97146.1| methyltransferase GidB [Halothiobacillus neapolitanus c2]
Length = 217
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M+Y + + +++ + +++ + L KW++ NL + +ED +RHV
Sbjct: 8 MRYAEH---IEQGVQAMGQDIALRSAQRISAYIHLLAKWNRTYNLTAVRNLEDMRVRHVL 64
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+L V +D+GSG G PGI+ ++ E V LI+S K F V++
Sbjct: 65 DALAVRPWIRSAGHLVDVGSGPGIPGILLALA---DESLAVTLIDSNLKMTRFAEAAVRE 121
Query: 121 TAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A V R++E P ++ D +RA A L + +
Sbjct: 122 LAIENVTVLRSRVEEVPA--SSFDQAISRAFASTADFLRLTCHLVRP 166
>gi|237786650|ref|YP_002907355.1| glucose-inhibited division protein B [Corynebacterium
kroppenstedtii DSM 44385]
gi|237759562|gb|ACR18812.1| glucose-inhibited division protein B [Corynebacterium
kroppenstedtii DSM 44385]
Length = 253
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
++ + L+ W RH+ + + +L S +D+GSG G PGI +
Sbjct: 65 AYHESLRSDATVRGLIGPREAPRLWERHILNCAVIGELMDRDSRVVDIGSGAGLPGIPLA 124
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE--APQMITTCDVISA 147
I ++ + LIE + ++ ++L +V K V R +E + D +++
Sbjct: 125 IARPDLD---ITLIEPQLRRVNYLEEIVGKLGLDNVSVVRGRAEEKTIKRQNRGADYVTS 181
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L L+ +S P Q
Sbjct: 182 RAVAPLGKLMGWSLPLTRQ 200
>gi|189501182|ref|YP_001960652.1| 16S rRNA methyltransferase GidB [Chlorobium phaeobacteroides BS1]
gi|189496623|gb|ACE05171.1| methyltransferase GidB [Chlorobium phaeobacteroides BS1]
Length = 219
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+I+ + L +L + L ++ NLVS +RH+ SL +
Sbjct: 8 TIIEKTCSDEGLKLDERQLGQLIKYAELLESANRITNLVSRKEQAPLLMRHIFHSLLIGL 67
Query: 68 LHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
HP+ +D+G+GGG PGI +I LI++ KK S ++ +
Sbjct: 68 FHPFEPDEKVLDIGTGGGLPGIPLAIAFPDTR---FLLIDATGKKISACNGMIASLGLKN 124
Query: 126 KV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ R +E + + D + +R +A L L Y+ L +
Sbjct: 125 VIAKKTRAEELKGV--SFDTVLSRQVAPLRRLCAYTERLLVPE 165
>gi|254424200|ref|ZP_05037918.1| methyltransferase GidB [Synechococcus sp. PCC 7335]
gi|196191689|gb|EDX86653.1| methyltransferase GidB [Synechococcus sp. PCC 7335]
Length = 270
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 34/181 (18%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF----------- 66
+ + + + + Y L+ ++++NL + + FW +H+ DSL
Sbjct: 17 NWRPTSKQQQLFQDLYIQILEGNRQLNLTRITEPQAFWEKHLWDSLSGLAPWLSDIAEAS 76
Query: 67 ------------QLHPY-------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ PY P ID+G+GGGFPGI +I L+S+ + L+++
Sbjct: 77 KADTEAKTEVGAETIPYFANDDSAPLRMIDIGTGGGFPGIPAAIALTSL-AIDLTLVDAT 135
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWL 164
KK FL+ + Q+ A R + P+ T D+ RA+ T EY P+L
Sbjct: 136 RKKILFLQTLCQQLGLNTTCIADRAEALGRDPEHRETYDLALIRAVGSAATCAEYVMPFL 195
Query: 165 Y 165
Sbjct: 196 K 196
>gi|188993632|ref|YP_001905642.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. B100]
gi|167735392|emb|CAP53606.1| Methyltransferase GidB [Xanthomonas campestris pv. campestris]
Length = 314
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++ + L + L ++W+K NL + + RH+ DSL +
Sbjct: 120 LQAQSLDADFAAPLLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-VSGTL 178
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLG+G G PGI +I ++ V L+ES KKA F+R ++ A A EA
Sbjct: 179 ADLGTGPGLPGIPLAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEA 235
Query: 136 PQMITTCDVISARALADLDTLL 157
D ++ARA LDTL
Sbjct: 236 VDEPAAYDHLTARA---LDTLA 254
>gi|113955529|ref|YP_731543.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CC9311]
gi|123327618|sp|Q0I7M9|RSMG_SYNS3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|113882880|gb|ABI47838.1| methyltransferase GidB [Synechococcus sp. CC9311]
Length = 254
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPS 73
+ + L +L+ L W+ ++NL E+FWI V DSL +
Sbjct: 19 GWQPNENQLSQLKELQALLRHWNSRVNLTRLVENEEFWIAQVFDSLWPLEKELRTPDLTR 78
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACR 131
ID+G+GGGFPG+ +I L G + L++S +K + + + R V R
Sbjct: 79 RCIDVGTGGGFPGLAVAIALP---GTSLTLVDSVGRKTAAVESMANALGLGTRVDVRTER 135
Query: 132 IQEAPQM---ITTCDVISARALADLDTLLEYSFPWLYQK 167
++ Q T D+ ARA+A + EY P L +
Sbjct: 136 VEVTGQKRSCRGTFDLAMARAVATPPVVAEYLVPLLAHQ 174
>gi|152968447|ref|YP_001364231.1| methyltransferase GidB [Kineococcus radiotolerans SRS30216]
gi|189045856|sp|A6WGM8|RSMG_KINRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151362964|gb|ABS05967.1| methyltransferase GidB [Kineococcus radiotolerans SRS30216]
Length = 254
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++ + L + L+ V W RH+ + + ++ S IDLGSG G PG
Sbjct: 38 DRAATYRELLATAGVERGLIGPREVPRLWDRHLLNCAYLGEVIDQGSSVIDLGSGAGLPG 97
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC--DV 144
I ++ ++ + L+E ++ +FLR + + R +V R A + V
Sbjct: 98 IPLALARPDLQ---IRLVEPLERRYTFLREAITELGLRDQVAVAR-GRAEDVRGEFSASV 153
Query: 145 ISARALADLDTLLEYSFPWL 164
++ARA+A L TL ++ P +
Sbjct: 154 VTARAVAPLKTLYGWALPLV 173
>gi|120556789|ref|YP_961140.1| methyltransferase GidB [Marinobacter aquaeolei VT8]
gi|166224597|sp|A1U7I4|RSMG_MARAV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|120326638|gb|ABM20953.1| 16S rRNA m(7)G-527 methyltransferase [Marinobacter aquaeolei VT8]
Length = 214
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 6/161 (3%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y LR ++S ++L F L KW+K NL + R +
Sbjct: 1 MSYPQWPGQLRDGLAAMNLSLSDSQQQQLLAFLALLNKWNKAYNLTAVRDERVMVSRQLL 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + +D+G+GGG PGI +I + L++S KK FL V +
Sbjct: 61 DSLSILPWV-TTDHLLDVGAGGGLPGIPLAIVVPEKR---FTLLDSNGKKTRFLNQCVLE 116
Query: 121 TAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+V R ++ Q IS+RA L+ L+ +
Sbjct: 117 LGLDNVEVIHGRAEDC-QPDQPFTQISSRAFTALENLVTWC 156
>gi|78049820|ref|YP_365995.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325927975|ref|ZP_08189196.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|325928705|ref|ZP_08189877.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|123583814|sp|Q3BML8|RSMG_XANC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78038250|emb|CAJ25995.1| methyltransferase GidB [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325540937|gb|EGD12507.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
gi|325541660|gb|EGD13181.1| 16S rRNA m(7)G-527 methyltransferase family [Xanthomonas perforans
91-118]
Length = 212
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-ASGTLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|330752161|emb|CBL87121.1| glucose-inhibited division protein B [uncultured Flavobacteria
bacterium]
Length = 207
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDL 78
++ + ++K+ L+ W+ +IN++S S ++ W H+ SL + L P +DL
Sbjct: 17 LTADAVDKINSLPSLYGFWNNQINVISRSDQDEIWKHHIIHSLVLGNLIPISKGLRVLDL 76
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQ 137
G+GGGFPGI +I IE L++S KK + +V++ R +
Sbjct: 77 GTGGGFPGIPLAIAFPEIE---FILVDSIGKKIKVVNAIVKELRLENVSAIHSRAE---S 130
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQKK 168
+ + D+I RA+A ++ L+ + KK
Sbjct: 131 LDDSFDIIITRAVASIEKLVSLTKNLFTDKK 161
>gi|189501888|ref|YP_001957605.1| 16S rRNA methyltransferase GidB [Candidatus Amoebophilus asiaticus
5a2]
gi|189497329|gb|ACE05876.1| hypothetical protein Aasi_0466 [Candidatus Amoebophilus asiaticus
5a2]
Length = 216
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+C S I+ + N++ + ++ ++ +W+ +NL+S + + ++RHV +
Sbjct: 7 FCPSVEII----FEHFDNLTSQQKDQFRQLGTIYQEWNACLNLISRKDLPNLYLRHVLHA 62
Query: 63 LRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + +L + + +D+G+GGGFPG+ +I + +L++S NKK ++ +VQ
Sbjct: 63 LSIAKLVQFKPATKILDVGTGGGFPGVPLAILFPQVH---FHLVDSINKKVHAVQAIVQA 119
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
A A + + I RA+ +L+T +
Sbjct: 120 LALDNVTIQT--ARAENLTNQYEFILGRAVTNLETFCGW 156
>gi|300859523|ref|YP_003784506.1| glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis FRC41]
gi|300686977|gb|ADK29899.1| glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis FRC41]
gi|302207206|gb|ADL11548.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis C231]
gi|302331767|gb|ADL21961.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis 1002]
gi|308277459|gb|ADO27358.1| Glucose-inhibited division protein B [Corynebacterium
pseudotuberculosis I19]
Length = 223
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 10/172 (5%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRET----LEKLEYFYFLFLKWSKKINLVSSSTVEDFWI 56
MK+ ++N L ++ E L+K ++ L + + W
Sbjct: 1 MKHEENNGTEHGLELTPPPEIAAEIFGSLLDKAVEYHRLLATDGSTRGFIGPREIPKLWD 60
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH+ + + + + D+GSG G PGI ++ +E + LIE K++ FL
Sbjct: 61 RHILNCAVIGEAMDSNARVADIGSGAGLPGIPLALARPDLE---ITLIEPLLKRSVFLGE 117
Query: 117 VVQKTAARGKVF-ACRIQE--APQMITTCDVISARALADLDTLLEYSFPWLY 165
V R +E + DV+++RA+A L L +S P +
Sbjct: 118 VKDSLGLDNVTIMRGRAEEKVIRNELGLVDVVTSRAVAPLGKLAGWSLPLVR 169
>gi|189347674|ref|YP_001944203.1| 16S rRNA methyltransferase GidB [Chlorobium limicola DSM 245]
gi|238692197|sp|B3EGW1|RSMG_CHLL2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189341821|gb|ACD91224.1| methyltransferase GidB [Chlorobium limicola DSM 245]
Length = 220
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
++ + L ++ E L + L +W+KKINL+S I+HV
Sbjct: 3 RHTEELDALYELCSREKMELTESQYELLAAYALLLEQWNKKINLISRKEDAPVVIKHVFH 62
Query: 62 SLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + HP+ +DLG+GGG PGI +I L++S KK + + +++
Sbjct: 63 SLLMGLFHPFSAGEKVLDLGTGGGLPGIPLAIAWPETR---FLLVDSTGKKIAACQAMIK 119
Query: 120 KTAARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V R++E + T D + +R +A L+ L Y++ +L +
Sbjct: 120 ELGISNAVALHSRVEELKGL--TFDTVLSRQVAQLEQLCAYTYRFLKPE 166
>gi|221633259|ref|YP_002522484.1| methyltransferase GidB [Thermomicrobium roseum DSM 5159]
gi|221156899|gb|ACM06026.1| methyltransferase GidB [Thermomicrobium roseum DSM 5159]
Length = 254
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIW 75
+ E + + L L+W+++INL R + +SL + P
Sbjct: 23 TPERERAFQQYGQLLLQWNRQINLTGLDEWSAIQRRLLVESLALLPWVDRACERKTPCRM 82
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQ- 133
ID+G+G G PGI ++ S+ ++ L+++ KK FL VVQ+ V R +
Sbjct: 83 IDVGTGAGIPGIPIAVVRPSL---MITLLDATKKKIRFLETVVQQLRLANVVPIHERAEV 139
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P + +ARALA L T E + P+L
Sbjct: 140 LAHQPAHRGRYHLATARALAHLATACELTLPFLAP 174
>gi|121608051|ref|YP_995858.1| 16S rRNA methyltransferase GidB [Verminephrobacter eiseniae EF01-2]
gi|189040730|sp|A1WGT3|RSMG_VEREI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|121552691|gb|ABM56840.1| methyltransferase GidB [Verminephrobacter eiseniae EF01-2]
Length = 239
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 31/180 (17%)
Query: 7 NSILRA----NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
N +LRA + + +++L F L KW++ NL + ++ +H+ DS
Sbjct: 7 NDVLRARLQSGAEVLAPGLDAAQIDRLMDFLALLQKWNRVYNLTALQDPQEMLTQHLLDS 66
Query: 63 LRVFQLH----------------------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L P +D+GSG G PG++ +I ++
Sbjct: 67 LAALAPLRRQLAHLAHLAHSTGLAGPGQGAGPRRLLDVGSGAGLPGVVFAICCPQLD--- 123
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
V+ ++S KKA+F+ V + R + T ++I RA A L + ++
Sbjct: 124 VHCVDSVGKKAAFIGQVALQLRLRN--LHGVHARVETLTTPFEIICCRAFAALPDFVRWT 181
>gi|313902792|ref|ZP_07836189.1| methyltransferase GidB [Thermaerobacter subterraneus DSM 13965]
gi|313466912|gb|EFR62429.1| methyltransferase GidB [Thermaerobacter subterraneus DSM 13965]
Length = 246
Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PYPSI 74
+S + L + + L + + + NL + + +RH DSL + + +
Sbjct: 18 GVRLSGDALVAMWRHWQLVREATGRFNLTAVREDAEALVRHYVDSLVLLGIAGPWAAEGL 77
Query: 75 WIDLGSGGGFPGIITSIQL-SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--R 131
+DLGSG GFPGI + L G L+ES+ KKA+FLR V G+V R
Sbjct: 78 LVDLGSGAGFPGIPLLVALGPGWRG---LLLESQGKKAAFLREAVTVLGLDGRVIVEPVR 134
Query: 132 IQEAPQM---ITTCDVISARALADLDTLLEYSFPWLY 165
+EA + D++ ARA+A L+ L EY P L
Sbjct: 135 AEEAGRRDSWREQADLVVARAVAPLNVLAEYGLPLLR 171
>gi|294626435|ref|ZP_06705035.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666222|ref|ZP_06731475.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599234|gb|EFF43371.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603995|gb|EFF47393.1| glucose-inhibited division protein B [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 212
Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-ASGTLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|296271538|ref|YP_003654170.1| methyltransferase GidB [Thermobispora bispora DSM 43833]
gi|296094325|gb|ADG90277.1| methyltransferase GidB [Thermobispora bispora DSM 43833]
Length = 226
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E +++ + L + L+ V W RH+ + V + P + +D+GSG G
Sbjct: 21 EAMDRARVYAELLAGPGVERGLLGPREVPRIWDRHMLNCGVVAEEVPENTTLVDIGSGAG 80
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG++ +I + V L+E ++ FL + + +V R +E
Sbjct: 81 LPGVVLAIIRPDVR---VTLLEPLLRRTVFLSEITEILKLDNVEVLRGRAEELA-YKRVF 136
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
DV +ARA+A LD L+ +S P L +
Sbjct: 137 DVATARAVAPLDRLVAWSLPLLRE 160
>gi|255037112|ref|YP_003087733.1| methyltransferase GidB [Dyadobacter fermentans DSM 18053]
gi|254949868|gb|ACT94568.1| methyltransferase GidB [Dyadobacter fermentans DSM 18053]
Length = 206
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+++ + +K L+ W+ ++N++S ++ + RHV SL + ++ + + +D
Sbjct: 10 DLTADQRDKFGQMGELYEYWNARVNVISRQDIDTLYERHVLHSLGIAKVQQFRPGTAILD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--A 135
+G+GGGFPG+ +I + +L++S KK ++ +V R ++ A
Sbjct: 70 VGTGGGFPGVPLAIMFPEAQ---FHLVDSIGKKIRVVQEIVNALKLDNV----RAEQVRA 122
Query: 136 PQMITTCDVISARALADLDTLLEY 159
++ + + + +RA+ + + +
Sbjct: 123 EKLDDSYEFVVSRAVTRMAPFVGW 146
>gi|238061907|ref|ZP_04606616.1| small subunit ribosomal RNA methyltransferase G [Micromonospora sp.
ATCC 39149]
gi|237883718|gb|EEP72546.1| small subunit ribosomal RNA methyltransferase G [Micromonospora sp.
ATCC 39149]
Length = 233
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ W RH+ + V + P + +D+GSG G PG++ +I + V L+
Sbjct: 32 LIGPREAPRIWDRHLLNCAAVAERIPPDASVLDVGSGAGLPGLVLAIARPDL---TVTLV 88
Query: 105 ESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT-----TCDVISARALADLDTLL 157
E ++ SFL VV+ +VF R +EA T + D+++ARA+A LD L
Sbjct: 89 EPLARRTSFLIEVVEDLGLAKSVRVFRGRAEEAATGSTGVGPFSADIVTARAVAPLDRLA 148
Query: 158 EYSFPW 163
+ P
Sbjct: 149 AWCLPL 154
>gi|218291086|ref|ZP_03495109.1| methyltransferase GidB [Alicyclobacillus acidocaldarius LAA1]
gi|218238971|gb|EED06178.1| methyltransferase GidB [Alicyclobacillus acidocaldarius LAA1]
Length = 240
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF------QLHPY 71
V+ E +L + L +W++++NL + + WI+H DS + ++
Sbjct: 12 GVPVTGEAERELRRYGELLAEWNERLNLTAIVEAREMWIKHFLDSAAIAQVPAWREIAER 71
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
ID+GSG G PGI +I L ++ K+ F+ +V+ +
Sbjct: 72 GGRVIDIGSGAGIPGIPLAIL---WRNVSFVLCDASRKRVQFVEHVIGDLGLANVRAVHA 128
Query: 131 RIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R++E P + D ARA+A + LLEY+ P L
Sbjct: 129 RMEEFGRQPGARGSFDAAVARAVARSNVLLEYAAPMLRP 167
>gi|38234911|ref|NP_940678.1| glucose-inhibited division protein B [Corynebacterium diphtheriae
NCTC 13129]
gi|55976428|sp|Q6NE98|RSMG_CORDI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|38201176|emb|CAE50900.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 223
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++K ++ L + V W RH+ + + + D+GSG G P
Sbjct: 30 VDKAYAYHELLATDGSTRGFIGPREVPKLWSRHLLNCAVIGEAMDENIRVADIGSGAGLP 89
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMITTC 142
GI +I + + LIE K++ FL V +K V R +E + +
Sbjct: 90 GIPLAIARPDL---TITLIEPLLKRSVFLGEVKEKLELDNVTVIRGRAEEKAVREQLGLV 146
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV ++RA+A L L +S P +
Sbjct: 147 DVATSRAVAPLGKLAGWSLPLVR 169
>gi|189040870|sp|Q0SAH7|RSMG_RHOSR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 227
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + E +Y + L+ V W RH+ + V +L +D+GSG G
Sbjct: 26 ERFDIAERYYKSLASDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAG 85
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI +I + + L+E +++ +L V+ V R +E+ +
Sbjct: 86 LPGIPLAIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGG 142
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L+ L ++S P +++
Sbjct: 143 ADVVTSRAVAPLEKLAKWSLPLIHE 167
>gi|322379936|ref|ZP_08054213.1| glucose-inhibited division protein B [Helicobacter suis HS5]
gi|321147634|gb|EFX42257.1| glucose-inhibited division protein B [Helicobacter suis HS5]
Length = 179
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ F L L+W+ NL + ++ED H+ DS++V + +D+GSG GFP +
Sbjct: 5 LQRFATLLLEWNCIHNLSGAKSLEDI-EAHINDSIQVLDFIKHFDTCLDIGSGAGFPALP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-PQMITTCDVIS 146
S+ L+E KK++FL +V A ++ RIQ P I D+I+
Sbjct: 64 LSVFCPHAR---FILVEPNIKKSAFLYHVKNTLALDNLQIKRARIQTLNPLEIEKMDLIT 120
Query: 147 ARALADLDTLLEYSFPWLY 165
+RAL LL P+L
Sbjct: 121 SRALMPTQDLLALGMPFLK 139
>gi|229491187|ref|ZP_04385015.1| 16S rRNA methyltransferase GidB [Rhodococcus erythropolis SK121]
gi|229321925|gb|EEN87718.1| 16S rRNA methyltransferase GidB [Rhodococcus erythropolis SK121]
Length = 223
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E +Y + L+ V W RH+ + + +L +D+GSG G PGI
Sbjct: 29 ERYYQSLATDGVERGLIGPREVPRLWERHLLNCAVIGELIAEGESVVDVGSGAGLPGIPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I ++ V L+E +++ +L ++ V R +E+ + DV+++
Sbjct: 89 AIARPDLK---VTLVEPLLRRSVYLAEFIESNGLDVLVVRGRAEESGVVKEAGGADVVTS 145
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L+ L +S P +++
Sbjct: 146 RAVAPLEKLARWSLPLIHE 164
>gi|226309511|ref|YP_002769473.1| methyltransferase GidB [Rhodococcus erythropolis PR4]
gi|226188630|dbj|BAH36734.1| methyltransferase GidB [Rhodococcus erythropolis PR4]
Length = 226
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E +Y + L+ V W RH+ + + +L +D+GSG G PGI
Sbjct: 32 ERYYQSLATDGVERGLIGPREVPRLWERHLLNCAVIGELIAEGESVVDVGSGAGLPGIPL 91
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I ++ V L+E +++ +L ++ V R +E+ + DV+++
Sbjct: 92 AIARPDLK---VTLVEPLLRRSVYLAEFIESNGLDVLVVRGRAEESGVVKEAGGADVVTS 148
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A L+ L +S P +++
Sbjct: 149 RAVAPLEKLARWSLPLIHE 167
>gi|325922601|ref|ZP_08184352.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas gardneri ATCC
19865]
gi|325546896|gb|EGD17999.1| 16S rRNA m(7)G-527 methyltransferase [Xanthomonas gardneri ATCC
19865]
Length = 212
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLAMHPYI-ASGTLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAESRAEALDEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|189040865|sp|A1AVB2|RSMG_RUTMC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 203
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L L + E + KL + L +KW+K NL + T+E +H+ DSL V
Sbjct: 6 LLIEGASLMNIKLESEQISKLMNYLKLIIKWNKSYNLSAIRTMEKGVYKHLLDSLSVIAY 65
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+GSG G PGI+ SI + LV ++++ KK F+++ + +
Sbjct: 66 IK-DKSLLDVGSGAGLPGIVISIMRPEL---LVTVLDTVGKKCRFMQFAKTQLQLKNLNV 121
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
E Q+ + I +RA + ++ +L+ + L
Sbjct: 122 IKNRVENYQIEFCFEQIISRAFSKVEKILKLTQHLL 157
>gi|126667598|ref|ZP_01738567.1| glucose-inhibited division protein B [Marinobacter sp. ELB17]
gi|126627867|gb|EAZ98495.1| glucose-inhibited division protein B [Marinobacter sp. ELB17]
Length = 215
Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 6/157 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L + +L F L KW+K NL + + R + DSL +
Sbjct: 11 LDEGLAQMELKLDASQQRQLLAFLALLAKWNKAFNLTAVRDEREMVSRQLLDSLSILPFV 70
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+D+G+GGG PGI +I L + L++S KK FL+ V + R V
Sbjct: 71 -TTHHLLDVGAGGGLPGIPLAIALPDMR---FTLLDSNGKKTRFLKQCVLELGLRNLDVI 126
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R + A Q IS+RA LD + + L
Sbjct: 127 HSRAE-AYQPRELFIQISSRAFTALDNQVSWCDHLLA 162
>gi|331700389|ref|YP_004336628.1| ribosomal RNA small subunit methyltransferase G [Pseudonocardia
dioxanivorans CB1190]
gi|326955078|gb|AEA28775.1| Ribosomal RNA small subunit methyltransferase G [Pseudonocardia
dioxanivorans CB1190]
Length = 218
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + L+ W RH+ + V + P S +DLGSG G
Sbjct: 8 ERLPAAVRYAEHLATSGVDRGLIGPRETGRLWDRHILNCAVVNETIPEGSRLVDLGSGAG 67
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITT 141
PGI ++ + + L+E ++ +L V+ +V R +E +
Sbjct: 68 LPGIPLALARPDLR---IVLVEPLARRVDWLNEVLDDLGLPIEVERGRAEETDVRRRWGG 124
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
DV++ARA+A L L ++ P L
Sbjct: 125 ADVVTARAVAPLARLAGWALPLLR 148
>gi|153007341|ref|YP_001381666.1| methyltransferase GidB [Anaeromyxobacter sp. Fw109-5]
gi|166224344|sp|A7HIY6|RSMG_ANADF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152030914|gb|ABS28682.1| methyltransferase GidB [Anaeromyxobacter sp. Fw109-5]
Length = 215
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
++ L V+ E L +LE F L W++K+NL + + + +H+ DSL +
Sbjct: 6 HAALSRGLAALALPVAPEALPRLERFADRLLAWNRKVNLTTITDPAEVAEKHLVDSLLLL 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L +DLGSG G PG+ + ++E V +S KK +F++ V + +
Sbjct: 66 PLLDEVRTLLDLGSGAGLPGVPLACARPALE---VTCCDSVAKKVAFVKAVAAELDLPVR 122
Query: 127 VFACRIQEAP--QMITTCDVISARALADLDTLLEYSFPWLYQ 166
FA R + P + + D + +RAL+D + + +L
Sbjct: 123 AFAVRAEGDPEGEKLPRADAVVSRALSDPERWVPLGVRYLAP 164
>gi|254818673|ref|ZP_05223674.1| 16S rRNA methyltransferase GidB [Mycobacterium intracellulare ATCC
13950]
Length = 246
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 42 QRYATLLAGAGVERGLLGPREVDRIWDRHILNSAAVAELLGAGERVIDIGSGAGLPGIPL 101
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I +E L+ +++ FL VV + +V R +E + D +
Sbjct: 102 AIARPDLEVVLLE---PLLRRSEFLNEVVDELGLAVEVVRGRAEEPGVRDRFGSRDAAVS 158
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P L
Sbjct: 159 RAVAALDKLTKWSMPLLRP 177
>gi|22299247|ref|NP_682494.1| glucose inhibited division protein B [Thermosynechococcus elongatus
BP-1]
gi|29336654|sp|Q8DI86|RSMG_THEEB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|22295429|dbj|BAC09256.1| glucose inhibited division protein B [Thermosynechococcus elongatus
BP-1]
Length = 228
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 15/158 (9%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR--VFQLHPYPSIW 75
+ + + E+ + FY L ++ +NL + V DFW +H+ DSLR + L P
Sbjct: 21 QWQPTPQQQEQFQRFYGALLAANQGMNLTRITAVPDFWEKHLWDSLRGILPWLQPTGETL 80
Query: 76 --------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
ID+GSGGGFPG+ +I V L+E+ KK FL +
Sbjct: 81 WGAKIQQVIDIGSGGGFPGVPVAIARPDW---SVTLLEATQKKVKFLHSLGSAVGLAN-- 135
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A D+ RA+ D+ Y P L
Sbjct: 136 IYPEWGRAESHGRRYDLALIRAVGDVARCCAYGLPLLR 173
>gi|23309017|ref|NP_602288.2| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum ATCC
13032]
gi|23821575|sp|Q8NL53|RSMG_CORGL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|21325869|dbj|BAC00490.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Corynebacterium glutamicum
ATCC 13032]
Length = 223
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LEK ++ + V W RH+ + + + D+GSG G
Sbjct: 27 DNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMIT 140
PGI +I + + LIE K++ +L V + V R +E + +
Sbjct: 87 LPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVRKQVG 143
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D++++RA+A L L +S P +
Sbjct: 144 LVDIVTSRAVAPLGKLATWSLPLVK 168
>gi|307547044|ref|YP_003899523.1| glucose-inhibited division protein B [Halomonas elongata DSM 2581]
gi|307219068|emb|CBV44338.1| glucose-inhibited division protein B [Halomonas elongata DSM 2581]
Length = 220
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ NL + E+ RH+ DS V S +D+G+G G PG++ +I
Sbjct: 40 KWNRAYNLTAVRAPEEMVSRHLLDSAAVAPFV-TGSTLLDVGAGPGLPGLVLAILEPERR 98
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVISARALADLDTL 156
V L++S KK F R V + R++ + +RA A L
Sbjct: 99 ---VTLLDSNGKKVRFQRQAVMELGLTNVTPVQARVEAFEGPKEGYCEVISRAFASLGDF 155
Query: 157 LEYSFPWLYQ 166
+ S +
Sbjct: 156 VSLSADLVAD 165
>gi|271970550|ref|YP_003344746.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division-like protein [Streptosporangium roseum DSM
43021]
gi|270513725|gb|ACZ92003.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division-like protein [Streptosporangium roseum DSM
43021]
Length = 236
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
+ + + E F L L+ V W RH+ + V + P +D+GSG
Sbjct: 17 TGDAWSRAETFAELLAGPGVVRGLLGPREVPRIWDRHLLNCAVVAEAVPADVRLVDIGSG 76
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
G PG++ +I I V L+E ++ FL V+ +V R +E
Sbjct: 77 AGLPGLVLAIVRPDI---TVTLLEPLLRRTVFLEECVEALKLDNVEVLRGRAEEFAGRRE 133
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV SARA+A L+ LL++S P L +
Sbjct: 134 -FDVASARAVAPLERLLKWSLPLLRE 158
>gi|145297090|ref|YP_001139911.1| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum R]
gi|189039499|sp|A4QIE3|RSMG_CORGB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|140847010|dbj|BAF56009.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 223
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LEK ++ + V W RH+ + + + D+GSG G
Sbjct: 27 DNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMIT 140
PGI +I + + LIE K++ +L V + V R +E + +
Sbjct: 87 LPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVIRGRAEEKVVRKQVG 143
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D++++RA+A L L +S P +
Sbjct: 144 LVDIVTSRAVAPLGKLATWSLPLVK 168
>gi|291278441|ref|YP_003495276.1| glucose inhibited division protein B [Deferribacter desulfuricans
SSM1]
gi|290753143|dbj|BAI79520.1| glucose inhibited division protein B [Deferribacter desulfuricans
SSM1]
Length = 204
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 10/142 (7%)
Query: 22 SRETL-EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLG 79
S ETL EKL+ FY L + KINL + ++F+I+H DSL +F+ + + +D+G
Sbjct: 13 SDETLIEKLDIFYDL--HKNAKINLTAIKYYDEFYIKHYLDSLYIFKTNKFSFDTLMDIG 70
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQM 138
SGGGFPGI ++ + V L+ES +KK +FL+ + + ++ R + +
Sbjct: 71 SGGGFPGIPIALLYPEKK---VYLVESISKKINFLKEAIGVLKIKNVELINDRCENLKGI 127
Query: 139 ITTCDVISARALADLDTLLEYS 160
D+I+AR +A ++ +L+++
Sbjct: 128 --NIDMITARGVASVNKILKWT 147
>gi|29427800|sp|Q8FSV1|RSMG_COREF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 232
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S L + + L+K ++ + + W RH+ + +
Sbjct: 18 PRSTLPLTTPPAAAELFGDNLDKAIAYHESLATDGSVRGFIGPREIPRLWDRHILNCGVI 77
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ D+GSG G PGI +I ++ + LIE K++ +L V+++
Sbjct: 78 GEAMEEGISVADVGSGAGLPGIPLAIARPDLK---IILIEPLLKRSVYLGEVIEQLGLDN 134
Query: 126 K-VFACRIQE--APQMITTCDVISARALADLDTLLEYSFPW 163
V R +E + + DV+++RA+A L L +S P
Sbjct: 135 VSVIRGRAEEKAVRKQVGHVDVVTSRAVAPLGRLASWSLPL 175
>gi|111020645|ref|YP_703617.1| glucose-inhibited division protein B [Rhodococcus jostii RHA1]
gi|110820175|gb|ABG95459.1| methyltransferase protein GidB (glucose inhibited division protein
B) [Rhodococcus jostii RHA1]
Length = 205
Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + E +Y + L+ V W RH+ + V +L +D+GSG G
Sbjct: 4 ERFDIAERYYKSLASDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAG 63
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI +I + + L+E +++ +L V+ V R +E+ +
Sbjct: 64 LPGIPLAIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGG 120
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L+ L ++S P +++
Sbjct: 121 ADVVTSRAVAPLEKLAKWSLPLIHE 145
>gi|322379072|ref|ZP_08053475.1| Methyltransferase GidB [Helicobacter suis HS1]
gi|321148564|gb|EFX43061.1| Methyltransferase GidB [Helicobacter suis HS1]
Length = 179
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ F L L+W+ NL + ++ED H+ DS++V +D+GSG GFP +
Sbjct: 5 LQRFATLLLEWNCIHNLSGAKSLEDI-EAHINDSIQVLDFIKPFDTCLDIGSGAGFPALP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-PQMITTCDVIS 146
S+ L+E KK++FL +V A ++ RIQ P I D+I+
Sbjct: 64 LSVFCPHAR---FILVEPNIKKSAFLYHVKNTLALDNLQIKRTRIQTLNPLEIEKMDLIT 120
Query: 147 ARALADLDTLLEYSFPWLY 165
+RAL LL P+L
Sbjct: 121 SRALMPTQDLLALGMPFLK 139
>gi|86160771|ref|YP_467556.1| methyltransferase GidB [Anaeromyxobacter dehalogenans 2CP-C]
gi|123497403|sp|Q2IHR2|RSMG_ANADE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85777282|gb|ABC84119.1| 16S rRNA m(7)G-527 methyltransferase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 215
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 5/162 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L V LE + L W++K+NL + + + +H+ DSL +
Sbjct: 6 HEALARGIEALGLPVDAAARALLERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLL 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSG G PGI + + V + KK +F++ V + R +
Sbjct: 66 PFVAGARTLLDVGSGAGLPGIPLACVRRDL---SVTCCDGVAKKIAFVKAVSAELDLRVR 122
Query: 127 VFACRIQEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQ 166
A R + P+ D + +RALAD D + +L
Sbjct: 123 GVAVRAEGHPEREGLPRADAVVSRALADPDRWVPLGARYLAD 164
>gi|218437873|ref|YP_002376202.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
gi|218170601|gb|ACK69334.1| methyltransferase GidB [Cyanothece sp. PCC 7424]
Length = 243
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR---VFQLHPYPSIW 75
+ + E K + Y L ++++NL + +FW +H+ DSL L
Sbjct: 20 WQPTPEQQVKFQRLYEEILLGNRQLNLTRITESSEFWEKHLWDSLSGIIPLGLRDQELSV 79
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
ID+G+G GFPG+ +I + V L++S KK FL+ ++ K + V R++
Sbjct: 80 IDIGTGAGFPGLPVAISYPNWR---VTLLDSVQKKLLFLKSLLPKLEIKNTTVLIGRVEA 136
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLY 165
Q T D+ RA+A EY P L
Sbjct: 137 IAQDKTYRETFDLALIRAVASASVCAEYGLPLLK 170
>gi|226362888|ref|YP_002780668.1| 16S rRNA methyltransferase GidB [Rhodococcus opacus B4]
gi|226241375|dbj|BAH51723.1| methyltransferase GidB [Rhodococcus opacus B4]
Length = 227
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + E +Y + L+ V W RH+ + V +L +D+GSG G
Sbjct: 26 ERFDIAERYYKSLATDGVERGLIGPREVPRLWERHLLNCAVVGELIAEGESVVDVGSGAG 85
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI +I + + L+E +++ +L V+ V R +E+ +
Sbjct: 86 LPGIPLAIARPDLR---ITLVEPLLRRSVYLAEFVESNGLDVLVVRGRAEESGVVKEAGG 142
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A L+ L ++S P +++
Sbjct: 143 ADVVTSRAVAPLEKLAKWSLPLIHE 167
>gi|87125379|ref|ZP_01081225.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9917]
gi|86167148|gb|EAQ68409.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9917]
Length = 250
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLH 69
+ + S LE+ W++++NL DFW+ V DSL Q
Sbjct: 15 WQALGWTPSTWQLEQFVTLQEELRSWNQRVNLTRLVEGADFWVAQVLDSLWPLLNELQAP 74
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKV 127
P ID+G+GGGFPG+ +I L G + L++S +K + + + R +V
Sbjct: 75 QTPLRCIDVGTGGGFPGLAVAIALP---GARLTLVDSVGRKTAAVMAMADSLGLADRVQV 131
Query: 128 FACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI+ + P D ARA+A + EY P L +
Sbjct: 132 RTERIERTGQDPACRGRFDRAMARAVASAPVVAEYLVPLLQK 173
>gi|319790633|ref|YP_004152266.1| methyltransferase GidB [Thermovibrio ammonificans HB-1]
gi|317115135|gb|ADU97625.1| methyltransferase GidB [Thermovibrio ammonificans HB-1]
Length = 208
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR LN + E +KLE F L KW ++INL S +H+ DSL +
Sbjct: 4 LRELCTLNGIELKEEHYQKLELFKELLKKWGRRINLTSLLDDTQIEEKHLFDSLLGLKAF 63
Query: 70 P------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ D+GSGGGFPG+ ++ +E L+E + K+ FL V ++
Sbjct: 64 KEAGINVENASICDVGSGGGFPGVPLAVA---LENADFTLVEPRKKRCVFLEEVKRRLNL 120
Query: 124 RGKVFAC-RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ AC RI++ ++++ RA+ D + ++ + L +
Sbjct: 121 KNVKVACSRIEDVS---GPFNLLTMRAVEDPEGAVKITEHLLKE 161
>gi|324999876|ref|ZP_08120988.1| glucose-inhibited division protein B [Pseudonocardia sp. P1]
Length = 224
Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L+ ++ W RHV + + ++ P + +D+GSG G PGI
Sbjct: 24 ARYVEHLATSGIERGLIGPRELDRLWDRHVLNCAVLAEVVPPDAKVVDVGSGAGLPGIPL 83
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI--TTCDVISA 147
++ + + +IE ++ +L VV V R +E + DV++A
Sbjct: 84 ALARPDLR---IVMIEPLARRVDWLDEVVSDLGLDVAVERGRAEEPAVLRRWEGADVVTA 140
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+ L L P L
Sbjct: 141 RAVGPLARLAGLCLPLLRP 159
>gi|84625949|ref|YP_453321.1| glucose-inhibited division protein B [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|123520479|sp|Q2NXD0|RSMG_XANOM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84369889|dbj|BAE71047.1| methyltransferase gidB [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 212
Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + RH+ DSL + + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYI-ASGMLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KK F+R ++ R A EA T D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKVRFMREALRHLELRNARVAESRAEALDEPTAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDKLAGIIAVGGHLLRP 164
>gi|77748759|ref|NP_644464.2| 16S rRNA methyltransferase GidB [Xanthomonas axonopodis pv. citri
str. 306]
gi|23821590|sp|Q8PF23|RSMG_XANAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + + RH+ DSL + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-ASGALADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ A EA D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELGNARVAESRAEALAEPAAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|71065878|ref|YP_264605.1| 16S rRNA methyltransferase GidB [Psychrobacter arcticus 273-4]
gi|123648423|sp|Q4FS37|RSMG_PSYA2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71038863|gb|AAZ19171.1| probable glucose inhibited division protein [Psychrobacter arcticus
273-4]
Length = 238
Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 8/150 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+S + L + L W+K NL + + + I+HV D L + P +D
Sbjct: 46 GITLSAQQQRTLLLYLDQLLLWNKAYNLTAITDPVEALIKHVIDCLAIITHLP-SGSLLD 104
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+G G P +I +I ++S KK F++ + + + A RI+
Sbjct: 105 IGTGAGLPAVIIAICQPERSCTA---LDSNQKKIRFIKQISSELGLSNMQPIASRIE--- 158
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV+++RA A L +E + P L
Sbjct: 159 AHEVSYDVVTSRAFASLIDFVEVAQPRLAD 188
>gi|21115310|gb|AAM43262.1| glucose inhibited division protein B [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 249
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++ + L + L ++W+K NL + + RH+ DSL +
Sbjct: 55 LQAQSLDADFAAPLLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-VSGTL 113
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLG+G G PGI +I ++ V L+ES KKA F+R ++ A A EA
Sbjct: 114 ADLGTGPGLPGIPLAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEA 170
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARAL L ++ L
Sbjct: 171 VDEPAAYDHLTARALDTLAGIIAVGGHLLRP 201
>gi|227496611|ref|ZP_03926889.1| cell division methyltransferase [Actinomyces urogenitalis DSM
15434]
gi|226833891|gb|EEH66274.1| cell division methyltransferase [Actinomyces urogenitalis DSM
15434]
Length = 233
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 20 NVSRETLEKL-------EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
S+E E E+F + + + LV + W RH+ +S V P
Sbjct: 31 QPSQEMRELFGVAFSAAEHFADMLVAEGELRGLVGPRELPRLWSRHIVNSTAVVPFLPRR 90
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+GSG GFPGI+ ++ +E V LI++ ++ +L VV + R
Sbjct: 91 GSVADVGSGAGFPGIVVALMRPDLE---VTLIDTMERRVEWLELVVAELDLDNVTI--RR 145
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A ++ D ++ARA+A+L L+ + L
Sbjct: 146 ARAEEIKDRYDAVTARAVANLSKLVRLTSGLLRP 179
>gi|299135914|ref|ZP_07029098.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX8]
gi|298602038|gb|EFI58192.1| methyltransferase GidB [Acidobacterium sp. MP5ACTX8]
Length = 220
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSIWIDLGSGGG 83
+L + L L+W+ K NL + E+ RH +SL + + +D GSG G
Sbjct: 45 RLSQYLDLLLRWNAKTNLTAIREPEEIVRRHFGESLFAARHLASRLAPEAALLDFGSGAG 104
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FPG+ + L + V L ES+ KKASFLR V+ +V++ R++ P D
Sbjct: 105 FPGLPIQLLLPELR---VTLAESQGKKASFLREAVRTLGLATEVWSARVESMPAER-RFD 160
Query: 144 VISARALADLDTLLEYSFPWL 164
++ RA+ + L + P +
Sbjct: 161 AVTLRAVDHMQEALAAARPRV 181
>gi|122879365|ref|YP_203195.6| 16S rRNA methyltransferase GidB [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188579176|ref|YP_001916105.1| 16S rRNA methyltransferase GidB [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|189040869|sp|Q5GU13|RSMG_XANOR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238689462|sp|B2SU21|RSMG_XANOP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|188523628|gb|ACD61573.1| methyltransferase GidB [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 212
Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + L ++W+K NL + RH+ DSL + + DLG+G G PGI
Sbjct: 31 LLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYI-ASGMLADLGTGPGLPGIP 89
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I ++ V L+ES KKA F+R ++ R A EA T D ++AR
Sbjct: 90 LAITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEALDEPTAYDHLTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
AL L ++ L
Sbjct: 147 ALDTLAGIIAVGGHLLRP 164
>gi|328952572|ref|YP_004369906.1| Ribosomal RNA small subunit methyltransferase G [Desulfobacca
acetoxidans DSM 11109]
gi|328452896|gb|AEB08725.1| Ribosomal RNA small subunit methyltransferase G [Desulfobacca
acetoxidans DSM 11109]
Length = 226
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 6/161 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+L + S ET+ + + L+W+ ++NL T D ++H DSL V
Sbjct: 12 PQDLLIVGLEALGLSTSPETIRQFLVYCDELLRWNARVNLTGLKTASDVVVKHFLDSLAV 71
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+G+G GFPG+ + L + + L+E KK++FLRY+
Sbjct: 72 WPWVRDLTSLADIGTGAGFPGLALKLALPHLH---LTLLEPTGKKSTFLRYLTIHLNLAN 128
Query: 126 KVFAC---RIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A Q + RA L L + P
Sbjct: 129 VEVRQVYLTPSLARQWGPQFHGVITRAAFSLPRFLALAAPL 169
>gi|62391943|ref|YP_227345.1| 16S rRNA methyltransferase GidB [Corynebacterium glutamicum ATCC
13032]
gi|41223090|emb|CAF19035.1| GLUCOSE-INHIBITED DIVISION PROTEIN,
GIDB(S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE)
[Corynebacterium glutamicum ATCC 13032]
Length = 209
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LEK ++ + V W RH+ + + + D+GSG G
Sbjct: 13 DNLEKAIAYHESLATDGSVRGFIGPREVPRLWDRHILNCGVIGEAMDEGISVADIGSGAG 72
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMIT 140
PGI +I + + LIE K++ +L V + V R +E + +
Sbjct: 73 LPGIPLAIARPDLN---ITLIEPLLKRSVYLNEVKEALNLDNVTVVRGRAEEKVVRKQVG 129
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D++++RA+A L L +S P +
Sbjct: 130 LVDIVTSRAVAPLGKLATWSLPLVK 154
>gi|197124872|ref|YP_002136823.1| methyltransferase GidB [Anaeromyxobacter sp. K]
gi|238689896|sp|B4UKF8|RSMG_ANASK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|196174721|gb|ACG75694.1| methyltransferase GidB [Anaeromyxobacter sp. K]
Length = 215
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF 66
+ L + V LE + L W++K+NL + + + +H+ DSL +
Sbjct: 6 HEALASGIEALGLPVDEAARALLERYADRLLAWNRKVNLTAITAPAELAEKHLVDSLVLL 65
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+GSG G PG+ + + V + KK +F++ V + +
Sbjct: 66 PVLSGARTLLDVGSGAGLPGMPLACARRDL---SVTCCDGVAKKIAFVKAVSAELDLPVR 122
Query: 127 VFACRIQEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQ 166
A R + P+ D + +RALAD D + +L +
Sbjct: 123 GVAVRAEGDPEREGLPRADAVVSRALADPDRWVPVGARYLAE 164
>gi|119382762|ref|YP_913818.1| methyltransferase GidB [Paracoccus denitrificans PD1222]
gi|171704537|sp|A1AXX8|RSMG_PARDP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119372529|gb|ABL68122.1| 16S rRNA m(7)G-527 methyltransferase [Paracoccus denitrificans
PD1222]
Length = 193
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/142 (37%), Positives = 84/142 (59%), Gaps = 8/142 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+VSRET E+L + L KW+ INL+++ST++ RH+ DSL + ++ W+DL
Sbjct: 2 SVSRET-ERLATYAGLLRKWNPAINLIAASTIDQIEARHIADSLHLVEIAKNAQGSWVDL 60
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQ 137
GSGGG PGI+ +I +E ++++ES +K +FLR +++ A KV RI+ +
Sbjct: 61 GSGGGLPGIVVAIMRPDLE---LSMVESDQRKGAFLRNAIRELALPHAKVLCKRIEALDR 117
Query: 138 MITTCDVISARALADLDTLLEY 159
+ +SARALA L L+ Y
Sbjct: 118 LDAA--NLSARALAPLPQLMAY 137
>gi|149375654|ref|ZP_01893423.1| glucose-inhibited division protein B [Marinobacter algicola DG893]
gi|149360056|gb|EDM48511.1| glucose-inhibited division protein B [Marinobacter algicola DG893]
Length = 225
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ NL + R + DSL + +D+G+GGG PGI +I L
Sbjct: 38 KWNRAYNLTAVREPRQMVSRQLLDSLSILPFV-TADHLLDVGAGGGLPGIPLAITLPDRR 96
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTL 156
L++S +KK FL V + + ++ R + IS+RA LD L
Sbjct: 97 ---FTLLDSNSKKTRFLTQCVLELGLKNVEIIHGRAESC-DPAVRYPQISSRAFTALDNL 152
Query: 157 LEYSFPWLYQK 167
+ + L +
Sbjct: 153 VNWCGHLLADE 163
>gi|269958142|ref|YP_003327931.1| methyltransferase GidB [Xylanimonas cellulosilytica DSM 15894]
gi|269306823|gb|ACZ32373.1| methyltransferase GidB [Xylanimonas cellulosilytica DSM 15894]
Length = 242
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + F L + + L+ V W RH+ +S V P +D+GSG G
Sbjct: 50 EAYDDVAGFGELLREQGELRGLIGPREVSRLWERHLLNSAAVVPYLPETGTLVDIGSGAG 109
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTC 142
PGI+ ++ +++ V L+E ++ ++L VV++ V R +E
Sbjct: 110 LPGIVVAMMRLNLD---VVLVEPMERRTTWLDEVVERFGLTNVDVRRGRAEEYHGAFE-A 165
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
DV+++RA+A+L L S P L +
Sbjct: 166 DVVTSRAVANLAKLARMSLPLLRR 189
>gi|220909373|ref|YP_002484684.1| methyltransferase GidB [Cyanothece sp. PCC 7425]
gi|219865984|gb|ACL46323.1| methyltransferase GidB [Cyanothece sp. PCC 7425]
Length = 231
Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSI-------WIDLGSGGG 83
Y L L ++++NL + +FW +H+ DSL + ID+G+G G
Sbjct: 35 LYELILTGNQQLNLTRITAPLEFWEKHLWDSLSGIAPFLSPAQTDTSSHWQAIDIGTGAG 94
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT-- 140
FPG++ +I + + LI+S KK S+L V + + R +E Q
Sbjct: 95 FPGLVVAIVRPDWQ---LTLIDSTRKKISWLESTVAELGLSNVRPIWGRAEELNQHPGYH 151
Query: 141 -TCDVISARALADLDTLLEYSFPWLYQ 166
D+ RA+A D YS P+L
Sbjct: 152 QGFDLGLIRAVASADRCAAYSLPFLKP 178
>gi|126438347|ref|YP_001074038.1| 16S rRNA methyltransferase GidB [Mycobacterium sp. JLS]
gi|189045864|sp|A3Q8S0|RSMG_MYCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126238147|gb|ABO01548.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. JLS]
Length = 225
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ + W RH+ +S + +L D+GSG G PGI
Sbjct: 22 QRYAEFLATAGVERGLIGPRETDRIWDRHILNSAALGELVESGDRIADIGSGAGLPGIPL 81
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
++ + V LIE ++ FL VV V R ++ + + DV+++
Sbjct: 82 ALARPDVH---VTLIEPMQRRCEFLTEVVDALGVAVIVVRGRAEDPAVRREVGEMDVVTS 138
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+ LD L +S L +
Sbjct: 139 RAVGSLDKLATWSMGILRE 157
>gi|166710246|ref|ZP_02241453.1| glucose-inhibited division protein B [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 212
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++ + L + L ++W+K NL + RH+ DSL + +
Sbjct: 18 LQAQSLDAAFVAPLLRYLALLVRWNKTYNLTAVRDPRAMVTRHLLDSLAMQPYI-ASGML 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLG+G G PGI +I ++ V L+ES KKA F+R ++ R A EA
Sbjct: 77 ADLGTGPGLPGIPLAITRPQLQ---VTLVESNGKKARFMREALRHLELRNARVAESRAEA 133
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARAL L ++ L
Sbjct: 134 LDAPAAYDHLTARALDTLAGIIAVGGHLLRP 164
>gi|94986432|ref|YP_605796.1| methyltransferase GidB [Deinococcus geothermalis DSM 11300]
gi|189039381|sp|Q1IVV7|RSMG_DEIGD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94556713|gb|ABF46627.1| 16S rRNA m(7)G-527 methyltransferase [Deinococcus geothermalis DSM
11300]
Length = 245
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDLG 79
S E L++ + S ++NL + D ++H DSL + + +DLG
Sbjct: 21 SAEHLDRFARLLVRLTEGSAQLNLTALHQERDIVLKHFVDSLTCLRGGWLDGAARVLDLG 80
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQ---EA 135
+G GFP + +I ++ + +++ KK F+ + + R +
Sbjct: 81 TGAGFPALPLAIVRPDLQ---LVALDATRKKVDFVERTARSLELNHVQPLTGRAETLGRD 137
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
P + D + RA+A L L E + P+L
Sbjct: 138 PAQRESYDRVVTRAVAALPILAELTLPFLR 167
>gi|319957648|ref|YP_004168911.1| methyltransferase gidb [Nitratifractor salsuginis DSM 16511]
gi|319420052|gb|ADV47162.1| methyltransferase GidB [Nitratifractor salsuginis DSM 16511]
Length = 199
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR + + LE+LE+F L L+W++ NL + + ++ DSL
Sbjct: 6 LRVGLVKVGLELDERVLERLEHFTELLLEWNRVHNLTGARDRREI-EANILDSLVPLSFV 64
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
P +D+G+G GFPG++ + I L E K+ASFLR + R +V
Sbjct: 65 SKPDSLLDVGTGAGFPGLVLAAAWPEIPT---VLCEPLKKRASFLRIAALEMGLERVEVA 121
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ +IS+RA+ D LLE +
Sbjct: 122 RKRVEDLQH--EPFGLISSRAVTDTGLLLELTRHL 154
>gi|93005885|ref|YP_580322.1| methyltransferase GidB [Psychrobacter cryohalolentis K5]
gi|122415520|sp|Q1QBW5|RSMG_PSYCK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|92393563|gb|ABE74838.1| methyltransferase GidB [Psychrobacter cryohalolentis K5]
Length = 238
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL +S + L + L W+K NL + + + I+HV D L +
Sbjct: 37 ILAQAIDELGLTLSAQQQRSLLLYLDQLLLWNKAYNLTAITDPVEALIKHVIDCLAIITH 96
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
P +D+G+G G P +I +I ++S KK F++ V + +
Sbjct: 97 LP-SGSLLDIGTGAGLPAVIIAICQPERSCTA---LDSNQKKIRFIKQVSSELGLSNMQP 152
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A RI+ + DVI++RA A L + + P L
Sbjct: 153 IASRIE---AHEASYDVITSRAFASLIDFVAVAEPRLAD 188
>gi|159040586|ref|YP_001539839.1| 16S rRNA methyltransferase GidB [Salinispora arenicola CNS-205]
gi|189040819|sp|A8LXK0|RSMG_SALAI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157919421|gb|ABW00849.1| methyltransferase GidB [Salinispora arenicola CNS-205]
Length = 242
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+ + L + L+ W RH+ + + P + +D+GSG G
Sbjct: 23 DRLDLAVAYAGLLVTDGVIRGLIGPREAPRLWDRHLLNCAAATERIPLGATVVDVGSGAG 82
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--KTAARGKVFACRIQEAPQMITT 141
PG++ ++ + V L+E ++ +FL V+ + A +V R +E
Sbjct: 83 LPGLVLAVARPDL---SVVLVEPLARRTAFLVEAVEQLELGASVRVVRGRAEEVAVGGAG 139
Query: 142 C-----DVISARALADLDTLLEYSFPWL 164
DV++ARA+A LD L + P +
Sbjct: 140 VEPLTGDVVTARAVAPLDRLARWCLPLV 167
>gi|269791772|ref|YP_003316676.1| methyltransferase GidB [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099407|gb|ACZ18394.1| methyltransferase GidB [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 229
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L ++++ +E L + L + K+ L ++ ED W +H+ D + L P +
Sbjct: 5 LAMSFHLVKENEGNLRRYGALLASGNSKVRLTGTAGEEDLWEQHIVDCGALVSLLPRGAR 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA---RGKVFACR 131
ID+G+GGG PG++ ++ S + V L++S KK + + + + R +V R
Sbjct: 65 VIDVGTGGGLPGMVWALCRSDV---GVTLLDSVGKKCAAVEEMARMMGLEPHRVQVVCSR 121
Query: 132 IQEAPQM-ITTCDVISARALADLDTLLEYSFPWLY 165
+E ++ DV ARAL++ L E P +
Sbjct: 122 SEEFARLNREVYDVACARALSEAPVLAELLSPLVA 156
>gi|33863763|ref|NP_895323.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9313]
gi|55976487|sp|Q7V5Q2|RSMG_PROMM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33635346|emb|CAE21671.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9313]
Length = 247
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPS 73
++ S E LE++ L +W+ ++NL D+WI V DSL Q P
Sbjct: 19 GWHPSSEQLEQMIALQALLRQWNARVNLTRLVEGGDYWIMQVFDSLWPLQSELQNAQQPR 78
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACR 131
ID+GSGGGFPG++ +I L G + L++S +K + L+ + K R V + R
Sbjct: 79 RCIDIGSGGGFPGLVLAIALP---GARITLVDSVGRKTAALKAMAAKLGLTSRVTVRSER 135
Query: 132 IQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + P D+ ARA++ + EY P L
Sbjct: 136 AEFTGQDPCCRGLFDLAMARAVSTAPVVAEYLVPLLKP 173
>gi|212550953|ref|YP_002309270.1| glucose inhibited division protein B [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549191|dbj|BAG83859.1| glucose inhibited division protein B [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 209
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWIDLGSG 81
E + L+ W++K NL+S + + + RHV SL + Q+ + S +D+G+G
Sbjct: 17 EQKVQFFALRDLYTNWNRKANLISRKDIGNLYERHVLHSLGIAQIISFCDYSTILDVGTG 76
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GGFPG+ +I ++ L++S KK L ++ K R C+ A
Sbjct: 77 GGFPGVPLAILFPNVR---FLLLDSTAKKIKILENIISKLNLRN--VKCKCMRAEYERGQ 131
Query: 142 CDVISARALADLDTLLEYS 160
D I +RA L L+ +
Sbjct: 132 FDFIISRAAMPLLELVNIT 150
>gi|171462844|ref|YP_001796957.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192382|gb|ACB43343.1| methyltransferase GidB [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 222
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
S +L +S + LE F +W++ N + +D H+ DS+ V
Sbjct: 2 SEGLLALGIQELGLELSLANIADLELFLQEMGRWNRVHNFTAIEGEKDSVRLHLIDSIAV 61
Query: 66 FQ-----LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L+ DLGSGGG P I +I ++LIE+ KK +FL++V K
Sbjct: 62 LPVLRRFLNEASPRIADLGSGGGLPAIPIAIIQPEWR---LSLIEAIRKKTAFLQHVRGK 118
Query: 121 TAARG-KVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +V + R + A Q D + +RA +L LE S P L
Sbjct: 119 LKLKNIEVLSERAEAVAAQQSGQYDAVISRAFTNLARFLELSLPLLKP 166
>gi|256826454|ref|YP_003150414.1| glucose-inhibited division protein B [Kytococcus sedentarius DSM
20547]
gi|256689847|gb|ACV07649.1| glucose-inhibited division protein B [Kytococcus sedentarius DSM
20547]
Length = 241
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + E F L + L+ V W RHV + V + +D+GSG G
Sbjct: 27 ELLPQAERFAELLATSGAQRGLIGPREVPRLWDRHVLNCAVVADVLDGADHVLDVGSGAG 86
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITT 141
PGI ++ V L+E ++ +L VVQ+ R V R + P + T
Sbjct: 87 LPGIALALAAPDTR---VTLVEPMLRRTVWLEEVVQELDLTDRVTVIRSRAENLPSDV-T 142
Query: 142 CDVISARALADLDTLLEYSFPWL 164
V++ARA+A L TL + P +
Sbjct: 143 APVVTARAVARLSTLAPWCLPLV 165
>gi|194476666|ref|YP_002048845.1| putative glucose inhibited division protein B [Paulinella
chromatophora]
gi|171191673|gb|ACB42635.1| putative glucose inhibited division protein B [Paulinella
chromatophora]
Length = 245
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PYPSI 74
+ +++L+ L +W+ ++NL EDFWI V DSL Q P P
Sbjct: 19 GWEPVANQIDQLKLLQILLSEWNHRVNLTRLVEGEDFWITQVFDSLWPLQRLLNNPRPIR 78
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRI 132
ID+G+G GFPG+ +I L + L++S +K ++ +V+ ++ RI
Sbjct: 79 CIDVGTGCGFPGLALAIALPE---ASLTLVDSVGRKIEAVKAIVESLGLSDRISFRIERI 135
Query: 133 QEAPQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q D+ ARA+ + EY P L +
Sbjct: 136 ERTGQDLNCRNQFDMAIARAVGTPTVVAEYLLPLLAE 172
>gi|283782568|ref|YP_003373322.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis 409-05]
gi|283441362|gb|ADB13828.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis 409-05]
Length = 255
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L + LLN V E LEK + F+ + L+ + W RH+ +S V
Sbjct: 37 DELEGSPLLN--EVLGEALEKCKLFHVKLQQEGLIRGLIGPRDMNILWERHILNSAAVVP 94
Query: 68 LHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
D+GSGGGFPG++ + L + V LIE ++ +LR V
Sbjct: 95 FIKEAIVGRKNKRVADVGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLRECVALM 151
Query: 122 AARG-KVFACRIQEAPQMITT-----CDVISARALADLDTLLEYSFPWLYQ 166
+ +F R E + + DV++ RA+A + L ++ P L +
Sbjct: 152 KLKNVTIFHGRSDEVIDKVKSHEIPAFDVVTCRAVAPMTKLAGWTIPLLNK 202
>gi|330470827|ref|YP_004408570.1| 16S rRNA methyltransferase GidB [Verrucosispora maris AB-18-032]
gi|328813798|gb|AEB47970.1| 16S rRNA methyltransferase GidB [Verrucosispora maris AB-18-032]
Length = 236
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ W RH+ + V +L P + ID+GSG G PG++ +I ++ V L+
Sbjct: 39 LIGPREAPRIWDRHLLNCAVVGELIPTDATVIDVGSGAGLPGLVLAIARPDLQ---VTLL 95
Query: 105 ESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMITTC--DVISARALADLDTLLEYS 160
E ++ +FL V +V R +E DV++ARA+A LD L +
Sbjct: 96 EPLARRTTFLTEAVDALGLEDSVQVLRGRAEEVAAGPDPVRGDVVTARAVAPLDRLAAWC 155
Query: 161 FPW 163
P
Sbjct: 156 LPL 158
>gi|304320461|ref|YP_003854104.1| glucose inhibited division protein B [Parvularcula bermudensis
HTCC2503]
gi|303299363|gb|ADM08962.1| glucose inhibited division protein B [Parvularcula bermudensis
HTCC2503]
Length = 215
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
L++ +++ T + + L+ S NL++ S++ D W RH DSL++ + P
Sbjct: 11 LEDLVDAFDLDDATAALIAAYDSHLLEVSAHTNLLARSSLADRWARHYADSLQLARFIPD 70
Query: 72 -PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
S ++DLGSG GFPG++ +I V L +S KKA FL+ + V A
Sbjct: 71 HASSYLDLGSGAGFPGLLLAIVHRH-RPCRVTLCDSVGKKARFLKETAEALGLDITVEAR 129
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R + +VI+ARA+ LD LL P L
Sbjct: 130 RAEALAAAGDRFEVITARAVTALDKLLGLCAPLL 163
>gi|169632024|ref|YP_001705673.1| methyltransferase GidB (glucose-inhibited division protein B)
[Mycobacterium abscessus ATCC 19977]
gi|169243991|emb|CAM65019.1| Methyltransferase GidB (glucose-inhibited division protein B)
[Mycobacterium abscessus]
Length = 234
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + + + L+ W RH+ +S + +L ID+GSG G
Sbjct: 19 ERLARAVEYVAALATIGVERGLIGPRETGRLWGRHILNSAVLGELLEAGERVIDVGSGAG 78
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE--APQMIT 140
PGI I + + L+E ++ FLR ++++ V R +E +
Sbjct: 79 LPGIPLGIARPDV---GIVLVEPMLRRTEFLREMIEQLGLTNVSVVRGRAEEPAVIAEVG 135
Query: 141 TCDVISARALADLDTLLEYSFPW 163
D +++RA+A LD + +S P
Sbjct: 136 GADAVTSRAVAALDKIARWSLPL 158
>gi|25029499|ref|NP_739553.1| glucose-inhibited division protein B [Corynebacterium efficiens
YS-314]
gi|259508319|ref|ZP_05751219.1| 16S rRNA methyltransferase GidB [Corynebacterium efficiens YS-314]
gi|23494788|dbj|BAC19753.1| putative glucose inhibited division protein B [Corynebacterium
efficiens YS-314]
gi|259164137|gb|EEW48691.1| 16S rRNA methyltransferase GidB [Corynebacterium efficiens YS-314]
Length = 209
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+K ++ + + W RH+ + + + D+GSG G
Sbjct: 13 DNLDKAIAYHESLATDGSVRGFIGPREIPRLWDRHILNCGVIGEAMEEGISVADVGSGAG 72
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE--APQMIT 140
PGI +I ++ + LIE K++ +L V+++ V R +E + +
Sbjct: 73 LPGIPLAIARPDLK---IILIEPLLKRSVYLGEVIEQLGLDNVSVIRGRAEEKAVRKQVG 129
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A L L +S P
Sbjct: 130 HVDVVTSRAVAPLGRLASWSLPLAK 154
>gi|320109303|ref|YP_004184893.1| methyltransferase GidB [Terriglobus saanensis SP1PR4]
gi|319927824|gb|ADV84899.1| methyltransferase GidB [Terriglobus saanensis SP1PR4]
Length = 196
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ EKL + L LKW+ + NL + E RH +SL + L P S +D GS
Sbjct: 15 LPDGVEEKLAQYLELILKWNARTNLTAVRDAEGIVRRHFGESLFLGGLLPEFSTLLDFGS 74
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G GFPGI + V L ES+ KKASFLR V+ A V+A R++ P+
Sbjct: 75 GAGFPGIPVQLIRP---LSKVTLAESQGKKASFLREAVRSLAIPSDVWAARVETMPESK- 130
Query: 141 TCDVISARAL 150
T DV++ RA+
Sbjct: 131 TFDVVAMRAV 140
>gi|296131539|ref|YP_003638789.1| methyltransferase GidB [Cellulomonas flavigena DSM 20109]
gi|296023354|gb|ADG76590.1| methyltransferase GidB [Cellulomonas flavigena DSM 20109]
Length = 228
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F+ ++ + L+ V W RH+ +S V P + +D+GSG G PG++
Sbjct: 36 ETFHAYLVEEGELRGLIGPREVARLWERHMLNSAAVVPFLPDHGVIVDVGSGAGLPGVVV 95
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+ + + V L+E ++ ++L VV++T +V R QE + D ++AR
Sbjct: 96 AAMRPAAQ---VILVEPMERRVAWLEDVVERTRLTNVEVRRARAQELDGAVE-ADAVTAR 151
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A LD L ++ P + +
Sbjct: 152 AVASLDKLYRWTAPLVRE 169
>gi|139439863|ref|ZP_01773228.1| Hypothetical protein COLAER_02262 [Collinsella aerofaciens ATCC
25986]
gi|133774791|gb|EBA38611.1| Hypothetical protein COLAER_02262 [Collinsella aerofaciens ATCC
25986]
Length = 261
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIW 75
+ +V+ L K L L+ +K NL VED + H+ DSL +
Sbjct: 40 SLSVTDIELRKCIQHLDLVLETNKTTNLTRILNVEDAAVLHILDSLVLLPYINKAPEGAL 99
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE 134
+D+G+G GFPGI +I I+S KK + V R++E
Sbjct: 100 LDMGTGAGFPGIPLTITTHRKA----TYIDSVGKKVDAVNSFVHALGLKHAHAVHDRLEE 155
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A V++ARALA L L+EY+ P+L
Sbjct: 156 YARSHKKQFSVVTARALAPLPILVEYAAPYLRD 188
>gi|118602125|ref|YP_903340.1| methyltransferase GidB [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567064|gb|ABL01869.1| 16S rRNA m(7)G-527 methyltransferase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 190
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ E + KL + L +KW+K NL + T+E +H+ DSL V +D
Sbjct: 2 NIKLESEQISKLMNYLKLIIKWNKSYNLSAIRTMEKGVYKHLLDSLSVIAYIK-DKSLLD 60
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG G PGI+ SI + LV ++++ KK F+++ + + E Q
Sbjct: 61 VGSGAGLPGIVISIMRPEL---LVTVLDTVGKKCRFMQFAKTQLQLKNLNVIKNRVENYQ 117
Query: 138 MITTCDVISARALADLDTLLEYSFPWL 164
+ + I +RA + ++ +L+ + L
Sbjct: 118 IEFCFEQIISRAFSKVEKILKLTQHLL 144
>gi|317151994|ref|YP_004120042.1| glucose inhibited division protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942245|gb|ADU61296.1| glucose inhibited division protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 221
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-----YPSIW 75
V L + +KW+ K+NLV S + V DSL + +
Sbjct: 22 VEDGQAASLTDYLSQLVKWNAKMNLVGPSDWRTIFDTLVVDSLYLADFLNGLDLGNAPLC 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
+DLG+G G PGI I G L+ES++K+A+F+R V + VF R ++
Sbjct: 82 LDLGAGAGLPGIPLRILWPH---GDYWLVESRDKRATFMRSAVGRLGLTATSVFHGRAED 138
Query: 135 APQMITT------CDVISARALADLDTLLEYSFPWLYQ 166
A + D+I +RA LL + P L
Sbjct: 139 ALDRLARHGQHATADLIVSRAFMPWPQLLPFVRPMLRP 176
>gi|145597097|ref|YP_001161394.1| 16S rRNA methyltransferase GidB [Salinispora tropica CNB-440]
gi|189040822|sp|A4XDK0|RSMG_SALTO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|145306434|gb|ABP57016.1| methyltransferase GidB [Salinispora tropica CNB-440]
Length = 242
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L + L+ W RH+ + V + P S +D+GSG G PG++ +
Sbjct: 30 AYAGLLVTDGVVRGLIGPREAPRIWDRHLLNCAAVAERIPLGSTVLDVGSGAGLPGLVLA 89
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTC-----D 143
+ + V L+E ++ +FL V + +V R +E D
Sbjct: 90 VARPDL---SVTLVEPLARRTAFLVEAVAQLDLAASVQVVRGRAEEIASGGGGVEPLTGD 146
Query: 144 VISARALADLDTLLEYSFPW 163
V++ARA+A LD L + P
Sbjct: 147 VVTARAVAPLDRLARWCLPL 166
>gi|257455183|ref|ZP_05620418.1| 16S rRNA methyltransferase GidB [Enhydrobacter aerosaccus SK60]
gi|257447145|gb|EEV22153.1| 16S rRNA methyltransferase GidB [Enhydrobacter aerosaccus SK60]
Length = 215
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 8/157 (5%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+Y L+ +S E +L Y+ L W+K NL + + I+H+ D
Sbjct: 11 QYVKLQPQLQQALSELKLPLSDEQQLQLLYYLQQLLFWNKAYNLTAIKDDQQALIKHIFD 70
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + P +D+G+G G P +I +I V ++S KK F++ V +
Sbjct: 71 SLSIVPFLPAGD-LLDIGTGAGLPAVIVAICQPQ---RAVTALDSNQKKIRFIKQVASEL 126
Query: 122 AARG-KVFACRIQEAPQMITTCDVISARALADLDTLL 157
+ A RI+ T VI++RA A L +
Sbjct: 127 GLKNLTPVASRIE---AHEGTYQVITSRAFASLVDFV 160
>gi|289810085|ref|ZP_06540714.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 123
Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+++ L + + KW+K NL S + +RH+ DS+ V +ID
Sbjct: 15 GISLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGQRFID 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+G+G G PGI +I L L++S K+ FLR V +
Sbjct: 74 VGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENIT 120
>gi|285016924|ref|YP_003374635.1| methyltransferase gidb (glucose-inhibited division protein b)
[Xanthomonas albilineans GPE PC73]
gi|283472142|emb|CBA14649.1| probable methyltransferase gidb (glucose-inhibited division protein
b) [Xanthomonas albilineans]
Length = 213
Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W++ NL + + RH+ DSL + + DLG+G G PG+ +I +
Sbjct: 41 RWNRTYNLTAIRDPHEMVTRHLLDSLAMQPFV-GEGVLADLGTGPGLPGLPLAIARPHLH 99
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
V L+ES KKA FLR V++ A EA D+++ARAL L ++
Sbjct: 100 ---VTLVESNGKKARFLREAVRQLRLDNARVAETRAEALDEPGGYDLLTARALDTLAGIV 156
Query: 158 EYSFPWLYQ 166
L
Sbjct: 157 AVGGHLLRP 165
>gi|298253036|ref|ZP_06976828.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis 5-1]
gi|297532431|gb|EFH71317.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis 5-1]
Length = 236
Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
L + LLN V E LEK + F+ + L+ + W RH+ +S V
Sbjct: 18 DELEGSPLLN--EVLGEALEKCKLFHVKLQQEGLIRGLIGPRDMNILWERHILNSAAVVP 75
Query: 68 LHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
D+GSGGGFPG++ + L + V LIE ++ +LR V
Sbjct: 76 FIKEAIVGRKNKRVADVGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLRECVALM 132
Query: 122 AARG-KVFACRIQEAPQMITT-----CDVISARALADLDTLLEYSFPWLYQ 166
+ +F R E + + DV++ RA+A + L ++ P L +
Sbjct: 133 KLKNVTIFHGRSDEVIDKVKSHEIPAFDVVTCRAVAPMTKLAGWTIPLLNK 183
>gi|124022160|ref|YP_001016467.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9303]
gi|189040708|sp|A2C6U2|RSMG_PROM3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123962446|gb|ABM77202.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9303]
Length = 247
Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPS 73
++ S E LE++ L +W+ ++NL D+WI V DSL Q P
Sbjct: 19 GWHPSSEQLEQMIALQALLRQWNARVNLTRLVEGGDYWILQVFDSLWPLQSELQNAQQPR 78
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACR 131
ID+GSGGGFPG++ +I L G + L++S +K + L+ + K R V + R
Sbjct: 79 RCIDIGSGGGFPGLVLAIALP---GASITLVDSVGRKTAALKAMAAKLGLTSRVTVRSER 135
Query: 132 IQEAPQM---ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ Q D+ ARA++ + EY P L
Sbjct: 136 AELTGQDHCCRGLFDLAMARAVSTAPVVAEYLVPLLKP 173
>gi|66770427|ref|YP_245189.1| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. 8004]
gi|77747974|ref|NP_639380.2| 16S rRNA methyltransferase GidB [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|23821585|sp|Q8P3N0|RSMG_XANCP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81303626|sp|Q4UP54|RSMG_XANC8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|66575759|gb|AAY51169.1| glucose inhibited division protein B [Xanthomonas campestris pv.
campestris str. 8004]
Length = 212
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++ + L + L ++W+K NL + + RH+ DSL +
Sbjct: 18 LQAQSLDADFAAPLLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-VSGTL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLG+G G PGI +I ++ V L+ES KKA F+R ++ A A EA
Sbjct: 77 ADLGTGPGLPGIPLAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEA 133
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARAL L ++ L
Sbjct: 134 VDEPAAYDHLTARALDTLAGIIAVGGHLLRP 164
>gi|227487668|ref|ZP_03917984.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227541378|ref|ZP_03971427.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227092362|gb|EEI27674.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227182929|gb|EEI63901.1| glucose-inhibited division protein B [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 205
Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+Y L + + W RH+ L+ +D+GSG G PG+
Sbjct: 20 RAYYDLLATDGLTRGFMGPREKDRLWDRHILPCALTESLYAEGKTVVDVGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISAR 148
+I ++ V L+E K++ FLR V +K A R ++ P + D ++R
Sbjct: 80 AIARPDLQ---VTLLEPLLKRSVFLREVAEKLGLENVHVARGRAEDKP--VGKMDYATSR 134
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L L ++S P + +
Sbjct: 135 AVAPLWKLAKWSLPLVRK 152
>gi|47459402|ref|YP_016264.1| glucose-inhibited division protein B [Mycoplasma mobile 163K]
gi|55976418|sp|Q6KH77|RSMG_MYCMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|47458732|gb|AAT28053.1| glucose inhibited division protein b [Mycoplasma mobile 163K]
Length = 225
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--------PYPS 73
+ E KLE F L +W+KKINL E+ W + +S F+
Sbjct: 32 NPEKFNKLEQFVSLVEEWNKKINLTGF-EGENLWKEGINESFFCFEKILETKNLNDFENK 90
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
W+D+GSG GFP I +I I +IES +K+ FL V +K + K+F R +
Sbjct: 91 SWVDIGSGAGFPIIPFAIIYPKIN---FYIIESNSKRVRFLELVNEKLNLKIKIFNTRAE 147
Query: 134 EAPQMITTCDVISARALADLDTLLEY 159
++ D +SARA+A LD L++Y
Sbjct: 148 NFSEL--KFDFVSARAVAHLDLLIKY 171
>gi|189040868|sp|B0RYS0|RSMG_XANCB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 212
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 4/151 (2%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L ++ + L + L ++W+K NL + + RH+ DSL +
Sbjct: 18 LQAQSLDADFAAPLLRYLTLLVRWNKTYNLTAVRDPREMVTRHLLDSLAMQPYI-VSGTL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLG+G G PGI +I ++ V L+ES KKA F+R ++ A A EA
Sbjct: 77 ADLGTGPGLPGIPLAITRPQLQ---VTLVESNGKKARFMREALRHLALGNARVAEARAEA 133
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
D ++ARAL L ++ L
Sbjct: 134 VDEPAAYDHLTARALDTLAGIIAVGGHLLRP 164
>gi|313144942|ref|ZP_07807135.1| methyltransferase gidB [Helicobacter cinaedi CCUG 18818]
gi|313129973|gb|EFR47590.1| methyltransferase gidB [Helicobacter cinaedi CCUG 18818]
Length = 185
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ E ++ + F L+W+K NL +S +E + DSL + +D+GS
Sbjct: 2 LGDECFKQFQTFGKELLEWNKIHNLTGASCMESVLEN-IFDSLYPLKFIDEFESCMDIGS 60
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP-QM 138
GGGFP + +I + LIE + K+ASFL+ + + + V + RI+E P
Sbjct: 61 GGGFPALPLAIAKPQSQ---FFLIEPRAKRASFLQNISVQLGLKNVKVHSMRIEEVPISE 117
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ +I++RAL D L+ S +L
Sbjct: 118 VNNIALITSRALMDARNLIALSRKFL 143
>gi|291288766|ref|YP_003505582.1| methyltransferase GidB [Denitrovibrio acetiphilus DSM 12809]
gi|290885926|gb|ADD69626.1| methyltransferase GidB [Denitrovibrio acetiphilus DSM 12809]
Length = 205
Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF--QLHPYPSI 74
+ + + E LE++E FY + + + +NL + + F+ +HV DS +F + H
Sbjct: 4 SYFEFTDEMLERIEKFYDMHI--NATLNLTAIKDKDSFYTKHVLDSFLLFTEKKHLLKGK 61
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
D+G+GGGFPG+I ++ + L++S KK FL V++ +V R +
Sbjct: 62 IGDIGTGGGFPGVILAVMYPELN---FTLVDSVAKKCRFLEDAVKELGLTNVEVITSRSE 118
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
+ I +R +A ++ +++Y+
Sbjct: 119 DIKNR--KFSTILSRGVAKVEQMIKYTMNL 146
>gi|296125941|ref|YP_003633193.1| methyltransferase GidB [Brachyspira murdochii DSM 12563]
gi|296017757|gb|ADG70994.1| methyltransferase GidB [Brachyspira murdochii DSM 12563]
Length = 202
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++ E KL + L + ++K +N+ + T EDF+ H+ DSL + ID+G
Sbjct: 14 QITEENKNKLLKYANLVMDYNKNVNITGAKTTEDFFYDHIADSLLALNIFHDYDNIIDIG 73
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGG P I +I L ESKNKK FLR ++ C A ++
Sbjct: 74 SGGGLPSIPLAIIY---NNKKFTLCESKNKKCEFLRLAKKELELNNIEIKC--INAYEIK 128
Query: 140 TTCDVISARALADLDTLLE 158
D +++RA +D+ TL++
Sbjct: 129 EKYDTVTSRAFSDISTLIK 147
>gi|254777657|ref|ZP_05219173.1| 16S rRNA methyltransferase GidB [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 248
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 44 QRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPL 103
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I +E L+ +++ FL VV + +V R +E P D +
Sbjct: 104 AIARPDLEVVLLE---PLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVS 160
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A LD L ++S P L
Sbjct: 161 RAVAALDKLTKWSMPLLR 178
>gi|119718912|ref|YP_925877.1| methyltransferase GidB [Nocardioides sp. JS614]
gi|189045870|sp|A1SQV5|RSMG_NOCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119539573|gb|ABL84190.1| 16S rRNA m(7)G-527 methyltransferase [Nocardioides sp. JS614]
Length = 250
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F L L+ W RH+ + + Q P + DLGSG G PG++
Sbjct: 29 ERFVELLAGDGVVRGLIGPRETPRLWDRHLLNCALLAQQVPLEATVADLGSGAGLPGVVL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+I + V L+E ++ +FL VV + R +V R + V+++R
Sbjct: 89 AIARPDLR---VTLVEPLLRRTTFLEEVVAELGLDRVEVLRARAEALHGDR-RFAVVTSR 144
Query: 149 ALADLDTLLEYSFPWLYQ 166
ALA LD LL +S P +
Sbjct: 145 ALAPLDRLLGWSMPLVEP 162
>gi|315654395|ref|ZP_07907303.1| glucose inhibited division protein B [Mobiluncus curtisii ATCC
51333]
gi|315491430|gb|EFU81047.1| glucose inhibited division protein B [Mobiluncus curtisii ATCC
51333]
Length = 226
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ L + ++ S + Y+ L + L+ W RH+ + + +L P
Sbjct: 24 DGLADVFDTSAGQM---RYYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSELLPEG 80
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+GSG G PG++ +I + + LIES ++ +L++ V++ ++ R
Sbjct: 81 VQVADVGSGAGLPGLVLAIGRPDL---SLTLIESMARRCEWLQFCVEELGLDNVRIRNAR 137
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + ++ARA+ +L TLL ++ P + ++
Sbjct: 138 AEDV-RGKQNFSYLTARAVGNLSTLLGWTAPLVKKQ 172
>gi|320095101|ref|ZP_08026810.1| methyltransferase GidB [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977968|gb|EFW09602.1| methyltransferase GidB [Actinomyces sp. oral taxon 178 str. F0338]
Length = 236
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ F + + + L+ +E W RH+ +S V P +D+GSG G PGI+
Sbjct: 49 IAEFARMLEEEGELRGLLGPRDMERIWSRHLVNSAAVLDFLPRRGQVLDIGSGAGLPGIV 108
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ ++ V+L E ++ +L VV E + DV++AR
Sbjct: 109 IAVCRPDLD---VHLAEPMARRCEWLADVVDALGLDNTTIHQARAEELRGKGKADVVTAR 165
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A++ L+ + +
Sbjct: 166 AVANMAKLVRMTSKLIAP 183
>gi|41410443|ref|NP_963279.1| glucose-inhibited division protein B [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|45645208|sp|Q9L7M3|RSMG_MYCPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|41399277|gb|AAS06895.1| Gid [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 248
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 44 QRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPL 103
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I +E L+ +++ FL VV + +V R +E P D +
Sbjct: 104 AIARPDLEVVLLE---PLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVS 160
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A LD L ++S P L
Sbjct: 161 RAVAALDKLTKWSMPLLR 178
>gi|159473280|ref|XP_001694767.1| methyltransferase [Chlamydomonas reinhardtii]
gi|158276579|gb|EDP02351.1| methyltransferase [Chlamydomonas reinhardtii]
Length = 258
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 65/187 (34%), Gaps = 55/187 (29%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------------------- 71
+ L+ ++ +NL + D W RHV DSL + +
Sbjct: 3 TYLDHMLEVNQTMNLTAVRDKGDAWQRHVVDSLALLPVIERHAAAMGLLRPAGPAVAGAE 62
Query: 72 -----------------------------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
ID+G+G G PG+I + + V
Sbjct: 63 AGAAEARGSSGRSAGSSSGSSSRSSGDGVELRLIDVGTGAGLPGMIIAAARPQWK---VT 119
Query: 103 LIESKNKKASFLRYVVQKTAARGK-VFACRIQE---APQMITTCDVISARALADLDTLLE 158
L+++ K+ FL+ + R V CR +E P++ DV ARA+A+ L E
Sbjct: 120 LLDTLRKRCDFLKEAAARAGLRNVDVVWCRAEEGGRRPELRQAYDVAVARAVAETRVLAE 179
Query: 159 YSFPWLY 165
P++
Sbjct: 180 LCMPFVR 186
>gi|108802367|ref|YP_642564.1| 16S rRNA methyltransferase GidB [Mycobacterium sp. MCS]
gi|119866060|ref|YP_936012.1| methyltransferase GidB [Mycobacterium sp. KMS]
gi|122976256|sp|Q1B0S6|RSMG_MYCSS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045865|sp|A1U8R4|RSMG_MYCSK RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108772786|gb|ABG11508.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. MCS]
gi|119692149|gb|ABL89222.1| 16S rRNA m(7)G-527 methyltransferase [Mycobacterium sp. KMS]
Length = 225
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ + W RH+ +S + + D+GSG G PGI
Sbjct: 22 QRYAEFLATAGVERGLIGPRETDRIWDRHILNSAALGESVESGDRIADIGSGAGLPGIPL 81
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
++ + V LIE ++ FL VV V R + + + DV+++
Sbjct: 82 ALARPDVH---VTLIEPMQRRCEFLTEVVDALGVAVIVVRGRAENPAVRREVGEMDVVTS 138
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+ LD L +S L +
Sbjct: 139 RAVGSLDKLATWSMGILRE 157
>gi|294675619|ref|YP_003576234.1| methyltransferase GidB [Rhodobacter capsulatus SB 1003]
gi|294474439|gb|ADE83827.1| methyltransferase GidB [Rhodobacter capsulatus SB 1003]
Length = 196
Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats.
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQ 92
L KW+ INLVS T+ + W RH DS ++ + + P W DLGSGGGFPG++ +
Sbjct: 15 ALLKKWNPAINLVSPRTLVEVWTRHFLDSAQILRSVDHAPQHWADLGSGGGFPGLVVGVL 74
Query: 93 LSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
+ L+ES +KA+FL V+ V RI+ + DV+SARALA
Sbjct: 75 AKEQFPDMRLTLVESDKRKAAFLLNAVRDLGLSAVVADKRIESLEPL--KADVLSARALA 132
Query: 152 DLDTLLEYSFPWLYQ 166
L+TLL Y+ L
Sbjct: 133 PLETLLAYAERHLSP 147
>gi|315657683|ref|ZP_07910565.1| glucose inhibited division protein B [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492155|gb|EFU81764.1| glucose inhibited division protein B [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 226
Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ L + ++ S + Y+ L + L+ W RH+ + + QL P
Sbjct: 24 DGLADVFDTSAGQM---RYYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEG 80
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+GSG G PG++ +I + + LIES ++ +L++ +++ ++ R
Sbjct: 81 VQVADVGSGAGLPGLVLAIGRPDL---SLTLIESMARRCEWLQFCIEELGLDNVRIRNAR 137
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + T ++ARA+ +L TLL ++ P + ++
Sbjct: 138 AEDI-RGKQTFSYLTARAVGNLSTLLGWTAPLVKKQ 172
>gi|224438515|ref|ZP_03659435.1| glucose-inhibited division protein B [Helicobacter cinaedi CCUG
18818]
Length = 198
Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ E ++ + F L+W+K NL +S +E + DSL + +D+GS
Sbjct: 15 LGDECFKQFQTFGKELLEWNKIHNLTGASCMESVLEN-IFDSLYPLKFIDEFESCMDIGS 73
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP-QM 138
GGGFP + +I + LIE + K+ASFL+ + + + V + RI+E P
Sbjct: 74 GGGFPALPLAIAKPQSQ---FFLIEPRAKRASFLQNISVQLGLKNVKVHSMRIEEVPISE 130
Query: 139 ITTCDVISARALADLDTLLEYSFPWL 164
+ +I++RAL D L+ S +L
Sbjct: 131 VNNIALITSRALMDARNLIALSRKFL 156
>gi|289523965|ref|ZP_06440819.1| 16S rRNA methyltransferase GidB [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289502621|gb|EFD23785.1| 16S rRNA methyltransferase GidB [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 235
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
+KL + L + + L + + + H+ D L L P +D+G+GGG PG
Sbjct: 25 DKLMDYAKLLGLANSRARLTGPADPKCIFDEHIVDCLAALPLIPSNIRIVDIGTGGGLPG 84
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQE-APQMITTCDV 144
++ ++ S + V+L++S KK L +V+ V C R +E A D+
Sbjct: 85 LVWAVCRSDV---FVDLLDSVRKKCLVLEEMVRNLNLANVVVHCSRAEEFASSNKDLYDL 141
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
+ARA++ L LLEY P + +
Sbjct: 142 AAARAVSHLGVLLEYFSPLVRR 163
>gi|304390474|ref|ZP_07372427.1| 16S rRNA methyltransferase GidB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326230|gb|EFL93475.1| 16S rRNA methyltransferase GidB [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 226
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ L + ++ S + Y+ L + L+ W RH+ + + QL P
Sbjct: 24 DGLADVFDTSAGQM---RYYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEG 80
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+GSG G PG++ +I + + LIES ++ +L++ +++ ++ R
Sbjct: 81 VQVADVGSGAGLPGLVLAIGRPDL---SLTLIESMARRCEWLQFCIEELGLDNVRIRNAR 137
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + T ++ARA+ +L TLL ++ P + ++
Sbjct: 138 AEDI-RGKQTFSYLTARAVGNLSTLLGWTAPLVKKQ 172
>gi|15603936|ref|NP_220451.1| 16S rRNA methyltransferase GidB [Rickettsia prowazekii str. Madrid
E]
gi|6225446|sp|Q9ZE89|RSMG_RICPR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|3860627|emb|CAA14528.1| GLUCOSE INHIBITED DIVISION PROTEIN B (gidB) [Rickettsia prowazekii]
gi|292571654|gb|ADE29569.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia prowazekii Rp22]
Length = 191
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLG 79
V E +EKLE F L KW+K INL+S +T+ +FW RH+ DSL++ Q I ID+G
Sbjct: 3 VQSEIIEKLEIFQNLIKKWNKSINLISDNTIPNFWQRHILDSLQLMQYISNKEIHLIDIG 62
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SG GFPGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 63 SGAGFPGIVLSIAG----VTKVSLIEADLRKCIFLAKASKISNNSIQIINQRIEKIE--- 115
Query: 140 TTCDVISARALADLDTLLEYS 160
C +++ RA ++L+T+ Y+
Sbjct: 116 IDCSILTCRAFSNLNTIFNYT 136
>gi|6969267|gb|AAF33688.1| putative gidB [Mycobacterium avium subsp. paratuberculosis]
Length = 245
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + L+ V+ W RH+ +S V +L ID+GSG G PGI
Sbjct: 44 QRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPL 103
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I +E L+ +++ FL VV + +V R +E P D +
Sbjct: 104 AIARPDLEVVLLE---PLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVS 160
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A LD L ++S P L
Sbjct: 161 RAVAALDKLTKWSMPLLR 178
>gi|225620215|ref|YP_002721472.1| glucose-inhibited division protein B [Brachyspira hyodysenteriae
WA1]
gi|254766883|sp|C0R0Y0|RSMG_BRAHW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|225215034|gb|ACN83768.1| glucose-inhibited division protein B [Brachyspira hyodysenteriae
WA1]
Length = 204
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M Y +SIL + + N + EKL + L + ++K +N+ + T EDF+ H+
Sbjct: 1 MNY---DSIL--DNISNIIKIDENKKEKLIQYASLVIDYNKNVNITGAKTEEDFFNDHIA 55
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L + ID+GSG G P I +I + + L ESKNKKA FLR K
Sbjct: 56 DCLLALDIFYDYDNIIDIGSGSGLPSIPLAIIFNDKK---FTLCESKNKKAEFLRLAKDK 112
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLE 158
C A ++ D I++RA +D+ TLL+
Sbjct: 113 LGLDNIEVKC--INAYEIKEKYDTITSRAFSDISTLLK 148
>gi|298345822|ref|YP_003718509.1| glucose-inhibited division protein B [Mobiluncus curtisii ATCC
43063]
gi|298235883|gb|ADI67015.1| glucose-inhibited division protein B [Mobiluncus curtisii ATCC
43063]
Length = 226
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+ L + ++ S + Y+ L + L+ W RH+ + + QL P
Sbjct: 24 DGLADVFDTSAGQM---RYYADLLAHEGLEQGLLGPREAGRIWSRHILNCWVLSQLLPEG 80
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+GSG G PG++ +I + + LIES ++ +L++ +++ ++ R
Sbjct: 81 VQVADVGSGAGLPGLVLAIGRPDL---SLTLIESMARRCEWLQFCIEELGLDNVRIRNAR 137
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + T ++ARA+ +L TLL ++ P + ++
Sbjct: 138 AEDI-RGKQTFSYLTARAVGNLSTLLGWTAPLVKKQ 172
>gi|319949437|ref|ZP_08023498.1| 16S rRNA methyltransferase GidB [Dietzia cinnamea P4]
gi|319436899|gb|EFV91958.1| 16S rRNA methyltransferase GidB [Dietzia cinnamea P4]
Length = 239
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+V E L + + L+ W RHV +S +D+G
Sbjct: 24 DVFGERLPLAIRYVEFLGTAGLERGLMGPRERPRLWDRHVLNSAAAASALEDGEAVVDIG 83
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--Q 137
SG G PGI ++ + V L+E ++ +FL ++ + +V R +E
Sbjct: 84 SGAGLPGIPLALARPDLR---VTLVEPLLRRVTFLEEIIDELGIDVRVVRGRAEEKAVIA 140
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
DV+++RA+A L L +S P L
Sbjct: 141 TAGNADVVTSRAVAPLAKLAGWSAPLLR 168
>gi|289642459|ref|ZP_06474604.1| methyltransferase GidB [Frankia symbiont of Datisca glomerata]
gi|289507718|gb|EFD28672.1| methyltransferase GidB [Frankia symbiont of Datisca glomerata]
Length = 245
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 7/145 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
E + L + L+ + W RH+ +S V + + +D+GSG G P
Sbjct: 19 FELARVYADLLATAGVERGLIGPREADRLWERHLLNSAVVAEAIDQAAAVVDVGSGAGLP 78
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQEAPQMITT-- 141
GI ++ + V L+E ++ FL+ V + G+ V R +A + T
Sbjct: 79 GIPLALARPDLR---VTLLEPMQRRCLFLQEAVGRLGLEGRVTVLRGRAPDAAATVETHA 135
Query: 142 CDVISARALADLDTLLEYSFPWLYQ 166
DV ARALA L+ L P +
Sbjct: 136 FDVCLARALAPLERLGAMLLPMVKP 160
>gi|284097363|ref|ZP_06385487.1| Glucose inhibited division protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283831128|gb|EFC35114.1| Glucose inhibited division protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 219
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGS 80
+ T+EK ++ +KW++K NL E+ DSL +D+GS
Sbjct: 24 QATVEKFVFYLQELMKWNEKTNLTGHKQEEEIIGNLFIDSLACTMVFSSDTACSILDIGS 83
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE---AP 136
G GFPGI ++ + V L+E KK +FL +V+ + +V ACRI+E P
Sbjct: 84 GAGFPGIPMALVSPQQD---VTLLEPNLKKVAFLHHVIGSLGLKNVRVEACRIEECSKKP 140
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D + +AL D L Y P L +
Sbjct: 141 EYDKKFDWVFMKAL-RFDVGLAYVTPILSE 169
>gi|184201998|ref|YP_001856205.1| 16S rRNA methyltransferase GidB [Kocuria rhizophila DC2201]
gi|183582228|dbj|BAG30699.1| methyltransferase GidB [Kocuria rhizophila DC2201]
Length = 253
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E LE + + L+ W RHV + V +L + +D+GSG G
Sbjct: 61 ERLELAQRYTEHLASSGIVRGLIGPREAPRLWERHVLNCAVVQELIAPDARVVDVGSGAG 120
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG+ +I + + L+E ++ +L VV V R ++A + +
Sbjct: 121 LPGLCLAIARPDLH---LTLVEPLERRVVWLDEVVADLGLDNVTVLRARAEQAKKDVGPV 177
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV++ARA++ L L++ + P L
Sbjct: 178 DVVTARAVSALVGLVDITLPLLK 200
>gi|149185270|ref|ZP_01863587.1| glucose inhibited division protein B [Erythrobacter sp. SD-21]
gi|148831381|gb|EDL49815.1| glucose inhibited division protein B [Erythrobacter sp. SD-21]
Length = 208
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 19 YNVSR-ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
++S ET+EKLE + + +++ NLVS +++D W+RH DS ++ P + W
Sbjct: 13 LSLSDPETIEKLELLFNALREENERQNLVSRGSLDDVWVRHFADSAQLIPHVPRETKGPW 72
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
DLGSG GFPG++ ++ L+ES+ ++ +L+ +V + + E
Sbjct: 73 FDLGSGAGFPGLVLALLRPD---EPTVLVESRKRRLEWLQAMVTRLGLANCEIEGKRLEL 129
Query: 136 PQMITTCDVISARALADLDTLLEYSFPW 163
VISARA A L LL+ S +
Sbjct: 130 VDTRKAA-VISARAFAPLPKLLDLSARF 156
>gi|255020231|ref|ZP_05292300.1| Ribosomal RNA small subunit methyltransferase G [Acidithiobacillus
caldus ATCC 51756]
gi|254970373|gb|EET27866.1| Ribosomal RNA small subunit methyltransferase G [Acidithiobacillus
caldus ATCC 51756]
Length = 215
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
V + L + +W++ NL + +H+ DSL + P + +D+GS
Sbjct: 26 VGEAARDGLLDYLAQLQRWNRSHNLTAIRDPHAMVAQHLLDSLALLPHLP-DGLLLDVGS 84
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMI 139
G G PG+ +I G LIE KKA+FLR+V + R V A R++ +
Sbjct: 85 GAGLPGVPLAIVR---SGQDFVLIEPNAKKAAFLRHVHRHLGLVRVVVHAGRVE-NYRPP 140
Query: 140 TTCDVISARALADLDTL 156
+ +RA A L L
Sbjct: 141 EPAAAVLSRATASLARL 157
>gi|237738382|ref|ZP_04568863.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
mortiferum ATCC 9817]
gi|229420262|gb|EEO35309.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium
mortiferum ATCC 9817]
Length = 233
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSI 96
+++ NL + + +H DSL + L + ID+G+G GFPG++ +I +I
Sbjct: 33 EYNSHTNLTAMRDEKLIIEKHFLDSLLLQNLIKWDMKSAIDVGTGAGFPGMVLAIFNENI 92
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA--PQMITTCDVISARALADL 153
L++S KK FL+ V + ++ R ++ + + D+ R ++ L
Sbjct: 93 R---FTLMDSIGKKTKFLQMVKDELGLENVEIVTSRAEDFISDEKRESYDLGLCRGVSKL 149
Query: 154 DTLLEYSFPWLYQK 167
T+LEY P+L ++
Sbjct: 150 STILEYIIPFLKEE 163
>gi|304383179|ref|ZP_07365652.1| 16S rRNA methyltransferase GidB [Prevotella marshii DSM 16973]
gi|304335650|gb|EFM01907.1| 16S rRNA methyltransferase GidB [Prevotella marshii DSM 16973]
Length = 208
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 7/141 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWIDL 78
++ E+ L+ +W+ KIN++S +++ + H+ SL + + + + +DL
Sbjct: 13 LTDRQQEQFAALGSLYPEWNAKINVISRKDIDNLYEHHILHSLAIAKAVMFRAGTSVLDL 72
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+GGGFPGI +I LI+ KK + R E +
Sbjct: 73 GTGGGFPGIPLAILFPD---SRFRLIDGTGKKIRVAAEIASAIGLTNVEAVQRRGEEERE 129
Query: 139 ITTCDVISARALADLDTLLEY 159
+ +RA+ L L+
Sbjct: 130 RFE--FVVSRAVMPLPDLVRL 148
>gi|297618520|ref|YP_003703679.1| methyltransferase GidB [Syntrophothermus lipocalidus DSM 12680]
gi|297146357|gb|ADI03114.1| methyltransferase GidB [Syntrophothermus lipocalidus DSM 12680]
Length = 216
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGFPG 86
KL F L + +K++NLVS + +H ED L + + D+GSGGG PG
Sbjct: 6 KLRRFQELLERENKRVNLVSKQMSREELEKHFEDCLEFARYWDATGKLVADIGSGGGLPG 65
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQ---MITTC 142
++ +I S G LIE+ +KK++FL ++ V R++ +
Sbjct: 66 MVLAIVFSE---GKFCLIEADSKKSAFLTMAGRELNLPNVSVITERVEAIGRDDGFRAMF 122
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D + RA+A L+ L+EY P L +
Sbjct: 123 DFVLVRAVARLNVLVEYGLPLLKR 146
>gi|84497200|ref|ZP_00996022.1| glucose-inhibited division protein B [Janibacter sp. HTCC2649]
gi|84382088|gb|EAP97970.1| glucose-inhibited division protein B [Janibacter sp. HTCC2649]
Length = 230
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 5/163 (3%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
D+ L V R+ + F + L+ V W RHV +
Sbjct: 5 EADATGALSTAAPSGAAVVFRDRMPAATRFVEILADTGVTHGLIGPREVPRLWERHVLNC 64
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P ++ ID+GSG G PG+ +I ++ ++L+E ++ +L V
Sbjct: 65 AVIEDAFPESAMLIDVGSGAGLPGVALAIARPDLD---IHLVEPMQRRTDWLTTTVTDLG 121
Query: 123 ARGKVFA-CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
R +E ++ + ++ARA+A + L + P L
Sbjct: 122 LDNVTVHRGRAEEFIGVL-SAPWVTARAVARIAKLARWCVPLL 163
>gi|165932647|ref|YP_001649436.1| 16S rRNA methyltransferase GidB [Rickettsia rickettsii str. Iowa]
gi|189040816|sp|B0BW04|RSMG_RICRO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|165907734|gb|ABY72030.1| methyltransferase [Rickettsia rickettsii str. Iowa]
Length = 192
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 3 EVPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDI 62
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG G PGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 63 GSGAGLPGIVLSIAG----VAQVSLIEADLRKCIFLEKASKISNNNVQIINQRIEKVE-- 116
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 117 -IDCSILTCRAFSNLNTI 133
>gi|85709800|ref|ZP_01040865.1| glucose inhibited division protein B [Erythrobacter sp. NAP1]
gi|85688510|gb|EAQ28514.1| glucose inhibited division protein B [Erythrobacter sp. NAP1]
Length = 213
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-------YPSI 74
+ +L + L L +++ NL+S + E W RH+ DS ++ + P P
Sbjct: 22 DDRAVGRLHEYAGLLLAENQQQNLISKPSEEQLWERHIADSAQLLEHVPRETYGDGAPGP 81
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
W+DLG+G G PG++ +I I+ V L+ES+ ++ FL V + + ++ R++
Sbjct: 82 WLDLGTGPGLPGLVIAILCPKID---VVLVESRGRRVEFLEDCVTRLGLKNCRIEGQRLE 138
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPW 163
+ VISARA A LD L+ S P+
Sbjct: 139 RVSPFESW--VISARAFASLDKLIALSAPF 166
>gi|159045996|ref|YP_001534790.1| methyltransferase GidB [Dinoroseobacter shibae DFL 12]
gi|189039385|sp|A8LPC4|RSMG_DINSH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157913756|gb|ABV95189.1| methyltransferase GidB [Dinoroseobacter shibae DFL 12]
Length = 195
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGI 87
L+ F L KWS +INLV+ ST + W RH+ DS +++ P IDLGSGGG P +
Sbjct: 9 LKVFERLIRKWSPRINLVAPSTYDQTWERHILDSAQLYDFLPSTADKVIDLGSGGGLPVV 68
Query: 88 ITSIQLSSIE-GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ + IES +K +FLR ++ V RI+ A + +VI+
Sbjct: 69 VLGVLAKHRGCRIKFTAIESDARKCAFLRTAARELQINLSVITSRIEAA--NVEPGNVIT 126
Query: 147 ARALADLDTLLEYSFPW 163
ARALA + LLE++ P
Sbjct: 127 ARALAPVSKLLEFAEPL 143
>gi|157827959|ref|YP_001494201.1| 16S rRNA methyltransferase GidB [Rickettsia rickettsii str. 'Sheila
Smith']
gi|166224609|sp|A8GQL8|RSMG_RICRS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157800440|gb|ABV75693.1| glucose-inhibited division protein B [Rickettsia rickettsii str.
'Sheila Smith']
Length = 191
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 2 EVPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG G PGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 62 GSGAGLPGIVLSIAG----VAQVSLIEADLRKCIFLEKASKISNNNVQIINQRIEKVE-- 115
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 116 -IDCSILTCRAFSNLNTI 132
>gi|218297061|ref|ZP_03497738.1| methyltransferase GidB [Thermus aquaticus Y51MC23]
gi|218242616|gb|EED09153.1| methyltransferase GidB [Thermus aquaticus Y51MC23]
Length = 242
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
+ +L ++S L+ Y L L+ ++K +L + T + +H DSL
Sbjct: 6 EGERLLLEGGRALGLDLSPH-LKAFSTLYDLLLEGNRKASLTALRTEREVVAKHFLDSLT 64
Query: 65 VFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ L P +DLG+G GFPG+ I +E V L+++ KK +FL VV
Sbjct: 65 LLLLPLWEGPLRVLDLGTGAGFPGLPLKIVRPELE---VVLLDATRKKVAFLEEVVAALG 121
Query: 123 ARGK-VFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWL 164
+G R +E P+ ++ARA+A L L E P+L
Sbjct: 122 LKGAFPLWGRAEEVAHLPEHREAYQRVTARAVAHLCVLAELGLPFL 167
>gi|87309120|ref|ZP_01091257.1| probable glucose inhibited division protein B (GidB)
[Blastopirellula marina DSM 3645]
gi|87288111|gb|EAQ80008.1| probable glucose inhibited division protein B (GidB)
[Blastopirellula marina DSM 3645]
Length = 228
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 4/155 (2%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ L+ + + + L+ + + + ++ +NL + + F R V DSL +
Sbjct: 16 ATLQEALTAHGAPLDDAIVAALDKYAQIVWEMNQSLNLTRHTDYDKFVARDVLDSLALAG 75
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+DLGSGGG PG+I +I ++ V+L +S KKA L +V + V
Sbjct: 76 QLKPGDEILDLGSGGGVPGVIIAILRPDVQ---VSLCDSVTKKAKALEEIVHRAGLSIPV 132
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ R ++ + I RA+A L LL + P
Sbjct: 133 YHARAEDLLEDF-RYHAIVCRAVAPLKKLLTWLAP 166
>gi|118462827|ref|YP_884418.1| 16S rRNA methyltransferase GidB [Mycobacterium avium 104]
gi|189045860|sp|A0QND0|RSMG_MYCA1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118164114|gb|ABK65011.1| methyltransferase GidB [Mycobacterium avium 104]
Length = 245
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + L+ V+ W RH+ +S V L ID+GSG G PGI
Sbjct: 41 QRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVAGLLGRGDRIIDIGSGAGLPGIPL 100
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITTCDVISA 147
+I +E L+ +++ FL VV + +V R +E P D +
Sbjct: 101 AIARPDLEVVLLE---PLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRNRFGDRDAAVS 157
Query: 148 RALADLDTLLEYSFPWLY 165
RA+A LD L ++S P L
Sbjct: 158 RAVAALDKLTKWSMPLLR 175
>gi|42561430|ref|NP_975881.1| glucose-inhibited division protein B [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|81618795|sp|Q6MS67|RSMG_MYCMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|42492928|emb|CAE77523.1| glucose-inhibited division protein B [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|301320699|gb|ADK69342.1| 16S rRNA methyltransferase GidB [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 137
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIW 75
+ +++E KL+ +Y + ++ ++K NL + + + + +H DSL V Q
Sbjct: 12 KNFTINQEIKNKLDLYYQILIQENQKYNLTRITELNEVFEKHFLDSLLFVEQFQIIDQKI 71
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+G+G GFPGI+ I +I+ + LIES NKKA+FL+Y+VQK ++ R +E
Sbjct: 72 ADIGTGAGFPGIVLKIFFPNIK---LTLIESNNKKANFLKYLVQKLELNNVEILNKRAEE 128
Query: 135 APQMIT 140
+
Sbjct: 129 LNEYKE 134
>gi|256028337|ref|ZP_05442171.1| glucose inhibited division protein B [Fusobacterium sp. D11]
gi|289766263|ref|ZP_06525641.1| glucose inhibited division protein B [Fusobacterium sp. D11]
gi|289717818|gb|EFD81830.1| glucose inhibited division protein B [Fusobacterium sp. D11]
Length = 232
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKEED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + +V R
Sbjct: 69 ETLIDIGTGAGFPGMMLAIFNEDKK---FTLLDSVRKKTDFLELVKSELGLNNIEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|108759077|ref|YP_635596.1| methyltransferase GidB [Myxococcus xanthus DK 1622]
gi|123073866|sp|Q1CVH7|RSMG_MYXXD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108462957|gb|ABF88142.1| methyltransferase GidB [Myxococcus xanthus DK 1622]
Length = 217
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M L A V+ + +L+ LKW+ K+NL + + E+ +H
Sbjct: 1 MDNARFEDQLAAGCRALGVTVAADLGPRLQRLMSELLKWNAKVNLTAITAPEEVLEKHFL 60
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL V + +DLG+G GFPG+ + + V L+++ KK +F++
Sbjct: 61 DSLAVLPEVTGAATLLDLGAGAGFPGLPLKLA---LPALGVTLVDTVGKKVAFIKAAAAS 117
Query: 121 TAARG-KVFACRIQEAPQMIT--TCDVISARALADLDTLLEYS 160
+G + R + P+ +V+ ARA DL L +
Sbjct: 118 LGLQGVRGLHARAEGQPETEGIPRAEVLIARAFMDLPDWLALA 160
>gi|229816991|ref|ZP_04447273.1| hypothetical protein BIFANG_02246 [Bifidobacterium angulatum DSM
20098]
gi|229785736|gb|EEP21850.1| hypothetical protein BIFANG_02246 [Bifidobacterium angulatum DSM
20098]
Length = 222
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 16/161 (9%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------S 73
+V + L LE F+ + + L+ V+ W RH+ +S +
Sbjct: 13 DVLGDALPMLEVFHAKLEREGEPRGLIGPRDVDIIWERHILNSAAIVPFIREATDGMRFK 72
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
D+GSGGGFPGI+ + L E LIE ++ +L V + + R
Sbjct: 73 TVADVGSGGGFPGIVAAACLPDHE---FTLIEPMERRVEWLEECVNEMGLENVTIIRARS 129
Query: 133 QEA------PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+E + V++ RA+A + L ++ P L +
Sbjct: 130 EEVITSLRKDRSKHPYAVVTCRAVAPMTKLSGWTLPLLKPQ 170
>gi|262204657|ref|YP_003275865.1| methyltransferase GidB [Gordonia bronchialis DSM 43247]
gi|262088004|gb|ACY23972.1| methyltransferase GidB [Gordonia bronchialis DSM 43247]
Length = 205
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ + + L+ V W RH+ + + ++ +D+GSG G PG+
Sbjct: 3 EVYHRILATDGIEHGLLGPREVPRLWDRHILNCAVIGEVIDDGESVVDIGSGAGLPGVAL 62
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE--APQMITTCDVIS 146
+I ++ V L+E ++++FL V + V R +E + CDV +
Sbjct: 63 AIARPDLD---VVLLEPLLRRSAFLERAVAELGLSSVTVVRGRAEEKSIRTAVGQCDVAT 119
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L L +S P +
Sbjct: 120 SRAVAPLQRLCTWSAPLIR 138
>gi|118620074|ref|YP_908406.1| glucose-inhibited division protein B Gid [Mycobacterium ulcerans
Agy99]
gi|193806449|sp|A0PX66|RSMG_MYCUA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118572184|gb|ABL06935.1| glucose-inhibited division protein B Gid [Mycobacterium ulcerans
Agy99]
Length = 170
Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
LE + + + L+ V+ W RHV +S + +L + +D+GSG G P
Sbjct: 17 LELAQCYADWLGTAGVERGLLGPREVDRLWERHVLNSAVIGELLDHGERVVDIGSGAGLP 76
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCD 143
+ +I ++ V L+E ++ FL+ VV +V R +E + + D
Sbjct: 77 ALPLAIARHDLQ---VVLLEPMLRRVEFLQEVVTDLGLAVEVVRGRAEERSVRERLGGSD 133
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
+RA+A LD L ++S P L ++
Sbjct: 134 AAVSRAVAALDKLAKWSMPLLKRE 157
>gi|33598995|ref|NP_886555.1| glucose inhibited division protein B [Bordetella bronchiseptica
RB50]
gi|55976493|sp|Q7WRF0|RSMG_BORBR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33575041|emb|CAE30504.1| glucose inhibited division protein B [Bordetella bronchiseptica
RB50]
Length = 210
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 19/159 (11%)
Query: 11 RANYLLNTYNVSRE--TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
R + + + +KL + +W++ NL + ++H+ DSL V
Sbjct: 14 RLAQACDALRLPADAGQQQKLLRYIEQMQRWNRTYNLTAIRDPGQMLVQHLFDSLSVVAP 73
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
G PG++ +I + + V +++ KK +F+R + +
Sbjct: 74 LER-----------GLPGVVLAIMRAHWD---VTCVDAVEKKTAFVRQMAGALGLPNLQA 119
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
RI++ CDV+ +RA A L + + + +
Sbjct: 120 AHTRIEQLE--PAQCDVVISRAFASLQDFAKLAGRHVRE 156
>gi|220904019|ref|YP_002479331.1| glucose inhibited division protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868318|gb|ACL48653.1| glucose inhibited division protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 232
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-----PYP 72
+V +E LE L + + +W+K +NLV + ++ R V DS + P
Sbjct: 19 GADVPQEALEPLGIYLEMLCQWNKAMNLVGPHSWQNMLTRLVADSFHLAPFLSGLPMPAA 78
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ DLG+G G PGI + G ++E + K+A FL V+ +T VF
Sbjct: 79 PLTWDLGAGAGLPGIPLRMLWPD---GSYYMVEVREKRALFLSSVLSRTHLPCTHVFRGP 135
Query: 132 IQEAPQ-MITTCDVISARALADLDTLLEYSFPWLYQK 167
++ Q D I +RA LL+ + P L ++
Sbjct: 136 VEHFFQGQYYQADCIVSRAFMPWRQLLDLTLPRLRRE 172
>gi|325677529|ref|ZP_08157193.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
gi|325551776|gb|EGD21474.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
Length = 226
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ L+ V W RHV + + +L +D+GSG G PG+
Sbjct: 29 EAYHASLASDGVVRGLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE--APQMITTCDVIS 146
+I + V L+E +++ +L+ +V +V R +E + + DV++
Sbjct: 89 AIARPDVR---VTLVEPLLRRSVYLQEIVDSIGLDNVRVVRGRAEEPDVVKEVGGADVVT 145
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L+ L +S P +
Sbjct: 146 SRAVAPLEKLARWSLPLVR 164
>gi|296284829|ref|ZP_06862827.1| glucose inhibited division protein B [Citromicrobium bathyomarinum
JL354]
Length = 213
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLG 79
S KLE F ++ NL+S ST++ W RHV DS ++ P P W+D+G
Sbjct: 18 SDAAFAKLEQFVAELRIEAEHQNLISRSTIDSVWQRHVADSAQLLDHVPRETPGTWLDIG 77
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQM 138
+G GFPGI+T+I + L E + K+ ++L +V +V R+++
Sbjct: 78 TGAGFPGIVTAIMRPDLPH---VLCEPRAKRVTWLERMVTLAKLGNCRVAGSRVEKVETF 134
Query: 139 ITTCDVISARALADLDTLLEYSFPW 163
DVISARA A L L+ S +
Sbjct: 135 A--ADVISARACASLKDLISLSARF 157
>gi|319788431|ref|YP_004147906.1| methyltransferase GidB [Pseudoxanthomonas suwonensis 11-1]
gi|317466943|gb|ADV28675.1| methyltransferase GidB [Pseudoxanthomonas suwonensis 11-1]
Length = 212
Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W++ NL + E+ RH+ DSL + P DLG+G G PGI +I ++
Sbjct: 39 RWNRTYNLTAIRDPEEMVTRHLLDSLAMHPYV-RPGALADLGTGPGLPGIPLAIARPDVQ 97
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTL 156
V L+ES KKA FLR V++ +V R + + I+ARAL L +
Sbjct: 98 ---VTLVESNGKKARFLREAVRQLKLGNARVLESRAEAVAEP-GAYAQITARALDTLAGI 153
Query: 157 LE 158
LE
Sbjct: 154 LE 155
>gi|16331741|ref|NP_442469.1| 16S rRNA methyltransferase GidB [Synechocystis sp. PCC 6803]
gi|3122154|sp|Q55787|RSMG_SYNY3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1001702|dbj|BAA10539.1| glucose inhibited division protein B [Synechocystis sp. PCC 6803]
Length = 264
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-----S 73
+ E +E + Y L + ++NL + DF +H+ DSL L + +
Sbjct: 35 WQPDGEQIEAMVKLYQGVLVGNARLNLTRITAPLDFLEKHLWDSLAGVLLSDHSRNCPQA 94
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
ID+G+GGGFPG+ ++ V L++S +KK ++L + + + R
Sbjct: 95 RVIDIGTGGGFPGLPVALVWPQW---SVALLDSTHKKINYLEELGHRLGLANLAYLVARA 151
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ PQ + D+ RA+ + EY+ P +
Sbjct: 152 EAVGNQPQHRSQYDLALIRAVGEGVVCAEYALPLVK 187
>gi|315420679|gb|ADU15872.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L+++S P +
Sbjct: 137 RAVAALDKLMKWSMPLIRP 155
>gi|19705043|ref|NP_602538.1| glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|22095723|sp|Q8RI89|RSMG_FUSNN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|19712959|gb|AAL93837.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 232
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKMEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG+I +I + L++S KK FL V + A +V R
Sbjct: 69 KTLIDIGTGAGFPGMILAIFNEDKK---FTLLDSVRKKTDFLELVKNELALNNVEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|237739896|ref|ZP_04570377.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
2_1_31]
gi|229423504|gb|EEO38551.1| ribosomal RNA small subunit methyltransferase G [Fusobacterium sp.
2_1_31]
Length = 232
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKIEKALKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKEED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I L++S KK FL V + A ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKN---FTLLDSVRKKTDFLELVKNELALNNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDKREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|296329305|ref|ZP_06871806.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296153661|gb|EFG94478.1| 16S rRNA methyltransferase GidB [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 232
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKMEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG+I +I + L++S KK FL V + A +V R
Sbjct: 69 KTLIDIGTGAGFPGMILAIFNEDKK---FTLLDSVRKKTDFLELVKNELALNNVEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|171920818|ref|ZP_02931995.1| methyltransferase GidB [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|185178850|ref|ZP_02964631.1| methyltransferase GidB [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188024382|ref|ZP_02997048.1| methyltransferase GidB [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188518462|ref|ZP_03003949.1| methyltransferase GidB [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|188524181|ref|ZP_03004245.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867429|ref|ZP_03079433.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273257|ref|ZP_03205793.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209554410|ref|YP_002284457.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225550480|ref|ZP_03771429.1| methyltransferase GidB [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|225551429|ref|ZP_03772375.1| methyltransferase GidB [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|171903586|gb|EDT49875.1| methyltransferase GidB [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|184209486|gb|EDU06529.1| methyltransferase GidB [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188018650|gb|EDU56690.1| methyltransferase GidB [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188998134|gb|EDU67231.1| methyltransferase GidB [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|195659979|gb|EDX53359.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660905|gb|EDX54158.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249777|gb|EDY74557.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209541911|gb|ACI60140.1| 16S rRNA methyltransferase GidB [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225379244|gb|EEH01609.1| methyltransferase GidB [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|225379634|gb|EEH01996.1| methyltransferase GidB [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 236
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIW 75
V +T E + + K+++ NL + + + DSL ++ +
Sbjct: 17 VDEQTFISFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQE 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ + R ++
Sbjct: 77 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 133
Query: 135 APQ-MITTCDVISARALADLDTLLEYSFPWLY 165
Q M + DV ++RA+A LD +LE S ++
Sbjct: 134 LTQSMRESFDVATSRAVASLDKILEISAAFVK 165
>gi|171920429|ref|ZP_02931744.1| methyltransferase GidB [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186701591|ref|ZP_02971303.1| methyltransferase GidB [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|171902876|gb|EDT49165.1| methyltransferase GidB [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|186700819|gb|EDU19101.1| methyltransferase GidB [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 236
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIW 75
V +T E + + K+++ NL + + + DSL ++ +
Sbjct: 17 VDEQTFLLFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQE 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ + R ++
Sbjct: 77 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 133
Query: 135 APQ-MITTCDVISARALADLDTLLEYSFPWLY 165
Q M + DV ++RA+A LD +LE S ++
Sbjct: 134 LTQSMRESFDVATSRAVASLDKILEISAAFVK 165
>gi|310288300|ref|YP_003939559.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum S17]
gi|309252237|gb|ADO53985.1| Methyltransferase GidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum S17]
Length = 232
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 17/158 (10%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWID 77
E +KLE F+ + + L+ + W RH+ +S D
Sbjct: 26 EAYDKLEVFHVKLSREGELRGLIGPRDISIIWERHILNSAACVPFIREVTDRSKAKTIAD 85
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--------FA 129
+GSGGGFPGI+ + + E LIE ++ +L+ V +
Sbjct: 86 VGSGGGFPGIVAAACMPDCE---FTLIEPMERRVEWLQECVDDMDLQNVTIIRARSDEVI 142
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
RI+ + V++ RA+A + L ++ P L +
Sbjct: 143 DRIKHHEGELKPFSVVTCRAVAPMTKLAGWTLPLLRPQ 180
>gi|224283946|ref|ZP_03647268.1| glucose-inhibited division protein B [Bifidobacterium bifidum NCIMB
41171]
gi|313141098|ref|ZP_07803291.1| methyltransferase gidB [Bifidobacterium bifidum NCIMB 41171]
gi|313133608|gb|EFR51225.1| methyltransferase gidB [Bifidobacterium bifidum NCIMB 41171]
Length = 232
Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 21/182 (11%)
Query: 4 CDSNSILRANYLLNTYNVSRETL----EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV 59
D S + L+ + RETL +KLE F+ + + L+ + W RH+
Sbjct: 2 SDIVSRETSGDELDDSAIVRETLGEAYDKLEVFHVKLSREGELRGLIGPRDISIIWERHI 61
Query: 60 EDSLRVFQLHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+S D+GSGGGFPGI+ + + LIE ++ +
Sbjct: 62 LNSAACVPFIREVTDRSKAKTIADVGSGGGFPGIVAAACMPDC---AFTLIEPMERRVEW 118
Query: 114 LRYVVQKTAARGKV--------FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
L+ V + RI+ + +++ RA+A + L ++ P L
Sbjct: 119 LQECVDDMDLQNVTIIRARSDEVIDRIKHHEGELKPFSIVTCRAVAPMTKLAGWTLPLLR 178
Query: 166 QK 167
+
Sbjct: 179 PQ 180
>gi|294102832|ref|YP_003554690.1| methyltransferase GidB [Aminobacterium colombiense DSM 12261]
gi|293617812|gb|ADE57966.1| methyltransferase GidB [Aminobacterium colombiense DSM 12261]
Length = 229
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 5/149 (3%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
++ + LE + + +S ++ L E W H+ D L L P ID+G
Sbjct: 12 EIAEHNRKALETYIDGLVSFSGRVRLTGPQDRETLWSEHILDCLYSVPLLPQEGDIIDVG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQ 137
+GGG PG++ +I + + L++S KK L + + + R +E A
Sbjct: 72 TGGGLPGMVWAICRPDLH---ITLLDSVKKKCVALEELSGLLHLKNVTIICSRAEEFALS 128
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
T + ARA+ LLEY P++ Q
Sbjct: 129 RRETFSLAGARAVKGAGVLLEYLSPFVAQ 157
>gi|297243214|ref|ZP_06927149.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis AMD]
gi|296888748|gb|EFH27485.1| S-adenosylmethionine-dependent methyltransferase [Gardnerella
vaginalis AMD]
Length = 236
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWID 77
E LEK + F+ + L+ + W RH+ +S V D
Sbjct: 32 EALEKCKLFHVKLQQEGLVRGLIGPRDMNILWERHILNSAAVVPFIKEAVVGRKNKRVAD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGGFPG++ + L + V LIE ++ +L V + +F R E
Sbjct: 92 VGSGGGFPGLVLAACLPDYD---VTLIEPMERRVDWLCECVALMKLKNVTIFHGRSDEVI 148
Query: 137 QMITT-----CDVISARALADLDTLLEYSFPWLYQ 166
I + DV++ RA+A + L ++ P L +
Sbjct: 149 DKIKSHEIPAFDVVTCRAVAPMTKLAGWTIPLLNK 183
>gi|215405977|ref|ZP_03418158.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
02_1987]
gi|215448266|ref|ZP_03435018.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T85]
gi|289747763|ref|ZP_06507141.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 02_1987]
gi|289760092|ref|ZP_06519470.1| ribosomal RNA small subunit methyltransferase G [Mycobacterium
tuberculosis T85]
gi|294995601|ref|ZP_06801292.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis 210]
gi|289688291|gb|EFD55779.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 02_1987]
gi|289715656|gb|EFD79668.1| ribosomal RNA small subunit methyltransferase G [Mycobacterium
tuberculosis T85]
gi|326905752|gb|EGE52685.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis W-148]
Length = 224
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L++ ++ FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLDPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|170762322|ref|YP_001752119.1| methyltransferase GidB [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|183508528|ref|ZP_02958052.1| methyltransferase GidB [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|189040729|sp|B1AI25|RSMG_UREP2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|168827899|gb|ACA33161.1| methyltransferase GidB [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|182675965|gb|EDT87870.1| methyltransferase GidB [Ureaplasma parvum serovar 14 str. ATCC
33697]
Length = 236
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIW 75
V +T E + + K+++ NL + + + DSL ++ +
Sbjct: 17 VDEQTFMSFEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKL 76
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQE 134
ID+GSG G PG++ I ++ + L+E+ K+ FL+ + Q+ + R ++
Sbjct: 77 IDIGSGSGIPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAED 133
Query: 135 APQ-MITTCDVISARALADLDTLLEYSFPWLY 165
Q M + D+ ++RA+A LD +LE S ++
Sbjct: 134 LTQSMRESFDIATSRAVASLDKILEISAAFVK 165
>gi|315420677|gb|ADU15871.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|85861012|ref|YP_463214.1| methyltransferase [Syntrophus aciditrophicus SB]
gi|123517892|sp|Q2LY85|RSMG_SYNAS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85724103|gb|ABC79046.1| methyltransferase [Syntrophus aciditrophicus SB]
Length = 241
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSST-VEDFWIRHVEDSLRVFQLHPYP-SIWIDL 78
+S L + +Y W+ +INL++S+ V D I+H DSL + P+P ID+
Sbjct: 36 LSDAQLNRFLMYYRELKFWNSRINLIASAESVTDIVIKHFLDSLTLIPCIPFPDGRLIDI 95
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
G+GGGFPGI I L+S++ V L+E+ KK SFL+ + + + K+ R+++
Sbjct: 96 GTGGGFPGIPLKIALNSLK---VTLLEASRKKVSFLKSLRRVLNLQDMKILNERVEDLIT 152
Query: 136 -PQMITTCDVISARALADLDTLLEY 159
D++ +RA L L +
Sbjct: 153 QAPCPNRFDMVVSRAALKLPEYLRF 177
>gi|219110659|ref|XP_002177081.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411616|gb|EEC51544.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 346
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 14/171 (8%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDS 62
D S + ++N +S E+L + W+ +INLVS V + RHV S
Sbjct: 76 DPASDQARDIVMNDLKLSGAQHEQLVSLCQAVVDWNDRINLVSRKDCTVATVFGRHVLPS 135
Query: 63 LRVFQLHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ +D+G+GGGFPG+ +I ++ L++S KK + +
Sbjct: 136 IACCAFSEDQNPLNTAKTLVDVGTGGGFPGLPLAIAYPDVQ---FVLLDSVGKKLTAAQD 192
Query: 117 VVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + R ++ DV + R+++ + + +
Sbjct: 193 MANALGLDHVRTHHGRAEDLRD--EVFDVATGRSVSAIPQFCAWMQHLVKP 241
>gi|218755711|ref|ZP_03534507.1| glucose-inhibited division protein B [Mycobacterium tuberculosis GM
1503]
gi|289764110|ref|ZP_06523488.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis GM 1503]
gi|297636606|ref|ZP_06954386.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis KZN
4207]
gi|289711616|gb|EFD75632.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis GM 1503]
gi|315420683|gb|ADU15874.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
gi|328460697|gb|AEB06120.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis KZN 4207]
Length = 224
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|218670489|ref|ZP_03520160.1| glucose-inhibited division protein B [Rhizobium etli GR56]
Length = 156
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 57/105 (54%), Positives = 80/105 (76%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++FQ++P P W+DLGSGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T A
Sbjct: 2 QIFQIYPEPVRWVDLGSGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNA 61
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
RG V A RI++A I CD ISARALADLD L+ Y+ PW+ K+
Sbjct: 62 RGSVHAIRIEDAHAEIGECDAISARALADLDGLIGYAAPWMLGKE 106
>gi|114568074|ref|YP_755228.1| methyltransferase GidB [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317085|sp|Q0ATU7|RSMG_SYNWW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114339009|gb|ABI69857.1| methyltransferase GidB [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 214
Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDLGSGGGFPGIIT 89
F + ++ + + NLVS ++ +H+EDS + S +D+GSG GFPG++
Sbjct: 7 TFKEMLIEENSRHNLVSRKSLPVELEKHIEDSRSLLNFMDLKGSRVVDIGSGAGFPGLVL 66
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVIS 146
+I G L+ES KK FL+ V+ + + +V RI+E ++ + D S
Sbjct: 67 AIYCPE---GEFLLLESDLKKTEFLQAVINRCGLKNCQVLRKRIEEVGRSELRNSFDFCS 123
Query: 147 ARALADLDTLLEY 159
RALA ++ +LEY
Sbjct: 124 CRALAMMNIVLEY 136
>gi|152993652|ref|YP_001359373.1| 16S rRNA methyltransferase GidB [Sulfurovum sp. NBC37-1]
gi|189040726|sp|A6QC07|RSMG_SULNB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151425513|dbj|BAF73016.1| glucose inhibited division protein B [Sulfurovum sp. NBC37-1]
Length = 193
Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ + KLE F L +W++ NL + +V + + DSL P +D+G+
Sbjct: 11 LDDGIIGKLEGFAVLLHEWNQVHNLTGARSVVAIYDN-IVDSLYPLTFIRIPKTLLDVGT 69
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI 139
G GFPG++ +I L E V L E K+ SFL+Y + V A R++ +
Sbjct: 70 GAGFPGLVLAIALPETE---VVLAEPLKKRVSFLKYAAIDLGLKNVTVEAKRVENV--VY 124
Query: 140 TTCDVISARALADLDTLLEYS 160
D+IS+RA+ + LL+ +
Sbjct: 125 EAFDMISSRAVTNTKLLLDLT 145
>gi|309811325|ref|ZP_07705112.1| 16S rRNA methyltransferase GidB [Dermacoccus sp. Ellin185]
gi|308434632|gb|EFP58477.1| 16S rRNA methyltransferase GidB [Dermacoccus sp. Ellin185]
Length = 255
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L+ V W RHV + V + D+G+G G PG++ +
Sbjct: 41 RYVDALCDTGVSHGLMGPREVPRMWERHVLNCAVVHPGIARGAHVADIGAGAGLPGLVLA 100
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARA 149
I + + L+E ++ ++L VV++ +V R E T DV+++RA
Sbjct: 101 IARPDL---TMTLVEPLLRRTTWLADVVEELDLPNVEVVRARADELWGQR-TFDVVTSRA 156
Query: 150 LADLDTLLEYSFPWLYQ 166
+A + L +S P + +
Sbjct: 157 VARIGELARWSLPLVSR 173
>gi|32266985|ref|NP_861017.1| 16S rRNA methyltransferase GidB [Helicobacter hepaticus ATCC 51449]
gi|55976489|sp|Q7VG38|RSMG_HELHP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|32263037|gb|AAP78083.1| glucose inhibited division protein B [Helicobacter hepaticus ATCC
51449]
Length = 185
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
F LKW+K NL +S++E + DSL + + +D+GSGGGFP I
Sbjct: 10 FTIFGDELLKWNKIHNLTGASSIESVMEN-IFDSLYPLRFIDDFTSCMDIGSGGGFPAIP 68
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP-QMITTCDVIS 146
+I LIE +NK++ FL+ ++ + V RIQ+ P + D+I+
Sbjct: 69 LAIAKPQSH---FILIEPRNKRSCFLQNIIIQLELNNVQVRPIRIQDVPIAEVNNLDLIT 125
Query: 147 ARALADLDTLLEYSFPWLYQK 167
+RAL D L+ S +L +
Sbjct: 126 SRALMDAKELISLSRKFLKSE 146
>gi|311065161|ref|YP_003971887.1| methyltransferase GidB [Bifidobacterium bifidum PRL2010]
gi|310867481|gb|ADP36850.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium bifidum PRL2010]
Length = 232
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 17/158 (10%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWID 77
E +KLE F+ + + L+ + W RH+ +S D
Sbjct: 26 EAYDKLEVFHVKLSREGELRGLIGPRDISIIWERHILNSAACVPFIREVADRSKAKTIAD 85
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--------FA 129
+GSGGGFPGI+ + + + LIE ++ +L+ V +
Sbjct: 86 VGSGGGFPGIVAATCMPDC---VFTLIEPMERRVEWLQECVDDMDLQNVTIIRARSDEVI 142
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
RI+ + V++ RA+A + L ++ P L +
Sbjct: 143 DRIKHHEGELKPFSVVTCRAVAPMTKLAGWTLPLLRPQ 180
>gi|15843553|ref|NP_338590.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis
CDC1551]
gi|31795092|ref|NP_857585.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis AF2122/97]
gi|121635905|ref|YP_976128.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|121639830|ref|YP_980054.1| 16S rRNA methyltransferase GidB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148663786|ref|YP_001285309.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis H37Ra]
gi|167969457|ref|ZP_02551734.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
H37Ra]
gi|215413847|ref|ZP_03422512.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
94_M4241A]
gi|215425181|ref|ZP_03423100.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T92]
gi|215432900|ref|ZP_03430819.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
EAS054]
gi|219555766|ref|ZP_03534842.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
T17]
gi|224992325|ref|YP_002647015.1| glucose-inhibited division protein B [Mycobacterium bovis BCG str.
Tokyo 172]
gi|254233401|ref|ZP_04926727.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis C]
gi|254366455|ref|ZP_04982499.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis str. Haarlem]
gi|260184848|ref|ZP_05762322.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis CPHL_A]
gi|260198979|ref|ZP_05766470.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|260203132|ref|ZP_05770623.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis K85]
gi|289441362|ref|ZP_06431106.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|289445520|ref|ZP_06435264.1| chromosome partitioning protein parA [Mycobacterium tuberculosis
CPHL_A]
gi|289567876|ref|ZP_06448103.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T17]
gi|289572571|ref|ZP_06452798.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis K85]
gi|289748457|ref|ZP_06507835.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T92]
gi|289756054|ref|ZP_06515432.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis EAS054]
gi|298527391|ref|ZP_07014800.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 94_M4241A]
gi|306778283|ref|ZP_07416620.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu001]
gi|306778813|ref|ZP_07417150.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu002]
gi|306786840|ref|ZP_07425162.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu003]
gi|306786969|ref|ZP_07425291.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu004]
gi|306791524|ref|ZP_07429826.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu005]
gi|306795589|ref|ZP_07433891.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu006]
gi|306801564|ref|ZP_07438232.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu008]
gi|306805773|ref|ZP_07442441.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu007]
gi|306970170|ref|ZP_07482831.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu009]
gi|306974402|ref|ZP_07487063.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu010]
gi|307082110|ref|ZP_07491280.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu011]
gi|307086721|ref|ZP_07495834.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu012]
gi|38257378|sp|P59964|RSMG_MYCBO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045861|sp|A1KEG3|RSMG_MYCBP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|189045866|sp|A5U9P7|RSMG_MYCTA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|13883931|gb|AAK48404.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
CDC1551]
gi|31620690|emb|CAD96136.1| PROBABLE GLUCOSE-INHIBITED DIVISION PROTEIN B GID [Mycobacterium
bovis AF2122/97]
gi|121491552|emb|CAL70009.1| Probable glucose-inhibited division protein B GID [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|121495478|emb|CAL73967.1| Probable glucose-inhibited division protein B gid [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124603194|gb|EAY61469.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis C]
gi|134151967|gb|EBA44012.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis str. Haarlem]
gi|148507938|gb|ABQ75747.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
H37Ra]
gi|224775441|dbj|BAH28247.1| glucose-inhibited division protein B [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289414281|gb|EFD11521.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis T46]
gi|289418478|gb|EFD15679.1| chromosome partitioning protein parA [Mycobacterium tuberculosis
CPHL_A]
gi|289537002|gb|EFD41580.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis K85]
gi|289541629|gb|EFD45278.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T17]
gi|289689044|gb|EFD56473.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis T92]
gi|289696641|gb|EFD64070.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis EAS054]
gi|298497185|gb|EFI32479.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis 94_M4241A]
gi|308213433|gb|EFO72832.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu001]
gi|308328150|gb|EFP17001.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu002]
gi|308328612|gb|EFP17463.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu003]
gi|308336267|gb|EFP25118.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu004]
gi|308339873|gb|EFP28724.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu005]
gi|308343885|gb|EFP32736.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu006]
gi|308347669|gb|EFP36520.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu007]
gi|308351587|gb|EFP40438.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu008]
gi|308352294|gb|EFP41145.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu009]
gi|308356297|gb|EFP45148.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu010]
gi|308360184|gb|EFP49035.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu011]
gi|308363871|gb|EFP52722.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis SUMu012]
gi|315420675|gb|ADU15870.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
gi|323717335|gb|EGB26540.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis CDC1551A]
Length = 224
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|317401628|gb|EFV82254.1| ribosomal RNA small subunit methyltransferase G [Achromobacter
xylosoxidans C54]
Length = 229
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-------PSIWIDLGSGGGFPGII 88
+W++ NL + + ++H+ DSL P+ D+GSGGG PG++
Sbjct: 42 MQRWNRTYNLTAIRDPQQMLVQHLFDSLAAVGPFSEALGAPGTPAKIYDVGSGGGLPGVV 101
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
++ V I++ KK +F+R + A + RI+ C+++++
Sbjct: 102 LAVMRPEW---SVTCIDAVEKKTAFVRQMSGALALPNLQARHARIETLE--PAGCNIVTS 156
Query: 148 RALADLDTLLEYS 160
RA A L+ +
Sbjct: 157 RAFASLEDFAMLA 169
>gi|89898872|ref|YP_521343.1| 16S rRNA methyltransferase GidB [Rhodoferax ferrireducens T118]
gi|122477996|sp|Q21QL4|RSMG_RHOFD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|89343609|gb|ABD67812.1| methyltransferase GidB [Rhodoferax ferrireducens T118]
Length = 224
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 57/166 (34%), Gaps = 20/166 (12%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
LR + + L + L KW++ NL + + H+ DSL V Q
Sbjct: 8 LRGGLADLALVLEDRQIALLLDYLALIQKWTQVYNLTAVREPAEMLTHHLLDSLAVIQPL 67
Query: 70 ---------------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+D+GSG G PG++ +I I V+ +++ KK +F+
Sbjct: 68 RRQLAGLRDQTPDTDTANVRLLDVGSGAGLPGVVIAICCPEI---TVDCVDTVAKKVAFI 124
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R V + VI +RA A L S
Sbjct: 125 RQVAATLKLAN--LHGLHARVESLTGPYRVICSRAFASLADFTRLS 168
>gi|323700146|ref|ZP_08112058.1| glucose inhibited division protein [Desulfovibrio sp. ND132]
gi|323460078|gb|EGB15943.1| glucose inhibited division protein [Desulfovibrio desulfuricans
ND132]
Length = 225
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ +L A L +++ + E L + +KW++K+NLV S + R V DSL +
Sbjct: 8 RDDVLAAARSLGR-DLAPDRAELLAAYLDQLMKWNRKMNLVGPSDWRTVFDRLVVDSLFL 66
Query: 66 FQL-----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
P + +D G+G G PGI + + G L+E + K+A+F++ V+ +
Sbjct: 67 ADFVTGLRLPERPLCLDFGAGAGLPGIPLRVL---WQDGDYWLVEVREKRATFMKSVLGR 123
Query: 121 TAARGK-VFACRIQEAPQ------MITTCDVISARALADLDTLLEYSFPWLYQ 166
VF R ++A T D+I +RA LL++ P L +
Sbjct: 124 LDLPATNVFLGRAEDALDRLSRSGHQATADLILSRAFMPWQKLLDFIHPMLRR 176
>gi|294784743|ref|ZP_06750031.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_27]
gi|294486457|gb|EFG33819.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_27]
Length = 232
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLHNLLKEED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKK---FILLDSVRKKIDFLELVKNELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|117927028|ref|YP_867645.1| methyltransferase GidB [Magnetococcus sp. MC-1]
gi|189045857|sp|A0LE46|RSMG_MAGSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117610784|gb|ABK46239.1| 16S rRNA m(7)G-527 methyltransferase [Magnetococcus sp. MC-1]
Length = 219
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
+Y + + ++ +V + EKL F L W+KKINL+ ST + W RH+ +
Sbjct: 5 RYEIESMLQLVGVDMDVISVDPYSDEKLAEFVSELLLWNKKINLIGKSTEKSIWSRHIAE 64
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + S +D+G+G G PG+ I S ++L+E KK SFL++V
Sbjct: 65 SLILLPYV-QGSTVLDMGTGAGLPGLPLQIV--SGSNIEMHLVEKDQKKVSFLKHVSANL 121
Query: 122 AARG-KVFACRI-QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ +++ + ++ +V+++RALA+++ L+ ++ P L
Sbjct: 122 NLKNIRIYNKQFTEKGFDGAPLVNVVTSRALAEINQLVAWADPCL 166
>gi|15828599|ref|NP_325959.1| glucose-inhibited division protein B [Mycoplasma pulmonis UAB CTIP]
gi|20177898|sp|Q98R82|RSMG_MYCPU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|14089541|emb|CAC13301.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Mycoplasma pulmonis]
Length = 227
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGSG 81
++T +LE F L + +KKINL S + W + +S++ +D+G+G
Sbjct: 13 QKTASRLEQFVKLIEEENKKINLTSF-EGQRLWQEGIYESIKCLEPFVKSNDSLLDIGAG 71
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFP + I ++ + +IES K+ FL V + ++F R++ + I
Sbjct: 72 VGFPSVPFLIVNPEVK---LTIIESNKKRVLFLEKVKKDLNLSFEIFNGRVENFNKEI-H 127
Query: 142 CDVISARALADLDTLLEYSFPW 163
D I+ARALA L+ L+E +
Sbjct: 128 FDFITARALAPLNILMELTINL 149
>gi|293191006|ref|ZP_06609050.1| 16S rRNA methyltransferase GidB [Actinomyces odontolyticus F0309]
gi|292820693|gb|EFF79659.1| 16S rRNA methyltransferase GidB [Actinomyces odontolyticus F0309]
Length = 220
Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPGI 87
+ + + + L+ +E W RH+ +S V P +D+GSG G PGI
Sbjct: 32 AEYARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLDFMPRKDGRQVLDVGSGSGLPGI 91
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + ++ V+L E ++ +L VV+ E + DV++A
Sbjct: 92 VIAACRPELD---VHLAEPMARRVEWLMDVVEDLGLDNVTIHQARAEELRGKGKADVVTA 148
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A++ L+ + +
Sbjct: 149 RAVANMSKLVRMTSKLIAP 167
>gi|294783015|ref|ZP_06748339.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 1_1_41FAA]
gi|294479893|gb|EFG27670.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 1_1_41FAA]
Length = 232
Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKIEKALKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKEED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I L++S KK FL V + +V R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKN---FTLLDSVRKKTDFLELVKSELVLNNVEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|254303503|ref|ZP_04970861.1| glucose-inhibited cell division protein B [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323695|gb|EDK88945.1| glucose-inhibited cell division protein B [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 232
Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L+ VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LDKIKVSYDENKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + A +V R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKK---FTLLDSVRKKTDFLELVKTELALNNVEVINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|315605514|ref|ZP_07880551.1| glucose inhibited division protein B [Actinomyces sp. oral taxon
180 str. F0310]
gi|315312781|gb|EFU60861.1| glucose inhibited division protein B [Actinomyces sp. oral taxon
180 str. F0310]
Length = 220
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPGI 87
+ + + + L+ +E W RH+ +S V + P +D+GSG G PGI
Sbjct: 32 AEYARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLEFMPSKRGRQVLDVGSGSGLPGI 91
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + ++ V+L E ++ +L VV E + DV++A
Sbjct: 92 VIAACRPDLD---VHLAEPMARRVEWLMDVVDDLGLDNVTIHQARAEELRGKGKADVVTA 148
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A++ L+ + +
Sbjct: 149 RAVANMSKLVRMTSKLIAP 167
>gi|154508232|ref|ZP_02043874.1| hypothetical protein ACTODO_00726 [Actinomyces odontolyticus ATCC
17982]
gi|153797866|gb|EDN80286.1| hypothetical protein ACTODO_00726 [Actinomyces odontolyticus ATCC
17982]
Length = 220
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPGI 87
+ + + + L+ +E W RH+ +S V P +D+GSG G PGI
Sbjct: 32 AEYARMLEEEGEIRGLLGPRDMERIWSRHIVNSAAVLDFMPRKDGRQVLDVGSGSGLPGI 91
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + ++ V+L E ++ +L VV+ E + DV++A
Sbjct: 92 VIAACRPELD---VHLAEPMARRVEWLMDVVEDLGLDNVTIHQARAEELRGKGKADVVTA 148
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A++ L+ + +
Sbjct: 149 RAVANMSKLVRMTSKLIAP 167
>gi|148825127|ref|YP_001289881.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
F11]
gi|148723654|gb|ABR08279.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis F11]
Length = 224
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E + FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLHRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|229822694|ref|YP_002884220.1| methyltransferase GidB [Beutenbergia cavernae DSM 12333]
gi|259495490|sp|C5C6N4|RSMG_BEUC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|229568607|gb|ACQ82458.1| methyltransferase GidB [Beutenbergia cavernae DSM 12333]
Length = 212
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
F L + ++ L+ V W+RH+ +S V + P D+G+G G PG++ +
Sbjct: 27 RFGELLAEHGEERGLIGPREVPRLWLRHIVNSAAVARWLPDAGSVADVGTGAGLPGVVLA 86
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ ++ V+L+E ++ ++L + + + ++ARA+
Sbjct: 87 LMRPDLD---VHLVEPMERRVAWLSELRDELDLDNVTLHQVQAQELHGKLKVQAVTARAV 143
Query: 151 ADLDTLLEYSFPWLYQK 167
A L L ++ P L ++
Sbjct: 144 APLGKLARWTLPLLSRR 160
>gi|237742803|ref|ZP_04573284.1| glucose inhibited division protein B [Fusobacterium sp. 4_1_13]
gi|229430451|gb|EEO40663.1| glucose inhibited division protein B [Fusobacterium sp. 4_1_13]
Length = 232
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLHNLLKEED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKK---FILLDSVRKKTDFLELVKNELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|294055675|ref|YP_003549333.1| methyltransferase GidB [Coraliomargarita akajimensis DSM 45221]
gi|293615008|gb|ADE55163.1| methyltransferase GidB [Coraliomargarita akajimensis DSM 45221]
Length = 217
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWID 77
NV T L + L +W++KINL+S +E RH+ L + + +D
Sbjct: 10 NVDDGTWTLLAEWATLLREWNEKINLISRKDIEHLEERHLAHCLVITNHLRLMNGARIMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGGFPG+I +I + L++S KK + + ++ R R A
Sbjct: 70 VGTGGGFPGLIMAICYPQAQ---FTLVDSIGKKIGVVADIAERLGLRN--VEARQCRAES 124
Query: 138 MITTCDVISARALADLDTLLEY 159
+ D I+ RA+ +L +
Sbjct: 125 IRKEFDFITGRAVKNLPEYFSW 146
>gi|257065513|ref|YP_003145185.1| glucose-inhibited division protein B [Slackia heliotrinireducens
DSM 20476]
gi|256793166|gb|ACV23836.1| glucose-inhibited division protein B [Slackia heliotrinireducens
DSM 20476]
Length = 237
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIWI 76
+S + L LK +K +NL T E I H+EDSL +
Sbjct: 14 IEISESQEQLLLADLDAILKVNKTMNLTRIDTYESALILHIEDSLAGLPFINDAPQGRYA 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQE 134
D+G+GGGFPG+ +I L++S KK L VV + + R+++
Sbjct: 74 DIGTGGGFPGVPVAIMT----NRDTLLVDSVQKKVKALMGVVDGLGLNANIEGYPGRVED 129
Query: 135 -APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A M V++ARA++ L +LLE P L +
Sbjct: 130 LAKDMPGKFAVVTARAVSSLASLLELVSPLLKK 162
>gi|313765039|gb|EFS36403.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL013PA1]
Length = 211
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E + LIE ++++FL + + R V R ++A +
Sbjct: 78 GLPGIPLAILRPDLE---MTLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDADLHV- 133
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+ +RA+A L TL+ ++ + +
Sbjct: 134 --DVVVSRAVAKLATLINWTADLIVE 157
>gi|284929108|ref|YP_003421630.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [cyanobacterium UCYN-A]
gi|284809567|gb|ADB95272.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [cyanobacterium UCYN-A]
Length = 243
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-----VFQLHPYP 72
+ + + L++ E Y + + ++NL E+FW +H+ DS+ F +
Sbjct: 17 NWKPTEKHLDQWEELYQEIILINNQVNLTRIVKPEEFWEKHLWDSIAGVVGLPFFQYSRK 76
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR 131
ID+G+GGGFPG+ +I + L++S+ KK + ++++ R
Sbjct: 77 MKVIDIGTGGGFPGLPINIVFPIWD---FTLLDSRRKKIEVVNFLLKILELENSWALTGR 133
Query: 132 IQEAP---QMITTCDVISARALADLDTLLEYSFPWL 164
++ + D+ RA+ + T EY P+L
Sbjct: 134 AEKIAHDSRFRGKYDIALIRAVGESSTCSEYILPFL 169
>gi|288573694|ref|ZP_06392051.1| methyltransferase GidB [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569435|gb|EFC90992.1| methyltransferase GidB [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 238
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLE-KLEYFYFLFLKWSK-KINLVSSSTVEDFWIRH 58
M Y S+ + ++ E +E KL + + +WS K+ L + W H
Sbjct: 1 MNYGTSDQV----HVTVEIPPLDERIETKLRTYSEILARWSSDKVRLTGPKDEDTIWKDH 56
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V DSL +L P+ +D+G+GGG PG+ +I +E + L++S++KK L +V
Sbjct: 57 VRDSLYALELLPHSGRLVDVGTGGGLPGLAWAICRPDLE---ITLLDSQSKKTGALESIV 113
Query: 119 QKTAARGK-VFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+ V R ++ A + D+ +AR +++ + EY P +
Sbjct: 114 SELEVENVSVIWGRSEQLALEEREIYDLAAARGVSEAGIVAEYLSPLVK 162
>gi|167951229|ref|ZP_02538303.1| hypothetical protein Epers_34650 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 120
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++L +++ L KW++ NL + + RH+ DSL + +D+G+G G PG
Sbjct: 9 DQLLHYHALLHKWNQAFNLTAVRDPLEMIDRHLLDSLSLLPYV-EGKRVLDMGTGAGLPG 67
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
I +I L + L++S KK F+R + + + EA Q +
Sbjct: 68 IPLAICLPQTQ---FVLLDSNGKKIRFVRQAMMELGLQNVEPVQARLEAYQPVEP 119
>gi|325677527|ref|ZP_08157191.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
gi|325551774|gb|EGD21472.1| glucose inhibited division protein B [Rhodococcus equi ATCC 33707]
Length = 228
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ L+ V W RHV + + +L +D+GSG G PG+
Sbjct: 29 EAYHASLASDGVVRGLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVIS 146
+I + V L+E +++ +L+ V V R ++ + + DV++
Sbjct: 89 AIARPDVR---VTLVEPLLRRSVYLQEFVDSVGLSNVTVVRGRAEQEGVVKEVGGADVVT 145
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L+ L +S P +
Sbjct: 146 SRAVAPLEKLARWSLPLVR 164
>gi|296141902|ref|YP_003649145.1| methyltransferase GidB [Tsukamurella paurometabola DSM 20162]
gi|296030036|gb|ADG80806.1| methyltransferase GidB [Tsukamurella paurometabola DSM 20162]
Length = 239
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E + + L+ V W RHV + + +L +D+GSG G PGI
Sbjct: 39 EEYAHVLATDGVVRGLIGPREVPRLWERHVLNCAVLGELVEAGETLVDVGSGAGLPGIPV 98
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I +E V L+E ++A FL +V R +E Q D +++
Sbjct: 99 AIARPDVE---VILVEPLLRRAVFLEEFCGPRLPNVRVVRGRAEERSVVQAAGGADAVTS 155
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA++ L +S P L +
Sbjct: 156 RAVSGFPKLAPWSAPLLRE 174
>gi|51473286|ref|YP_067043.1| glucose-inhibited division protein B [Rickettsia typhi str.
Wilmington]
gi|81610838|sp|Q68XT1|RSMG_RICTY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51459598|gb|AAU03561.1| glucose inhibited division protein B [Rickettsia typhi str.
Wilmington]
Length = 191
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
V E ++KL+ L KW+K INL+S +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 2 EVPSEIIQKLDILQNLIKKWNKSINLISDNTIPNFWQRHILDSLQLMQYISNKEIHLVDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFPGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 62 GSGAGFPGIVLSIAG----VAKVSLIEADLRKCIFLEKASKISNNSIQIINQRIEKIE-- 115
Query: 139 ITTCDVISARALADLDTL 156
C++++ RA ++L+T+
Sbjct: 116 -IDCNILTCRAFSNLNTI 132
>gi|315078980|gb|EFT50992.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL053PA2]
Length = 211
Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E + LIE ++++FL + + R V R ++A
Sbjct: 78 GLPGIPLAILRPDLE---MTLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDA---DL 131
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+ +RA+A L TL+ ++ + +
Sbjct: 132 RVDVVVSRAVAKLATLINWTADLIVE 157
>gi|256846127|ref|ZP_05551585.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
gi|256719686|gb|EEU33241.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_36A2]
Length = 232
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKMEKSLKYLEILLDYNSHTNLTAIREEKTIIEKHFLDSLLLQNLLKDGD 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNEDKK---FTLLDSVRKKTDFLELVKNELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|242281174|ref|YP_002993303.1| methyltransferase GidB [Desulfovibrio salexigens DSM 2638]
gi|242124068|gb|ACS81764.1| methyltransferase GidB [Desulfovibrio salexigens DSM 2638]
Length = 228
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----HPY 71
+ + + L Y+ L +KW+K +NLV E + + DSL + P
Sbjct: 30 EGFKAATDQARVLAYYLTLLVKWNKSMNLVGPQGWEQVFHSLIIDSLHLADFLDSLELPS 89
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ +DLG+G G PGI + + G L+ES+ K+ F+R ++ R VF
Sbjct: 90 NPVTLDLGAGAGLPGIPL---RALWQAGDYRLVESREKRCIFMRTALRMMKLPRTDVFQG 146
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R ++ P D+I ++A LLE+ P L ++
Sbjct: 147 RAEKIPSETLPADLILSKAFMPWKELLEFVKPMLAEQ 183
>gi|237743016|ref|ZP_04573497.1| glucose inhibited division protein B [Fusobacterium sp. 7_1]
gi|229433576|gb|EEO43788.1| glucose inhibited division protein B [Fusobacterium sp. 7_1]
Length = 232
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + + L++S KK FL V + + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNGNKK---FTLLDSVRKKTDFLELVKTELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|314922664|gb|EFS86495.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL001PA1]
gi|314965748|gb|EFT09847.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL082PA2]
gi|314982891|gb|EFT26983.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA3]
gi|315091199|gb|EFT63175.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA4]
gi|315094430|gb|EFT66406.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL060PA1]
gi|315105150|gb|EFT77126.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA2]
gi|327328926|gb|EGE70686.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL103PA1]
Length = 211
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 21 VSRETLEKLEYFYFLF----LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ R+ + + + + + W L+ + W RH+ +S+ + L P
Sbjct: 16 LYRDNYKTIRQYVDILASRGVDWG----LIGPREIGRLWERHILNSIALESLIPEGCRVA 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQE 134
D+GSG G PGI +I +E + LIE ++++FL + + R V R ++
Sbjct: 72 DVGSGAGLPGIPLAILRPDLE---MILIEPMLRRSNFLTEAIDELGLDDRVSVVRGRAED 128
Query: 135 APQMITTCDVISARALADLDTLLEYSF 161
A + DV+ +RA+A L TL+ ++
Sbjct: 129 ADLHV---DVVVSRAVAKLATLINWTA 152
>gi|291455686|ref|ZP_06595076.1| 16S rRNA methyltransferase GidB [Bifidobacterium breve DSM 20213]
gi|291382614|gb|EFE90132.1| 16S rRNA methyltransferase GidB [Bifidobacterium breve DSM 20213]
Length = 221
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS------IWID 77
+ L +LE F+ + + L+ V+ W RH+ +S + + D
Sbjct: 17 DALPRLERFHDKLSQEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRKATDGARFRTVAD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA- 135
+GSGGGFPG++T+ L LIE ++ +L V + + R E
Sbjct: 77 VGSGGGFPGLVTACCLPEC---SFTLIEPMERRVEWLAECVDLMGLKNVSIIRGRSDEVI 133
Query: 136 ----PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + V++ RA+A + L ++ P L
Sbjct: 134 NRVRKREMHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|312142022|ref|YP_004009358.1| methyltransferase gidb [Rhodococcus equi 103S]
gi|311891361|emb|CBH50682.1| methyltransferase GidB [Rhodococcus equi 103S]
Length = 226
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E ++ L+ V W RHV + + +L +D+GSG G PG+
Sbjct: 29 EAYHASLASDGVVRGLIGPREVPRLWSRHVLNCGVLGELVGANESVVDVGSGAGLPGVPL 88
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP--QMITTCDVIS 146
+I + V L+E +++ +L+ V V R ++ + + DV++
Sbjct: 89 AIARPDVR---VTLVEPLLRRSVYLQEFVDSVGLSNVTVVRGRAEQEGVVKEVGGADVVT 145
Query: 147 ARALADLDTLLEYSFPWLY 165
+RA+A L+ L +S P +
Sbjct: 146 SRAVAPLEKLARWSLPLVR 164
>gi|313771079|gb|EFS37045.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL074PA1]
gi|313806843|gb|EFS45341.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA2]
gi|313811756|gb|EFS49470.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL083PA1]
gi|313814234|gb|EFS51948.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL025PA1]
gi|313815712|gb|EFS53426.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL059PA1]
gi|313817631|gb|EFS55345.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL046PA2]
gi|313821544|gb|EFS59258.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA1]
gi|313824513|gb|EFS62227.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA2]
gi|313826857|gb|EFS64571.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL063PA1]
gi|313829175|gb|EFS66889.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL063PA2]
gi|313832290|gb|EFS70004.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL007PA1]
gi|313832750|gb|EFS70464.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL056PA1]
gi|314916200|gb|EFS80031.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA4]
gi|314917467|gb|EFS81298.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA1]
gi|314921804|gb|EFS85635.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL050PA3]
gi|314926249|gb|EFS90080.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL036PA3]
gi|314930931|gb|EFS94762.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL067PA1]
gi|314955401|gb|EFS99806.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL027PA1]
gi|314959145|gb|EFT03247.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA1]
gi|314961650|gb|EFT05751.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA2]
gi|314969096|gb|EFT13194.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA1]
gi|314975187|gb|EFT19282.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL053PA1]
gi|314977597|gb|EFT21692.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL045PA1]
gi|314979933|gb|EFT24027.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL072PA2]
gi|314985056|gb|EFT29148.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA1]
gi|314987125|gb|EFT31217.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA2]
gi|314990674|gb|EFT34765.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL005PA3]
gi|315081510|gb|EFT53486.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL078PA1]
gi|315083066|gb|EFT55042.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL027PA2]
gi|315086601|gb|EFT58577.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL002PA3]
gi|315088003|gb|EFT59979.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL072PA1]
gi|315097176|gb|EFT69152.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL038PA1]
gi|315099355|gb|EFT71331.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL059PA2]
gi|315102304|gb|EFT74280.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL046PA1]
gi|315107401|gb|EFT79377.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL030PA1]
gi|315109696|gb|EFT81672.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL030PA2]
gi|327332488|gb|EGE74223.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL096PA2]
gi|327334112|gb|EGE75827.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL096PA3]
gi|327444482|gb|EGE91136.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL013PA2]
gi|327446735|gb|EGE93389.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL043PA2]
gi|327448823|gb|EGE95477.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL043PA1]
gi|327454240|gb|EGF00895.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA3]
gi|327456299|gb|EGF02954.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL083PA2]
gi|328755997|gb|EGF69613.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL087PA1]
gi|328757988|gb|EGF71604.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL020PA1]
gi|328758962|gb|EGF72578.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL025PA2]
gi|328759885|gb|EGF73475.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL099PA1]
Length = 211
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + + L+ + W RH+ +S+ + L P D+GSG
Sbjct: 18 RDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGA 77
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E + LIE ++++FL + + R V R ++A +
Sbjct: 78 GLPGIPLAILRPDLE---MTLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDADLHV- 133
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+ +RA+A L TL+ ++ + +
Sbjct: 134 --DVVVSRAVAKLATLINWTADLIVE 157
>gi|89067426|ref|ZP_01154939.1| glucose-inhibited division protein B [Oceanicola granulosus
HTCC2516]
gi|89046995|gb|EAR53049.1| glucose-inhibited division protein B [Oceanicola granulosus
HTCC2516]
Length = 188
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPGIITS 90
F L KW+ +INLVS ++ D RH+ DS+++++ P W DLGSGGGFPGII +
Sbjct: 4 FAQLVAKWNPRINLVSKGSLADLHDRHIADSIQLYRHIPPEVESWADLGSGGGFPGIILA 63
Query: 91 IQLSSIE--GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
I V L+ES +KA+FLR ++ V RI++ P M +SAR
Sbjct: 64 ILAKGTRSSPIEVTLVESDQRKATFLRTASRQLDLAVNVATSRIEDLPPM--NAHGLSAR 121
Query: 149 ALADLDTLLEYSFPWLYQ 166
ALA L LL+Y+ L
Sbjct: 122 ALAPLTKLLDYAARHLSP 139
>gi|157363104|ref|YP_001469871.1| methyltransferase GidB [Thermotoga lettingae TMO]
gi|189040727|sp|A8F3S3|RSMG_THELT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157313708|gb|ABV32807.1| methyltransferase GidB [Thermotoga lettingae TMO]
Length = 225
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+ EKL+ + L + INL S E +H+ D VF + +D
Sbjct: 12 GIKIDDSKTEKLDSYIDLLIS--APINLTSLRDKEYAIHKHIVD--IVFPVKMLTGKLLD 67
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP 136
+G+GGG PG+I +I L+ES KK +L ++ + R ++ P
Sbjct: 68 VGTGGGIPGLILAILFP----INATLVESVRKKVMWLEKILNMLNIGNVNLLCSRAEKLP 123
Query: 137 -QMITTCDVISARALADLDTLLEYSFPWLY 165
+ D+++ARA+++L LLE P+
Sbjct: 124 ADKKESFDIVTARAVSELRILLELCAPFCK 153
>gi|325295305|ref|YP_004281819.1| ribosomal RNA small subunit methyltransferase G [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065753|gb|ADY73760.1| Ribosomal RNA small subunit methyltransferase G [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 208
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL------ 63
LR LN ++ + +K E + L KW K+IN+ S + ++ +H DSL
Sbjct: 6 LRELCELNEIDLFEKEYKKFERYRELLKKWGKRINITSILSDKEIEEKHFFDSLLGLKAF 65
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+++ + + D+GSGGGFPG+ +I I+ +LIES++K+ FL V ++
Sbjct: 66 KLYGFDYHNKLLGDVGSGGGFPGVPLAIT---IQNSTFDLIESRHKRCVFLEQVKRELEL 122
Query: 124 RGK-VFACRIQEAPQMITTCDVISARAL 150
V R++ + D++ RA+
Sbjct: 123 PNVKVLCTRVE---SIDRNYDMLLMRAV 147
>gi|114326674|ref|YP_743831.1| methyltransferase gidB [Granulibacter bethesdensis CGDNIH1]
gi|122328341|sp|Q0BW94|RSMG_GRABC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|114314848|gb|ABI60908.1| methyltransferase gidB [Granulibacter bethesdensis CGDNIH1]
Length = 213
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS-LRVFQLHPYP 72
L VSRET EKL + L +W++ +NLVS + VE RH+ DS + L P P
Sbjct: 17 LLPAGSGVSRETGEKLALYESLLTRWTRTVNLVSRNDVEHIRDRHILDSLQLLPLLEPLP 76
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
ID+GSGGG PG++ +I G +L+E+ +KA+FLR + T + V ACRI
Sbjct: 77 GPLIDIGSGGGLPGLVLAIAT----GRETHLVEADQRKAAFLREAARATESNVTVHACRI 132
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ I V++ARALA L+ LL Y+ L +
Sbjct: 133 EQC--NIAPAPVLTARALAPLNVLLGYALRLLSK 164
>gi|260495538|ref|ZP_05815663.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
gi|260196880|gb|EEW94402.1| 16S rRNA methyltransferase GidB [Fusobacterium sp. 3_1_33]
Length = 232
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDED 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + + L++S KK FL V + + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLAIFNGNKK---FTLLDSVRKKTDFLELVKTELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|289209756|ref|YP_003461822.1| methyltransferase GidB [Thioalkalivibrio sp. K90mix]
gi|288945387|gb|ADC73086.1| methyltransferase GidB [Thioalkalivibrio sp. K90mix]
Length = 209
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 6/152 (3%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ + + + +E L + +W++ NL + + + RH+ DSL + +
Sbjct: 10 LGAVADEWALDAAAIEALAIYLEQLGRWNRVHNLTAVRDPQQWIPRHILDSLTLRPYL-H 68
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G+G G PG + + L++S K+ FLR V+ R +
Sbjct: 69 GDRILDVGTGAGLPGFVLAAC---ERRRDFCLLDSAAKRIRFLRNVIGLAGLSRVEAVHM 125
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFP 162
RI++ + + ARA ++ P
Sbjct: 126 RIEDF-RPAAPYTTVLARAFKAPADMVARVAP 156
>gi|145351446|ref|XP_001420088.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580321|gb|ABO98381.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPS--------IWIDLGSGGGFPGIITSIQLSSI 96
L +++ E+ H D+L + ++ S +D+GSG G PGI +I
Sbjct: 2 LTGATSAEEVLESHASDALALLKVFDDASETIGSDATRVLDVGSGAGLPGIPLAIARPGW 61
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA---PQMITTCDVISARALAD 152
L+++ K+ +FL ++ V R ++ + + DV++ARA+A+
Sbjct: 62 R---FTLLDTLRKRTNFLEATTREIGLTNVDVVWGRAEDLGRDEKWRESFDVVTARAVAE 118
Query: 153 LDTLLEYSFPW 163
L L E+ P
Sbjct: 119 LRVLAEFCVPL 129
>gi|313792580|gb|EFS40666.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA1]
gi|313803581|gb|EFS44763.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL110PA2]
gi|313839609|gb|EFS77323.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL086PA1]
gi|314963887|gb|EFT07987.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL082PA1]
gi|327457427|gb|EGF04082.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL092PA1]
Length = 211
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ R+ + + + + + L+ + W RH+ +S+ + L P D+GS
Sbjct: 16 LYRDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PGI +I +E + LIE ++++FL + + +V R A
Sbjct: 76 GAGLPGIPLAILRPDLE---MTLIEPMLRRSNFLTEALDELGLDDRVTVVR-GRAEDADL 131
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV+ +RA+A L TL+ ++ + +
Sbjct: 132 RVDVVVSRAVAKLATLINWTADLIVE 157
>gi|29336750|sp|Q8GHA0|RSMG_HELBI RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|27462195|gb|AAO15371.1| GidB [Helicobacter bizzozeronii]
Length = 179
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL+ F L L+W NL + +D +++DSL+V +D+GSG GFP I
Sbjct: 4 KLDLFTHLLLEWGSVHNLSGAKNHQDI-EHNIQDSLQVLDFIAPFKSCLDIGSGAGFPAI 62
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
S+ S+ L+E KK +FL +V ++ RI+ D+I+
Sbjct: 63 PLSLACSNAR---FILLEPNAKKVAFLHHVKLALNLNNLEIQRMRIEHVSPQSVLVDLIT 119
Query: 147 ARALADLDTLLEYSFPWLYQK 167
+RAL + L+ S P+L ++
Sbjct: 120 SRALMNAQNLIALSAPFLREQ 140
>gi|282853031|ref|ZP_06262368.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J139]
gi|282582484|gb|EFB87864.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J139]
Length = 208
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 23 RETLEKLEYFYFLF----LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
R+ + + + + + W L+ + W RH+ +S+ + L P D+
Sbjct: 15 RDNYKTIRQYVDILASRGVDWG----LIGPREIGRLWERHILNSIALESLIPEGCRVADV 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAP 136
GSG G PGI +I +E + LIE ++++FL + + R V R ++A
Sbjct: 71 GSGAGLPGIPLAILRPDLE---MILIEPMLRRSNFLTEAIDELGLDDRVSVVRGRAEDAD 127
Query: 137 QMITTCDVISARALADLDTLLEYSF 161
+ DV+ +RA+A L TL+ ++
Sbjct: 128 LHV---DVVVSRAVAKLATLINWTA 149
>gi|291276349|ref|YP_003516121.1| glucose-inhibited division protein B [Helicobacter mustelae 12198]
gi|290963543|emb|CBG39375.1| glucose-inhibited division protein B; GidB [Helicobacter mustelae
12198]
Length = 179
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
E + L L+W++ NL + T ++ DS+ + S ID+GSG GFP
Sbjct: 6 QEAFLTYINLLLEWNQIHNLSGNLTP-RLAEEYLLDSIYPLEFIQSFSRCIDVGSGAGFP 64
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
+ +I E LIE +NK+A+FL+YV + +V RI+E D+
Sbjct: 65 AVPLAICCPRSE---FLLIEPRNKRAAFLQYVSSELGLSNIQVKKMRIEEVGGR--CVDL 119
Query: 145 ISARALADLDTLLEYSFPWL 164
I++RA+ D +L+ L
Sbjct: 120 ITSRAVMDAPSLIASCSHLL 139
>gi|149194230|ref|ZP_01871327.1| Glucose inhibited division protein [Caminibacter mediatlanticus
TB-2]
gi|149135405|gb|EDM23884.1| Glucose inhibited division protein [Caminibacter mediatlanticus
TB-2]
Length = 176
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ K E F LKW+K L + + E + +EDSL + ID+G+G GFP
Sbjct: 1 MNKFEIFTNELLKWNKTHKLTNYNEDE--IKKQIEDSLYPLEKIKDSKTAIDIGTGAGFP 58
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
G+I +I + + + L+E K+ SFL Y+ + +V R+++A + D+
Sbjct: 59 GLILAIAMPNTKW---YLVEPLKKRYSFLNYIKTILNLKNVEVIPNRVEKA--NLPKVDL 113
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
I++RA+ + +L+ P+L +
Sbjct: 114 ITSRAVMKTNDILKIIKPFLKK 135
>gi|317123170|ref|YP_004103173.1| methyltransferase GidB [Thermaerobacter marianensis DSM 12885]
gi|315593150|gb|ADU52446.1| methyltransferase GidB [Thermaerobacter marianensis DSM 12885]
Length = 250
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/141 (34%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PYPSIWIDLGSGGGFPGIITS 90
+ + + NL ++ + H DSL + P + +DLGSG GFPGI
Sbjct: 34 EMVREAGARFNLTGIDRDDEALVLHYLDSLLALSVPGGWPAEGLLVDLGSGAGFPGIPLL 93
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEA---PQMITTCDVI 145
+ L GL L+E++ KKA+FL VQ+ R V A R +E PQ D +
Sbjct: 94 VALGRGWRGL--LLEAQQKKAAFLADAVQRLGLAERVTVAARRAEEVGRDPQWRGQADAV 151
Query: 146 SARALADLDTLLEYSFPWLYQ 166
+ARALA LD +LEY P L
Sbjct: 152 TARALAPLDVVLEYGLPLLRP 172
>gi|159904136|ref|YP_001551480.1| 16S rRNA methyltransferase GidB [Prochlorococcus marinus str. MIT
9211]
gi|159889312|gb|ABX09526.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9211]
Length = 236
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWIDLGSGGGFPGIITSIQ 92
++W++K+NL DFWI HV DSL + ID+G+G GFPG+ +I
Sbjct: 21 IEWNEKVNLTRLLKGSDFWISHVLDSLWPLRYELNHFESSRKIIDVGTGCGFPGLAIAIA 80
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQ---MITTCDVISA 147
L E + LI+S ++K + ++ + Q R V R + Q D+ A
Sbjct: 81 LPRSE---ITLIDSISRKTTAVKAISQTLGLGERVSVRTERAEVIGQSISFRGNYDLAVA 137
Query: 148 RALADLDTLLEYSFPWLYQK 167
RA+A + EY P L +
Sbjct: 138 RAVATSPVVAEYLIPLLNAQ 157
>gi|50843782|ref|YP_057009.1| glucose-inhibited division protein B [Propionibacterium acnes
KPA171202]
gi|289424162|ref|ZP_06425945.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK187]
gi|289427458|ref|ZP_06429171.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J165]
gi|295131872|ref|YP_003582535.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK137]
gi|55976373|sp|Q6A5B2|RSMG_PROAC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50841384|gb|AAT84051.1| glucose inhibited division protein B [Propionibacterium acnes
KPA171202]
gi|289154859|gb|EFD03541.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK187]
gi|289159388|gb|EFD07579.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes J165]
gi|291376738|gb|ADE00593.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes SK137]
gi|332676737|gb|AEE73553.1| ribosomal RNA small subunit methyltransferase G [Propionibacterium
acnes 266]
Length = 208
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ R+ + + + + + L+ + W RH+ +S+ + L P D+GS
Sbjct: 13 LYRDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGS 72
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQM 138
G G PGI +I +E + LIE ++++FL + + R V R ++A
Sbjct: 73 GAGLPGIPLAILRPDLE---MTLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDADLH 129
Query: 139 ITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DV+ +RA+A L TL+ ++ + +
Sbjct: 130 V---DVVVSRAVAKLATLINWTADLIVE 154
>gi|239918802|ref|YP_002958360.1| glucose-inhibited division protein B [Micrococcus luteus NCTC 2665]
gi|281414971|ref|ZP_06246713.1| 16S rRNA methyltransferase GidB [Micrococcus luteus NCTC 2665]
gi|239840009|gb|ACS31806.1| glucose-inhibited division protein B [Micrococcus luteus NCTC 2665]
Length = 241
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 5/160 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + E L + E + + L+ W RHV + V
Sbjct: 29 PAPPLTDALRPAAVELFGEALPRAEAYVAHLADTGIEWGLIGPREAPRLWERHVLNCAVV 88
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+L P ++ D+GSG G PG+ ++ + LIE ++ +L VV
Sbjct: 89 EELLPQGALVADVGSGAGLPGLCLALARPDCQ---FLLIEPLERRVEWLDRVVADLGLEN 145
Query: 126 K-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V R ++ + DV++ARA++ L TL+ + P L
Sbjct: 146 VDVIRGRAEQVSGNLD-VDVVTARAVSALKTLVPLTMPML 184
>gi|34763618|ref|ZP_00144549.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27886716|gb|EAA23858.1| Glucose inhibited division protein B [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 232
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-PYP 72
L VS + +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDEDKIEKSLKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKDGD 68
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I + L++S KK FL V + + ++ R
Sbjct: 69 KTLIDIGTGAGFPGMMLTIFNEDKK---FTLLDSVRKKTDFLELVKNELNLKNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|315420687|gb|ADU15876.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G P +
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPCVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|229816219|ref|ZP_04446529.1| hypothetical protein COLINT_03269 [Collinsella intestinalis DSM
13280]
gi|229808227|gb|EEP44019.1| hypothetical protein COLINT_03269 [Collinsella intestinalis DSM
13280]
Length = 257
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWID 77
+ ET E+ + ++ +NL + D I H+ DSL +++ P P ++D
Sbjct: 37 IELDSETAERCVQHLLYVNQVNQVMNLTRIKDIHDALILHIVDSLALYRDLPIDPEHFLD 96
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ-EA 135
+G+G GFPGI ++ G L++S KK + + + R + A
Sbjct: 97 MGTGAGFPGIPFALY----SGCSGVLLDSVGKKIDAVNAFIDALGIEDVEGIHDRCESYA 152
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWL 164
+M D + ARA+ + ++EY P+L
Sbjct: 153 MKMRGRFDTVFARAVGQMSMIIEYGTPFL 181
>gi|313835184|gb|EFS72898.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA2]
gi|314929156|gb|EFS92987.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL044PA1]
gi|314970894|gb|EFT14992.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL037PA3]
Length = 223
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
R+ + + + + L+ + W RHV +S + L P D+GSG
Sbjct: 28 RDNYKSIRRYIDILASRGMDWGLIGPREIGKLWERHVLNSAALENLIPEGCRVADVGSGA 87
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
G PGI +I +E + LIE +++ FL V++ R V R + A
Sbjct: 88 GLPGIPLAILRPDLE---MTLIEPMLRRSDFLNETVEELGLDDRVTVVRSRAENAG---L 141
Query: 141 TCDVISARALADLDTLLEYSF 161
D++ +RA+A L TL+E++
Sbjct: 142 DVDIVVSRAVAKLATLIEWTA 162
>gi|21618112|gb|AAM67162.1| glucose-inhibited division protein B-like protein [Arabidopsis
thaliana]
Length = 196
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 18/126 (14%)
Query: 55 WIRHVEDSLRVFQLHP-----------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
RH+EDSL + ID+GSG G PG++ +I V L
Sbjct: 1 MERHIEDSLAILPPIKTCYNLHSSDLFDHINLIDVGSGAGLPGLVLAIACPDWR---VTL 57
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQ---EAPQMITTCDVISARALADLDTLLEY 159
+ES NK+ FL +VV T + R + DV ARA+A++ L EY
Sbjct: 58 LESINKRCVFLEHVVNVTGLTNVTIVRGRAESCGHDVMYREKFDVAIARAVAEMRVLAEY 117
Query: 160 SFPWLY 165
P +
Sbjct: 118 CLPLVR 123
>gi|315420685|gb|ADU15875.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+G G G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGRGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|260654329|ref|ZP_05859819.1| 16S rRNA methyltransferase GidB [Jonquetella anthropi E3_33 E1]
gi|260630962|gb|EEX49156.1| 16S rRNA methyltransferase GidB [Jonquetella anthropi E3_33 E1]
Length = 212
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + + ++ L SS W HV D L + ID+G+GGG PG++
Sbjct: 2 LKEYLSQLCQANGRVRLTGSSDPTVLWQEHVTDCLYLASAVEGTEKIIDVGTGGGLPGVV 61
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE-APQMITTCDVIS 146
++ V L++S+ KKA L +V+ V + R +E A D
Sbjct: 62 LAVCFPKSH---VTLLDSQKKKAVQLGKIVEALELENVSVISARSEELAAARREEWDCAV 118
Query: 147 ARALADLDTLLEYSFPWLYQ 166
ARA+ + L EY P + Q
Sbjct: 119 ARAVCEAPVLAEYLSPLVRQ 138
>gi|315420681|gb|ADU15873.1| 7-methylguanosine methyltransferase [Mycobacterium tuberculosis]
Length = 224
Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV V W RH+ + + +L +D+GSG G PG+ +I ++ V L+
Sbjct: 35 LVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPLAIARPDLQ---VVLL 91
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFP 162
E ++ FLR +V ++ R +E + D +RA+A LD L ++S P
Sbjct: 92 EPLLRRTEFLREMVTDRGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSMP 151
Query: 163 WLYQ 166
+
Sbjct: 152 LIRP 155
>gi|103488332|ref|YP_617893.1| methyltransferase GidB [Sphingopyxis alaskensis RB2256]
gi|123379470|sp|Q1GP62|RSMG_SPHAL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|98978409|gb|ABF54560.1| methyltransferase GidB [Sphingopyxis alaskensis RB2256]
Length = 233
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HP 70
+L + S E ++E F + + + K NL+++ST+ W RH+ DS ++ L
Sbjct: 28 GWLTQAFAPSTEQWAQIERFVTMLIAENAKQNLIAASTIPAIWARHIADSAQLLALDTRE 87
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+WIDLGSG G PG++ +I + + L+ES+ ++ FLR VV + A
Sbjct: 88 GEGLWIDLGSGPGLPGLVVAI----LSERPMLLVESRRRRCDFLRAVVAELALD----HV 139
Query: 131 RIQEAPQMI---TTCDVISARALADLDTLLEYSFPW 163
+ EAP ISARA A LD L++ S +
Sbjct: 140 EVAEAPLERVATRPAATISARAFAPLDRLIDLSARF 175
>gi|308235527|ref|ZP_07666264.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14018]
gi|311114009|ref|YP_003985230.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14019]
gi|310945503|gb|ADP38207.1| 16S rRNA methyltransferase GidB [Gardnerella vaginalis ATCC 14019]
Length = 236
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI------D 77
+ L+K + F+ K LV + W RH+ +S V D
Sbjct: 32 DALDKCKMFHVKLQKEGLLRGLVGPRDMSILWERHILNSAAVVPFIKEAIKKSKKKSIAD 91
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGGFPGI+ + L + V LIE ++ +L+ V+ +F R E
Sbjct: 92 VGSGGGFPGIVIAACLPDCD---VTLIEPMERRVLWLKECVELMGLDNVTIFHGRSDEII 148
Query: 137 QMITT-----CDVISARALADLDTLLEYSFPWL 164
+ I + DV++ RA+A + L ++ P L
Sbjct: 149 EKIKSHDISPFDVVTCRAVAPMTKLAGWTIPLL 181
>gi|148555756|ref|YP_001263338.1| methyltransferase GidB [Sphingomonas wittichii RW1]
gi|189040720|sp|A5VA84|RSMG_SPHWW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|148500946|gb|ABQ69200.1| methyltransferase GidB [Sphingomonas wittichii RW1]
Length = 217
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--IWIDL 78
V R T+ LE + L + NL+++ST E W RH+ DS ++ + WIDL
Sbjct: 16 VPRGTMAGLEKLVAMILDEMPRQNLIAASTAESIWTRHIVDSAQLVPMVGKGGPLRWIDL 75
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAP 136
GSG GFPG++ ++ L + + L+ES+ K+ FLR++ + R V R++
Sbjct: 76 GSGAGFPGMVVALMLPELR---MTLVESRRKRIDFLRFMAESLGIADRVTVAGQRLEMLE 132
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
+ DVISARA A LD LL + +
Sbjct: 133 S--SPHDVISARAFAPLDRLLPLAHRF 157
>gi|332703863|ref|ZP_08423951.1| Ribosomal RNA small subunit methyltransferase G [Desulfovibrio
africanus str. Walvis Bay]
gi|332554012|gb|EGJ51056.1| Ribosomal RNA small subunit methyltransferase G [Desulfovibrio
africanus str. Walvis Bay]
Length = 233
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 10/168 (5%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
DS + A L ++ + KL + L ++W++++NLV +S+ + R V DS
Sbjct: 21 DSRQLTEAAAALGR-SLDADQAGKLALYLGLLVEWNRRMNLVGASSWREVLSRLVMDSWH 79
Query: 65 VFQL-----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ P +DLG+G G PGI I G L+E + K+ FLR V
Sbjct: 80 LADHLAELPLPAEPRSLDLGAGAGLPGIPLRIF---WNSGEYRLVEIREKRTIFLRVAVA 136
Query: 120 KTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
K R V R++ D++ RA LE P L
Sbjct: 137 KLDLPRTFVLRSRVENLGADALPADLVLGRAFKPWPEYLELVQPMLAP 184
>gi|254548923|ref|ZP_05139370.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 224
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLRNCAVIGELLERGDRVVDIGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ FLR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLRRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|13357596|ref|NP_077870.1| glucose inhibited division protein B [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|13959380|sp|Q9PRA5|RSMG_UREPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|11356855|pir||E82942 glucose inhibited division protein B UU040 [imported] - Ureaplasma
urealyticum
gi|6898987|gb|AAF30445.1|AE002103_10 glucose inhibited division protein B [Ureaplasma parvum serovar 3
str. ATCC 700970]
Length = 214
Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSIWIDLGSGGG 83
E + + K+++ NL + + + DSL ++ + ID+GSG G
Sbjct: 3 FEKYKTIIQKYNQIFNLTRLDSDDKIYQNFFLDSLAPYKELDFFTQNTNLKLIDIGSGSG 62
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ-MITT 141
PG++ I ++ + L+E+ K+ FL+ + Q+ + R ++ Q M +
Sbjct: 63 IPGVVLKIIFKNLN---LTLLEANQKRCEFLKILTQELGLNDVLIWNMRAEDLTQSMRES 119
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
D+ ++RA+A LD +LE S ++
Sbjct: 120 FDIATSRAVASLDKILEISAAFVK 143
>gi|262066108|ref|ZP_06025720.1| 16S rRNA methyltransferase GidB [Fusobacterium periodonticum ATCC
33693]
gi|291380203|gb|EFE87721.1| 16S rRNA methyltransferase GidB [Fusobacterium periodonticum ATCC
33693]
Length = 232
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 16 LNTYNVS--RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
L VS +EK + + L ++ NL + + +H DSL + L
Sbjct: 9 LEKIKVSYDENKIEKALKYLEILLDYNSHTNLTAIREEKAIIEKHFLDSLLLQNLLKEED 68
Query: 74 I-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
ID+G+G GFPG++ +I L++S KK FL V + + ++ R
Sbjct: 69 KALIDIGTGAGFPGMMLTIFNEDKN---FTLLDSVRKKTDFLELVKNELSLNNVEIINGR 125
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLY 165
+E DV R +++L +LEY P+L
Sbjct: 126 AEEIIKDRREKYDVGLCRGVSNLSVILEYEIPFLK 160
>gi|289705890|ref|ZP_06502269.1| 16S rRNA methyltransferase GidB [Micrococcus luteus SK58]
gi|289557375|gb|EFD50687.1| 16S rRNA methyltransferase GidB [Micrococcus luteus SK58]
Length = 216
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 5/160 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
L + E L + E + + L+ W RHV + V
Sbjct: 4 PAPPLTDALRPAAVELFGEALPRAEAYVAHLADTGIEWGLIGPREAPRLWERHVLNCAVV 63
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+L P ++ D+GSG G PG+ ++ + LIE ++ +L VV
Sbjct: 64 EELLPQGALVADVGSGAGLPGLCLALARPDCQ---FLLIEPLERRVEWLDMVVADLGLEN 120
Query: 126 K-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V R ++ + DV++ARA++ L TL+ + P L
Sbjct: 121 VDVIRGRAEQVSGNLD-VDVVTARAVSALKTLVPLTMPML 159
>gi|328905778|gb|EGG25554.1| 16S rRNA methyltransferase GidB [Propionibacterium sp. P08]
Length = 210
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ R+ + + + + L+ + W RHV +S + L P D+GS
Sbjct: 13 LYRDNYKSIRRYIDILASRGMDWGLIGPREIGKLWERHVLNSAALENLIPEGCRVADVGS 72
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQM 138
G G PGI +I +E + LIE +++ FL V++ R V R + A
Sbjct: 73 GAGLPGIPLAILRPDLE---MTLIEPMLRRSDFLNETVEELGLDDRVTVVRSRAENAG-- 127
Query: 139 ITTCDVISARALADLDTLLEYSF 161
D++ +RA+A L TL+E++
Sbjct: 128 -LDVDIVVSRAVAKLATLIEWTA 149
>gi|307720270|ref|YP_003891410.1| 16S rRNA m(7)G-527 methyltransferase [Sulfurimonas autotrophica DSM
16294]
gi|306978363|gb|ADN08398.1| 16S rRNA m(7)G-527 methyltransferase [Sulfurimonas autotrophica DSM
16294]
Length = 195
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ + ++ + +K++ + KW+K NL + E + D++
Sbjct: 3 LKTTLASDKIDLPNDFFQKVQKYKEHLFKWNKIHNLTGAKN-EQTLNEFIYDAVFPVSFL 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
P +D+G+G GFPG+I + L + + L+E K+ASFL+++ V
Sbjct: 62 PKVDSLMDIGTGAGFPGMILAFALPDTK---ITLVEPLTKRASFLQFIKADLGLENVSVV 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++E D+I++RA+ D LL S +
Sbjct: 119 KKRVEEME--PQMFDLITSRAVTDTKMLLNLSKNF 151
>gi|326386155|ref|ZP_08207779.1| methyltransferase GidB [Novosphingobium nitrogenifigens DSM 19370]
gi|326209380|gb|EGD60173.1| methyltransferase GidB [Novosphingobium nitrogenifigens DSM 19370]
Length = 252
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
M ++ +L+ T V +E+L + + +++ NLV+ ++++ W RH+
Sbjct: 1 MNALIADEAAAQAWLVETLGVDAAGMERLGRLVDMLREENERQNLVARASLDQVWQRHIV 60
Query: 61 DSLRVFQLH------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
DS ++ + W+DLG+G GFPG++ + V L++S+ + +L
Sbjct: 61 DSAQLLSVSRGTSAGEGLGSWLDLGTGAGFPGLVIAALQPE---RPVVLVDSRRLRTEWL 117
Query: 115 RYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R +V R+++ P + T VISARA A L+ LL + +
Sbjct: 118 ARAASTLGLDRVEVVLSRVEDLP--VGTHAVISARAFAPLERLLPLAARF 165
>gi|220914664|ref|YP_002489973.1| 16S rRNA methyltransferase GidB [Arthrobacter chlorophenolicus A6]
gi|254766876|sp|B8H8Y9|RSMG_ARTCA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|219861542|gb|ACL41884.1| methyltransferase GidB [Arthrobacter chlorophenolicus A6]
Length = 216
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+ + + + L+ + W RHV + + P S D+GSG G
Sbjct: 18 DRLDLAKRYVEHLATSGTERGLIGPREIPRLWSRHVLNCAVIESEIPQGSRVADVGSGAG 77
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG+ +I +E + LIE ++ +L+ VV V R + A +
Sbjct: 78 LPGLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTVMRSRAELAVGHVE-A 133
Query: 143 DVISARALADLDTLLEYSFPWL 164
DV++ARA++ L L + P L
Sbjct: 134 DVVTARAVSALTNLAGLTIPLL 155
>gi|326404880|ref|YP_004284962.1| ribosomal RNA small subunit methyltransferase G [Acidiphilium
multivorum AIU301]
gi|325051742|dbj|BAJ82080.1| ribosomal RNA small subunit methyltransferase G [Acidiphilium
multivorum AIU301]
Length = 217
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDSLRVFQLHPYPS-IWID 77
VSRETL +LE F L L+W+ +INLVS + W RH+ DSL++ L P + D
Sbjct: 24 VSRETLSRLEAFAALILRWTARINLVSRKDAAPAEIWSRHILDSLQMLPLVPQGAFRAAD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LGSGGG PG++ +I I LIES +KA+FL+ + + V + RI++A
Sbjct: 84 LGSGGGLPGLVLAIARPEI---GFTLIESDRRKAAFLQTAIAELKLNATVLSVRIEQARL 140
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +++ARALA L L Y+ P L
Sbjct: 141 EPSP--LVTARALAALPVLFGYAAPLLAP 167
>gi|26554254|ref|NP_758188.1| glucose-inhibited division protein GidB [Mycoplasma penetrans HF-2]
gi|29336687|sp|Q8EUW9|RSMG_MYCPE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|26454263|dbj|BAC44592.1| glucose-inhibited division protein GidB [Mycoplasma penetrans HF-2]
Length = 237
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHPYPSIWIDL 78
S E K+ + + +K NL E+ + ++ +S+ F +D+
Sbjct: 19 SNEVESKITIYKNYLQQENKIHNLTRLDKEEEIYQKYFYESILNFHNDLFDNKNINLLDI 78
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE-AP 136
GSG G PGI I I + ++ES KK +FL +V K + R ++
Sbjct: 79 GSGSGVPGIFLKILFPHIN---LYIVESNTKKVNFLNNLVDKLELENVFISNQRCEDYIK 135
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLY 165
I D+I+ RA+A+L LLE SFP L
Sbjct: 136 DKIEFFDLITCRAVAELRILLELSFPGLK 164
>gi|332672288|ref|YP_004455296.1| methyltransferase GidB [Cellulomonas fimi ATCC 484]
gi|332341326|gb|AEE47909.1| methyltransferase GidB [Cellulomonas fimi ATCC 484]
Length = 223
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
F+ + LV V W RH+ +S P +DLGSG G PG++ +
Sbjct: 34 FHAMLTDEGVLRGLVGPREVSRLWARHLLNSAAAVPFLPETGRIVDLGSGAGLPGVVIAA 93
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCDVISARAL 150
S E V L+E ++ +LR V + + V R +E D ++ARA+
Sbjct: 94 MRPSCE---VVLLEPMERRTDWLREVADRLSLDNVVVERARAEEVHG-RLVADAVTARAV 149
Query: 151 ADLDTLLEYSFPWLY 165
A LD L + P L
Sbjct: 150 AALDKLYRLALPLLR 164
>gi|222100852|ref|YP_002535420.1| Methyltransferase gidB [Thermotoga neapolitana DSM 4359]
gi|254766910|sp|B9KAS1|RSMG_THENN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|221573242|gb|ACM24054.1| Methyltransferase gidB [Thermotoga neapolitana DSM 4359]
Length = 229
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
+EK + L + NL + +++ ++V + L + +D+GSG
Sbjct: 17 ESQIEKTFRYLNELL--NSPHNLTALRSLDSAVHKNVAEILIPLKHENLRGSLLDVGSGN 74
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-PQMIT 140
G PG+I +I ++ V L++SK K FL +VV+K V R + +
Sbjct: 75 GVPGLILAIFFPELK---VTLLDSKEKAVQFLEHVVRKLNLENAAVVKERAENFSREHRE 131
Query: 141 TCDVISARALADLDTLLEYSFPWLY 165
D +ARA+A L+TL+E P +
Sbjct: 132 EYDYATARAVARLNTLVEICAPAVR 156
>gi|124268970|ref|YP_001022974.1| 16S rRNA methyltransferase GidB [Methylibium petroleiphilum PM1]
gi|166224598|sp|A2SMF0|RSMG_METPP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|124261745|gb|ABM96739.1| glucose inhibited division protein B [Methylibium petroleiphilum
PM1]
Length = 221
Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-----WIDLGSGGGFPGIITSIQ 92
+W++ NL + +H+ DSL V + +D+GSG G PG+ ++
Sbjct: 43 RWNRVYNLTAVREPAQMLTQHLLDSLAVVAPLRRQTRATAIALLDVGSGAGLPGVAIAVA 102
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISARALA 151
I V+ +++ +KKASF+R V + + R++ + DVI++RA A
Sbjct: 103 CPEIH---VSCVDTVSKKASFIRQVGVELGLTHFQALHARVESLAS--SNFDVITSRAFA 157
Query: 152 DLDTLLEYS 160
L + +
Sbjct: 158 SLADFVTLT 166
>gi|114762198|ref|ZP_01441666.1| glucose-inhibited division protein B [Pelagibaca bermudensis
HTCC2601]
gi|114545222|gb|EAU48225.1| glucose-inhibited division protein B [Roseovarius sp. HTCC2601]
Length = 181
Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats.
Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPGIITSIQL 93
+ KWS KINLV+ ST+ D W RH+ DS +VF L +W DLG+GGGFPG++ +I
Sbjct: 1 MLEKWSPKINLVAKSTLSDGWNRHIIDSAQVFDLRQQDTGLWADLGAGGGFPGLVVAILA 60
Query: 94 SSIEGGL-VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
+ + V L+ES +KA FLR V+++T V RI++ + D++SARALAD
Sbjct: 61 HELAPEMKVALVESDQRKAVFLRSVLRETGVSADVKVARIEQLAPL--EADILSARALAD 118
Query: 153 LDTLLEYSFPWLYQ 166
L TLL ++ L
Sbjct: 119 LPTLLSFAERHLAP 132
>gi|322690178|ref|YP_004209912.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis 157F]
gi|320461514|dbj|BAJ72134.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 221
Score = 123 bits (309), Expect = 8e-27, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KLE F+ + + L+ V+ W RH+ +S + D
Sbjct: 17 DALPKLERFHAEIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVAD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR----I 132
+GSGGGFPG++ + L + LIE ++ +L V + ++ R I
Sbjct: 77 VGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSDAVI 133
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q+ + I V++ RA+A + L ++ P L
Sbjct: 134 QQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|15611055|ref|NP_218436.1| 16S rRNA methyltransferase GidB [Mycobacterium tuberculosis H37Rv]
gi|7387700|sp|O53597|RSMG_MYCTU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|2808704|emb|CAA16232.1| PROBABLE GLUCOSE-INHIBITED DIVISION PROTEIN B GID [Mycobacterium
tuberculosis H37Rv]
Length = 224
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + LV V W RH+ + + +L +D+GSG G PG+
Sbjct: 20 RRYAEALAGPGVERGLVGPREVGRLWDRHLLNCAVIGELLERGDRVVDIGSGAGLPGVPL 79
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+I ++ V L+E ++ LR +V ++ R +E + D +
Sbjct: 80 AIARPDLQ---VVLLEPLLRRTESLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVS 136
Query: 148 RALADLDTLLEYSFPWLYQ 166
RA+A LD L ++S P +
Sbjct: 137 RAVAALDKLTKWSMPLIRP 155
>gi|270284634|ref|ZP_05966436.2| 16S rRNA methyltransferase GidB [Bifidobacterium gallicum DSM
20093]
gi|270276574|gb|EFA22428.1| 16S rRNA methyltransferase GidB [Bifidobacterium gallicum DSM
20093]
Length = 267
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 68/188 (36%), Gaps = 33/188 (17%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ LR + LL +V L KL+ FY ++ L+ W RH+ +S V
Sbjct: 26 EDDELRDSALLA--DVFGPALPKLQAFYAKLEAEGEERGLIGPRDQNILWERHLLNSAAV 83
Query: 66 FQL------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
H D+GSGGGFPG++ + L LIE ++ +L ++
Sbjct: 84 VPFMRQAFDHAQFKTVADVGSGGGFPGLVAAAMLPEAR---FTLIEPMERRCVWLNECIE 140
Query: 120 KTAARGKVF-ACRIQEA---------------------PQMITTCDVISARALADLDTLL 157
V R +EA + V++ RA+A + L
Sbjct: 141 TMELNNTVVVRARAEEAIGALELAHGRKSKTPVPAEVTESIRHPFTVVTCRAVAPMTKLA 200
Query: 158 EYSFPWLY 165
++ P +
Sbjct: 201 AWTMPLVA 208
>gi|123969209|ref|YP_001010067.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. AS9601]
gi|166224602|sp|A2BT49|RSMG_PROMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|123199319|gb|ABM70960.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. AS9601]
Length = 237
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWI 76
++ E + + + + K NL + +D+W+ V DS+ F+ ++ ++
Sbjct: 14 ITEEEINLFQELQIKIKELNNKTNLTRLTDGDDYWVSQVFDSIWPFKAFTNINFDNKKFL 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQE 134
D+GSG GFPG+ +I + E + LI+S KK ++ +V++ + V R++
Sbjct: 74 DIGSGCGFPGLAYAITHPNSE---IYLIDSLKKKTDAIKILVEQINFKNNIHVINDRVEN 130
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
M ++ + RA+++ T+ EY P L ++
Sbjct: 131 LAHQSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|116672709|ref|YP_833642.1| 16S rRNA methyltransferase GidB [Arthrobacter sp. FB24]
gi|116612818|gb|ABK05542.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter sp. FB24]
Length = 228
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LE E + + L+ V W RHV + + + S D+GSG G
Sbjct: 30 DRLELAERYVEHLATSGTERGLIGPREVPRLWSRHVLNCAVIEREIARGSHVADVGSGAG 89
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ +I +E + LIE ++ +L+ VV E + D
Sbjct: 90 LPGLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLTNVTVMRTRAELAVGMVNAD 146
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
V++ARA++ L L + P L K
Sbjct: 147 VVTARAVSALSNLAGLTIPLLGGK 170
>gi|303327750|ref|ZP_07358190.1| methyltransferase GidB [Desulfovibrio sp. 3_1_syn3]
gi|302862111|gb|EFL85045.1| methyltransferase GidB [Desulfovibrio sp. 3_1_syn3]
Length = 261
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D + R +V LE L + + +W+ +NLV + + +D R V DS
Sbjct: 23 VDRKELARLAA-ATGADVPSAALEPLAVYLEMLCRWNAAMNLVGARSWQDILARLVADSF 81
Query: 64 RVFQLHPYPSIWI-----DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + DLGSG G PGI + G ++E + ++A FL ++
Sbjct: 82 HLASFLEELPLPEEPLSWDLGSGAGLPGIPLRMA---WTRGGYYMVEVRERRALFLSSIL 138
Query: 119 QKTAARG-KVFACRIQEAPQ-MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ VF ++ Q D I +RA LLE + P L +
Sbjct: 139 ARLQLSATHVFRGSVEHFFQGQYYQADCIVSRAFMPWPELLELTLPRLRPE 189
>gi|148261391|ref|YP_001235518.1| methyltransferase GidB [Acidiphilium cryptum JF-5]
gi|189039374|sp|A5G167|RSMG_ACICJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|146403072|gb|ABQ31599.1| 16S rRNA m(7)G-527 methyltransferase [Acidiphilium cryptum JF-5]
Length = 217
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDSLRVFQLHPYPS-IWID 77
VSRETL +LE F L L+W+ +INLVS + W RH+ DSL++ L P + D
Sbjct: 24 VSRETLSRLEAFAALILRWTARINLVSRKDAAPAEIWNRHILDSLQMLPLVPQGAFRAAD 83
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
LGSGGG PG++ +I I LIES +KA+FL+ + + V RI++A
Sbjct: 84 LGSGGGLPGLVLAIARPEI---GFTLIESDRRKAAFLQTAIAELKLNATVLPVRIEQARL 140
Query: 138 MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +++ARALA L L Y+ P L
Sbjct: 141 EPSP--LVTARALAALPVLFGYAAPLLAP 167
>gi|317509422|ref|ZP_07967040.1| glucose inhibited division protein [Segniliparus rugosus ATCC
BAA-974]
gi|316252251|gb|EFV11703.1| glucose inhibited division protein [Segniliparus rugosus ATCC
BAA-974]
Length = 225
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 22 SRETLEKL--------EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
S+E LE L + L+ E W RH+ +S V +L P +
Sbjct: 6 SQEMLEALFGDRAHLAIAYAEWLADVGVAAGLIGPREAERLWERHILNSAAVVELIPEGA 65
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
DLGSG G PGI +I + + L+E ++ ++ ++ V R +
Sbjct: 66 QAADLGSGAGLPGIPIAIARPDVR---MTLVEPLARRVDPVQKFLEDVGLDVGVLRARAE 122
Query: 134 --EAPQMITTCDVISARALADLDTLLEYS 160
EA +++ V+ +RA+A LDTL +S
Sbjct: 123 SSEARELLAPVPVVVSRAVAALDTLARWS 151
>gi|23465229|ref|NP_695832.1| 16S rRNA methyltransferase GidB [Bifidobacterium longum NCC2705]
gi|189440303|ref|YP_001955384.1| 16S rRNA methyltransferase GidB [Bifidobacterium longum DJO10A]
gi|312133637|ref|YP_004000976.1| gidb [Bifidobacterium longum subsp. longum BBMN68]
gi|317482353|ref|ZP_07941373.1| glucose inhibited division protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322692113|ref|YP_004221683.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
longum JCM 1217]
gi|29336746|sp|Q8G6J4|RSMG_BIFLO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|254766881|sp|B3DP27|RSMG_BIFLD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|23325858|gb|AAN24468.1| possible glucose inhibited division protein B [Bifidobacterium
longum NCC2705]
gi|189428738|gb|ACD98886.1| Putative S-adenosylmethionine-dependent methyltransferase for
bacterial cell division [Bifidobacterium longum DJO10A]
gi|311772895|gb|ADQ02383.1| GidB [Bifidobacterium longum subsp. longum BBMN68]
gi|316916233|gb|EFV37635.1| glucose inhibited division protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320456969|dbj|BAJ67591.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 221
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KLE F+ + + L+ V+ W RH+ +S + D
Sbjct: 17 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVAD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR----I 132
+GSGGGFPG++ + L + LIE ++ +L V + ++ R I
Sbjct: 77 VGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSDAVI 133
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q+ + I V++ RA+A + L ++ P L
Sbjct: 134 QQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|296455141|ref|YP_003662285.1| methyltransferase GidB [Bifidobacterium longum subsp. longum
JDM301]
gi|296184573|gb|ADH01455.1| methyltransferase GidB [Bifidobacterium longum subsp. longum
JDM301]
Length = 221
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KLE F+ + + L+ V+ W RH+ +S + D
Sbjct: 17 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVAD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR----I 132
+GSGGGFPG++ + L + LIE ++ +L V + ++ R I
Sbjct: 77 VGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVI 133
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q+ + I V++ RA+A + L ++ P L
Sbjct: 134 QQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|254526589|ref|ZP_05138641.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9202]
gi|221538013|gb|EEE40466.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9202]
Length = 237
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----YPSIWI 76
++ E + + + + K NL +D+WI V DS+ F+ P ++
Sbjct: 14 ITEEEINIFQELQIKIQELNNKTNLTRLIDGDDYWISQVFDSIWPFKAFPNINFNNKKFL 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--ACRIQ- 133
D+GSG GFPG+ +I + E + LI+S KK L+ ++++ + + R++
Sbjct: 74 DIGSGCGFPGLAYAITHPNSE---IYLIDSSKKKTDALKILIKEINFKNNIHIINDRVEN 130
Query: 134 --EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
M T ++ + RA+++ T+ EY P L ++
Sbjct: 131 LAHRSSMRNTFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|157414076|ref|YP_001484942.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9215]
gi|166989554|sp|A8G6X5|RSMG_PROM2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157388651|gb|ABV51356.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9215]
Length = 237
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWI 76
++ E + + + + K NL + +D+W+ V DS+ F+ ++ ++
Sbjct: 14 ITEEEINLFQELQIKIKELNNKTNLTRLTDGDDYWVSQVFDSIWPFKAFTNINFDNKKFL 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQE 134
D+GSG GFPG+ +I + E + LI+S KK ++++V++ + V R++
Sbjct: 74 DIGSGCGFPGLAYAITHPNSE---IYLIDSLKKKTDAIKFLVKQINFKNNIHVINDRVEN 130
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
M ++ + RA+++ T+ EY P L ++
Sbjct: 131 LAHQSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|239622849|ref|ZP_04665880.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514846|gb|EEQ54713.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 227
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KLE F+ + + L+ V+ W RH+ +S + D
Sbjct: 23 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR----I 132
+GSGGGFPG++ + L + LIE ++ +L V + ++ R I
Sbjct: 83 VGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVGLMQLQNVEIIRGRSDAVI 139
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q+ + I V++ RA+A + L ++ P L
Sbjct: 140 QQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 174
>gi|254458713|ref|ZP_05072137.1| methyltransferase GidB [Campylobacterales bacterium GD 1]
gi|207084479|gb|EDZ61767.1| methyltransferase GidB [Campylobacterales bacterium GD 1]
Length = 192
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSST---VEDFWIRHVEDSLRVF 66
L+A + + + ++ + KW+K NL + +++F + D++
Sbjct: 3 LKAILAQDNIILPDDFFYNIQKYKEHLFKWNKIHNLTGAKDSNSIDEF----IYDAVFPV 58
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P +D+G+G GFPG+I ++ L + V L+E K+ASFL+++
Sbjct: 59 SFLPKAKNLLDIGTGAGFPGMILALALPDTQ---VTLVEPLTKRASFLQFIKADLELDNV 115
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+V R+++ I D++++RA+ D LL S + +K
Sbjct: 116 RVVKKRVEDMEAEI--FDIVTSRAVTDTQMLLNLSKNFRDEK 155
>gi|320459522|dbj|BAJ70143.1| glucose-inhibited division protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 221
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KLE F+ + + L+ V+ W RH+ +S + D
Sbjct: 17 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVAD 76
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGGFPG++ + L + LIE ++ +L V + ++ R
Sbjct: 77 VGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVI 133
Query: 137 QMITT-----CDVISARALADLDTLLEYSFPWLYQ 166
Q + V++ RA+A + L ++ P L
Sbjct: 134 QQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 168
>gi|189039680|sp|A0K2M2|RSMG_ARTS2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 216
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ LE E + + L+ V W RHV + + + S D+GSG G
Sbjct: 18 DRLELAERYVEHLATSGTERGLIGPREVPRLWSRHVLNCAVIEREIARGSHVADVGSGAG 77
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ +I +E + LIE ++ +L+ VV E + D
Sbjct: 78 LPGLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLTNVTVMRTRAELAVGMVNAD 134
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
V++ARA++ L L + P L K
Sbjct: 135 VVTARAVSALSNLAGLTIPLLGGK 158
>gi|213693340|ref|YP_002323926.1| methyltransferase GidB [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524801|gb|ACJ53548.1| methyltransferase GidB [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 227
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KLE F+ + + L+ V+ W RH+ +S + D
Sbjct: 23 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNATNGIRFKTVAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGGFPG++ + L + LIE ++ +L V + ++ R
Sbjct: 83 VGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVI 139
Query: 137 QMITT-----CDVISARALADLDTLLEYSFPWLYQ 166
Q + V++ RA+A + L ++ P L
Sbjct: 140 QQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 174
>gi|317489237|ref|ZP_07947754.1| glucose inhibited division protein [Eggerthella sp. 1_3_56FAA]
gi|325832342|ref|ZP_08165341.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Eggerthella sp.
HGA1]
gi|316911638|gb|EFV33230.1| glucose inhibited division protein [Eggerthella sp. 1_3_56FAA]
gi|325486178|gb|EGC88632.1| 16S rRNA (guanine(527)-N(7))-methyltransferase [Eggerthella sp.
HGA1]
Length = 213
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
+ L+ L ++ +K N+ ST ++ + HV+DSL +D+GSG G+
Sbjct: 4 DLLKRHLELVIEANKTTNITRISTWDEGMLLHVQDSLVGLPELREAPEGRMVDIGSGAGY 63
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE-APQMITTC 142
PGI +I+ G L +S KK + L +VQ V+ RI++ A + +
Sbjct: 64 PGIPLAIE----SGRSTLLADSVGKKTTILASMVQTLGLDNVDVYTGRIEDLAREEPASF 119
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
++ARALA L L+E++ P L +
Sbjct: 120 AAVTARALAQLSILMEFASPLLQE 143
>gi|187251663|ref|YP_001876145.1| methyltransferase GidB [Elusimicrobium minutum Pei191]
gi|186971823|gb|ACC98808.1| Methyltransferase GidB [Elusimicrobium minutum Pei191]
Length = 202
Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKK--INLVSSSTVEDFWIRHVEDSLR----VFQLHPY 71
N++ + L + L W KK +NL S S+ E+ W RH+ D L+ V L
Sbjct: 12 NLNLTDGQMNALSAYVDLV--WDKKNSMNLTSVSSKEEIWGRHIADGLQFAKAVKDLGFE 69
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+GSG G+ G+ +I L LIES K+ FL + V K + +
Sbjct: 70 EGSFADIGSGAGYIGLAAAIALPKTNAA---LIESLEKRTIFLNWCVLKLDIKNVTILNE 126
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +A DV++ RA+ D +L ++
Sbjct: 127 RAGQAE--PEQYDVVTERAMGKFDDILPVCMEYVKD 160
>gi|257792844|ref|YP_003183450.1| methyltransferase GidB [Eggerthella lenta DSM 2243]
gi|257476741|gb|ACV57061.1| methyltransferase GidB [Eggerthella lenta DSM 2243]
Length = 213
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGF 84
+ L+ L ++ +K N+ ST ++ + HV+DSL +D+GSG G+
Sbjct: 4 DLLKRHLELVIEANKTTNITRISTWDEGMLLHVQDSLVGLPELREAPEGRMVDIGSGAGY 63
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE-APQMITTC 142
PGI +I+ G L +S KK + L +VQ V+ RI++ A + +
Sbjct: 64 PGIPLAIE----SGRSTLLADSVGKKTAILASMVQTLGLDNVDVYTGRIEDLAREEPASF 119
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
++ARALA L L+E++ P L +
Sbjct: 120 AAVTARALAQLSILMEFASPLLQE 143
>gi|291517737|emb|CBK71353.1| 16S rRNA m(7)G-527 methyltransferase [Bifidobacterium longum subsp.
longum F8]
Length = 227
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KLE F+ + + L+ V+ W RH+ +S + D
Sbjct: 23 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNMTNGIRFKTVAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR----I 132
+GSGGGFPG++ + L + LIE ++ +L V + ++ R I
Sbjct: 83 VGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVI 139
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q+ + I V++ RA+A + L ++ P L
Sbjct: 140 QQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 174
>gi|327395841|dbj|BAK13263.1| methyltransferase GidB [Pantoea ananatis AJ13355]
Length = 160
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RH+ DS+ V H S +ID+G+G G PGI +I + L++S K+ F
Sbjct: 1 MLVRHILDSIVVAP-HLQGSRFIDVGTGPGLPGIPLAIVMPEAH---FTLLDSLGKRVRF 56
Query: 114 LRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
LR V + + R++ P D + +RA A L+ ++ +
Sbjct: 57 LRQVQHELGLTNIEPVQSRVEAFPSE-PPFDGVISRAFASLEDMVSWCHHL 106
>gi|227547518|ref|ZP_03977567.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212033|gb|EEI79929.1| glucose-inhibited division protein B [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 227
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 15/155 (9%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KLE F+ + + L+ V+ W RH+ +S + D
Sbjct: 23 DALPKLERFHAKIAEEGEPRGLIGPRDVDIIWERHILNSAAIVPYVRNVTNGIRFKTVAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR----I 132
+GSGGGFPG++ + L + LIE ++ +L V + ++ R I
Sbjct: 83 VGSGGGFPGLVAAACLPDHD---FTLIEPMERRIEWLHECVDLMQLQNVEIIRGRSDAVI 139
Query: 133 QEA-PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
Q+ + I V++ RA+A + L ++ P L
Sbjct: 140 QQVRKREIHPFAVVTCRAVAPMTKLSGWTLPLLKP 174
>gi|296273205|ref|YP_003655836.1| methyltransferase GidB [Arcobacter nitrofigilis DSM 7299]
gi|296097379|gb|ADG93329.1| methyltransferase GidB [Arcobacter nitrofigilis DSM 7299]
Length = 194
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW 75
L N+ + L K E F W K NL S+ ++ +++ DS+ V +
Sbjct: 6 LEELNLGEDFLPKCEEFKKTLQHWGKVHNL-SAELEDEKIEKNIYDSIYVLKFIKDYKTV 64
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+G+G G+PG+I ++ +I+ LIE + K+ +FL ++ ++ R++
Sbjct: 65 ADIGTGAGYPGLILAMARPNIK---FYLIEPRAKRVAFLNFIKNSLKLDNIEILCNRVEY 121
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
+ D+I++RA+ + LL+ +
Sbjct: 122 VKDI--KVDLITSRAVTNTSLLLDLT 145
>gi|212703470|ref|ZP_03311598.1| hypothetical protein DESPIG_01514 [Desulfovibrio piger ATCC 29098]
gi|212673084|gb|EEB33567.1| hypothetical protein DESPIG_01514 [Desulfovibrio piger ATCC 29098]
Length = 222
Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 10/156 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----HPYP 72
V L L + L +W+K +NLV + D R V DS + P
Sbjct: 23 GVTVPEAALPGLAEYLQLLCRWNKAMNLVGAHHWRDAMQRLVADSFHLATFLDGLPLPED 82
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ DLGSG G P I + + G L+E++ K+A FL V+ + G VF R
Sbjct: 83 PLCWDLGSGAGLPAIPLRMA---WQRGTCWLVEAREKRALFLSTVLARVPLPGTHVFRGR 139
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ P+ D I++RA LLE P L
Sbjct: 140 VEHFFPKQARKADCITSRAFMPWPQLLELVAPHLAD 175
>gi|149199436|ref|ZP_01876472.1| glucose-inhibited division protein B [Lentisphaera araneosa
HTCC2155]
gi|149137514|gb|EDM25931.1| glucose-inhibited division protein B [Lentisphaera araneosa
HTCC2155]
Length = 223
Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--- 74
+ +K E Y + K ++ NL ++ EDF IRH+ DS+ +P +
Sbjct: 15 KIQLPEGFSQKAEEIYQVVTKINETHNLTRITSPEDFKIRHLIDSICSVAYYPELATESL 74
Query: 75 -WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+DLG GGGFP I S ++ + ++S+ K + + K R
Sbjct: 75 KILDLGCGGGFPCIPLSAYNPQLD---ITGLDSEGTKVKCVAQAASELGLSNLKTIHARG 131
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+E + D+++ARA+A D L++ +L K
Sbjct: 132 RELAIKEEHKAQYDIVTARAVATADKLIKECRQFLKPK 169
>gi|126697003|ref|YP_001091889.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9301]
gi|166224601|sp|A3PEW3|RSMG_PROM0 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|126544046|gb|ABO18288.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9301]
Length = 237
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIWI 76
++ E + + + + K N+ + +D+W+ V DS+ F+ ++ ++
Sbjct: 14 LTEEEINMFQELQIKIKELNNKTNITRLTDGDDYWVSQVFDSIWPFKAFTNINFDNKKFL 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQE 134
D+GSG GFPG+ +I + E + LI+S KK ++ +V+K + V RI+
Sbjct: 74 DIGSGCGFPGLAYAITHPNSE---IYLIDSLKKKTDAIKILVEKINFKNNIHVINDRIEN 130
Query: 135 APQM---ITTCDVISARALADLDTLLEYSFPWLYQK 167
++ + RA+++ T+ EY P L ++
Sbjct: 131 LAHHSSMRNNFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|160331514|ref|XP_001712464.1| hypothetical protein HAN_2g321 [Hemiselmis andersenii]
gi|159765912|gb|ABW98139.1| hypothetical protein HAN_2g321 [Hemiselmis andersenii]
Length = 247
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEY--------FYFLFLKWSKKINLVSSSTVE 52
M + N +YL N S +E F + +K INL+S T
Sbjct: 11 MVFSKLNGKEAKSYLTKKKNFSNNLVEFFRKENTNDTFFFTEQLVLTNKYINLISKKTEF 70
Query: 53 DFWIRHVEDSLRVF------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ + +H D+L + + + +D+G+G GFPG++ SI L L+ES
Sbjct: 71 NIYRKHFLDTLTIVIFFKCFEKKKKKNACVDIGTGSGFPGLLLSILLPE---SFFLLVES 127
Query: 107 KNKKASFLRYVVQKTAARGKV-FACRIQ---EAPQMITTCDVISARALADLDTLLEYSFP 162
KK+ F ++ + RI+ + + D ++ARA+++++ L+++S P
Sbjct: 128 IQKKSYFHGKIINFLFLNNSITLNSRIEGMGKLKEHRGNYDFLTARAVSEINPLIQFSCP 187
Query: 163 WLYQ 166
+ +
Sbjct: 188 LVKK 191
>gi|262040355|ref|ZP_06013601.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330005172|ref|ZP_08305134.1| 16S rRNA methyltransferase GidB [Klebsiella sp. MS 92-3]
gi|259042296|gb|EEW43321.1| 16S rRNA methyltransferase GidB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536378|gb|EGF62737.1| 16S rRNA methyltransferase GidB [Klebsiella sp. MS 92-3]
Length = 159
Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RH+ DS+ V S +ID+G+G G PGI +I L++S K+ F
Sbjct: 1 MLVRHILDSIIVAPYL-QGSRFIDVGTGPGLPGIPLAIVCPESH---FTLLDSLGKRVRF 56
Query: 114 LRYVVQKTAARGKV-FACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
LR V + R++ P D + +RA A L+ ++ +
Sbjct: 57 LRQVQHELKLDNVTPVQSRVEAFPAE-PPFDGVISRAFASLNDMVSWCHHL 106
>gi|119963842|ref|YP_949870.1| 16S rRNA methyltransferase GidB [Arthrobacter aurescens TC1]
gi|166224572|sp|A1RCA8|RSMG_ARTAT RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119950701|gb|ABM09612.1| methyltransferase GidB [Arthrobacter aurescens TC1]
Length = 216
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 3/141 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L+ + + + L+ + W RHV + + S D+GSG G
Sbjct: 18 ERLDLAKRYVEHLATSGTERGLIGPREIPRLWSRHVLNCAVIESAIAMDSHVADVGSGAG 77
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ +I +E + LIE ++ +L+ VV E + D
Sbjct: 78 LPGLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTIMRTRAELAVGMVDAD 134
Query: 144 VISARALADLDTLLEYSFPWL 164
V++ARA++ L L + P L
Sbjct: 135 VVTARAVSALSNLAGLTIPLL 155
>gi|319778789|ref|YP_004129702.1| Glucose inhibited division protein [Taylorella equigenitalis MCE9]
gi|317108813|gb|ADU91559.1| Glucose inhibited division protein [Taylorella equigenitalis MCE9]
Length = 223
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++L + +S +L + L LKW+K NL S D H+ D L +
Sbjct: 7 ALLEDGLKDLSLKLSDIEKGQLIEYINLLLKWNKTYNLTSIKNELDALKLHILDCLSIIN 66
Query: 68 LH----------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+D+GSGGG P I+ +I + + + +++ KK +F++ V
Sbjct: 67 PLRDFLNNKEGNTQTKTVVDVGSGGGLPAIVLAIVMKN---FSIYSVDAVEKKTAFVKAV 123
Query: 118 VQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
K RI+ + D+ +RA A LD + P
Sbjct: 124 ASTLKLSNLKSIHTRIENF-NIPEDIDIFISRAFASLDDYIGLVDPL 169
>gi|296395441|ref|YP_003660325.1| methyltransferase GidB [Segniliparus rotundus DSM 44985]
gi|296182588|gb|ADG99494.1| methyltransferase GidB [Segniliparus rotundus DSM 44985]
Length = 228
Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ L+ E W RH+ +S V +L P + DLGSG G PGI +
Sbjct: 23 AYAEWLADVGVAAGLIGPREAERLWERHILNSAAVAELIPAGAHAADLGSGAGLPGIPIA 82
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ--EAPQMITTCDVISAR 148
I S + + L+E ++ ++ ++ T+ V R + EA + + V+ +R
Sbjct: 83 IARSDVR---LTLVEPLARRVDPVQQFLRGTSLDVGVLRARAESAEAREHLAPIPVVLSR 139
Query: 149 ALADLDTLLEYSFPWL 164
A+A LDTL +S P L
Sbjct: 140 AVAALDTLARWSSPLL 155
>gi|320104128|ref|YP_004179719.1| methyltransferase GidB [Isosphaera pallida ATCC 43644]
gi|319751410|gb|ADV63170.1| methyltransferase GidB [Isosphaera pallida ATCC 43644]
Length = 505
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
S L A +S E + +L ++ L + ++NL E+ ++H DSL
Sbjct: 6 PSPEALAALLKRCGTPLSDEAIGRLWRYHRLLRAANPELNLTRIHQFENMVLKHYVDSLL 65
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V + P+ ID+G+G G PG+ + +E + L E + + FL VV +
Sbjct: 66 VTRFEALPTPLIDMGTGPGLPGVPLKLARPELE---LILAEPRGARVEFLERVVAELGLE 122
Query: 125 G-KVFACRIQEAPQMITTCDVISARALADLDTLLE 158
G +V +I T + RA+A + LE
Sbjct: 123 GVEVHPGKITRRYDRPTR--GVITRAVASIPETLE 155
>gi|325965290|ref|YP_004243196.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323471377|gb|ADX75062.1| 16S rRNA m(7)G-527 methyltransferase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 216
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+ + + + L+ + W RHV + + S D+GSG G
Sbjct: 18 DRLDLAKRYVEHLATSGTERGLIGPREIPRLWSRHVLNCAVIESEIAEGSHVADVGSGAG 77
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG+ +I +E + LIE ++ +L+ VV E D
Sbjct: 78 LPGLCLAIARPDLE---LTLIEPLERRVIWLQEVVDDLGLDNVTVMRTRAELAVGQVEAD 134
Query: 144 VISARALADLDTLLEYSFPWL 164
V++ARA++ L L + P L
Sbjct: 135 VVTARAVSALSNLAGLTIPLL 155
>gi|157825213|ref|YP_001492933.1| 16S rRNA methyltransferase GidB [Rickettsia akari str. Hartford]
gi|166224607|sp|A8GM00|RSMG_RICAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157799171|gb|ABV74425.1| glucose-inhibited division protein B [Rickettsia akari str.
Hartford]
Length = 191
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
VSRE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 2 EVSREIIEKLEIFQKLVKKWNKSINLVSGNTIHNFWQRHILDSLQLMQYIDNKEIHLVDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFPGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 62 GSGAGFPGIVLSIAG----VAKVSLIEADLRKCIFLEKASKISNNNIQIINQRIEKVA-- 115
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA + L+T+
Sbjct: 116 -IDCSILTCRAFSKLNTI 132
>gi|94496561|ref|ZP_01303137.1| glucose inhibited division protein B [Sphingomonas sp. SKA58]
gi|94423921|gb|EAT08946.1| glucose inhibited division protein B [Sphingomonas sp. SKA58]
Length = 214
Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+L + ++VSR T ++LE F + L + NL++ ST W RH+ DS ++ L
Sbjct: 7 KAWLRSHFDVSRGTWDQLERFVAILLSAMDEQNLIAESTRTQIWARHIVDSAQLLLLVEG 66
Query: 72 P--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVF 128
W+DLG+G G PG + + V +IE++ K+ FL V+ + VF
Sbjct: 67 AATGTWVDLGAGAGLPGAVIACLGKQP----VLMIEARRKRVDFLNAVIAELGLQHADVF 122
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R++ P M VISARA A LD LL +
Sbjct: 123 GGRVESVPAM--QAAVISARAYAPLDKLLHSALHL 155
>gi|46579661|ref|YP_010469.1| methyltransferase GidB [Desulfovibrio vulgaris str. Hildenborough]
gi|120602856|ref|YP_967256.1| glucose inhibited division protein [Desulfovibrio vulgaris DP4]
gi|81566895|sp|Q72CN3|RSMG_DESVH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|193806442|sp|A1VEG3|RSMG_DESVV RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|46449076|gb|AAS95728.1| methyltransferase GidB [Desulfovibrio vulgaris str. Hildenborough]
gi|120563085|gb|ABM28829.1| 16S rRNA m(7)G-527 methyltransferase [Desulfovibrio vulgaris DP4]
gi|311233459|gb|ADP86313.1| glucose inhibited division protein [Desulfovibrio vulgaris RCH1]
Length = 218
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV------FQLHPY 71
+ S LE + + L L W++ +NLV + T +D + V DSL + L P
Sbjct: 20 GFEPSPGMLEAIAGYLELLLHWNRSMNLVGTRTWQDTFHTLVVDSLHLAAFLDTLPLPPE 79
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
P +W DLG+G G PGI ++ + G ++E++ K+A FLR + + G VF
Sbjct: 80 PEVW-DLGAGAGLPGIPL---RAAWQRGNYTMVEAREKRAMFLRMALARHPLPGTNVFQG 135
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEY 159
R + D++ +RA LL++
Sbjct: 136 RAEAFMPSRPPADLVVSRAFMPWRELLDF 164
>gi|91070183|gb|ABE11104.1| putative glucose inhibited division protein B [uncultured
Prochlorococcus marinus clone HF10-11D6]
Length = 246
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 7 NSILRANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N + + N +++ + E + + + + K NL +D+W+ V DS+
Sbjct: 8 NEMKKQNIPEEIFSLITEEEIIMFQELQIKIKELNNKTNLTRLINGDDYWVSQVFDSIWP 67
Query: 66 FQLHP----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
F+ P ++D+GSG GFPG+ +I + E + L++S KK L+ +++
Sbjct: 68 FKTFPNFNFDNKKFLDIGSGCGFPGLAYAITHPNSE---IYLVDSSKKKTDALKALIKAI 124
Query: 122 AARG--KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
+ V RI+ M + ++ + RA+++ T+ EY P L ++
Sbjct: 125 NFKNNIHVINDRIENLAHQSLMRNSFNIATTRAVSNPSTVSEYILPMLKKE 175
>gi|312880835|ref|ZP_07740635.1| 16S rRNA m(7)G-527 methyltransferase [Aminomonas paucivorans DSM
12260]
gi|310784126|gb|EFQ24524.1| 16S rRNA m(7)G-527 methyltransferase [Aminomonas paucivorans DSM
12260]
Length = 229
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
L N+ R ++ +F L + + L + W HV D L P
Sbjct: 5 LTEPLNLLRRHEGEVRHFVALLATANTRARLTGPTDELVLWEDHVVDCAAALALLPQGGQ 64
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA---RGKVFACR 131
ID+G+GGG PG++ ++ + V L++S +K + + +VQ R +V R
Sbjct: 65 VIDVGTGGGLPGLVWALCRPDV---AVTLLDSVERKCALVGEMVQVLGLPPERVQVVCER 121
Query: 132 IQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ A + D+ SARA+ + L E P +
Sbjct: 122 SETFAARNREVFDLASARAVCEAGVLAEVLSPLVRP 157
>gi|300742662|ref|ZP_07072683.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa M567]
gi|300381847|gb|EFJ78409.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa M567]
Length = 210
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ V W RHV + V + + D+GSG G PG+
Sbjct: 25 QRYVEHLATTGIERGLIGPREVPRLWARHVLNCAAVQEYIAEGASVADVGSGAGLPGLCL 84
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISAR 148
+I + + LIE ++ +L VV+ + R ++A + DV++AR
Sbjct: 85 AIARPDL---SITLIEPLERRVIWLHEVVEDLGLENVKILRSRAEQAVGQVE-ADVVTAR 140
Query: 149 ALADLDTLLEYSFPWLY 165
A++ L L++ + P L
Sbjct: 141 AVSALVGLVDITLPILR 157
>gi|209526668|ref|ZP_03275192.1| methyltransferase GidB [Arthrospira maxima CS-328]
gi|209492904|gb|EDZ93235.1| methyltransferase GidB [Arthrospira maxima CS-328]
Length = 251
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VF 66
I + + S LE Y L ++++NL + FW +H+ DSLR V
Sbjct: 9 EIQSEGWETLGWIPSDRQLEMFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLRGVV 68
Query: 67 QLHPYPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
ID+G+G GFPG+ +I + + E V L++S KK +FL+ ++ +
Sbjct: 69 PWLSGDKLPLRVIDIGTGAGFPGVPIAIAIPTAE---VTLLDSTGKKIAFLQTLIPRLGL 125
Query: 124 RGKV-FACRIQEAPQ---MITTCDV 144
+ + R++ Q + D+
Sbjct: 126 ENAIPYLGRVEAIAQQSDHRQSYDL 150
>gi|302035746|ref|YP_003796068.1| methyltransferase GidB [Candidatus Nitrospira defluvii]
gi|300603810|emb|CBK40142.1| Methyltransferase GidB [Candidatus Nitrospira defluvii]
Length = 218
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
+++ S L A+ + ++S + + KW+K INL + + ++H
Sbjct: 6 IQFAKSLQSLAADLSSSIPDLS---ISYFFRYLVELKKWNKAINLTAIDDDREVLVKHFI 62
Query: 61 DSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS+ ++ + +D+G+G GFP + + V L++ KK +FLRYVV
Sbjct: 63 DSIAGLKVIDINDETELLDVGAGAGFPALPLKFVRPEL---SVELLDPNEKKGAFLRYVV 119
Query: 119 QKTAARGKVFA-CRIQE---APQMITTCDVISARAL 150
G A ++++ + D I RA
Sbjct: 120 GTLGLVGATVATAKLEDYASRGNVQARFDYIVVRAF 155
>gi|256829386|ref|YP_003158114.1| glucose inhibited division protein [Desulfomicrobium baculatum DSM
4028]
gi|256578562|gb|ACU89698.1| glucose inhibited division protein [Desulfomicrobium baculatum DSM
4028]
Length = 214
Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSIWI 76
++ + L + L +KW+ ++NLV +T + ++DS + L P P+ +
Sbjct: 21 LTDDQARLLSVYLGLLVKWNSRMNLVGPATWTEILDTLIQDSWHLADLLQTLAPQPAQTL 80
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
DLG+G G PGI + + G L+E + K+A F+ V R +V R++
Sbjct: 81 DLGAGAGLPGIPLRVF---WQQGDYYLVEPRQKRAIFMEQAVAHMKLPRTRVICARMEAL 137
Query: 136 PQMITTCDVISARALADLDTLL 157
P +I +RA LL
Sbjct: 138 PPARREAGLIVSRAFMPWQKLL 159
>gi|78776584|ref|YP_392899.1| glucose-inhibited division protein B [Sulfurimonas denitrificans
DSM 1251]
gi|123550792|sp|Q30TL7|RSMG_SULDN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78497124|gb|ABB43664.1| Glucose inhibited division protein [Sulfurimonas denitrificans DSM
1251]
Length = 193
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ L + ++ F KW+K NL + E+ + D++
Sbjct: 3 LKTALLELDTELPDTFFHHIQKFKEHLFKWNKIHNLTGAKD-ENTIDEFIYDAIYPITFL 61
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VF 128
P +D+G+G GFPG+I ++ L E V L+E K+ASFL+++ V
Sbjct: 62 PKCKNLLDIGTGAGFPGLILAMGLPETE---VTLVEPLAKRASFLQFIKADLGLSNVKVV 118
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
R+Q+ P I +++++RA+ D + LLE S
Sbjct: 119 QKRVQDMPSEI--FEIVTSRAVIDTNMLLELS 148
>gi|87198161|ref|YP_495418.1| methyltransferase GidB [Novosphingobium aromaticivorans DSM 12444]
gi|123491126|sp|Q2GC39|RSMG_NOVAD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|87133842|gb|ABD24584.1| 16S rRNA m(7)G-527 methyltransferase [Novosphingobium
aromaticivorans DSM 12444]
Length = 230
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY- 71
+L +V ++ +L + L L +++ NLV+ T+ W+RH+ DS ++ +
Sbjct: 11 AWLREVLHVDDASMSRLAHLVDLLLAENERQNLVARGTLPHVWVRHIVDSAQLLHVSRET 70
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
W+DLG+G GFPG++ + S V L++S+ + +L+ +V
Sbjct: 71 SGSGEWLDLGTGAGFPGLVIAAIQSD---RPVTLVDSRRLRTEWLQRAADALELSNVRVI 127
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
R+++ ISARA A LD LL S +
Sbjct: 128 LSRVEDLES--GAYAAISARAFAPLDKLLAISARF 160
>gi|163842271|ref|YP_001626676.1| 16S rRNA methyltransferase GidB [Renibacterium salmoninarum ATCC
33209]
gi|189040714|sp|A9WVP1|RSMG_RENSM RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|162955747|gb|ABY25262.1| methyltransferase [Renibacterium salmoninarum ATCC 33209]
Length = 215
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ V W RHV + V +L + D+GSG G PG+
Sbjct: 24 QRYVEHLATSGIERGLIGPREVPRLWDRHVLNCAVVVELIEIDATVADVGSGAGLPGLCL 83
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
++ + + LIE ++ ++L VV +V F R ++A + C V++A
Sbjct: 84 ALARPDL---SITLIEPLERRVTWLSEVVADLGLSDQVTLFRMRAEQAVDEV-NCSVVTA 139
Query: 148 RALADLDTLLEYSFPWLY 165
RA++ LD L + P L+
Sbjct: 140 RAVSALDKLAGLTIPLLH 157
>gi|291565702|dbj|BAI87974.1| putative glucose inhibited division protein B [Arthrospira
platensis NIES-39]
Length = 254
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VF 66
I + + S L+ Y L ++++NL + FW +H+ DSLR V
Sbjct: 12 EIQSEGWETLGWIPSDRQLQIFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLRGVA 71
Query: 67 QLHPYPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
ID+G+G GFPGI +I + E V L++S KK +FL+ +V +
Sbjct: 72 PWLSGDKLPLRVIDIGTGAGFPGIPIAIAIPQAE---VTLLDSTGKKIAFLQTLVPRLGL 128
Query: 124 RGKV-FACRIQEAPQ---MITTCDV 144
+ + R++ Q T D+
Sbjct: 129 ENAIPYLGRVEAIAQQSDHRQTYDL 153
>gi|300870717|ref|YP_003785588.1| methyltransferase GidB [Brachyspira pilosicoli 95/1000]
gi|300688416|gb|ADK31087.1| Methyltransferase, gidB (glucose- inhibited division protein B)
[Brachyspira pilosicoli 95/1000]
Length = 209
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
K+ + L + ++K IN+ + ++ F H+ DSL + ID+GSG G P I
Sbjct: 27 KIIDYASLVMDYNKNINITGAKDIQTFLDEHILDSLLALDVFRDYDNIIDVGSGAGVPSI 86
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+I + + L ESKNKK+ FL +K A + ++ D I++
Sbjct: 87 PLAIMYNDKK---FTLCESKNKKSDFLIIAKEKLHLTNINVASK--NVYELKEKYDTITS 141
Query: 148 RALADLDTLLE 158
RA +D+ TL+
Sbjct: 142 RAFSDIKTLIR 152
>gi|218885951|ref|YP_002435272.1| glucose inhibited division protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756905|gb|ACL07804.1| glucose inhibited division protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 258
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-----HPYPSI 74
+V + L + L +KW++ +NLV + T + + + DSL + + P
Sbjct: 26 SVPEAAQKSLAGYLELLMKWNRVMNLVGTHTWQATFRTLIVDSLHLARFLRTLPLPEAPE 85
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
DLG+G G PGI + + G +L++++ K+ FL V+ + G VF R++
Sbjct: 86 TWDLGAGAGLPGIPL---RAVWQAGTYHLVDAREKRTLFLSNVLARHPLPGTVVFRGRVE 142
Query: 134 EAPQMITTCDVISARALADLDTLLEY 159
E D + +RA +LE
Sbjct: 143 EFMPTRPKADCVVSRAFLPWPEVLEL 168
>gi|255326487|ref|ZP_05367569.1| 16S rRNA methyltransferase GidB [Rothia mucilaginosa ATCC 25296]
gi|255296527|gb|EET75862.1| 16S rRNA methyltransferase GidB [Rothia mucilaginosa ATCC 25296]
Length = 213
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L E + + L+ V W RHV + V + + D+GSG G
Sbjct: 22 ERLPLAERYVQHLATTGIERGLIGPREVPRLWARHVLNCAVVQEYIAPNASVADVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG+ +I ++ + LIE ++ +L VV+ V R ++A +
Sbjct: 82 LPGLCLAIARPDLK---LTLIEPLERRVIWLNEVVEDLGLENVTVLRSRAEQAVGAVE-A 137
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV++ARA++ L LL+ + P L
Sbjct: 138 DVVTARAVSALVGLLDITLPILR 160
>gi|225155702|ref|ZP_03724190.1| glucose-inhibited division protein B [Opitutaceae bacterium TAV2]
gi|224803496|gb|EEG21731.1| glucose-inhibited division protein B [Opitutaceae bacterium TAV2]
Length = 221
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWID 77
V+ + L L +W+ KINLVS +E+ H + +L + +D
Sbjct: 10 EVTPAQWDLLIRMSALHREWNAKINLVSRKDIENLEWHHYAPCIAAVKLLRLEAGATLLD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+GGGFPG+I + L +S KK + + + ++ R R
Sbjct: 70 VGTGGGFPGLILAALYPQAH---FTLADSVGKKITVVADIARRLGLRN--VEARNVRVEI 124
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
+ + D ++ RA+ L ++ P +
Sbjct: 125 LNRSYDFVTGRAVTSLPGFVQLVKPRVR 152
>gi|283458989|ref|YP_003363638.1| S-adenosylmethionine-dependent methyltransferase [Rothia
mucilaginosa DY-18]
gi|283135053|dbj|BAI65818.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Rothia mucilaginosa DY-18]
Length = 213
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L E + + L+ V W RHV + V + + D+GSG G
Sbjct: 22 ERLPLAERYVQHLATTGIERGLIGPREVPRLWARHVLNCAVVQEYIAPNASVADVGSGAG 81
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG+ +I ++ + LIE ++ +L VV+ V R ++A +
Sbjct: 82 LPGLCLAIARPDLK---LTLIEPLERRVIWLNEVVEDLGLENVTVLRSRAEQAVGAVE-A 137
Query: 143 DVISARALADLDTLLEYSFPWLY 165
DV++ARA++ L LL+ + P L
Sbjct: 138 DVVTARAVSALVGLLDITLPILR 160
>gi|86743217|ref|YP_483617.1| 16S rRNA methyltransferase GidB [Frankia sp. CcI3]
gi|123764289|sp|Q2J4A4|RSMG_FRASC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86570079|gb|ABD13888.1| 16S rRNA m(7)G-527 methyltransferase [Frankia sp. CcI3]
Length = 265
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 7/141 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ L + L+ + W RHV + + + P + +D+GSG G PGI
Sbjct: 26 ARYVELLATDGVERGLIGPRETDRLWDRHVLNCAVLADVVPVQADVVDVGSGAGLPGIPL 85
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQEA--PQMITTCDVI 145
++ + V L+E ++ FL VV + V R +A +
Sbjct: 86 ALARPDLR---VVLLEPMERRCRFLHEVVATIGLEDQISVVRGRAPDAGIGPDGRRFGIA 142
Query: 146 SARALADLDTLLEYSFPWLYQ 166
ARA+A L+ L FP L
Sbjct: 143 VARAVAPLERLGAILFPMLRP 163
>gi|71083058|ref|YP_265777.1| glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|123647185|sp|Q4FNR5|RSMG_PELUB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71062171|gb|AAZ21174.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 213
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVED--FWIRHVEDSL 63
I + LL NV RETL + + F + + ++KIN++S T ++ RH+ DS
Sbjct: 1 MEEIFKNYPLLKNQNVPRETLIEFDLFISMLQEENEKINIISKETAKNEVIRERHIVDSA 60
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKT 121
++ + S I D+GSGGG PGII SI + + + V+L E + K+SFLR V +
Sbjct: 61 QIIEFVDLNSNIITDIGSGGGMPGIIISIMIKNQKNLAKVHLYEKSHHKSSFLRKVSRDL 120
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+V I EA ++ + I ARA L +L+
Sbjct: 121 KLNTEVMQENIFEAEKLDSG--TIMARAFKPLPIILDL 156
>gi|78184194|ref|YP_376629.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CC9902]
gi|123581932|sp|Q3AZ92|RSMG_SYNS9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78168488|gb|ABB25585.1| Glucose inhibited division protein [Synechococcus sp. CC9902]
Length = 243
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--- 70
+ + S E +++L L +W++K+NL +D+WI V DSL
Sbjct: 11 WTALGWQPSTEQVDQLATLQTLLREWNEKVNLTRLVEGDDYWINQVFDSLWPLAHELKTP 70
Query: 71 -YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKV 127
P ID+G+GGGFPG+ +I L G + L++S +K + + + + R V
Sbjct: 71 HQPRTCIDVGTGGGFPGLAIAIALP---GSHMTLLDSVGRKTAAVEAMASRLGLADRVAV 127
Query: 128 FACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
RI+ D+ ARA+A + EY P L K
Sbjct: 128 RTERIETTGHDRACRGQFDLAMARAVAAAPVVAEYLVPLLKPK 170
>gi|67458510|ref|YP_246134.1| glucose-inhibited division protein B [Rickettsia felis URRWXCal2]
gi|75537023|sp|Q4UN89|RSMG_RICFE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|67004043|gb|AAY60969.1| Predicted S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia felis URRWXCal2]
Length = 192
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 3 EVPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLMQYIDNKEIHLVDI 62
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFPGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 63 GSGAGFPGIVLSIAG----VAKVSLIEADLRKCIFLEKASKISNNNIQIINQRIEKVE-- 116
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA + L+T+
Sbjct: 117 -IDCSILTCRAFSKLNTI 133
>gi|260904987|ref|ZP_05913309.1| 16S rRNA methyltransferase GidB [Brevibacterium linens BL2]
Length = 217
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ ++ W RH+ + V + + D+GSG G PGI
Sbjct: 31 QRYAQHLATTGIEWGLIGPREIDRLWTRHILNCGVVAEFIDDSDVVGDVGSGAGLPGIPI 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
++ + V LIE ++ +L+ VV A ++ R++E V+++R
Sbjct: 91 ALLRPEAQ---VVLIEPMERRVEWLKMVVDDLALDNVRIVRARVEELVDE-EMFTVVTSR 146
Query: 149 ALADLDTLLEYS 160
A+ + TL+E++
Sbjct: 147 AVKAMTTLIEWT 158
>gi|53802709|ref|YP_112543.1| glucose-inhibited division protein B [Methylococcus capsulatus str.
Bath]
gi|81823728|sp|Q60CS4|RSMG_METCA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53756470|gb|AAU90761.1| glucose-inhibited division protein B [Methylococcus capsulatus str.
Bath]
Length = 205
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
KW++ +L + + H+ DSL + + +D+G+G G PGI +I
Sbjct: 30 KWNRVYSLTAIEDPCEGVRLHLLDSLSIASFL-HGRRVLDVGTGPGLPGIPLAIVQPERR 88
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVISARALADLDTL 156
L++ KK F+R V + V RI+ D + ARA A L +
Sbjct: 89 ---FVLLDCNAKKIRFVRQAVIELGLANVVPVQARIESFTD-AEGFDCVLARAYASLAEI 144
Query: 157 LEYSFPWLY 165
+ P L
Sbjct: 145 WTDAAPLLR 153
>gi|116626940|ref|YP_829096.1| methyltransferase GidB [Candidatus Solibacter usitatus Ellin6076]
gi|122251262|sp|Q01NF9|RSMG_SOLUE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116230102|gb|ABJ88811.1| methyltransferase GidB [Candidatus Solibacter usitatus Ellin6076]
Length = 210
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
L ++ ++ NL + + I+H+ DS+ ++L +D GSG GFPGI
Sbjct: 26 ARHLDLIVETNQHFNLTRIVSPREAAIKHIADSVIPWRLFSGAPHVVDAGSGAGFPGIPL 85
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
++ L L+ES KKA F+ E +++ARA
Sbjct: 86 ALVLPETR---FTLLESTQKKARFIESAAADLGLANVEVRPDRAEDWLKTHRASIVTARA 142
Query: 150 LADL 153
+A L
Sbjct: 143 VAPL 146
>gi|160901811|ref|YP_001567392.1| methyltransferase GidB [Petrotoga mobilis SJ95]
gi|189040704|sp|A9BF05|RSMG_PETMO RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|160359455|gb|ABX31069.1| methyltransferase GidB [Petrotoga mobilis SJ95]
Length = 225
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWIDL 78
S E EK+ + + + + +NL + +T +D + + DSL + +D+
Sbjct: 4 SDEKAEKINKYIEMLI--NYPVNLTAYTTKKDAYENLILDSLIPIEAEDTFLNSKNIVDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE-AP 136
G+GGG PG++ +I E L++S +KK L+ +++ +F R ++ A
Sbjct: 62 GTGGGIPGLVWAIYFPEKE---FYLVDSVSKKIEALKIFIKELKITNVYLFCERAEDFAK 118
Query: 137 QMITTCDVISARALADLDTLLEYSFPWLY 165
D + +ALA D LEY P +
Sbjct: 119 THRDYFDFATCKALARSDIALEYLSPLVK 147
>gi|157737479|ref|YP_001490162.1| 16S rRNA methyltransferase GidB [Arcobacter butzleri RM4018]
gi|189039380|sp|A8EU69|RSMG_ARCB4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157699333|gb|ABV67493.1| glucose inhibited division protein B [Arcobacter butzleri RM4018]
Length = 194
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L+ N + E E F L +W NL T +D + + DSL
Sbjct: 1 MLQKLLEANNLKFEDKFYEDCEVFVKLLQQWGTIHNLSGRLTRDDIYEN-ILDSLYPLTF 59
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ D+G+G G+PG+I +I L + LIE + K+ SFL +V V
Sbjct: 60 IEKYESFADIGTGAGYPGLILAIALRDTKA---YLIEPRIKRVSFLNFVKATLKLDNLVV 116
Query: 129 AC-RIQEAPQMITTCDVISARALADLDTLLEYS 160
C R++E + D+I++RA+ + LL+ +
Sbjct: 117 LCNRVEEVKDL--QVDLITSRAVTNTSLLLDIT 147
>gi|152990107|ref|YP_001355829.1| 16S rRNA methyltransferase GidB [Nitratiruptor sp. SB155-2]
gi|189045869|sp|A6Q1W3|RSMG_NITSB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|151421968|dbj|BAF69472.1| glucose inhibited division protein B [Nitratiruptor sp. SB155-2]
Length = 181
Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGG 83
T EKL F L+W+K NL S + E+ ++ED+L Q P +D+G+G G
Sbjct: 3 TEEKLNIFTQKLLEWNKIHNLTGSKSEEEV-QENIEDALFALQFLPDTIQNALDIGTGAG 61
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTC 142
FPG++ +I + + L E + K+ASFL Y+ V+ R+++ +
Sbjct: 62 FPGLVLAIAMPKTQW---ILTEPRQKRASFLHYMKSILNLSNVIVYKKRVEQIEAV--PM 116
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
D+I++RA+ L++ S ++
Sbjct: 117 DLITSRAVMKTKDLIDLSKKFITP 140
>gi|111226211|ref|YP_717005.1| 16S rRNA methyltransferase GidB [Frankia alni ACN14a]
gi|122953628|sp|Q0RAP0|RSMG_FRAAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|111153743|emb|CAJ65501.1| Methyltransferase gidB (Glucose inhibited division protein B)
(partial match) [Frankia alni ACN14a]
Length = 262
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 7/141 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F L + L+ + W RHV + + ++ P + +D+GSG G PGI
Sbjct: 23 ERFTELLATAGVERGLIGPRETDRLWERHVINCGVLAEVVPEGADAVDVGSGAGLPGIPL 82
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEAPQMIT--TCDVI 145
++ + V L+E ++ FL+ VV V R +A V
Sbjct: 83 ALARPDVR---VVLLEPMERRCRFLQEVVAAVGLEEQVSVLRGRAPDAGIGPEGRRFGVA 139
Query: 146 SARALADLDTLLEYSFPWLYQ 166
ARA+A L+ L P L
Sbjct: 140 VARAVAPLERLGAILLPMLQP 160
>gi|91206166|ref|YP_538521.1| glucose-inhibited division protein B [Rickettsia bellii RML369-C]
gi|157826532|ref|YP_001495596.1| 16S rRNA methyltransferase GidB [Rickettsia bellii OSU 85-389]
gi|122425160|sp|Q1RGT2|RSMG_RICBR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|166224608|sp|A8GUR2|RSMG_RICB8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|91069710|gb|ABE05432.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia bellii RML369-C]
gi|157801836|gb|ABV78559.1| glucose-inhibited division protein B [Rickettsia bellii OSU 85-389]
Length = 192
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 8/139 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WID 77
+V E +EKL+ F L KW+K INL+S ++ ++FW RH+ DSL++ Q I +D
Sbjct: 2 IDVPHEVIEKLQIFQDLVQKWNKAINLISENSTQNFWKRHILDSLQLIQYINDKEIHLVD 61
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+GSG GFPGII SI +LIE+ +K FL + + ++ RI++
Sbjct: 62 IGSGAGFPGIILSIAG----VASTSLIEADLRKCIFLEKAAKISNNNIQIINQRIEKTE- 116
Query: 138 MITTCDVISARALADLDTL 156
+C++++ RA ++L+T+
Sbjct: 117 --ISCNILTCRAFSNLNTI 133
>gi|311112578|ref|YP_003983800.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa ATCC 17931]
gi|310944072|gb|ADP40366.1| 16S rRNA methyltransferase GidB [Rothia dentocariosa ATCC 17931]
Length = 210
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + L+ V W RHV + V + + D+GSG G PG+
Sbjct: 25 QRYVEHLATTGIERGLIGPREVPRLWARHVLNCAAVQEYIAEGASVADVGSGAGLPGLCL 84
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISAR 148
+I + + LIE ++ +L VV+ + R ++A + DV++AR
Sbjct: 85 AIARPDL---AITLIEPLERRVIWLHEVVEDLGLENVKILRSRAEQAIGQVD-ADVVTAR 140
Query: 149 ALADLDTLLEYSFPWLY 165
A++ L L++ + P L
Sbjct: 141 AVSALVGLVDITLPILR 157
>gi|170288026|ref|YP_001738264.1| methyltransferase GidB [Thermotoga sp. RQ2]
gi|193806454|sp|B1L800|RSMG_THESQ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|170175529|gb|ACB08581.1| methyltransferase GidB [Thermotoga sp. RQ2]
Length = 228
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+EK++ + L NL + ++ ++V + L + +D
Sbjct: 12 GLRFQEPQIEKVDKYIEELL--GVPYNLTAHRDLDSAVHKNVVEILLPLK-EELKGTLLD 68
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA- 135
+GSG G PG+I +I ++ V L++S+ K +FLR V++K R +
Sbjct: 69 VGSGNGVPGLILAIFFPKLK---VVLLDSREKSVNFLRGVIEKLDLGNVSAVKERAENFS 125
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A L+ L+E P L
Sbjct: 126 RERREEFDYVTARAVARLNVLVEICTPALK 155
>gi|284052796|ref|ZP_06383006.1| 16S rRNA methyltransferase GidB [Arthrospira platensis str. Paraca]
Length = 192
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VF 66
I + + S L+ Y L ++++NL + FW +H+ DSLR V
Sbjct: 12 EIQSEGWETLGWIPSDRQLQIFNVLYEQILAGNQRLNLTRITDPVGFWEKHLWDSLRGVA 71
Query: 67 QLHPYPS---IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
ID+G+G GFPGI +I + E V L++S KK +FL+ +V +
Sbjct: 72 PWLSGDKLPLRVIDIGTGAGFPGIPIAIAIPQAE---VTLLDSTGKKIAFLQALVPRLGL 128
Query: 124 RGKV-FACRIQEAPQ---MITTCDV 144
+ + R++ Q T D+
Sbjct: 129 ENAIPYLGRVEAIAQQSDHRQTYDL 153
>gi|258405442|ref|YP_003198184.1| methyltransferase GidB [Desulfohalobium retbaense DSM 5692]
gi|257797669|gb|ACV68606.1| methyltransferase GidB [Desulfohalobium retbaense DSM 5692]
Length = 219
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-----PY 71
+ Y +S E L + L +W+ +INLV + V DS + L P+
Sbjct: 20 SGYEISEVQAELLAVYLRLLEQWNTRINLVGPRKWPQMLSQLVADSWHLAALLQELQWPH 79
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
+DLG+G G PGI + G L+E + K+ +FL + + G +
Sbjct: 80 QCQSLDLGAGAGLPGIPLRLF---WTHGRYTLVEIRQKRVAFLHNALAQMELPGTAIHHG 136
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +E P+ + ++ +RA LL + L +
Sbjct: 137 RAEELPETLLPAHLVLSRAFMPWHQLLPLAGSLLDK 172
>gi|303233445|ref|ZP_07320113.1| putative 16S rRNA methyltransferase GidB [Atopobium vaginae
PB189-T1-4]
gi|302480453|gb|EFL43545.1| putative 16S rRNA methyltransferase GidB [Atopobium vaginae
PB189-T1-4]
Length = 324
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 72/191 (37%), Gaps = 33/191 (17%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D + A VS + L Y L ++ +K INL + I H DSL
Sbjct: 66 DFKQLFLAFTEPFNVPVSNAQITALYKHYSLLVETNKSINLTRITEPLAALILHYVDSLF 125
Query: 65 VFQLHPYPS---------------------------IWIDLGSGGGFPGIITSIQLSSIE 97
V H +IDLG+G GFPGI ++ +
Sbjct: 126 VVHAHNTLCATGMIVRGTAGSEASSALQQISHGSLVSFIDLGTGAGFPGIPFAL----LT 181
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFAC--RIQEAPQMITTCDVISARALADLDT 155
G L++S KK + + + V R ++ P + +I ARA+A + T
Sbjct: 182 GKSGLLVDSVKKKIACVSSFIDALDLSSSVTTSSMRFEDLPSLGYKTPLIIARAVAPIRT 241
Query: 156 LLEYSFPWLYQ 166
LLEY+ P L +
Sbjct: 242 LLEYAAPLLTR 252
>gi|258593685|emb|CBE70026.1| putative Methyltransferase gidB (Glucose-inhibited division protein
B) [NC10 bacterium 'Dutch sediment']
Length = 249
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 9/169 (5%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D + +L ++ E + + +W+ +INL + E SL
Sbjct: 21 ADRSELLTRGLDRIGLQLTPAQREAFDIYLSELRRWASQINLTGLRSEEAIIREGFLRSL 80
Query: 64 RV-FQLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P PS+ ID+GSG GFPG++ + IE + L+E + K+A+FLR +++
Sbjct: 81 AHRAAFEPAPSVKAIDVGSGAGFPGLVLKMGYPDIE---IVLLEPRRKRAAFLRSTIRRL 137
Query: 122 AARG-KVFACRIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G + R++ + V ARA+ + + P L
Sbjct: 138 ELTGVRCIQARVEALYGDAEHQGRYAVAFARAVGPVADVARMIKPLLTP 186
>gi|210634759|ref|ZP_03298287.1| hypothetical protein COLSTE_02214 [Collinsella stercoris DSM 13279]
gi|210158699|gb|EEA89670.1| hypothetical protein COLSTE_02214 [Collinsella stercoris DSM 13279]
Length = 256
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFPGIITSIQL 93
L + ++ +NL + + + HV DSL + L P ++D+G+G GFPGI ++
Sbjct: 53 LVNQVNQYMNLTRIKDIHEALVLHVVDSLALTCDLPIEPERFLDMGTGAGFPGIPFAVYT 112
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ-EAPQMITTCDVISARALA 151
G L++S KK + + + + R + A + DV+ ARA+
Sbjct: 113 ----GCEGILLDSVRKKVNAVNAFIDELGISNAHSVHERCESYALNEAASFDVVFARAVG 168
Query: 152 DLDTLLEYSFPWL 164
++ ++EY P+L
Sbjct: 169 QMNLIVEYGAPFL 181
>gi|148269368|ref|YP_001243828.1| methyltransferase GidB [Thermotoga petrophila RKU-1]
gi|166224627|sp|A5IJ79|RSMG_THEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147734912|gb|ABQ46252.1| methyltransferase GidB [Thermotoga petrophila RKU-1]
Length = 228
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+EK++ + L NL + ++ ++V + L + +D
Sbjct: 12 GLRFQEPQIEKVDKYIEELL--GVPYNLTAHRDLDSAVHKNVVEILLPLK-EELKGTLLD 68
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA- 135
+GSG G PG+I +I S ++ V L++S+ K +FLR V++K V R +
Sbjct: 69 VGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLENVSVVKERAENFS 125
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A L+ L+E P L
Sbjct: 126 KERREEFDYVTARAVARLNVLVEICTPALK 155
>gi|154486338|ref|ZP_02027745.1| hypothetical protein BIFADO_00147 [Bifidobacterium adolescentis
L2-32]
gi|154084201|gb|EDN83246.1| hypothetical protein BIFADO_00147 [Bifidobacterium adolescentis
L2-32]
Length = 247
Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 37/195 (18%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D N L + +L V + L KL+ F+ + L+ V W RH+ +S
Sbjct: 5 SDVNDELDGSPILE--EVLGDALGKLKVFHVKLAAEGEPRGLIGPRDVGIIWERHILNSA 62
Query: 64 RVFQLHPYP------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ D+GSGGGFPGI+ + L + L+E ++ +L
Sbjct: 63 AIVPFIREATAKRQFKTVADIGSGGGFPGIVAAACLPDHQ---FTLVEPMERRIEWLHEC 119
Query: 118 VQKTAARGKVFA-------------------CRIQEAPQM-------ITTCDVISARALA 151
V + R ++A + V++ RA+A
Sbjct: 120 VDEMGLDNVSIVRSRANAVIEAVRGSNGGRKGRGEDAVDLDGNPIPVRHPFAVVTCRAVA 179
Query: 152 DLDTLLEYSFPWLYQ 166
+ L ++ P L +
Sbjct: 180 PMTKLSGWTLPLLDK 194
>gi|119026644|ref|YP_910489.1| 16S rRNA methyltransferase GidB [Bifidobacterium adolescentis ATCC
15703]
gi|189039483|sp|A1A3X4|RSMG_BIFAA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118766228|dbj|BAF40407.1| methyltransferase gidB [Bifidobacterium adolescentis ATCC 15703]
Length = 249
Score = 117 bits (295), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 68/195 (34%), Gaps = 37/195 (18%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
D N L + +L V + L KL+ F+ + L+ V W RH+ +S
Sbjct: 7 SDVNDELDGSPILE--EVLGDALGKLKVFHVKLAAEGEPRGLIGPRDVGIIWERHILNSA 64
Query: 64 RVFQLHPYP------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ D+GSGGGFPGI+ + L + L+E ++ +L
Sbjct: 65 AIVPFIREATAKRQFKTVADIGSGGGFPGIVAAACLPDHQ---FTLVEPMERRIEWLHEC 121
Query: 118 VQKTAARGKVFA-------------------CRIQEAPQM-------ITTCDVISARALA 151
V + R ++A + V++ RA+A
Sbjct: 122 VDEMGLDNVSIVRSRANAVIEAVRGSNGGRKGRGEDAVDLDGNPIPVRHPFAVVTCRAVA 181
Query: 152 DLDTLLEYSFPWLYQ 166
+ L ++ P L +
Sbjct: 182 PMTKLSGWTLPLLDK 196
>gi|328943463|ref|ZP_08240928.1| glucose inhibited division protein B [Atopobium vaginae DSM 15829]
gi|327491432|gb|EGF23206.1| glucose inhibited division protein B [Atopobium vaginae DSM 15829]
Length = 284
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSL------RVFQLHPYPSIWIDLGSGGGFPGIIT 89
+++K NL + + H DSL + ++ +DLG+G GFPGI
Sbjct: 77 MREYNKITNLTRITDTWSALVLHYLDSLLNILVMQNLNINLQTQTILDLGTGAGFPGIPL 136
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--ACRIQEA-PQMITTCDVIS 146
SI+L + L +S KK FL + + + G ++ R++E PQ +I
Sbjct: 137 SIKLPK----KLVLCDSVGKKTKFLSHYIAENRIDGPIYIENKRVEELSPQYDHQFTLIV 192
Query: 147 ARALADLDTLLEYSFPWL 164
RA+A L LLEY+ P L
Sbjct: 193 TRAVAQLSILLEYASPLL 210
>gi|15643470|ref|NP_228516.1| glucose-inhibited division protein B [Thermotoga maritima MSB8]
gi|7387702|sp|Q9WZG6|RSMG_THEMA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|4981231|gb|AAD35789.1|AE001742_4 glucose-inhibited division protein B [Thermotoga maritima MSB8]
Length = 238
Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+EK++ + L NL + ++ ++V + L + +D
Sbjct: 22 GLRFQEPQIEKVDKYIEELL--GVPYNLTAHRDLDSAVHKNVVEILLPLK-EELKGTLLD 78
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA- 135
+GSG G PG+I +I S ++ V L++S+ K +FLR V++K V R +
Sbjct: 79 VGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLENVSVVKERAENFS 135
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A L+ L+E P L
Sbjct: 136 KERREEFDYVTARAVARLNVLVEICTPALK 165
>gi|312200973|ref|YP_004021034.1| methyltransferase GidB [Frankia sp. EuI1c]
gi|311232309|gb|ADP85164.1| methyltransferase GidB [Frankia sp. EuI1c]
Length = 251
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
L+ + L + L+ E W RH+ + V + + +D+GSG G
Sbjct: 18 ALDDAIRYAELLATAGVERGLIGPRETERLWDRHLLNCAVVAEAVGPDATVVDVGSGAGL 77
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQEAPQMIT-- 140
PG+ ++ + V +E ++ FLR VV+ A + V R +A
Sbjct: 78 PGVPLALARPDLR---VVFLEPMERRCVFLREVVEALGATSRMSVLRGRAPDAGMGRDGL 134
Query: 141 TCDVISARALADLDTLLEYSFPWLYQ 166
DV ARA+A L+ L P +
Sbjct: 135 RWDVAVARAVAPLERLGGMLLPVVQP 160
>gi|315637202|ref|ZP_07892423.1| methyltransferase GidB [Arcobacter butzleri JV22]
gi|315478508|gb|EFU69220.1| methyltransferase GidB [Arcobacter butzleri JV22]
Length = 194
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 7/153 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L+ N + E E F L +W NL T +D + + DSL
Sbjct: 1 MLQKLLEANNLKFEDKFYEDCEVFVKLLQQWGTIHNLSGRLTRDDIYEN-ILDSLYPLTF 59
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ D+G+G G+PG+I +I L + LIE + K+ SFL +V V
Sbjct: 60 IEKYESFADIGTGAGYPGLILAIALRDTKA---YLIEPRIKRVSFLNFVKATLKLDNLVV 116
Query: 129 AC-RIQEAPQMITTCDVISARALADLDTLLEYS 160
C R++E + D+I++RA+ + LL+ +
Sbjct: 117 LCNRVEEVKDL--HVDLITSRAVTNTSLLLDIT 147
>gi|308234066|ref|ZP_07664803.1| methyltransferase GidB [Atopobium vaginae DSM 15829]
Length = 281
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVEDSL------RVFQLHPYPSIWIDLGSGGGFPGIIT 89
+++K NL + + H DSL + ++ +DLG+G GFPGI
Sbjct: 74 MREYNKITNLTRITDTWSALVLHYLDSLLNILVMQNLNINLQTQTILDLGTGAGFPGIPL 133
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--ACRIQEA-PQMITTCDVIS 146
SI+L + L +S KK FL + + + G ++ R++E PQ +I
Sbjct: 134 SIKLPK----KLVLCDSVGKKTKFLSHYIAENRIDGPIYIENKRVEELSPQYDHQFTLIV 189
Query: 147 ARALADLDTLLEYSFPWL 164
RA+A L LLEY+ P L
Sbjct: 190 TRAVAQLSILLEYASPLL 207
>gi|281411935|ref|YP_003346014.1| methyltransferase GidB [Thermotoga naphthophila RKU-10]
gi|281373038|gb|ADA66600.1| methyltransferase GidB [Thermotoga naphthophila RKU-10]
Length = 228
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
+EK++ + L NL + ++ ++V + L + +D
Sbjct: 12 GLRFQEPQIEKVDKYIEELL--GVPYNLTAHRDLDSAVHKNVVEILLPLK-EELKGTLLD 68
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA- 135
+GSG G PG+I +I S ++ V L++S+ K +FLR V++K V R +
Sbjct: 69 VGSGNGVPGLILAIFFSKLK---VVLLDSREKSVNFLRGVIEKLDLENVSVVKERAENFS 125
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
+ D ++ARA+A L+ L+E P L
Sbjct: 126 RERREEFDYVTARAVARLNVLVEICTPALK 155
>gi|183602662|ref|ZP_02964026.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis HN019]
gi|241191628|ref|YP_002969022.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|183218080|gb|EDT88727.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis HN019]
gi|240250020|gb|ACS46960.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|289177763|gb|ADC85009.1| GidB [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794620|gb|ADG34155.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis V9]
Length = 247
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 63/192 (32%), Gaps = 50/192 (26%)
Query: 22 SRETLEK--------------LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S E +E+ + FY + L+ V+ W RH+ +S V
Sbjct: 6 SDEQIEQSGILETIFGDALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVP 65
Query: 68 LHPYPSI------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ D+GSGGGFPG++ + L LIE ++ +L V+
Sbjct: 66 FIRQATSGKQFRSVADIGSGGGFPGLVAAAMLPD---HTFTLIEPMERRCEWLSECVETM 122
Query: 122 AARGK-VFACRIQEA--------------------------PQMITTCDVISARALADLD 154
+ R +EA + V++ RA+A +
Sbjct: 123 GLENVQIVRARSEEAIAALEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMT 182
Query: 155 TLLEYSFPWLYQ 166
L ++ P +
Sbjct: 183 KLTGWTLPLVAP 194
>gi|32475118|ref|NP_868112.1| glucose inhibited division protein B (GidB) [Rhodopirellula baltica
SH 1]
gi|55976485|sp|Q7UMW0|RSMG_RHOBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|32445658|emb|CAD75664.1| probable glucose inhibited division protein B (GidB)
[Rhodopirellula baltica SH 1]
Length = 231
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + +++++INL +T + F R + D L++ QL +D+GSG G PGI
Sbjct: 25 LQQYAQSLWRYNEQINLTRHTTWDLFVTRDLRDCLQLAQLIQPGEEVLDMGSGNGVPGIP 84
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ I+ V L ES K+A L +V + V+A R ++ + I +R
Sbjct: 85 LAMLRPDID---VALAESVGKRAKVLDELVTELNLPVPVYAARGEDLLEDF-RFTTIVSR 140
Query: 149 ALADLDTLLEYSFP 162
A+ L + P
Sbjct: 141 AVGSLLKFCRWVEP 154
>gi|241197033|ref|YP_002970588.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|240251587|gb|ACS48526.1| glucose-inhibited division protein B [Bifidobacterium animalis
subsp. lactis DSM 10140]
Length = 247
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 61/176 (34%), Gaps = 36/176 (20%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------WID 77
+ L K+ FY + L+ V+ W RH+ +S V + D
Sbjct: 22 DALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVPFIRQATSGKQFRSVAD 81
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA- 135
+GSGGGFPG++ + L LIE ++ +L V+ + R +EA
Sbjct: 82 IGSGGGFPGLVAAAMLPD---HTFTLIEPMERRCEWLSECVETMGLENVQIVRARSEEAI 138
Query: 136 -------------------------PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V++ RA+A + L ++ P +
Sbjct: 139 AALEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMTKLTGWTLPLVAP 194
>gi|15892008|ref|NP_359722.1| glucose-inhibited division protein B [Rickettsia conorii str.
Malish 7]
gi|229586297|ref|YP_002844798.1| 16S rRNA methyltransferase GidB [Rickettsia africae ESF-5]
gi|20138266|sp|Q92JI2|RSMG_RICCN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|259495619|sp|C3PM95|RSMG_RICAE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|15619123|gb|AAL02623.1| glucose inhibited division protein B [Rickettsia conorii str.
Malish 7]
gi|228021347|gb|ACP53055.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia africae ESF-5]
Length = 192
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 3 EVPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDI 62
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG G PGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 63 GSGSGLPGIVLSIAG----VAQVSLIEADLRKCIFLEKASKISNNNIQIINQRIEKVE-- 116
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 117 -IDCSILTCRAFSNLNTI 133
>gi|327539004|gb|EGF25639.1| glucose inhibited division protein B (GidB) [Rhodopirellula baltica
WH47]
Length = 231
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + +++++INL +T + F R + D L++ QL +D+GSG G PGI
Sbjct: 25 LQQYAQSLWRYNEQINLTRHTTWDLFVTRDLRDCLQLAQLIQPGEEVLDMGSGNGVPGIP 84
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ I+ V L ES K+A L +V + V+A R ++ + I +R
Sbjct: 85 LAMLRPDID---VALAESVGKRAKVLDELVTELNLPVPVYAARGEDLLEDF-RFTTIVSR 140
Query: 149 ALADLDTLLEYSFP 162
A+ L + P
Sbjct: 141 AVGSLLKFCRWVEP 154
>gi|34580956|ref|ZP_00142436.1| glucose inhibited division protein B [Rickettsia sibirica 246]
gi|28262341|gb|EAA25845.1| glucose inhibited division protein B [Rickettsia sibirica 246]
Length = 191
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 2 EVPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG G PGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 62 GSGSGLPGIVLSIAG----VAQVSLIEADLRKCIFLEKASKISNNNIQIINQRIEKVE-- 115
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 116 -IDCSILTCRAFSNLNTI 132
>gi|51245135|ref|YP_065019.1| glucose inhibited division protein B [Desulfotalea psychrophila
LSv54]
gi|81642450|sp|Q6ANR2|RSMG_DESPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50876172|emb|CAG36012.1| related to glucose inhibited division protein B [Desulfotalea
psychrophila LSv54]
Length = 217
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSS-STVEDFWIRHVEDSLRVFQL 68
L + R E+L ++ KWS+K+NL++ + + H DSL + L
Sbjct: 9 LSRGCQAMGIELDRPGQERLYTYFVELKKWSQKVNLIAKGTGEAEIVENHFLDSLALLPL 68
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
P + +D+G+G G PG+I + + L+E + K+ SFLR++V+ G ++
Sbjct: 69 LPEGAGLLDIGTGAGLPGLICKAARPDLR---LFLVEPRAKRVSFLRHIVRTLQLEGVEI 125
Query: 128 FACRIQEAPQMITTCDV--ISARALADLDTLLEYS 160
+ RI++ P++ + D+ I++RA++D+ L +
Sbjct: 126 YCSRIEDEPELFASEDISYITSRAVSDISGFLAMT 160
>gi|219684023|ref|YP_002470406.1| 16S rRNA methyltransferase GidB [Bifidobacterium animalis subsp.
lactis AD011]
gi|219621673|gb|ACL29830.1| methyltransferase GidB [Bifidobacterium animalis subsp. lactis
AD011]
Length = 243
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 61/176 (34%), Gaps = 36/176 (20%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI------WID 77
+ L K+ FY + L+ V+ W RH+ +S V + D
Sbjct: 18 DALPKVRAFYEKLKSEGEPRGLIGPRDVDILWERHLLNSAAVVPFIRQATSGKQFRSVAD 77
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA- 135
+GSGGGFPG++ + L LIE ++ +L V+ + R +EA
Sbjct: 78 IGSGGGFPGLVAAAMLPD---HTFTLIEPMERRCEWLSECVETMGLENVQIVRARSEEAI 134
Query: 136 -------------------------PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ V++ RA+A + L ++ P +
Sbjct: 135 AALEQARGKSSGRGHAKNTVTPEVAQAIRHPFTVVTCRAVAPMTKLTGWTLPLVAP 190
>gi|78779952|ref|YP_398064.1| methyltransferase GidB [Prochlorococcus marinus str. MIT 9312]
gi|123553754|sp|Q318R7|RSMG_PROM9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78713451|gb|ABB50628.1| 16S rRNA m(7)G-527 methyltransferase [Prochlorococcus marinus str.
MIT 9312]
Length = 237
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----YPSIWI 76
+++E + + + + K NL +D+WI V DS+ F+ P ++
Sbjct: 14 ITKEEIVMFQELQIKIAELNNKTNLTRLIKGDDYWISQVFDSIWPFKTFPNINFDNKKFL 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--ACRIQE 134
D+GSG GFPG+ +I + E + LI+S KK L+ ++++ + + RI+
Sbjct: 74 DIGSGCGFPGLAYAITHPNSE---IYLIDSSKKKTDALKLLIKEINFKNNIHIINDRIEN 130
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQK 167
M + ++ + RA+++ T+ EY P L ++
Sbjct: 131 LAHQSSMRNSFNIATTRAVSNPSTVSEYILPMLKKE 166
>gi|91762516|ref|ZP_01264481.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718318|gb|EAS84968.1| Glucose inhibited division protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 213
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVED--FWIRHVEDSL 63
I + LL NV RETL + F + ++KIN++S T ++ RH+ DS
Sbjct: 1 MEEIFKNYPLLKNQNVPRETLIDFDLFISMLQTENEKINIISKETAKNKVIRDRHIIDSA 60
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKT 121
++ + S I D+GSGGG PGII SI + + + V+L E + K+SFLR V +
Sbjct: 61 QIIEFVDLNSSIITDIGSGGGMPGIIISIMIKNQKNSTKVHLYEKSHHKSSFLRKVSRDL 120
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+V I EA + + I ARA L +L+
Sbjct: 121 KLNTEVMQENIFEAENLDSG--TIMARAFKPLPIILDL 156
>gi|85375439|ref|YP_459501.1| glucose inhibited division protein B [Erythrobacter litoralis
HTCC2594]
gi|122543370|sp|Q2N6I7|RSMG_ERYLH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|84788522|gb|ABC64704.1| glucose inhibited division protein B [Erythrobacter litoralis
HTCC2594]
Length = 207
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDLGSGGGF 84
+E++E +++ NLVS ++ + W RH+ DS ++ +W+DLGSG GF
Sbjct: 21 MERIEALVAALRSENERQNLVSKGSLGEVWQRHIADSAQLLDHVSRETGLWLDLGSGAGF 80
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
PG++ + V L+ES+ K+ +L +V+ A E + V
Sbjct: 81 PGLVVAAMQPEKP---VLLVESRRKRVEWLTDMVKALKLENCDVAGMRLELLEARE-AGV 136
Query: 145 ISARALADLDTLLEYSFPW 163
ISARA A L+ LL S +
Sbjct: 137 ISARAFAPLEKLLRLSARF 155
>gi|262200037|ref|YP_003271246.1| methyltransferase GidB [Haliangium ochraceum DSM 14365]
gi|262083384|gb|ACY19353.1| methyltransferase GidB [Haliangium ochraceum DSM 14365]
Length = 211
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
S L A +S L + L KW++KINL S E HV D L + +
Sbjct: 7 SYLGAADATAGRALSEPERGALCAYLELLAKWNRKINLTGSREPEALAA-HVVDCLALLR 65
Query: 68 LHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
P ++ +D+GSG G PG + + + +E V +E +KK +FL V ++
Sbjct: 66 HIPADAVQAVDVGSGAGLPGAVVAALMPGLE---VTALEPIHKKHAFLSAVRRELGLDNL 122
Query: 126 KVFACRIQEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQ 166
+ A R +E D+ +RA L L+ +
Sbjct: 123 RPLAQRAEEHRDRAGFTAFDLAMSRATLALPAWLKLGQSMVRP 165
>gi|224372585|ref|YP_002606957.1| 16S rRNA methyltransferase GidB [Nautilia profundicola AmH]
gi|223589948|gb|ACM93684.1| methyltransferase GidB [Nautilia profundicola AmH]
Length = 175
Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+ K + F LKW+K + T E+ + +EDSL + + +D+G+G GFP
Sbjct: 1 MNKFDIFTNELLKWNKVHKFTNYKTPEEIREQ-IEDSLYPLEKIKHYKTALDIGTGAGFP 59
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDV 144
G++ +I + + L+E K+ SFL Y+ K + R+++A I ++
Sbjct: 60 GLVLAIAMPETKW---YLVEPLKKRYSFLNYMKIKLNLDNVKIVPSRLEKAD--IDPVEL 114
Query: 145 ISARALADLDTLLEYSFPWLYQ 166
I+ RA+ ++E S P+L +
Sbjct: 115 ITTRAVMPTSKIIEISRPYLEK 136
>gi|242092572|ref|XP_002436776.1| hypothetical protein SORBIDRAFT_10g008640 [Sorghum bicolor]
gi|241914999|gb|EER88143.1| hypothetical protein SORBIDRAFT_10g008640 [Sorghum bicolor]
Length = 190
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 17/124 (13%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-------------- 70
++ + L+W++++NL + + + RHV DSL +
Sbjct: 57 QQRQVTIYVDTLLEWNQRMNLTAVTDEAEVMTRHVADSLAMLPPLERAYRGRSTSAGGSI 116
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
ID+GSG G PG+I ++ S + L+ES K+ +FL + V+ C
Sbjct: 117 DGVSLIDVGSGAGLPGLILAVARPSWK---FTLLESMRKRCTFLEHAVEAMELSNVNVVC 173
Query: 131 RIQE 134
Sbjct: 174 DRDR 177
>gi|94986875|ref|YP_594808.1| S-adenosylmethionine-dependent methyltransferase involved in cell
division [Lawsonia intracellularis PHE/MN1-00]
gi|193806444|sp|Q1MR90|RSMG_LAWIP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|94731124|emb|CAJ54486.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Lawsonia intracellularis
PHE/MN1-00]
Length = 216
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+R L +++S + +E L + L KW+K +NLV +T + + DS +
Sbjct: 12 IRQYCLQLGFSLSDQEIESLRGYLCLLTKWNKVMNLVGFTTWKTICSNLIIDSFHLAIFI 71
Query: 70 -----PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
P + D GSG G PGI I + G L+ES+ K+A FL+ ++ +
Sbjct: 72 RSLSLPTDPLCWDFGSGAGLPGIPLRII---WKEGSYWLVESREKRAIFLKTLLAQYPLT 128
Query: 125 GK-VFACRIQEAPQMITTCDV--ISARALADLDTLLEY 159
V+ R++E DV I +RA LL+
Sbjct: 129 QTYVYCGRVEEFMLANCLSDVALIVSRAFMPWQALLKL 166
>gi|157964123|ref|YP_001498947.1| 16S rRNA methyltransferase GidB [Rickettsia massiliae MTU5]
gi|189040815|sp|A8F0G4|RSMG_RICM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157843899|gb|ABV84400.1| Putative S-adenosylmethionine-dependent methyltransferase GidB
[Rickettsia massiliae MTU5]
Length = 193
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
V RE +EKLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 4 EVPREIIEKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDI 63
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG G PGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 64 GSGSGLPGIVLSIAG----VAQVSLIEADLRKCIFLEKASKISNNNIQIINQRIEKIE-- 117
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 118 -IDCSILTCRAFSNLNTI 134
>gi|269216518|ref|ZP_06160372.1| 16S rRNA methyltransferase GidB [Slackia exigua ATCC 700122]
gi|269130047|gb|EEZ61129.1| 16S rRNA methyltransferase GidB [Slackia exigua ATCC 700122]
Length = 249
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 5 DSNSILRANYLLNTYNV--SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS 62
+ + L A+ + +TY + + E + +E + +K ++K+NL ++ I H+EDS
Sbjct: 13 ERHMGLLADTMRSTYGIVIAPEKEKMVEDYLASVIKMNEKLNLTRIVHEQEARILHLEDS 72
Query: 63 LRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L L P + DLG+GGGFPGI +I L++S +KK + ++ +V
Sbjct: 73 LTALPLVEDALPGRYADLGTGGGFPGIPLAIA----SERPTLLVDSVSKKIAAVKAMVSD 128
Query: 121 TAARGKV--FACRIQE-APQMITTCDVISARALADLDTLLEYSFPWL 164
A + +A RI++ A + VI+ARA+ L +L+E + P L
Sbjct: 129 LAWDSDIAYYAGRIEDLAREERNGFAVITARAVTKLVSLIELASPLL 175
>gi|309808177|ref|ZP_07702087.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
01V1-a]
gi|308168558|gb|EFO70666.1| 16S rRNA methyltransferase GidB [Lactobacillus iners LactinV
01V1-a]
Length = 194
Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
++ D+G+G GFP + I I+ + +I+S K+ +FL +V++
Sbjct: 9 EMISNAESLCDVGAGAGFPSVPIKIIYPDIK---LTIIDSLGKRLTFLDKLVKQLGLDNI 65
Query: 126 KVFACRIQEAP---QMITTCDVISARALADLDTLLEYSFPWLY 165
+ R ++A ++ DV++ARA+A + L EY P +
Sbjct: 66 TLVHSRAEDAGRNIKLRENFDVVTARAVARMSVLSEYCLPLVK 108
>gi|330837280|ref|YP_004411921.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta
coccoides DSM 17374]
gi|329749183|gb|AEC02539.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta
coccoides DSM 17374]
Length = 227
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 13/159 (8%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
+ R+ + +LE + W+ LV++ D IRH+ DSL
Sbjct: 6 DLCRSGIAELGLGFTENQHGQLEKYLSELTLWNPVYRLVNA-EGRDIVIRHLLDSLAAVP 64
Query: 68 LH-------PYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ P S D+GSG G PGI +I + + LIE ++A FL +
Sbjct: 65 ILRSLLDESPAGSREVCDVGSGPGLPGIPLAIAMPDVR---FTLIERMGRRADFLANALA 121
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLE 158
+ G+V + + ++ V++ RA L ++E
Sbjct: 122 ACSLDGRVNVVQR-DINEIRGKFPVVTFRAFHPLPDIIE 159
>gi|78213571|ref|YP_382350.1| methyltransferase GidB [Synechococcus sp. CC9605]
gi|123577673|sp|Q3AHY7|RSMG_SYNSC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78198030|gb|ABB35795.1| methyltransferase GidB [Synechococcus sp. CC9605]
Length = 243
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPS 73
+ S+ ++LE L W++++NL +DFWI V DSL Q P
Sbjct: 15 GWQPSQAQRDQLEELQGLLQSWNERVNLTRLVNGDDFWIGQVFDSLWPLAGELQSANEPQ 74
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACR 131
WID+G+GGGFPG+ +I L + V L++S +K + + + R V R
Sbjct: 75 HWIDVGTGGGFPGLAIAIALPQAQ---VTLLDSVGRKTAAVEAMASSLGLADRVGVRTER 131
Query: 132 IQ---EAPQMITTCD 143
I+ + D
Sbjct: 132 IETTGRDRHFRGSFD 146
>gi|317126735|ref|YP_004100847.1| 16S rRNA m(7)G-527 methyltransferase [Intrasporangium calvum DSM
43043]
gi|315590823|gb|ADU50120.1| 16S rRNA m(7)G-527 methyltransferase [Intrasporangium calvum DSM
43043]
Length = 300
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 6/141 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWIDLGSGGGFPG 86
E F + L+ W RHV + V + P ID+GSG G PG
Sbjct: 67 EEFVTILADTGISHGLIGPREAPRLWDRHVLNCGLVHHVIPVGTPGQRVIDIGSGAGLPG 126
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ +I +E V+L+E ++ +L V + V E+ + ++
Sbjct: 127 LVLAIARPDLE---VHLVEPLARRTGWLSGVTARLELENVVIHTARAESMWDRISAPWVT 183
Query: 147 ARALADLDTLLEYSFPWLYQK 167
ARA++ + L ++ P L +
Sbjct: 184 ARAVSGILQLAHWTLPLLEPR 204
>gi|294505875|ref|YP_003569933.1| Methyltransferase gidB [Salinibacter ruber M8]
gi|294342203|emb|CBH22981.1| Methyltransferase gidB [Salinibacter ruber M8]
Length = 215
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDL 78
+++ E E+L+ F L++++++NL+S T F RH+ L + + P +D
Sbjct: 11 SLTAEQREQLDRFREQLLRFNQRVNLISPETEGAFRTRHLLHCLTLTARDFPAGCTVVDW 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQ 137
G+GGG P I +I V ++S KK+ +R + ++ + R E
Sbjct: 71 GTGGGLPAIPLAICHPE---ATVVGVDSVGKKSRAVRTIARRLGLDNCFTWNGRADE--- 124
Query: 138 MITTCDVISARALADLDTLLEY 159
+RA A L L +
Sbjct: 125 WTGEAHYSVSRATAPLADLWAW 146
>gi|83815319|ref|YP_444214.1| glucose inhibited division protein B [Salinibacter ruber DSM 13855]
gi|123529871|sp|Q2S6G7|RSMG_SALRD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|83756713|gb|ABC44826.1| glucose inhibited division protein B [Salinibacter ruber DSM 13855]
Length = 215
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDL 78
+++ E E+++ F L++++++NL+S T + F RH+ L + + P +D
Sbjct: 11 SLTAEQREQIDRFREQLLRFNQRVNLISPETEDTFRTRHLLHCLTLTARDFPAGCTVVDW 70
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQ 137
G+GGG P I +I V ++S KK+ +R + ++ + R E
Sbjct: 71 GTGGGLPAIPLAICHPE---ATVVGVDSVGKKSRAVRTIARRLGLDNCFTWNGRADE--- 124
Query: 138 MITTCDVISARALADLDTLLEY 159
+RA A L L +
Sbjct: 125 WTGEAHYSVSRATAPLADLWAW 146
>gi|117929363|ref|YP_873914.1| methyltransferase GidB [Acidothermus cellulolyticus 11B]
gi|166224340|sp|A0LWW8|RSMG_ACIC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|117649826|gb|ABK53928.1| 16S rRNA m(7)G-527 methyltransferase [Acidothermus cellulolyticus
11B]
Length = 222
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ + L+ + V+ W RH+ + + L P ID+GSG G PGI+ +
Sbjct: 25 RYVEWLSTAGLERGLIGPAEVDRLWERHIANCAALAPLIPVDQRVIDVGSGAGLPGIVLA 84
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRIQEAPQMITTCDVISARA 149
+ +E V LIE+ +++ +FLR VV R V R + T V++ARA
Sbjct: 85 LARPDLE---VLLIEAMSRRTAFLREVVADLGLRDVTVENSRAENVA---CTAPVVTARA 138
Query: 150 LADLDTLLEYSFPWLYQ 166
+A L L++ L
Sbjct: 139 VAPLPRLVKNVAHLLEP 155
>gi|158319051|ref|YP_001511559.1| 16S rRNA methyltransferase GidB [Frankia sp. EAN1pec]
gi|158114456|gb|ABW16653.1| methyltransferase GidB [Frankia sp. EAN1pec]
Length = 306
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 19/151 (12%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI----------WIDLGS 80
+ + + L+ W RH+ +S + + P S +D+GS
Sbjct: 62 RYVEMLSTAGVERGLIGPRETGRLWERHLLNSAVLAEAVPTRSASPGSDEAALEVVDVGS 121
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-----IQEA 135
G G PGI ++ + V L+E ++ FL V + G+V R + E
Sbjct: 122 GAGLPGIPLALARPDLR---VTLLEPMERRCRFLAEAVAELGLAGQVEVVRGRAPDVAEL 178
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
P T DV ARA+A L L P
Sbjct: 179 PPHR-TFDVTVARAVAPLGRLGAVLLPMTRP 208
>gi|262277799|ref|ZP_06055592.1| 16S rRNA methyltransferase GidB [alpha proteobacterium HIMB114]
gi|262224902|gb|EEY75361.1| 16S rRNA methyltransferase GidB [alpha proteobacterium HIMB114]
Length = 205
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
++R+NY +VSRETL K+ ++ L+ ++K++L+S ST ++ RH D ++ +
Sbjct: 1 MIRSNYFDK--SVSRETLGKISKYHEFLLENNQKLSLISKSTEKEAIERHYADCAQIIKY 58
Query: 69 HPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYVVQKTAARGK 126
+D+GSG G PGII I +L+E KK++FL+ K
Sbjct: 59 FDKTDKSVLDIGSGAGLPGIILDIIKKDHNLNFSTHLVEKSPKKSNFLKKANSFLDLDIK 118
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTL 156
+ C +++ I + +RA +
Sbjct: 119 IHNCDVKQME--IKNFTTLVSRAFKPMKEF 146
>gi|240047159|ref|YP_002960547.1| 16S rRNA methyltransferase GidB [Mycoplasma conjunctivae HRC/581]
gi|239984731|emb|CAT04705.1| Ribosomal RNA small subunit methyltransferase [Mycoplasma
conjunctivae]
Length = 204
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------PYPSI 74
V + +LE + L + +K +NL + E W + +S+
Sbjct: 13 VGETSFSQLERYVNLIEEKNKVMNLTGF-SGEKLWKEGILESILTLNFVQKWTKKKENFS 71
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSG GFP I I +I+ + ++ES K+ FL+ V + + + R++
Sbjct: 72 LVDIGSGVGFPSIPYLIFNPNID---LTIVESLQKRCDFLKLVANELGLKFNLVCDRMEN 128
Query: 135 APQMITTCDVISARALADLDTLLEYS 160
Q D+++ARA++ LD L++ +
Sbjct: 129 VDQ---KFDILTARAVSSLDKLIKLT 151
>gi|240168403|ref|ZP_04747062.1| glucose-inhibited division protein B [Mycobacterium kansasii ATCC
12478]
Length = 217
Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E W RH+ + + +L +D+GSG G PG+ ++ + + L+
Sbjct: 27 LLGPREAERVWERHLLNCAVIGELVGAGERVVDIGSGAGLPGVPLALARPDLR---IILL 83
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFP 162
E +++ FL VV V R ++ + + DV +RA+A LD L ++S
Sbjct: 84 EPLLRRSEFLCAVVADLELAVDVVRGRAEDPAVRKRLGASDVAVSRAVAPLDKLTKWSMA 143
Query: 163 WLYQ 166
L +
Sbjct: 144 LLKR 147
>gi|328956376|ref|YP_004373709.1| methyltransferase GidB [Coriobacterium glomerans PW2]
gi|328456700|gb|AEB07894.1| methyltransferase GidB [Coriobacterium glomerans PW2]
Length = 251
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 8/150 (5%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWI 76
+ + E L LK ++ NL + I HV DSL + + + +
Sbjct: 31 LELFTDQAELCVRHLLLVLKLNRTQNLTRITDPNKGLILHVLDSLLLSRYIHSDEQASLL 90
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQE- 134
D+G+G GFPGI I + L++S KK + ++ R+++
Sbjct: 91 DMGTGPGFPGIPLHI----LTRYPTVLVDSVRKKIEAVTDIISALDLSSVSAIHTRLEDF 146
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWL 164
A + ARALA L TLLE + P +
Sbjct: 147 ALSDYDGFPFVVARALAPLPTLLELAAPLV 176
>gi|295394852|ref|ZP_06805065.1| 16S rRNA methyltransferase GidB [Brevibacterium mcbrellneri ATCC
49030]
gi|294972185|gb|EFG48047.1| 16S rRNA methyltransferase GidB [Brevibacterium mcbrellneri ATCC
49030]
Length = 209
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E L + + L+ ++ W RH+ + V L + D+GSG G
Sbjct: 17 ERLPHARTYAEHLATTGVEWGLIGPRELDKLWTRHILNCAVVAPLIHDDDVVGDIGSGAG 76
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
PG++ S+ LIE+ ++ +L VV ++ R+++
Sbjct: 77 LPGLVLSLAQPH---ASFVLIEAMERRVDWLGMVVDDLGIENVRIIRGRVEDLVD-DEVF 132
Query: 143 DVISARALADLDTLLEYSFPWLYQ 166
V++ARA+ L+ L+E+S P L
Sbjct: 133 TVVTARAVKALNVLVEWSAPVLSP 156
>gi|158520421|ref|YP_001528291.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
gi|158509247|gb|ABW66214.1| methyltransferase GidB [Desulfococcus oleovorans Hxd3]
Length = 490
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S L++L ++ L K + ++NL E+ ++ DS+ L PS +DLG+
Sbjct: 32 LSDAGLKQLWSYHCLLRKHNPELNLTRIHNFENMVLKLYVDSILPGTLVDLPSPLLDLGT 91
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G PGI I + V L E + K+ +FL VQ+ G R AP
Sbjct: 92 GPGMPGIPLKIAFPEL---TVLLAEGRGKRVAFLNTAVQELGLYGVSVIGRAI-APDFQE 147
Query: 141 TCDVISARALADLDTLLE 158
+ RA+ + LE
Sbjct: 148 PVAGVITRAVEAMAATLE 165
>gi|116071160|ref|ZP_01468429.1| Glucose inhibited division protein [Synechococcus sp. BL107]
gi|116066565|gb|EAU72322.1| Glucose inhibited division protein [Synechococcus sp. BL107]
Length = 243
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--- 70
+ + S E +++L L +W+ K+NL +D+WI V DSL
Sbjct: 11 WTALGWQPSTEQVDQLAMLQVLLREWNAKVNLTRLVEGDDYWINQVFDSLWPLAAELNKP 70
Query: 71 -YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKV 127
P +D+G+GGGFPG+ +I L G + L++S +K + + + K R V
Sbjct: 71 HQPRTCMDVGTGGGFPGLAIAIALP---GAHMTLLDSVGRKTAAVEAMASKLGLADRVAV 127
Query: 128 FACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
RI+ D+ ARA+A + EY P L K
Sbjct: 128 RTERIETTGHDRACRGQFDLAMARAVAAAPVVAEYLVPLLKPK 170
>gi|114778890|ref|ZP_01453687.1| hypothetical protein SPV1_12110 [Mariprofundus ferrooxydans PV-1]
gi|114550859|gb|EAU53425.1| hypothetical protein SPV1_12110 [Mariprofundus ferrooxydans PV-1]
Length = 186
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
++ + + +++ K +NL S ST ++F R + SL + P +D+GSG G P
Sbjct: 3 VDLCDAYVSEVMRFRKALNLTSISTHDEFVERFILPSLALLDWVPDSGRLLDIGSGMGVP 62
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
GI + S + G L+E + K+A FLR++V+ +VF I P + + DV
Sbjct: 63 GIPLLLARSGLHG---LLVERRKKRAEFLRHIVRTLDLNAEVFDADINHLPSL--SADVC 117
Query: 146 SARALADLDTLLEYS 160
ARA+ D LL
Sbjct: 118 VARAVTDERELLTMC 132
>gi|323357962|ref|YP_004224358.1| S-adenosylmethionine-dependent methyltransferase [Microbacterium
testaceum StLB037]
gi|323274333|dbj|BAJ74478.1| predicted S-adenosylmethionine-dependent methyltransferase
[Microbacterium testaceum StLB037]
Length = 209
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ L+ F ++ L+ V W RH+ +S L + D+GSG G
Sbjct: 18 DRLDLARRFTQALADHGEERGLIGPLEVPRLWTRHILNSAVAAPL--FEGQAADIGSGAG 75
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PGI+ +I ++ LIE ++ +L + A E + D
Sbjct: 76 LPGIVLAIARPDVQWT---LIEPMERRTVWLTEQAESLGLTNVTVARMRGEEWTGGRSFD 132
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
V++ARA++ L TLL + P +
Sbjct: 133 VVTARAVSALRTLLPSTAPLVRP 155
>gi|332186973|ref|ZP_08388714.1| 16S rRNA methyltransferase GidB [Sphingomonas sp. S17]
gi|332012983|gb|EGI55047.1| 16S rRNA methyltransferase GidB [Sphingomonas sp. S17]
Length = 204
Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDLGSG 81
+ K+++F L + + + NL++ ST+ W RH DSL++ L WID+G+G
Sbjct: 16 EDAAAKIDWFLNLVIVENDQQNLIAPSTIATIWARHALDSLQLIPLADRADGQWIDIGTG 75
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMI 139
GGFPG++ ++ G V L+E + ++A FLR + R V A +I+ +
Sbjct: 76 GGFPGMVVALAWP----GQVALVEPRKRRAEFLRDCAETLGVADRVTVHASKIE---SVQ 128
Query: 140 TTCDVISARALADLDTLLE 158
D+ISARA+A ++ LL
Sbjct: 129 AKADIISARAVATVENLLR 147
>gi|238810254|dbj|BAH70044.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 231
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-------PYPSIWIDLGSG 81
L+ + + ++ +N+ T++D + + + DS+ F+ + +D+G+G
Sbjct: 23 LKEYAQMIYDQNQVMNITGFKTLDDIFEQGILDSILAFENYMMHYDENLENKKILDVGAG 82
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFP I I L + + +IES+ K+ +FL V + + R++E ++
Sbjct: 83 AGFPSIPILIALDN--KFNLTIIESQKKRCNFLEKVKARFNLSVNIINSRVEEFFKLTNY 140
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
++I+ARA+A + L + L +
Sbjct: 141 FEIITARAVASIKVLYLSAAHLLKNR 166
>gi|126641595|ref|YP_001084579.1| 16S rRNA methyltransferase GidB [Acinetobacter baumannii ATCC
17978]
Length = 159
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
++H+ DSL + + P +D+G+GGG PG+I ++ L++S KK F
Sbjct: 1 MLVKHLLDSLSILKDLP-AGRLLDVGTGGGMPGMIIALCQPERSC---VLLDSNGKKIRF 56
Query: 114 LRYVVQKTAARGKV-FACRIQ--EAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
L+ + + + R++ + + DVI++RA A L +E + P+L+++
Sbjct: 57 LKQFIADLKLKNVIAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHEQ 113
>gi|317484736|ref|ZP_07943636.1| 16S rRNA methyltransferase GidB [Bilophila wadsworthia 3_1_6]
gi|316923988|gb|EFV45174.1| 16S rRNA methyltransferase GidB [Bilophila wadsworthia 3_1_6]
Length = 224
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+ ++ ETL L + L ++W++ +NLV + T ED + V DSL + + +
Sbjct: 19 GFELTEETLPPLAGYLGLLIQWNRVMNLVGTRTAEDTFFTLVVDSLHLGRFLREDVEYSA 78
Query: 77 -----DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
DLGSG G PG+ + + G ++E++ K+A FL V+ K G VF
Sbjct: 79 APCCWDLGSGAGLPGLPLRMI---WQEGDYWMVEAREKRALFLSTVLAKYPLPGTHVFRG 135
Query: 131 RIQE--APQMITTCDVISARALADLDTLLEY 159
R + A T D+I +RA +LE
Sbjct: 136 RAEAFMAGPPARTADLIVSRAFMPWPGVLEL 166
>gi|7657948|emb|CAB89206.1| putative glucose inhibited division protein B [Thermus
thermophilus]
Length = 225
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 31/156 (19%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIWIDLGSGGG 83
LE Y L + S K+NL + E+ ++H DSL + +L P +DLG+G G
Sbjct: 9 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAG 68
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTC 142
FPG+ I +E + L+++ KK +F+ ++ +G + R +
Sbjct: 69 FPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLGLKGARALWGRAE--------- 116
Query: 143 DVISAR-A-------------LADLDTLLEYSFPWL 164
+ AR A +A L L E P+L
Sbjct: 117 --VLAREAGHREAYARAVARAVAPLCVLSELLLPFL 150
>gi|268318295|ref|YP_003292014.1| glucose inhibited division protein [Rhodothermus marinus DSM 4252]
gi|262335829|gb|ACY49626.1| glucose inhibited division protein [Rhodothermus marinus DSM 4252]
Length = 239
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-FQLHPYPSIWIDL 78
+ E+LE++ L + + NLVS T+ + RH+ L + ++ P S+ +D
Sbjct: 28 QLDPAQREQLEHYARLLQELGRHHNLVSRETLPELHRRHLLHCLALTWRPFPPGSVVVDW 87
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
G+GGG P + +I + V+ +++ KK +R + ++ +V R +
Sbjct: 88 GTGGGLPAVPLAIAFPEV---TVHAVDAAQKKVLAVRTMARRLGLANLQVHHARAERWE- 143
Query: 138 MITTCDVISARALADLDTLLEY----SFPW 163
+RA A L TL ++ + P
Sbjct: 144 --GAAHYSVSRATAPLATLWQWHRRVARPL 171
>gi|260436464|ref|ZP_05790434.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8109]
gi|260414338|gb|EEX07634.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8109]
Length = 243
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQLHPYPS 73
+ SR ++L L W++++NL +DFWI V DSL Q P
Sbjct: 15 GWQPSRAQRDQLVELQGLLHSWNERVNLTRLVNGDDFWIGQVFDSLWPLAGELQSADEPQ 74
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACR 131
WID+G+GGGFPG+ +I L + V L++S +K + + + R +V R
Sbjct: 75 NWIDVGTGGGFPGLAIAIALPQAQ---VTLLDSVGRKTAAVEAMASSLGLADRVRVRTER 131
Query: 132 IQ---EAPQMITTCD 143
I+ + D
Sbjct: 132 IETTGRDRHFRGSFD 146
>gi|307637080|gb|ADN79530.1| rRNA small subunit methyltransferase,glucose inhibited division
protein [Helicobacter pylori 908]
gi|325995671|gb|ADZ51076.1| rRNA small subunit methyltransferase/glucose inhibited division
protein B [Helicobacter pylori 2018]
gi|325997267|gb|ADZ49475.1| 16S rRNA methyltransferase [Helicobacter pylori 2017]
Length = 178
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYACILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+I+ + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 64 LAIEKPEAQ---FILLEPRIKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSRCFLKDK 139
>gi|308190288|ref|YP_003923219.1| methyltransferase [Mycoplasma fermentans JER]
gi|319777682|ref|YP_004137333.1| methyltransferase gidb (glucose inhibiteddivision protein b)
[Mycoplasma fermentans M64]
gi|307625030|gb|ADN69335.1| methyltransferase [Mycoplasma fermentans JER]
gi|318038757|gb|ADV34956.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma fermentans M64]
Length = 230
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-------PYPSIWIDLGSG 81
L+ + + ++ +N+ T++D + + + DS+ F+ + +D+G+G
Sbjct: 22 LKEYAQMIYDQNQVMNITGFKTLDDIFEQGILDSILAFENYMMHYDENLENKKILDVGAG 81
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFP I I L + + +IES+ K+ +FL V + + R++E ++
Sbjct: 82 AGFPSIPILIALDN--KFNLTIIESQKKRCNFLEKVKARFNLSVNIINSRVEEFFKLTNY 139
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
++I+ARA+A + L + L +
Sbjct: 140 FEIITARAVASIKVLYLSAAHLLKNR 165
>gi|309800606|ref|ZP_07694750.1| methyltransferase GidB [Streptococcus infantis SK1302]
gi|308115752|gb|EFO53284.1| methyltransferase GidB [Streptococcus infantis SK1302]
Length = 172
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P +D+G+G GFP + I ++ V +I+S NK+ +FL + Q+
Sbjct: 2 IENQPIKLLDIGAGAGFPSLPMKILYPQLD---VTIIDSLNKRINFLNLLAQELGLENVH 58
Query: 128 F-ACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWLY 165
F R ++ Q D+++ARA+A L L E + P+L
Sbjct: 59 FYHGRAEDFGQDKNFRAQFDIVTARAVARLQVLSELTIPFLK 100
>gi|327398257|ref|YP_004339126.1| Ribosomal RNA small subunit methyltransferase G [Hippea maritima
DSM 10411]
gi|327180886|gb|AEA33067.1| Ribosomal RNA small subunit methyltransferase G [Hippea maritima
DSM 10411]
Length = 195
Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 7/149 (4%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH- 69
R + ++ + EKL + +W+K I L+S E+ V SL F+
Sbjct: 7 RLEKVFKKVDIPQNGTEKLITYIETLQEWNKNIALISKRE-ENIVNHLVAPSLLFFKFFR 65
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSG GFP ++ I S++ V +IE NKKA+FL Y+ K + +
Sbjct: 66 DNNLSVVDIGSGAGFPAVVIKIYKPSLD---VIMIEPNNKKAAFLNYICAKLKLKCNIIN 122
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLE 158
RI++ I CDVI+ARAL ++ L+E
Sbjct: 123 KRIEQINNPIE-CDVITARAL-NIKPLIE 149
>gi|239946970|ref|ZP_04698723.1| 16S rRNA methyltransferase GidB [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921246|gb|EER21270.1| 16S rRNA methyltransferase GidB [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 190
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
+ RE +EKLE F L KW+K INLVS +++ +FW RH+ DSL++ Q I +D+
Sbjct: 2 EIPREIIEKLEIFQKLVKKWNKSINLVS-NSIHNFWQRHILDSLQLIQYIDNKEIHLVDI 60
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFPGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 61 GSGSGFPGIVLSIAG----VAKVSLIEADLRKCIFLEKASKISNNNIQIINQRIEKVE-- 114
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 115 -IDCSILTCRAFSNLNTI 131
>gi|15611430|ref|NP_223081.1| 16S rRNA methyltransferase GidB [Helicobacter pylori J99]
gi|7387704|sp|Q9ZM61|RSMG_HELPJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|4154892|gb|AAD05942.1| GLUCOSE INHIBITED DIVISION PROTEIN B [Helicobacter pylori J99]
Length = 178
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 64 LALEKPEAQ---FILLEPRVKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|308184186|ref|YP_003928319.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SJM180]
gi|308060106|gb|ADO02002.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SJM180]
Length = 178
Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEAQ---FILLEPRVKRAAFLNYIKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|317013827|gb|ADU81263.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Gambia94/24]
Length = 178
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + E Q + D+I++R
Sbjct: 64 LALEKPEAQ---FILLEPRIKRAAFLNYLKSVLPLNNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSRCFLKDK 139
>gi|261839232|gb|ACX98997.1| glucose-inhibited division protein B [Helicobacter pylori 52]
Length = 178
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPKVQ---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|15645677|ref|NP_207854.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 26695]
gi|3122146|sp|O25703|RSMG_HELPY RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2314206|gb|AAD08103.1| glucose-inhibited division protein (gidB) [Helicobacter pylori
26695]
Length = 178
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|317009030|gb|ADU79610.1| 16S rRNA methyltransferase GidB [Helicobacter pylori India7]
Length = 178
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|218960615|ref|YP_001740390.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division (gidB-like) [Candidatus
Cloacamonas acidaminovorans]
gi|167729272|emb|CAO80183.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division (gidB-like) [Candidatus
Cloacamonas acidaminovorans]
Length = 219
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTV-EDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGG 83
+ + E++ L ++K+NLVS + E +W++H DS+ + + +D GSGGG
Sbjct: 30 MARFEHYLHLLYNANRKVNLVSRNIPLERYWVQHFLDSIVALECLDFTDKTVLDFGSGGG 89
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP--QMIT 140
PGI + + + L++S KKA LR V + V A R+++
Sbjct: 90 LPGIPLKLAVPDFN---LTLLDSVQKKARVLREFVDALSLSATNVEASRLEDYAYVAKRP 146
Query: 141 TCDVISARALA 151
+ D I RA+A
Sbjct: 147 SYDFIVCRAVA 157
>gi|193806485|sp|A2BYK1|RSMG_PROM5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
Length = 239
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWI 76
++ E + + + + K NL +D+WI V DSL F+ +I
Sbjct: 14 ITGEEIMMFQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFI 73
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQE 134
D+GSG GFPG +I + E + L++S KK L+ ++++ + V RI+
Sbjct: 74 DIGSGCGFPGFAYAITHPNSE---IYLVDSSKKKTDSLKEIIKRMNFKNNIFVINDRIEN 130
Query: 135 APQ---MITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + ++ +ARA+++ T+ EY P L Q
Sbjct: 131 VGRQSSFKKSFNIATARAVSNPSTVAEYILPMLEQ 165
>gi|254779074|ref|YP_003057179.1| 16S rRNA methyltransferase GidB [Helicobacter pylori B38]
gi|254000985|emb|CAX28929.1| Glucose-inhibited division protein [Helicobacter pylori B38]
Length = 178
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPETQ---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|55981940|ref|YP_145237.1| 16S rRNA methyltransferase GidB [Thermus thermophilus HB8]
gi|62298017|sp|Q9LCY2|RSMG_THET8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|55773353|dbj|BAD71794.1| glucose inhibited division protein B [Thermus thermophilus HB8]
Length = 249
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++L ++ LE Y L + S K+NL + E+ ++H DSL
Sbjct: 13 RGRALLLEGGKALGLDLKPH-LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLT 71
Query: 65 VFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +L P +DLG+G GFPG+ I +E + L+++ KK +F+ ++
Sbjct: 72 LLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLG 128
Query: 123 ARG-KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+G + R + ARA+A L L E P+L
Sbjct: 129 LKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSELLLPFL 174
>gi|297379605|gb|ADI34492.1| methyltransferase GidB [Helicobacter pylori v225d]
Length = 178
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLSLRNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|242556525|pdb|3G88|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group P61
gi|242556526|pdb|3G88|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group P61
gi|242556528|pdb|3G89|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet And Amp In Space Group P61
gi|242556529|pdb|3G89|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet And Amp In Space Group P61
gi|242556532|pdb|3G8A|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556533|pdb|3G8A|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556534|pdb|3G8A|C Chain C, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556535|pdb|3G8A|D Chain D, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556536|pdb|3G8A|E Chain E, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556537|pdb|3G8A|F Chain F, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adohcy In Space Group P61
gi|242556539|pdb|3G8B|A Chain A, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group I222
gi|242556540|pdb|3G8B|B Chain B, T. Thermophilus 16s Rrna G527 Methyltransferase In Complex
With Adomet In Space Group I222
Length = 249
Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
++L ++ LE Y L + S K+NL + E+ ++H DSL
Sbjct: 13 RGRALLLEGGKALGLDLKPH-LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLT 71
Query: 65 VFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +L P +DLG+G GFPG+ I +E + L+++ KK +F+ ++
Sbjct: 72 LLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELE---LVLVDATRKKVAFVERAIEVLG 128
Query: 123 ARG-KVFACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+G + R + ARA+A L L E P+L
Sbjct: 129 LKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSELLLPFL 174
>gi|294790218|ref|ZP_06755376.1| 16S rRNA methyltransferase GidB [Scardovia inopinata F0304]
gi|294458115|gb|EFG26468.1| 16S rRNA methyltransferase GidB [Scardovia inopinata F0304]
Length = 254
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 48/184 (26%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---------PSIWIDL 78
K+E F+ L+ + W RH+ +S + D+
Sbjct: 21 KMELFHKKLEDEGLIRGLIGPRDGDIIWERHILNSAALVPFIKEMLPDPETDRQVTIGDV 80
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA-- 135
G+GGGFPGI+ + +LIE ++ +L +V V R +E
Sbjct: 81 GTGGGFPGIVLAACFP---AVSFDLIEPMERRCEWLAEMVDMLQLTNATVVRARTEELIS 137
Query: 136 ---------------------------------PQMITTCDVISARALADLDTLLEYSFP 162
+ D+++ RA+A + L + P
Sbjct: 138 KKKEFSRTSGGHVDSSRANAGRRGRKPGSRQAQSEHFNGYDIVTCRAVAPMTKLAGMTLP 197
Query: 163 WLYQ 166
L +
Sbjct: 198 LLKK 201
>gi|327334545|gb|EGE76256.1| 16S rRNA methyltransferase GidB [Propionibacterium acnes HL097PA1]
Length = 211
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ R+ + + + + + L+ + W RH+ +S+ + L P D+GS
Sbjct: 16 LYRDNYKTIRQYVDILVSRGVDWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGS 75
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQM 138
G G PGI +I +E + LIE ++++FL + + R V R ++
Sbjct: 76 GAGLPGIPLAILRPDLE---MTLIEPMLRRSNFLTEALDELGLDDRVTVVRGRAEDVDLH 132
Query: 139 ITTCDVISARALADLDTLLEYSF 161
+ +RA+A L TL+ ++
Sbjct: 133 VDVV---VSRAVAKLATLINWTA 152
>gi|108562809|ref|YP_627125.1| 16S rRNA methyltransferase GidB [Helicobacter pylori HPAG1]
gi|123247021|sp|Q1CUC1|RSMG_HELPH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|107836582|gb|ABF84451.1| glucose-inhibited division protein [Helicobacter pylori HPAG1]
Length = 178
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKCLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLENYQSPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|208434331|ref|YP_002265997.1| glucose-inhibited division protein B [Helicobacter pylori G27]
gi|208432260|gb|ACI27131.1| glucose-inhibited division protein B [Helicobacter pylori G27]
Length = 178
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|148243045|ref|YP_001228202.1| 16S rRNA methyltransferase GidB [Synechococcus sp. RCC307]
gi|166989556|sp|A5GVE0|RSMG_SYNR3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147851355|emb|CAK28849.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Synechococcus sp. RCC307]
Length = 237
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL---HPYPSI 74
T+ S + L++ L +W+ K+NL ED+WI + DSL Q P
Sbjct: 11 TWQPSSDQLQQFNRLQELLREWNGKVNLTRLVEGEDYWISQIFDSLWPLQPWLSKGEPLK 70
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRI 132
ID+G+GGGFPG+ +I L + + L++S +K ++ + +V R
Sbjct: 71 VIDVGTGGGFPGLAIAIALPQAQ---LTLVDSVGRKVQAVQAMADALGLTERVQLRCERA 127
Query: 133 Q---EAPQMITTC 142
+ P
Sbjct: 128 EKTGRDPHCRRQF 140
>gi|307297008|ref|ZP_07576824.1| methyltransferase GidB [Sphingobium chlorophenolicum L-1]
gi|306877534|gb|EFN08762.1| methyltransferase GidB [Sphingobium chlorophenolicum L-1]
Length = 211
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+L ++V RET +LE + + L + NL++ ST W RH+ DS ++ L
Sbjct: 8 QWLEQQFDVPRETWNRLERYVAILLAEMDRQNLIAESTRPHVWARHIVDSAQLIPLAANG 67
Query: 73 --SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
WIDLGSG G PGI+ +I + V ++ES+ K+ FL V+ + G VF
Sbjct: 68 GEGQWIDLGSGAGLPGIVVAI----LTDRPVQMVESRRKRIDFLNAVIAELHLSGASVFG 123
Query: 130 CRIQEAPQ------MITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ P A L LLE + +K
Sbjct: 124 GRVEIVPPARAAIISARAY--------APLPKLLESAVHLSDEK 159
>gi|217031610|ref|ZP_03437115.1| hypothetical protein HPB128_21g168 [Helicobacter pylori B128]
gi|216946810|gb|EEC25406.1| hypothetical protein HPB128_21g168 [Helicobacter pylori B128]
Length = 253
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPETK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQCFLKDK 139
>gi|188527194|ref|YP_001909881.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Shi470]
gi|188143434|gb|ACD47851.1| glucose-inhibited division protein B [Helicobacter pylori Shi470]
gi|308063246|gb|ADO05133.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Sat464]
Length = 178
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|308061735|gb|ADO03623.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Cuz20]
Length = 178
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|239617843|ref|YP_002941165.1| methyltransferase GidB [Kosmotoga olearia TBF 19.5.1]
gi|239506674|gb|ACR80161.1| methyltransferase GidB [Kosmotoga olearia TBF 19.5.1]
Length = 224
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 7/148 (4%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDL 78
+ + E L F + K NL + + +I+HVED L + +ID+
Sbjct: 2 IELDEKKEELLTRFLKEIIS--SKHNLTAIKDFKQAYIKHVEDVLLAVRKLNLCGRYIDI 59
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ 137
G+GGG PGI+ ++ E L++S KK + + F R +E +
Sbjct: 60 GTGGGVPGIVCAVLFPEAEW---YLLDSVGKKVQEIERISLLLGLSNVHFIVGRAEEVAK 116
Query: 138 -MITTCDVISARALADLDTLLEYSFPWL 164
D RA+ D LEY P++
Sbjct: 117 GYAEFFDGAFLRAVGRADISLEYGTPFV 144
>gi|315586375|gb|ADU40756.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 35A]
Length = 178
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLRNIEIVKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|297570163|ref|YP_003691507.1| methyltransferase GidB [Desulfurivibrio alkaliphilus AHT2]
gi|296926078|gb|ADH86888.1| methyltransferase GidB [Desulfurivibrio alkaliphilus AHT2]
Length = 269
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 74/207 (35%), Gaps = 53/207 (25%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
IL + +L ++ LKWS++INLV+++ + H DSL ++
Sbjct: 7 DILAEGLQQLGLPPEPAAIARLCRYHEELLKWSRRINLVAAAPPRELLATHFLDSLTLWP 66
Query: 68 L-------------------------------HPYPSIW--------------IDLGSGG 82
L HP PS +D+G+G
Sbjct: 67 LLADLPVNDHRAPPLAAIKPAHKGTDLISVPDHPSPSRLQQPALAGDCSRLSLLDVGTGA 126
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACRIQEA----P 136
GFPG+ V L+E + K+ SFLR+V++ + +V A R++
Sbjct: 127 GFPGLALKCWRPE--ALAVTLMEPRAKRVSFLRHVIRTLKLQEGTQVLAQRLEPVTDSQE 184
Query: 137 QMITTCDVISARALADLDTLLEYSFPW 163
+I++RA + L P
Sbjct: 185 APADRFALITSRAFTAIAPFLALCAPL 211
>gi|317968952|ref|ZP_07970342.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CB0205]
Length = 242
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV----FQ 67
A + + S + L++ +W+ ++NL +DFWI + DSL Q
Sbjct: 7 ALWEALHWRPSDDQLQRFLQLQEELRQWNSRVNLTRLVEGDDFWIAQIFDSLWPLVPQLQ 66
Query: 68 LHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--R 124
+P + ID+G+GGGFPG+ +I + + L++S +K + + Q R
Sbjct: 67 ANPEAALRCIDVGTGGGFPGLAVAIAFPQAQ---LTLVDSVGRKTQAVEAMAQSLGLGER 123
Query: 125 GKVFACRIQ---EAPQMITTCDV 144
++ RI+ + D+
Sbjct: 124 VELRCERIELTGRQKRCRGQFDL 146
>gi|308182553|ref|YP_003926680.1| 16S rRNA methyltransferase GidB [Helicobacter pylori PeCan4]
gi|308064738|gb|ADO06630.1| 16S rRNA methyltransferase GidB [Helicobacter pylori PeCan4]
Length = 178
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPETQ---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|307104809|gb|EFN53061.1| hypothetical protein CHLNCDRAFT_58678 [Chlorella variabilis]
Length = 1697
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
ID+GSG G PGII +I E V L++S K+ F V+ +V
Sbjct: 279 GPRLIDVGSGAGLPGIILAIARPDWE---VTLLDSLQKRCRFAEAAVEAAGLANVRVHWG 335
Query: 131 RIQEA---PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R +EA P + DV ARA+A+L L E P +
Sbjct: 336 RAEEAGQDPALRQQHDVAIARAVAELRVLAELCLPLVRP 374
Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
++LR L + E ++++ F + L W++++NL + + + RHV DSL +
Sbjct: 146 ALLRGRVFLKYAGLPPEQQQQVDAFVDILLDWNQRMNLTAIKDRGECYERHVNDSLALLP 205
Query: 68 LHP 70
Sbjct: 206 ALD 208
>gi|193216516|ref|YP_001999758.1| glucose-inhibited division protein B [Mycoplasma arthritidis
158L3-1]
gi|193001839|gb|ACF07054.1| glucose-inhibited division protein B [Mycoplasma arthritidis
158L3-1]
Length = 173
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYPSI 74
++ + + L +Y+L ++K NL S + + +S+ +FQ L+ +
Sbjct: 18 LNNKQKQDLYDYYYLIETENQKYNLTGFSDEKLICE-GLIESILIFQAITSSILNLDSKV 76
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSG GFP + I + + + E NK+ +FL V+ K + E
Sbjct: 77 VLDIGSGVGFPILPYFIINPTFN---LTIYEPINKRVNFLEMVIAKLNLQNITIKKIRAE 133
Query: 135 APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ D ISARA+++L L+E S L Q
Sbjct: 134 DSKETEKFDFISARAVSELKNLMEISHHLLKQ 165
>gi|119486502|ref|ZP_01620560.1| Glucose inhibited division protein [Lyngbya sp. PCC 8106]
gi|119456404|gb|EAW37535.1| Glucose inhibited division protein [Lyngbya sp. PCC 8106]
Length = 230
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLH----PYP 72
+ + ++ + Y L ++ +NL + E FW +H+ DSL + L +
Sbjct: 21 NWQPTAAQNQQFQCLYEEILTGNQSLNLTRITQPEAFWEKHLWDSLAGIAPLLRGEWDFA 80
Query: 73 SI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
S ID+G+G GFPG+ +I V L++S KK +FL ++ + +F
Sbjct: 81 STVEVIDIGTGAGFPGLPVAIAFPK---SSVMLLDSVRKKITFLESLIADLEIKNSSLFV 137
Query: 130 CRIQEAPQM 138
R ++ Q
Sbjct: 138 GRAEQVNQQ 146
>gi|256827811|ref|YP_003151770.1| glucose-inhibited division protein B [Cryptobacterium curtum DSM
15641]
gi|256583954|gb|ACU95088.1| glucose-inhibited division protein B [Cryptobacterium curtum DSM
15641]
Length = 225
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--SIW 75
Y +S +E + L+ +KK+NL + + + H+EDSL
Sbjct: 2 QYEISSHKQACMEQYLKAVLEVNKKVNLTRIDSFKQGLLLHIEDSLGGLPEFMDALLGPA 61
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA--CRIQ 133
+DLGSGGGFPG+ S+ + L++S KK +R ++ + A R +
Sbjct: 62 LDLGSGGGFPGVPLSLAA----ERPIVLLDSVEKKVKAVRTILSDLNLGSSISAQVGRAE 117
Query: 134 E-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
E A + ++ V+ ARA++ L +L E + P L+
Sbjct: 118 ERALKSPSSFSVVVARAVSSLPSLCELASPLLHN 151
>gi|217033323|ref|ZP_03438754.1| hypothetical protein HP9810_9g76 [Helicobacter pylori 98-10]
gi|216944264|gb|EEC23689.1| hypothetical protein HP9810_9g76 [Helicobacter pylori 98-10]
Length = 178
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQHFLKDK 139
>gi|123966888|ref|YP_001011969.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9515]
gi|123201254|gb|ABM72862.1| putative glucose inhibited division protein B [Prochlorococcus
marinus str. MIT 9515]
Length = 220
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIWIDLGSGGGF 84
+ + + K NL +D+WI V DSL F+ +ID+GSG GF
Sbjct: 3 FQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGCGF 62
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQEAPQ---MI 139
PG +I + E + L++S KK L+ ++++ + V RI+ +
Sbjct: 63 PGFAYAITHPNSE---IYLVDSSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFK 119
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQ 166
+ ++ +ARA+++ T+ EY P L Q
Sbjct: 120 KSFNIATARAVSNPSTVAEYILPMLEQ 146
>gi|298530547|ref|ZP_07017949.1| methyltransferase GidB [Desulfonatronospira thiodismutans ASO3-1]
gi|298509921|gb|EFI33825.1| methyltransferase GidB [Desulfonatronospira thiodismutans ASO3-1]
Length = 212
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 9/161 (5%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL- 68
LR + ++ + ++ L+ + KW++ +NLV S + V DSL +
Sbjct: 6 LREETAALGFELNPQQVQGLQAYLSTLEKWNRSVNLVGPSHWREILHSLVVDSLYLSGFL 65
Query: 69 ----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
H +DLG+G G+ + G L+ES+ K+ +F+R + +
Sbjct: 66 SRIAHQEDIRSLDLGAGA---GLPGLPLRLLWDKGSYYLVESRFKRCAFMRQAISAMGIQ 122
Query: 125 GK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V R+++ P+ I D+I +RA LL + L
Sbjct: 123 NTYVINGRVEDLPRDILPADLIVSRAFMPWKKLLALTVSML 163
>gi|210134579|ref|YP_002301018.1| 16S rRNA methyltransferase GidB [Helicobacter pylori P12]
gi|210132547|gb|ACJ07538.1| glucose inhibited division protein B [Helicobacter pylori P12]
Length = 178
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYVRILLEWNQTHNLSGAKRLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|288921190|ref|ZP_06415476.1| methyltransferase GidB [Frankia sp. EUN1f]
gi|288347397|gb|EFC81688.1| methyltransferase GidB [Frankia sp. EUN1f]
Length = 302
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 17/154 (11%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIW-------- 75
+ LE + L + L+ W RH+ +S + + P +
Sbjct: 51 DRLELAVQYAELLATAGVERGLIGPRETGRLWSRHLLNSAVLAEAVPTAADLPGASGRVP 110
Query: 76 --IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFACR 131
+D+GSG G PG+ ++ + V L+E ++ FL VV + +V R
Sbjct: 111 EVVDVGSGAGLPGVPLALARPDLR---VTLLEPMERRCRFLSEVVAQLGLEEQIEVVRGR 167
Query: 132 IQEAPQMIT--TCDVISARALADLDTLLEYSFPW 163
+ Q DV ARA+A L L P
Sbjct: 168 APDLAQRPPHRDFDVSVARAVAPLGRLGAVLLPM 201
>gi|261837817|gb|ACX97583.1| glucose-inhibited division protein [Helicobacter pylori 51]
Length = 178
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ R + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLRNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|306824001|ref|ZP_07457375.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium ATCC
27679]
gi|309801963|ref|ZP_07696077.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium
JCVIHMP022]
gi|304552999|gb|EFM40912.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium ATCC
27679]
gi|308221411|gb|EFO77709.1| 16S rRNA methyltransferase GidB [Bifidobacterium dentium
JCVIHMP022]
Length = 249
Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 40/178 (22%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KL F+ + + L+ V W RH+ +S + D
Sbjct: 20 DALVKLRIFHDKLAQEGEPRGLIGPRDVSIIWERHILNSAAIVPFVREATVRRQFKTVAD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGGFPGI+ + L L+E ++ +L V V R
Sbjct: 80 IGSGGGFPGIVAAACLPDHR---FTLVEPMERRVEWLNECVNDMGLDNVTVVRSRANAMI 136
Query: 137 QMIT------------------------------TCDVISARALADLDTLLEYSFPWL 164
I V++ RA+A + L ++ P L
Sbjct: 137 DAIRGSKTSRKNRGAISHTTPVLDLDGNPIAISHPFAVVTCRAVAPMTKLSGWTLPLL 194
>gi|294010014|ref|YP_003543474.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Sphingobium japonicum UT26S]
gi|292673344|dbj|BAI94862.1| putative S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Sphingobium japonicum UT26S]
Length = 213
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-- 71
+L ++V R T ++LE + + L + NL++ ST W RH+ DS ++ L
Sbjct: 9 WLQTRFDVPRGTWDRLERYVAVILDEMGRQNLIAESTRPHIWARHIVDSAQLIPLADNAG 68
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
WIDLGSG G PGI+ +I + V ++ES+ K+ FL V+ + VF
Sbjct: 69 DGKWIDLGSGAGLPGIVVAI----LTRRPVEMVESRRKRIDFLNDVIAELGLPNAAVFGG 124
Query: 131 RIQEAP------QMITTCDVISARALADLDTLLEYSFPWLYQK 167
R++ P A L LLE + +K
Sbjct: 125 RVESVPTAAAAVISARAY--------APLPKLLESAEHLADEK 159
>gi|224012793|ref|XP_002295049.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969488|gb|EED87829.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 402
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 65/168 (38%), Gaps = 24/168 (14%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDSLRVFQLH---------- 69
+ + L L+W++++NLVS + RHV S+ + L
Sbjct: 121 PEKAHKALLRLTEQVLQWNQRLNLVSRKDCTASVVYHRHVLPSVGLLPLIVPLLTQQQRD 180
Query: 70 -PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+D+G+GGGFPG+ + L +++ L++S KK + + ++
Sbjct: 181 NAQQLKIVDVGTGGGFPGLPLATLLPNVQ---FTLVDSIQKKLVAVSEMASDLDVNNVRI 237
Query: 128 FACRIQEAP-------QMITTCDVISARALADLDTLLEYSFPWLYQKK 168
R++E + DV+ R++ L + L + K
Sbjct: 238 HHGRVEEMYAGQEGKREHKGRYDVVLGRSVTALPRFCAWVADLLKKGK 285
>gi|317179222|dbj|BAJ57010.1| glucose-inhibited division protein B [Helicobacter pylori F30]
gi|317181726|dbj|BAJ59510.1| glucose-inhibited division protein B [Helicobacter pylori F57]
Length = 178
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|317177196|dbj|BAJ54985.1| glucose-inhibited division protein B [Helicobacter pylori F16]
Length = 178
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|116073720|ref|ZP_01470982.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9916]
gi|116069025|gb|EAU74777.1| putative glucose inhibited division protein B [Synechococcus sp.
RS9916]
Length = 250
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---- 67
A + + S E + E L+W+ ++NL EDFWI + DSL Q
Sbjct: 13 ALWEALGWTPSAEQRHQFEALQQELLRWNARVNLTRLLEREDFWIAQILDSLWPLQDELR 72
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RG 125
P ID+G+GGGFPG+ +I L G + L++S +K + + + + R
Sbjct: 73 TPNAPRRCIDVGTGGGFPGLAVAIALP---GAQLTLVDSVGRKTAAVLAMAEAIGLKERV 129
Query: 126 KVFACRIQ---EAPQMITTCDV 144
++ R++ D+
Sbjct: 130 RIRTERVELTGRDRGCRGQFDL 151
>gi|109947704|ref|YP_664932.1| 16S rRNA methyltransferase GidB [Helicobacter acinonychis str.
Sheeba]
gi|123066175|sp|Q17WP3|RSMG_HELAH RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|109714925|emb|CAJ99933.1| glucose inhibited division protein B [Helicobacter acinonychis str.
Sheeba]
Length = 178
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRMKRAAFLNYLKSVLPLKNIEIVKKRLEEYQNPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLNDK 139
>gi|332673231|gb|AEE70048.1| 16S rRNA methyltransferase GidB [Helicobacter pylori 83]
Length = 178
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLKDK 139
>gi|238650524|ref|YP_002916376.1| glucose-inhibited division protein B [Rickettsia peacockii str.
Rustic]
gi|238624622|gb|ACR47328.1| glucose-inhibited division protein B [Rickettsia peacockii str.
Rustic]
Length = 191
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDL 78
V RE ++KLE F L KW+K INLVS +T+ +FW RH+ DSL++ Q I +D+
Sbjct: 2 EVPREIIKKLEIFQKLVKKWNKSINLVSDNTIHNFWQRHILDSLQLIQYIDNKEIHLVDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG G PGI+ SI V+LIE+ +K FL + + ++ RI++
Sbjct: 62 GSGSGLPGIVLSIAG----VAQVSLIEADLRKCIFLEKASKISNNNIQIINQRIEKVE-- 115
Query: 139 ITTCDVISARALADLDTL 156
C +++ RA ++L+T+
Sbjct: 116 -IDCSILTFRAFSNLNTI 132
>gi|325970665|ref|YP_004246856.1| ribosomal RNA small subunit methyltransferase G [Spirochaeta sp.
Buddy]
gi|324025903|gb|ADY12662.1| Ribosomal RNA small subunit methyltransferase G [Spirochaeta sp.
Buddy]
Length = 219
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+L + ++ + ++L+ + F ++ LV++ + ED IRH+ DSL
Sbjct: 8 LLDEGLSSLSLHLDQGQRDQLDAYIAEFELFNPVYKLVAA-SGEDLVIRHILDSLSGAPT 66
Query: 69 H------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
D GSG G PGI +I L S L+E ++ FLR + + +
Sbjct: 67 LASLCATFASCRIADFGSGAGLPGIPLAIALPS---YSFTLVERMGRRVDFLRNALLRAS 123
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +V ++ ++ DVI+ RA L +L+ P L +
Sbjct: 124 LQDRVRVID-KDLKEVKDQFDVITFRAFHPLADILDLVAPLLGE 166
>gi|297563778|ref|YP_003682752.1| methyltransferase GidB [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848226|gb|ADH70246.1| methyltransferase GidB [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 236
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ L + L+ V W RH+ + V +L P + +D+GSG G PG++
Sbjct: 31 RRYAELLADDGVRRGLIGPREVPRLWERHLINCAVVEELLPEGAEVVDVGSGAGLPGLVL 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+ I + L+E ++ FL V+ +V R +EA + T D ++AR
Sbjct: 91 GLLRPDIR---MVLLEPLLRRTVFLNEAVEILELPNVEVRRGRAEEAHGEVYT-DFVTAR 146
Query: 149 ALADLDTLLEYSFPWLYQ 166
A+A L L +S P L +
Sbjct: 147 AVAPLSRLAGWSLPLLRE 164
>gi|317010660|gb|ADU84407.1| 16S rRNA methyltransferase GidB [Helicobacter pylori SouthAfrica7]
Length = 178
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLNEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + E Q D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRMKRAAFLNYLKSVLPLSNIEIVKKRLEDYQNPLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A+ L+E S +L K
Sbjct: 121 AVANSSFLIEKSQRFLNDK 139
>gi|298736675|ref|YP_003729203.1| ribosomal RNA small subunit methyltransferase G [Helicobacter
pylori B8]
gi|298355867|emb|CBI66739.1| ribosomal RNA small subunit methyltransferase G [Helicobacter
pylori B8]
Length = 178
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKNLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ + L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPETK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQCFLKDK 139
>gi|317012223|gb|ADU82831.1| 16S rRNA methyltransferase GidB [Helicobacter pylori Lithuania75]
Length = 178
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYACILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFVKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|317180720|dbj|BAJ58506.1| glucose-inhibited division protein B [Helicobacter pylori F32]
Length = 178
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + L+W++ NL + + + + D+L+ + +D+GSG G P I
Sbjct: 5 LQDYARILLEWNQTHNLSGAKHLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIP 63
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+++ ++ L+E + K+A+FL Y+ + + E Q + D+I++R
Sbjct: 64 LALEKPEVK---FILLEPRVKRAAFLSYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR 120
Query: 149 ALADLDTLLEYSFPWLYQK 167
A+A L+E S +L K
Sbjct: 121 AVASSSFLIEKSQRFLKDK 139
>gi|163785694|ref|ZP_02180220.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
gi|159879038|gb|EDP73016.1| glucose inhibited division protein B [Hydrogenivirga sp.
128-5-R1-1]
Length = 123
Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
IL+ N +S + LE + + +LKW+ NL S E+ +H DSL + +L
Sbjct: 8 ILKRLCQENYIKISDKQLELFDKYLSFYLKWNNVYNLSSIRKKEEIVKKHFFDSLTLVKL 67
Query: 69 HPYPSI------WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+I D GSG GFPG+ I + ++LIE+ KK FL + ++
Sbjct: 68 FEKTNIELRNKEVADFGSGAGFPGVPLKIYYEDL--INLSLIEAVQKKCIFLEMLKKR 123
>gi|212715143|ref|ZP_03323271.1| hypothetical protein BIFCAT_00029 [Bifidobacterium catenulatum DSM
16992]
gi|212661824|gb|EEB22399.1| hypothetical protein BIFCAT_00029 [Bifidobacterium catenulatum DSM
16992]
Length = 267
Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 55/195 (28%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L K+ F+ ++ + L+ V W RH+ +S + D
Sbjct: 23 DALGKMRVFHAKLVEEGEPRGLIGPRDVAIIWERHILNSAAIVPFVRESTAKKQFKTVAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA- 135
+GSGGGFPGI+ + L + L+E ++ +L V+ V R E
Sbjct: 83 IGSGGGFPGIVAAACLPDHQ---FTLVEPMERRIEWLNECVEDMELENVTVVRARANEMI 139
Query: 136 --------------------------------------------PQMITTCDVISARALA 151
Q V++ RA+A
Sbjct: 140 EAIAGASGVQGGNRGNGNARNGKGGRNGRGAVARGPVLDLDGKPIQARHPFAVVTCRAVA 199
Query: 152 DLDTLLEYSFPWLYQ 166
+ L ++ P L +
Sbjct: 200 PMTKLSGWTLPLLER 214
>gi|284047379|ref|YP_003397719.1| methyltransferase GidB [Conexibacter woesei DSM 14684]
gi|283951600|gb|ADB54344.1| methyltransferase GidB [Conexibacter woesei DSM 14684]
Length = 245
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ D H+ DSL L + DLG+G GFPG+ ++ L + L
Sbjct: 40 TTVRDPRDAVGVHLADSLVALALSDVSDARMIADLGAGAGFPGLPLAVALPEAN---IAL 96
Query: 104 IESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ES +K F+ V A R + + DV++ARALA L + EY+ P
Sbjct: 97 VESIARKCGFIAAAAASAGLTNVDVVAERAEAWADGMGRIDVVTARALAPLGVIAEYAAP 156
Query: 163 WLYQ 166
L +
Sbjct: 157 LLRE 160
>gi|261415842|ref|YP_003249525.1| glucose inhibited division protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372298|gb|ACX75043.1| glucose inhibited division protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 217
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------- 69
+ +S ETL+KL F L + + NL+S+ E F RH+ DSL F
Sbjct: 20 HGVQLSEETLDKLYQFADLVVDTKEYGNLISAKDSEKFLSRHIADSLVPFVFLGKTLSTQ 79
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
W D+G+G G P +I + +++ +E ++ + +F++ V +K V
Sbjct: 80 DDTVRWADMGAGAGCPVFPLAIAMPNVQ---FYAVEPRHMRVNFMQMVKEKLHLDNLTVV 136
Query: 129 ACRIQEAPQMITTCDVISARALA 151
R + + +T D IS RAL+
Sbjct: 137 GKRFETSG--LTDLDFISCRALS 157
>gi|315185861|gb|EFU19626.1| methyltransferase GidB [Spirochaeta thermophila DSM 6578]
Length = 214
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D S+L L + + L + L +W +I+LV+ + E + H+ DSL
Sbjct: 3 DPASLLDRGLALLGLSPTPSQRAALLSYLHLLAEWGSRIDLVADPSPEALVV-HLLDSLA 61
Query: 65 VFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
S DLGSG G PGI +I +E V L+E++ K+A FL +V+
Sbjct: 62 PLPHLRAFLSSPLADLGSGAGLPGIPLAIMNPHLE---VLLVEAREKRAVFLEHVLLSVD 118
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADLD--TLLEYSFPW 163
R V R+++ P + ARA L TL Y P
Sbjct: 119 LARCTVLHARLEDLPLHVP---CAVARAFLPLSPGTLPLYLHPL 159
>gi|295106386|emb|CBL03929.1| 16S rRNA m(7)G-527 methyltransferase [Gordonibacter pamelaeae
7-10-1-b]
Length = 217
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSG 81
+ E ++ + L+ ++K NL S++++ H+EDSL + ++ DLGSG
Sbjct: 2 QHEELIDLYLEKILEANEKTNLTRISSLDEARKLHIEDSLAGLEELNKAPEGLYGDLGSG 61
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMI 139
GGFPG+ +++ G L++S KK + + V+ + + + RI++
Sbjct: 62 GGFPGVPLALE----SGRKTVLVDSVQKKMAIVGSVLSELGIAEQVSTYGGRIEDLAHER 117
Query: 140 T-TCDVISARALADLDTLLEYSFPWL 164
++ARAL+ L L+E + P L
Sbjct: 118 PCAFTALTARALSKLSVLMELASPLL 143
>gi|225352373|ref|ZP_03743396.1| hypothetical protein BIFPSEUDO_03990 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156880|gb|EEG70249.1| hypothetical protein BIFPSEUDO_03990 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 267
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 59/195 (30%), Gaps = 55/195 (28%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KL F+ + + L+ V W RH+ +S + D
Sbjct: 23 DALGKLRVFHAKLAEEGEPRGLIGPRDVGIIWERHILNSAAIVPFVKEATAKKQFKTVAD 82
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGGFPGI+ + L L+E ++ +L V V R E
Sbjct: 83 IGSGGGFPGIVAAACLPDHR---FTLVEPMERRVEWLNECVADMELNNVTVVRARANEMI 139
Query: 137 QMIT---------------------------------------------TCDVISARALA 151
+ I V++ RA+A
Sbjct: 140 EAIAGATGAQGGNRGNGSARNGKGGKNGRGVAVRGPVLDLDGKPIQAKHPFAVVTCRAVA 199
Query: 152 DLDTLLEYSFPWLYQ 166
+ L ++ P L +
Sbjct: 200 PMTKLSGWTLPLLER 214
>gi|293363890|ref|ZP_06610626.1| 16S rRNA methyltransferase GidB [Mycoplasma alligatoris A21JP2]
gi|292552380|gb|EFF41154.1| 16S rRNA methyltransferase GidB [Mycoplasma alligatoris A21JP2]
Length = 230
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---PYPSIWIDLGSGG 82
E LE ++ L + +K +NL + W + +SL +D+G+G
Sbjct: 18 FEDLEKYFSLVTETNKVLNLTGF-EGDKLWEEGIYESLLFIDKIVTKTDSKTLLDIGAGA 76
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT 140
GFP I +I +++ + + E K+ FL VV + ++FA R ++
Sbjct: 77 GFPSIPYAIVNKNLK---ITIYEPIKKRVDFLNTVVDTLSLEKNVQIFALRAEDVKD-KN 132
Query: 141 TCDVISARALADLDTLL 157
D+++ARA+ D+ T+L
Sbjct: 133 CFDLVTARAVGDVSTML 149
>gi|315453598|ref|YP_004073868.1| glucose-inhibited division protein B GidB [Helicobacter felis ATCC
49179]
gi|315132650|emb|CBY83278.1| glucose-inhibited division protein B; GidB [Helicobacter felis ATCC
49179]
Length = 180
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ F L L+W++ L + + + DS+RV +D+GSG GFP I
Sbjct: 6 LDRFSALLLEWNRTHALSGAKHLTQV-QAQITDSVRVLDFIQPFKTCLDIGSGAGFPAIP 64
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCDVISA 147
+I L+E KK +FL +V A R+Q+ P M + ++I++
Sbjct: 65 LAIHCPKAH---FTLLEPNAKKIAFLHHVKMTLALDNITLKRVRLQDLPPM--SVELITS 119
Query: 148 RALADLDTLLEYSFPWL 164
RAL L+ S P+L
Sbjct: 120 RALMGAQELITLSTPFL 136
>gi|302328144|gb|ADL27345.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 264
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 6 SNSILRANYLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ S+ + LL+ Y + ++TL+++ F+ L + +L + E RH D
Sbjct: 52 TPSLAGLDKLLHYYGVELQQDTLKQIWEFHQLLRANNDDQDLTRLNAFETMVERHYADCT 111
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P P+ ID+GSG GFPGI I SI + L E + + +FL V++K
Sbjct: 112 LINAYVPKWPARMIDVGSGAGFPGIPLKIVNPSIR---LTLCEPRPNRINFLNMVIEKMG 168
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+G + M D + +RA L+E + P
Sbjct: 169 LKGIDVFGHKVTSRSMTIPVDGVISRAF----ELMEKTLP 204
>gi|261749369|ref|YP_003257054.1| glucose-inhibited division protein B [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
gi|261497461|gb|ACX83911.1| glucose-inhibited division protein B [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 203
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ + + KL L+ W+ +NL+S T +F+ +HV L + ++ + S +D
Sbjct: 10 DLLDQQIYKLSSLKKLYAYWNAYVNLISRKTFHNFYQQHVLFCLGIAKVFTFFPGSCVMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
LG+GGGFPGI SI E L++S +KK + ++ + R ++
Sbjct: 70 LGTGGGFPGIPLSIVFPHTE---FILVDSISKKIKIVEKIIYNLNIKNAYTICIRAEKLE 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + +RA+A + + +
Sbjct: 127 N---KFDFVVSRAVAKISKIHNW 146
>gi|33862031|ref|NP_893592.1| putative glucose inhibited division protein B [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|55976486|sp|Q7V016|RSMG_PROMP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33634249|emb|CAE19934.1| putative glucose inhibited division protein B [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 239
Score = 109 bits (274), Expect = 9e-23, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSIWIDLGSGGGF 84
+ + K NL +D+WI V DSL F+ + +ID+GSG GF
Sbjct: 22 FRELQIKIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENTNKNFDNKKFIDIGSGCGF 81
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFACRIQEAPQ---MI 139
PG +I + E + L++S KK L+ +++ + V RI+ +
Sbjct: 82 PGFAYAITHPNSE---IYLVDSSKKKTDSLKEIIKSIKFKNDIFVINDRIENIGRQSSFK 138
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
++ +ARA+++ T+ EY P L
Sbjct: 139 NGFNIATARAVSNPSTVSEYILPMLK 164
>gi|78357336|ref|YP_388785.1| methyltransferase GidB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|123552126|sp|Q30Z06|RSMG_DESDG RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|78219741|gb|ABB39090.1| 16S rRNA m(7)G-527 methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 229
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 9/148 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI- 76
+ + + L + + KWS +NLV T + + DSL + +
Sbjct: 21 GFRLPPAAVTGLTVYLNMLQKWSAVMNLVGPRTWQPMVRTLIVDSLHLDRFLRDAVPQCG 80
Query: 77 ----DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR 131
D G+G G PGI + + G ++++ + K+ F++ V+ + G V R
Sbjct: 81 PQIWDFGAGAGLPGIPLRMV---WQHGEYHMVDVREKRTMFMQMVLARHPLSGTFVHRAR 137
Query: 132 IQEAPQMITTCDVISARALADLDTLLEY 159
+++ D++ +RA LL
Sbjct: 138 VEDFMADRAPADMLVSRAFMPWPELLSL 165
>gi|94312436|ref|YP_585646.1| 16S rRNA methyltransferase GidB [Cupriavidus metallidurans CH34]
gi|189040713|sp|Q1LHJ9|RSMG_RALME RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|93356288|gb|ABF10377.1| methyltransferase, SAM-dependent methyltransferase,
glucose-inhibited cell-division protein [Cupriavidus
metallidurans CH34]
Length = 235
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 14/168 (8%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A ++ ++ L + L KW+ NL + ++ H+ DSL
Sbjct: 18 LEAGLDAIGLALTPAQVDTLFAYLTLLRKWNGVYNLTAIRHPDEMLTHHLLDSLTAVPAL 77
Query: 70 PYPSIWIDLGSGG-----------GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ ++ G G PG+ +I + V +++ KK +FL
Sbjct: 78 AEAARSANVAQGARGRVLDVGSGGGMPGMPLAISCPDV---SVLMVDIVQKKTAFLTQCR 134
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ E VI++RA A+L + S L
Sbjct: 135 AQLHLTNAAAHWGPVEKIDDEQGYAVITSRAFAELTDFVTLSGHLLAP 182
>gi|308179185|ref|YP_003918591.1| glucose-inhibited division protein B [Arthrobacter arilaitensis
Re117]
gi|307746648|emb|CBT77620.1| glucose-inhibited division protein B [Arthrobacter arilaitensis
Re117]
Length = 213
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A L + + L+ + + + L+ V W RHV + + ++
Sbjct: 7 LTAEETLAAEKIFGDRLDLAKRYVEHLATSGIERGLLGPREVPRLWSRHVLNCAVIEEVM 66
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
+ D+GSG G PG+ +I + ++ + LIE ++ +L V+ V
Sbjct: 67 EKDAEVADVGSGAGLPGLCLAIARADLK---LTLIEPLERRCIWLSEVIDDLGLTNVTVM 123
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R ++ ++ ++ARA++ L L + P L+
Sbjct: 124 RGRAEQMVDVVNAR-YVTARAVSALTNLAGLTIPLLH 159
>gi|305431986|ref|ZP_07401153.1| 16S rRNA methyltransferase GidB [Campylobacter coli JV20]
gi|304445070|gb|EFM37716.1| 16S rRNA methyltransferase GidB [Campylobacter coli JV20]
Length = 199
Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
N +L+ +N + KL+ + + K+++ NL +++ ++ DS+ + + +
Sbjct: 6 LNLILSDFN-EEDFRAKLKIYKEILNKFNRIHNLTQLKNIDE----NILDSIEILKYFDF 60
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSG GFP I + L +L E KKA+FLR + +
Sbjct: 61 SKAKNIVDIGSGAGFPAIFLAFILP----SNFHLFEPNPKKAAFLRSIKIECNLTNLTVY 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSF 161
E + D+I++RAL D+ L++
Sbjct: 117 KEKVENYKSSFKADIITSRALMDVKPLIKLCL 148
>gi|283457084|ref|YP_003361648.1| Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium dentium Bd1]
gi|283103718|gb|ADB10824.1| GidB Methyltransferase gidB (Glucose inhibited division protein B)
[Bifidobacterium dentium Bd1]
Length = 227
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 55/174 (31%), Gaps = 40/174 (22%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWIDLGSG 81
KL F+ + + L+ V W RH+ +S + D+GSG
Sbjct: 2 KLRIFHDKLAQEGEPRGLIGPRDVGIIWERHILNSAAIVPFVREATVRRQFKTVADIGSG 61
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMIT 140
GGFPGI+ + LS L+E ++ +L V V R I
Sbjct: 62 GGFPGIVAAACLSDHR---FTLVEPMERRVEWLNECVNDMGLDNVTVVRSRANAMIDAIR 118
Query: 141 ------------------------------TCDVISARALADLDTLLEYSFPWL 164
V++ RA+A + L ++ P L
Sbjct: 119 GSKTSRKNRGAISHTTPVLDLDGNPIATSHPFAVVTCRAVAPMTKLSGWTLPLL 172
>gi|261415517|ref|YP_003249200.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371973|gb|ACX74718.1| methyltransferase GidB [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 214
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 6 SNSILRANYLLNTY--NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ S+ + LL+ Y + ++TL+++ F+ L + +L + E RH D
Sbjct: 2 TPSLAGLDKLLHYYGVELQQDTLKQIWEFHQLLRANNDDQDLTRLNAFETMVERHYADCT 61
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P P+ ID+GSG GFPGI I SI + L E + + +FL V++K
Sbjct: 62 LINAYVPKWPARMIDVGSGAGFPGIPLKIVNPSIR---LTLCEPRPNRINFLNMVIEKMG 118
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+G + M D + +RA L+E + P
Sbjct: 119 LKGIDVFGHKVTSRSMTIPVDGVISRAF----ELMEKTLP 154
>gi|299473123|emb|CBN78699.1| glucose-inhibited division protein B [Ectocarpus siliculosus]
Length = 465
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
+S E K+ L +W+ K+NL+S + + RHV L + + + + +D
Sbjct: 222 ELSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDGTYVLD 281
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+G+GGG PG+ +I ++ LI+ KK + + + + F R +E
Sbjct: 282 VGTGGGLPGLPLAICFPKVK---FTLIDGTGKKIKAVADMADRLGLTNVRTFHVRAEEVY 338
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + RA+ +L + +
Sbjct: 339 ---EAFDFVMGRAVTNLPKFVGF 358
>gi|116748593|ref|YP_845280.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
gi|193806435|sp|A0LHE3|RSMG2_SYNFM RecName: Full=Ribosomal RNA small subunit methyltransferase G 2;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 2; Short=16S rRNA m7G
methyltransferase 2
gi|116697657|gb|ABK16845.1| methyltransferase GidB [Syntrophobacter fumaroxidans MPOB]
Length = 498
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ A ++ + +L ++ L +++ ++NL + ++ DSL
Sbjct: 14 APGPDEMSAILRRCGIRLAPARIGQLWTYHQLLREFNPELNLTRIHNFANMVLKLYVDSL 73
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
L PS +DLG+G G PGI I + +E + L ES+ K+A+FL+ V++
Sbjct: 74 LPMNLVELPSPLMDLGTGPGMPGIPIKIAMPELE---IVLAESRQKRAAFLKMAVERLKL 130
Query: 124 -RGKVFACRIQEAPQMITTCDVISARAL 150
+ +V + + ++ + RA+
Sbjct: 131 EKVEVVGKSVGSSFEVPVK--GVITRAV 156
>gi|171741739|ref|ZP_02917546.1| hypothetical protein BIFDEN_00830 [Bifidobacterium dentium ATCC
27678]
gi|171277353|gb|EDT45014.1| hypothetical protein BIFDEN_00830 [Bifidobacterium dentium ATCC
27678]
Length = 249
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 40/178 (22%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIWID 77
+ L KL F+ + + L+ V W RH+ +S + D
Sbjct: 20 DALVKLRIFHDKLAQEGEPRGLIGPRDVGIIWERHILNSAAIVPFVREATVRRQFKTVAD 79
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+GSGGGFPGI+ + LS L+E ++ +L V V R
Sbjct: 80 IGSGGGFPGIVAAACLSDHR---FTLVEPMERRVEWLNECVNDMGLDNVTVVRSRANAMI 136
Query: 137 QMIT------------------------------TCDVISARALADLDTLLEYSFPWL 164
I V++ RA+A + L ++ P L
Sbjct: 137 DAIRGSKTSRKNRGAISHTTPVLDLDGNPIATSHPFAVVTCRAVAPMTKLSGWTLPLL 194
>gi|307718007|ref|YP_003873539.1| methyltransferase [Spirochaeta thermophila DSM 6192]
gi|306531732|gb|ADN01266.1| putative methyltransferase [Spirochaeta thermophila DSM 6192]
Length = 214
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D S+L L + + L + L +W +I+LV+ + E + H+ DSL
Sbjct: 3 DPASLLDRGLALLGLSPTPSQRAALLSYLHLLAEWGARIDLVADPSPEALAV-HLLDSLA 61
Query: 65 VFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
S DLGSG G PGI +I +E V L+E++ K+A FL +V+
Sbjct: 62 PLPHLRALLSSPLADLGSGAGLPGIPLAIMNPHLE---VLLVEARGKRAVFLEHVLLSVD 118
Query: 123 A-RGKVFACRIQEAPQMITTCDVISARALADL--DTLLEYSFPW 163
R V R+++ P + ARA L DTL Y P
Sbjct: 119 LARCTVLHARLEDLPLHVP---CAVARAFLPLSPDTLPLYLHPL 159
>gi|170783397|ref|YP_001711731.1| 16S rRNA methyltransferase GidB [Clavibacter michiganensis subsp.
sepedonicus]
gi|189039493|sp|B0RDP8|RSMG_CLAMS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|169157967|emb|CAQ03177.1| cell division methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 211
Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
F +++ L+ W RH+ +S+ V L P + D+G+G G PG++
Sbjct: 26 REFASQLGSRGEELGLIGPLEPPRLWSRHIINSVLVAPLLN-PGVVGDIGTGAGLPGLVL 84
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISAR 148
+I ++ LIE ++ ++L V V R ++ I + D ++AR
Sbjct: 85 AIARPDVD---FVLIEPMERRVAWLEEQVAHLGLDNVQVRRARAEDVANEI-SLDQVTAR 140
Query: 149 ALADLDTLLEYSFPWLY 165
A++ L+ + P +
Sbjct: 141 AVSAFSKLIPLTVPLVK 157
>gi|57168863|ref|ZP_00367993.1| methyltransferase GidB [Campylobacter coli RM2228]
gi|57019699|gb|EAL56385.1| methyltransferase GidB [Campylobacter coli RM2228]
Length = 194
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
N +L+ +N + KL+ + + K+++ NL +++ ++ DS+ + + +
Sbjct: 6 LNLILSDFN-EEDFRAKLKIYKEILNKFNRIHNLTQLKNIDE----NILDSIEILKYFDF 60
Query: 72 --PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+GSG GFP I + L +L E KKA+FLR + +
Sbjct: 61 SKAKNIVDIGSGAGFPAIFLAFILP----SNFHLFEPNPKKAAFLRSIKIECNLTNLTVY 116
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSF 161
E + D+I++RAL D+ L++
Sbjct: 117 KEKVENYKSSFKADIITSRALMDVKPLIKLCL 148
>gi|218660236|ref|ZP_03516166.1| glucose-inhibited division protein B [Rhizobium etli IE4771]
Length = 139
Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/89 (55%), Positives = 67/89 (75%)
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
SGGGFPG+IT+I L+ ++ G V+L+ES +KKA+FLR +++T ARG V A RI++A I
Sbjct: 1 SGGGFPGVITAIFLAELQDGWVHLVESNHKKAAFLRTALRETNARGSVHAIRIEDAHAEI 60
Query: 140 TTCDVISARALADLDTLLEYSFPWLYQKK 168
CD ISARALADLD L+ Y+ PW+ K+
Sbjct: 61 GECDAISARALADLDGLIGYAAPWMLGKE 89
>gi|33865160|ref|NP_896719.1| 16S rRNA methyltransferase GidB [Synechococcus sp. WH 8102]
gi|55976484|sp|Q7U8J1|RSMG_SYNPX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|33638844|emb|CAE07141.1| putative glucose inhibited division protein B [Synechococcus sp. WH
8102]
Length = 248
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH-- 69
A + + L +L+ L W+ ++NL +D+WI V DSL Q
Sbjct: 14 AFWEALGWTPEPAQLGQLKALQDLLRSWNSRVNLTRLVEGDDYWINQVFDSLWPLQTELR 73
Query: 70 -PYPSIW-IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RG 125
P+ S ID+G+GGGFPG+ +I + G + L++S +K + ++ +V R
Sbjct: 74 SPHQSRLAIDVGTGGGFPGLAVAIAMP---GARMTLLDSVGRKTAAVQAMVNDLGLSDRV 130
Query: 126 KVFACRIQEAPQ---MITTCDV 144
V RI+ A + D+
Sbjct: 131 SVRTDRIESAGHDRTLRGGFDL 152
>gi|86606331|ref|YP_475094.1| 16S rRNA methyltransferase GidB [Synechococcus sp. JA-3-3Ab]
gi|123506189|sp|Q2JTZ8|RSMG_SYNJA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|86554873|gb|ABC99831.1| methyltransferase GidB [Synechococcus sp. JA-3-3Ab]
Length = 260
Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-------QLHPYPSIWIDLGSGGGFP 85
Y L + ++ NL + DFW +H+ DSLR ++ P ID+G+G GFP
Sbjct: 41 YSLVMAGNRTQNLTRITDPIDFWEKHLWDSLRGLRLLGSWDEIQAQPWRGIDIGTGAGFP 100
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA----PQMITT 141
GI I L L++S +K +F++ V+Q+ + + E PQ +
Sbjct: 101 GIPAQIALPQAH---FTLLDSSQRKIAFVQEVLQQLSLAQARAVAQRAEIWGQDPQERGS 157
Query: 142 CDVISARALADLDTLLEYSFPWLY 165
D+ ARA+A + EY P L
Sbjct: 158 YDLALARAVAAAEICAEYCLPLLK 181
>gi|154250443|ref|YP_001411268.1| methyltransferase GidB [Fervidobacterium nodosum Rt17-B1]
gi|189039388|sp|A7HNX8|RSMG_FERNB RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|154154379|gb|ABS61611.1| methyltransferase GidB [Fervidobacterium nodosum Rt17-B1]
Length = 213
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E E + + + + INL + ++ DS+ + ++D+G+GGG
Sbjct: 2 EKTEIVRKYVEKLI--NSPINLTAYKDFDEAMAFLYLDSVLPVKSEDLGEFFLDIGTGGG 59
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAP---QMI 139
PG+ S++ L++S KK F++ ++ + + R +E
Sbjct: 60 VPGVFLSVEFDKKG----LLVDSICKKVHFIQQTCKELGIKKVETLCARAEELKGKGDFF 115
Query: 140 TTCDVISARALADLDTLLEYSFPWLY 165
D +RA++ + T+LE + P++
Sbjct: 116 EKFDSAVSRAVSKIATVLELTAPYVK 141
>gi|148274157|ref|YP_001223718.1| 16S rRNA methyltransferase GidB [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166224582|sp|A5CVC1|RSMG_CLAM3 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|147832087|emb|CAN03060.1| putative methyltransferase, cell division protein [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 211
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 13/150 (8%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ +V+RE +L L+ W RHV +S+ V L P +
Sbjct: 20 DRIDVAREFTAQLGQRGEEL-------GLIGPLEPPRLWSRHVINSVLVAPLL-RPGLVG 71
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEA 135
D+G+G G PG++ +I ++ LIE ++ ++L V A V R +E
Sbjct: 72 DIGTGAGLPGLVLAIARPDVD---FVLIEPMERRVAWLEEQVAHLALGNVSVRRARAEEV 128
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
Q D ++ARA++ L+ + P +
Sbjct: 129 AQEF-NLDQVTARAVSAFAKLIPLTVPLVK 157
>gi|108805990|ref|YP_645927.1| methyltransferase GidB [Rubrobacter xylanophilus DSM 9941]
gi|123365716|sp|Q1AR63|RSMG_RUBXD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|108767233|gb|ABG06115.1| methyltransferase GidB [Rubrobacter xylanophilus DSM 9941]
Length = 261
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ N++ + E + HV DS P D+GSGGG PGI I L
Sbjct: 54 RRANVIGTREPETVLLEHVLDSASCLLFEPLRAAGRVADVGSGGGLPGIPLKILLPEAR- 112
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ---EAPQMITTCDVISARALADLD 154
V LIES KKA FLRY ++ G V R++ + D ARA+A L
Sbjct: 113 --VVLIESTGKKADFLRYAIESLGLSGVDVVNARVEAVAREAAHRSRYDAALARAVAALP 170
Query: 155 TLLEYSFPWLY 165
L EY P L
Sbjct: 171 VLAEYCVPLLR 181
>gi|94265413|ref|ZP_01289165.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
[delta proteobacterium MLMS-1]
gi|93454070|gb|EAT04405.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
[delta proteobacterium MLMS-1]
Length = 463
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 47/178 (26%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP----------------- 72
E ++ LKW +++NLV+ + + H DSL + L +
Sbjct: 229 ELYFRELLKWHRRVNLVARAPEPELLELHFLDSLTILPLCRFEPPPTGSPVVTDHEVRLP 288
Query: 73 -----------------------SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+D+GSG GFPG++ + + L+E + K
Sbjct: 289 PVAPSPARTAAGLPGTADSAKDAGSLLDIGSGAGFPGLVLKCCRPEL---ALTLLEPRQK 345
Query: 110 KASFLRYVVQKTAARG--KVFACRIQEAPQMITT--CDVISARALADLDTLLEYSFPW 163
+ +FLR V++ T + +V A R+ + +I+ RA+A + L+ P
Sbjct: 346 RVAFLRQVLRVTGLKAGCEVLAQRLVPGGGALAQRRWPLITGRAVASVADFLDLCAPL 403
>gi|294155312|ref|YP_003559696.1| S-adenosyl-L-methionine dependent methyltransferase [Mycoplasma
crocodyli MP145]
gi|291600437|gb|ADE19933.1| S-adenosyl-L-methionine dependent methyltransferase [Mycoplasma
crocodyli MP145]
Length = 232
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 10/147 (6%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIWIDLGSGG 82
+ + ++ + + +K +NL + W + +SL P+ +D+G+G
Sbjct: 18 FQNFDTYFQMIEETNKVLNLTGF-EGDKLWQEGIYESLVFMLEVTETIKPNNILDIGAGA 76
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMIT 140
GFP I ++ + + + E K+ FL V+ K +VF R ++ +
Sbjct: 77 GFPSIPYALTNPKQK---ITIYEPLKKRVDFLNQVITKLNLNNSVEVFPFRSEDIKK-KN 132
Query: 141 TCDVISARALADLDTLLEYSFPWLYQK 167
D+++ARA+ D+ T+L SF + K
Sbjct: 133 IFDLVTARAVGDVATMLMSSFHLVSLK 159
>gi|302840158|ref|XP_002951635.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
gi|300263244|gb|EFJ47446.1| hypothetical protein VOLCADRAFT_46111 [Volvox carteri f.
nagariensis]
Length = 168
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G G PG++ ++ + V L++S K+ FLR + +V CR
Sbjct: 2 RLLDVGTGAGLPGMVLAVARPQWK---VTLLDSLRKRCEFLREAAARAGLDNVEVVWCRA 58
Query: 133 QEA---PQMITTCDVISARALADLDTLLEYSFPWLY 165
++A P++ D+ ARA+A+ L E P++
Sbjct: 59 EDAGRRPELRQAYDIAIARAVAEARVLAELCLPFVR 94
>gi|157415254|ref|YP_001482510.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81116]
gi|172047135|sp|A8FM46|RSMG_CAMJ8 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|157386218|gb|ABV52533.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81116]
gi|315932124|gb|EFV11067.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 327]
Length = 188
Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFEEKIKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPAVFLAFLL----QNNFHLFEPNPKKAAFLRTLKIECELSN 111
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ Q I D+I++RAL D+ LLE
Sbjct: 112 LHIYKEKVQEYQNIFKADIITSRALMDVKPLLEIC 146
>gi|57237822|ref|YP_179070.1| methyltransferase GidB [Campylobacter jejuni RM1221]
gi|73621005|sp|Q5HUG5|RSMG_CAMJR RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|57166626|gb|AAW35405.1| methyltransferase GidB [Campylobacter jejuni RM1221]
Length = 188
Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L G +L E KKA+FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPAVFLAFLL----QGNFHLFEPNPKKAAFLRTLKIECELSN 111
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ Q I D+I++RAL D+ LLE
Sbjct: 112 LHIYKEKVQEYQNIFKADIITSRALMDVKPLLEIC 146
>gi|50955951|ref|YP_063239.1| glucose-inhibited division protein B [Leifsonia xyli subsp. xyli
str. CTCB07]
gi|55976375|sp|Q6ABV7|RSMG_LEIXX RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|50952433|gb|AAT90134.1| glucose-inhibited division protein B [Leifsonia xyli subsp. xyli
str. CTCB07]
Length = 209
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ + W RH+ +S V L P + D+GSG G PG++ +I + LI
Sbjct: 39 LIGPLELPRLWSRHILNSAIVAPLL-RPGVVGDVGSGAGLPGLVLAIARPDVS---FVLI 94
Query: 105 ESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
E +++ +L V + + R ++A ++ D ++ARA++ LL + P
Sbjct: 95 EPMDRRVIWLNEQVAELGLLNVDIVRARAEDA-KLAKPLDQVTARAVSAFRKLLPLTAPL 153
Query: 164 LYQ 166
L
Sbjct: 154 LRD 156
>gi|307747896|gb|ADN91166.1| Ribosomal RNA small subunit methyltransferase G [Campylobacter
jejuni subsp. jejuni M1]
Length = 188
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPAVFLAFLL----QNNFHLFEPNPKKAAFLRTLKIECELSN 111
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ Q I D+I++RAL D+ LLE
Sbjct: 112 LHIYKEKVQEYQNIFKADIITSRALMDVKPLLEIC 146
>gi|86150893|ref|ZP_01069109.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 260.94]
gi|315124485|ref|YP_004066489.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85842063|gb|EAQ59309.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 260.94]
gi|315018207|gb|ADT66300.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 188
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELSN 111
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ Q I D+I++RAL D+ LLE
Sbjct: 112 LHIYKEKVQEYQNIFKADIITSRALMDVKPLLEIC 146
>gi|269115129|ref|YP_003302892.1| methyltransferase gidB [Mycoplasma hominis]
gi|268322754|emb|CAX37489.1| Methyltransferase gidB [Mycoplasma hominis ATCC 23114]
Length = 238
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 10/150 (6%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP------SIW 75
S+E L+KL +Y L + + K NL E + +S+ +F
Sbjct: 19 SKEVLKKLYEYYQLIEQENSKYNLTGFYN-EKLLKEAIIESILIFLDIEKNICNLTNKSV 77
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFP + I + + + E ++K+ +FL V + + E
Sbjct: 78 LDIGSGAGFPILPYFIY---KQDFSLTIYEPQSKRVNFLNLVKNELKLKNIDIQKIRAED 134
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
I D ISARA+++L LLE S L
Sbjct: 135 SNQIECFDFISARAVSELKNLLEISHHLLK 164
>gi|86152702|ref|ZP_01070907.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612782|ref|YP_001000676.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|148926093|ref|ZP_01809779.1| gidB like protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|167005598|ref|ZP_02271356.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|205356708|ref|ZP_03223469.1| gidB [Campylobacter jejuni subsp. jejuni CG8421]
gi|166224579|sp|A1VZY5|RSMG_CAMJJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85843587|gb|EAQ60797.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87249119|gb|EAQ72080.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 81-176]
gi|145845572|gb|EDK22664.1| gidB like protein [Campylobacter jejuni subsp. jejuni CG8486]
gi|205345446|gb|EDZ32088.1| gidB [Campylobacter jejuni subsp. jejuni CG8421]
Length = 188
Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELPN 111
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
++ ++QE D+I++RAL D+ LLE
Sbjct: 112 LHIYKEKVQEYKNTF-KADIITSRALMDVKPLLEIC 146
>gi|302340302|ref|YP_003805508.1| methyltransferase GidB [Spirochaeta smaragdinae DSM 11293]
gi|301637487|gb|ADK82914.1| methyltransferase GidB [Spirochaeta smaragdinae DSM 11293]
Length = 223
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 15/169 (8%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+++ ++ +K E + L W++K+ LV +V++ RH+ DSL
Sbjct: 1 MRELIKQALDAVAWSFDASMAQKCEVYLKELLFWNRKVGLVKMESVDELVFRHLYDSLAP 60
Query: 66 FQLHPYPSIW-------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
L + +D+GSGGGFP I ++ L E L+E +KA FL+ V
Sbjct: 61 LPLLEASGLLPGPGSGVVDIGSGGGFPAIPLALALPRYE---YTLVERSGRKAGFLQNAV 117
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+V ++ +A + + + RA ++ + P L +
Sbjct: 118 ALLGVADRVHILQV-DAETLGARWQLATCRAFRPVNE----ALPILAGR 161
>gi|153952100|ref|YP_001397922.1| methyltransferase GidB [Campylobacter jejuni subsp. doylei 269.97]
gi|166224578|sp|A7H342|RSMG_CAMJD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152939546|gb|ABS44287.1| methyltransferase GidB [Campylobacter jejuni subsp. doylei 269.97]
Length = 188
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFGEKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L +L E KK +FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKTAFLRTLKIECELSN 111
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
++ ++QE D+I++RAL D+ LLE
Sbjct: 112 LHIYKEKVQEYKNTF-KADIITSRALMDIKPLLEIC 146
>gi|315058440|gb|ADT72769.1| Ribosomal RNA small subunit methyltransferase G [Campylobacter
jejuni subsp. jejuni S3]
Length = 188
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELPN 111
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + + D+I++RAL D+ LLE
Sbjct: 112 LHIYKKKVQEYKNTFKADIITSRALMDVKPLLEIC 146
>gi|223038816|ref|ZP_03609108.1| 16S rRNA methyltransferase GidB [Campylobacter rectus RM3267]
gi|222879789|gb|EEF14878.1| 16S rRNA methyltransferase GidB [Campylobacter rectus RM3267]
Length = 185
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSI 74
++ R+ + F + K+++ +L S + + + DS+ ++ P
Sbjct: 2 KIDLPRDFDAQTAKFSEILAKFNRVHSLTSYKNLNE----QIADSIAPLEIFPQIWGAKT 57
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
ID+GSG GFP I ++ L E +L E KK+SFL YV + V AC+I+
Sbjct: 58 AIDVGSGAGFPAIFLAMILRECEW---HLFEPSPKKSSFLSYVKAELNLTNVCVKACKIE 114
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
+ +I++RAL LL
Sbjct: 115 DGEPFTAQ--LITSRALMKTKDLLGIC 139
>gi|304372919|ref|YP_003856128.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyorhinis HUB-1]
gi|304309110|gb|ADM21590.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyorhinis HUB-1]
Length = 204
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
Query: 21 VSRETL-EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIW 75
V+ E + +LE F L + +K +NL + + W + +S+ + L
Sbjct: 12 VNNEQIFSQLEKFVSLIEQKNKVMNLTGFT-QDQLWKEGIYESIITLKQSIDLKNKKIAL 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G+G GFP I I S I+ + ++E K+ FL+ V Q+ ++ A
Sbjct: 71 LDVGAGAGFPSIPFFIINSDIK---LVIVEKLKKRCDFLQLVKQELNLDFEIIND---LA 124
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
+ D I+ARA+ +LD L + +
Sbjct: 125 SNLQAKFDYITARAVGNLDFLFKIT 149
>gi|319944932|ref|ZP_08019194.1| glucose inhibited division protein B [Lautropia mirabilis ATCC
51599]
gi|319741502|gb|EFV93927.1| glucose inhibited division protein B [Lautropia mirabilis ATCC
51599]
Length = 341
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L+ + + K+ + L +W++ NL+ +S H+ DSL + +
Sbjct: 22 LQEGLQRLSVTLDETAFAKVVQWARLLKQWNRTFNLLGNSDSAHLIDEHLLDSLAIVPVL 81
Query: 70 PY-----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+G+G GFPGI+ +I + L+E KK +FLR V +
Sbjct: 82 ERYLPRPEEALVDVGTGAGFPGILLAIVQPQ---RPIYLVEPVGKKVAFLRQSVLTLGLK 138
Query: 125 G-KVFACRIQEAPQM 138
V A +I++ +
Sbjct: 139 NATVLAGKIEDLESL 153
>gi|257460988|ref|ZP_05626088.1| 16S rRNA methyltransferase GidB [Campylobacter gracilis RM3268]
gi|257441651|gb|EEV16794.1| 16S rRNA methyltransferase GidB [Campylobacter gracilis RM3268]
Length = 192
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDLGSGGGFP 85
E++ F K+++ +L + ++ V DSL P YP I D+GSG GFP
Sbjct: 11 EQVAKFKACLQKFNRVHSLTNYDDLDAV----VCDSLSGVNFIPRYPRIACDIGSGAGFP 66
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDV 144
GI ++ + E +L E KKA+FL Y A + A R+Q+ ++ D+
Sbjct: 67 GIFLALAMPLCEW---HLFEPNQKKAAFLTYAKVSLALTNVKIHAERVQDGAKLR--ADL 121
Query: 145 ISARALADLDTLLEYS 160
IS+RAL +L+E
Sbjct: 122 ISSRALMSAQSLIEIC 137
>gi|42525228|ref|NP_970608.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
gi|81829095|sp|Q6MGL7|RSMG3_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 3;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 3; Short=16S rRNA m7G
methyltransferase 3
gi|39577439|emb|CAE81262.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
Length = 221
Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL----RVFQLHPYPSIW 75
++S + +L+ ++ LK+++ +NL+S+ TV H DS+ + + +P
Sbjct: 22 DLSPDLRTRLKTYHEELLKFNRTLNLISAKTVFVADALHFADSIMASQAIMKSNPSLDKI 81
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQE 134
DLGSG GFPG+I ++ ++ V L+E KK FL +V R I+
Sbjct: 82 YDLGSGNGFPGMIFALLYPKVQ---VVLVEFDQKKCEFLNHVAGVLKLSNVTVENRTIES 138
Query: 135 APQMITTCDVISARALADLDT 155
P + AR LA++
Sbjct: 139 FPDGSMKY--VMARGLANISK 157
>gi|86150497|ref|ZP_01068722.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596347|ref|ZP_01099584.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 84-25]
gi|218562613|ref|YP_002344392.1| putative methyltransferase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|20177911|sp|Q9PNU3|RSMG_CAMJE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|85839092|gb|EAQ56356.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191188|gb|EAQ95160.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360319|emb|CAL35115.1| putative methyltransferase (GidB homolog) [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|284926227|gb|ADC28579.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni IA3902]
gi|315928356|gb|EFV07671.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930919|gb|EFV09900.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 305]
Length = 188
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPVVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELPN 111
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
++ ++QE D+I++RAL D+ LLE
Sbjct: 112 LHIYKEKVQEYKNTF-KADIITSRALMDVKPLLEIC 146
>gi|255322058|ref|ZP_05363206.1| 16S rRNA methyltransferase GidB [Campylobacter showae RM3277]
gi|255300871|gb|EET80140.1| 16S rRNA methyltransferase GidB [Campylobacter showae RM3277]
Length = 185
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSI 74
++ R+ + F + K+++ +L S + + + DS+ ++ P
Sbjct: 2 KIDLPRDFDAQTAKFSEILAKFNRVHSLTSYKNLNE----QIADSIAPLEIFPQILDAKT 57
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQ 133
ID+GSG GFP I ++ L E +L E KK++FL YV + +V +C+I+
Sbjct: 58 AIDVGSGAGFPAIFLAMILRECEW---HLFEPSPKKSAFLSYVKAELNLTNVRVKSCKIE 114
Query: 134 EAPQMITTCDVISARALADLDTLLEYS 160
+ +I++RAL LL
Sbjct: 115 DGEPFAAQ--LITSRALMKTKDLLGIC 139
>gi|239906964|ref|YP_002953705.1| methyltransferase GidB [Desulfovibrio magneticus RS-1]
gi|239796830|dbj|BAH75819.1| methyltransferase GidB [Desulfovibrio magneticus RS-1]
Length = 219
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 20/159 (12%)
Query: 23 RETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS--------- 73
E EKL + L +W ++NLV S + + DS V P
Sbjct: 14 PEQAEKLAGYLTLLTRWRGRVNLVGPSDWREILETLIADSWHVADFLSGPGAAFLPPAGE 73
Query: 74 --IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+ +D G+G G PG+ + G +L+E++ K+A FL + G A
Sbjct: 74 SVVSLDFGAGAGLPGVPL---RAFWNRGDYHLLEARQKRAVFLGECAARLGFAGLFAAEG 130
Query: 131 RIQE-----APQMITTCDVISARALADLDTLLEYSFPWL 164
R++ + +RA A L +
Sbjct: 131 RVEATVPPIVAAHPGAFILCLSRAFAPWPQFLAICRELV 169
>gi|323167067|gb|EFZ52797.1| methyltransferase gidB domain protein [Shigella sonnei 53G]
Length = 89
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+K NL S + +RH+ DS+ V +ID+G+G G PGI SI
Sbjct: 1 NKAYNLTSVRDPNEMLVRHILDSIVVAPYL-QGERFIDVGTGPGLPGIPLSIVRPEAH-- 57
Query: 100 LVNLIESKNKKASFLRYVVQKTA 122
L++S K+ FLR V
Sbjct: 58 -FTLLDSLGKRVRFLRQVHMSLN 79
>gi|262341120|ref|YP_003283975.1| glucose-inhibited division protein B [Blattabacterium sp.
(Blattella germanica) str. Bge]
gi|262272457|gb|ACY40365.1| glucose-inhibited division protein B [Blattabacterium sp.
(Blattella germanica) str. Bge]
Length = 206
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWID 77
++ + L KL L+ W+ +NL+S T DF +H+ L + ++ + S +D
Sbjct: 10 DLLNQQLYKLSSLKNLYAYWNTHVNLISRKTFYDFDQQHILFCLGIAKVFSFFPGSCVMD 69
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
LG+GGGFPGI SI E L++S KK + ++ + R ++
Sbjct: 70 LGTGGGFPGIPLSIVFPHTE---FILVDSIRKKIKIIEKIIYDLHLKNAHPICIRAEKLE 126
Query: 137 QMITTCDVISARALADLDTLLEY 159
D + RA+ +D + +
Sbjct: 127 N---KFDFVVTRAVTKIDIIQNW 146
>gi|283954548|ref|ZP_06372067.1| hypothetical protein C414_000230048 [Campylobacter jejuni subsp.
jejuni 414]
gi|283793952|gb|EFC32702.1| hypothetical protein C414_000230048 [Campylobacter jejuni subsp.
jejuni 414]
Length = 188
Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--P 72
L Y++ ++ +K++ + L K+++ NL +++ ++ DS+++ + +
Sbjct: 8 FLQNYDL-KDFEKKVKIYKELLQKFNRIHNLTHLKNIDE----NILDSVKILNFYDFSKA 62
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFACR 131
D+GSG GFP I + L +L E KKA+FLR + ++ ++ +
Sbjct: 63 KNIADIGSGAGFPAIFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELLNLHIYKEK 118
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYS 160
+QE D+I++RAL D+ LLE
Sbjct: 119 VQECKNTF-KADIITSRALMDIKPLLEIC 146
>gi|213615948|ref|ZP_03371774.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 144
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ID+G+G G PGI +I L L++S K+ FLR V +
Sbjct: 2 QGQRFIDVGTGPGLPGIPLAIVLPDAH---FTLLDSLGKRVRFLRQVQHELKLENITPVQ 58
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
EA D + +RA A L+ ++ +
Sbjct: 59 SRVEAYPSEPPFDGVISRAFASLNDMVSWCHHL 91
>gi|255521620|ref|ZP_05388857.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL
J1-175]
Length = 82
Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ + +S L++ ++ + ++W++K+NL + + ++ +++H DS+
Sbjct: 2 NPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISA 61
Query: 66 FQLHPYPS--IWIDLGSGGGF 84
+ D+G+G GF
Sbjct: 62 AFYVDFTKFDTICDVGAGAGF 82
>gi|148377452|ref|YP_001256328.1| methyltransferase GidB (glucose inhibiteddivision protein B)
[Mycoplasma agalactiae PG2]
gi|148291498|emb|CAL58884.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma agalactiae PG2]
Length = 231
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---- 67
+YLLN Y+ + + L + + + +K +N+ +++ + + + S+ VF+
Sbjct: 6 KDYLLNKYS---KQIPLLYKYAQMIYEQNKVMNICGFDNIDEIFNQGILGSILVFENAIS 62
Query: 68 ---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+G+G GFP + I L + + +IES K+ +FL + +
Sbjct: 63 EYNFDFKGKKILDIGAGAGFPSVPLLIALDN--EFELVIIESIAKRCAFLETIKAEFKLN 120
Query: 125 GKVFACRIQEAPQMITTCDVISARALAD 152
+ R + + D + ARAL
Sbjct: 121 LTIINDRAENVNSYNSYFDYVCARALGS 148
>gi|224417923|ref|ZP_03655929.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|253827262|ref|ZP_04870147.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|313141464|ref|ZP_07803657.1| glucose inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|253510668|gb|EES89327.1| glucose-inhibited division protein B [Helicobacter canadensis MIT
98-5491]
gi|313130495|gb|EFR48112.1| glucose inhibited division protein B [Helicobacter canadensis MIT
98-5491]
Length = 190
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSIWI 76
++ + + LE + L L+W+ +L + ++ + ++++DSL + +
Sbjct: 5 LTTQANQALETYAKLLLEWNGIHSLSGARDLQSVY-KNIQDSLYPLEFLGEVLRNKTKLF 63
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA 135
D+GSG GFP + I L G V L E KKA+FL+ + + + + R++E
Sbjct: 64 DVGSGNGFPAVALGIAL----GIEVVLCEPNAKKAAFLQNLKSQLGLKNFMILRQRVEEV 119
Query: 136 PQMITTCDVISARALADLDTLLE 158
++ D+I++RA ++ L+
Sbjct: 120 -KLDKKPDLITSRATFSVEDFLK 141
>gi|57505846|ref|ZP_00371771.1| methyltransferase GidB [Campylobacter upsaliensis RM3195]
gi|57015876|gb|EAL52665.1| methyltransferase GidB [Campylobacter upsaliensis RM3195]
Length = 191
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGG 83
L+++E + L K+++ NL +++ +++DS+ + D+GSG G
Sbjct: 13 LQRVEIYKNLLKKFNQIHNLTQLKNIDE----NIQDSIEILNFIDLTKAQNIADIGSGAG 68
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FP I S L L E KKA+FLR V + + + + D
Sbjct: 69 FPAIFLSFLL----DSRFYLFEPNAKKAAFLRSVKIECELKNLTIFKEKVQNHKTEFKAD 124
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
I++RAL L++ +L +
Sbjct: 125 FITSRALMRAKDLIQICR-FLSDE 147
>gi|268679017|ref|YP_003303448.1| methyltransferase GidB [Sulfurospirillum deleyianum DSM 6946]
gi|268617048|gb|ACZ11413.1| methyltransferase GidB [Sulfurospirillum deleyianum DSM 6946]
Length = 189
Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP--S 73
+ +Y + + E F L L++++ N+ + T E +++EDS+ Q
Sbjct: 1 MASYTLPAHFWDAAEQFATLLLQYNQTHNISGAKTKEAVM-KNIEDSIYPLQFLHVTTMK 59
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRI 132
ID+G+G GFPG++ ++ L + L E KK++FL V R+
Sbjct: 60 RGIDVGTGAGFPGLLLALALPHMH---FTLFEPIAKKSAFLHLAKSALELYNVDVCTNRV 116
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++AP D+IS+RA+ + L++ ++
Sbjct: 117 EKAPSF--EADLISSRAVTNTKVLIKLCHNFIAP 148
>gi|242309357|ref|ZP_04808512.1| glucose inhibited division protein [Helicobacter pullorum MIT
98-5489]
gi|239523928|gb|EEQ63794.1| glucose inhibited division protein [Helicobacter pullorum MIT
98-5489]
Length = 161
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----YPSIW 75
N+ E +KLE + + L+W+K +L + ++ + +++EDSL ++
Sbjct: 2 NLGVEISKKLEDYAIMLLEWNKIHSLSGAKSL-EMIQKNIEDSLYPLEIESLKLRDKKFL 60
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE 134
D+GSG GFP I I L G V L E KKA+FL+ V + V ++++
Sbjct: 61 FDVGSGNGFPAIPLGIVL----GSKVILCEPNAKKAAFLQNVKVELGLENFCVMRQKVEQ 116
Query: 135 APQMITTCDVISARA 149
M D+I++RA
Sbjct: 117 I-TMEDKPDIITSRA 130
>gi|283850758|ref|ZP_06368045.1| glucose inhibited division protein [Desulfovibrio sp. FW1012B]
gi|283574001|gb|EFC21974.1| glucose inhibited division protein [Desulfovibrio sp. FW1012B]
Length = 232
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 67/180 (37%), Gaps = 22/180 (12%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR 64
D+ ++ RA L +++ E + + L ++ K+NLV + E V DS
Sbjct: 9 DARAVTRAAAGLGR-HLTPEQAGTISGYLGLLARFRSKVNLVGPADWETVLATLVADSWH 67
Query: 65 VFQLHPYPS------------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
V P+ + +D G+G G PGI + G L+E++ K+A
Sbjct: 68 VADFLSGPAGAAVLPPAGRPVLGLDFGAGAGLPGIPLRAFF---DRGEYVLLEAREKRAF 124
Query: 113 FLRYVVQKTAARGKVFA-CRIQE-----APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
FL V + G A R+++ + + +RA A L +
Sbjct: 125 FLAEAVARLGLSGLSVAEGRVEDTVPGIVARHPDAFVLCVSRAFAPWPQFLALCRRIVRP 184
>gi|302341711|ref|YP_003806240.1| glucose inhibited division protein [Desulfarculus baarsii DSM 2075]
gi|301638324|gb|ADK83646.1| glucose inhibited division protein [Desulfarculus baarsii DSM 2075]
Length = 210
Score = 100 bits (251), Expect = 4e-20, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
A L + + + + L+W++ I LV + + W+ D L + L
Sbjct: 15 AGQRLAGGPLPADFWPQCQTLLEELLRWNQSIRLVGHRAMGEAWLNLALDGLAMVPLL-G 73
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FA 129
P +D+G+G GFPG++ ++ + V +I+ + KK SF ++ + +V
Sbjct: 74 PGRLLDIGAGAGFPGLVLALA---LPALTVTMIDGRAKKVSFQKHAARLLGLGSRVAPVV 130
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
R E + D +S RA+ D+ L + P+
Sbjct: 131 GRAGEGALAGQSFDFVSLRAVTDVAGSLALARPFCRP 167
>gi|291320116|ref|YP_003515374.1| methyltransferase GidB [Mycoplasma agalactiae]
gi|290752445|emb|CBH40416.1| Methyltransferase GidB (Glucose inhibiteddivision protein B)
[Mycoplasma agalactiae]
Length = 230
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---- 67
YLLN Y+ + + L + + + +K +N+ ++++ + + + S+ VF+
Sbjct: 5 KEYLLNKYS---KQIPLLYKYAQMIYEQNKVMNICGFDSIDEIFNQGILGSILVFENAIS 61
Query: 68 ---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+D+G+G GFP + I L + + +IES K+ +FL + +
Sbjct: 62 EYNFDFKGKKILDIGAGAGFPSVPLLIALDN--EFELVIIESIAKRCAFLETIKTEFKLN 119
Query: 125 GKVFACRIQEAPQMITTCDVISARALAD 152
+ R + + D + ARAL
Sbjct: 120 LTIINDRAENINSYNSYFDYVCARALGS 147
>gi|303248043|ref|ZP_07334309.1| glucose inhibited division protein [Desulfovibrio fructosovorans
JJ]
gi|302490600|gb|EFL50505.1| glucose inhibited division protein [Desulfovibrio fructosovorans
JJ]
Length = 232
Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 21/164 (12%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--PYPSIW--- 75
++ + L + L ++ +KINLV V DS + P
Sbjct: 24 LAPDQAALLAGYLQLLTRFRRKINLVGPQDWPTMLETLVADSWHLADFLAGPEAKRVLPP 83
Query: 76 -------IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D G+G G PGI G L+ES+ K+ FL + G
Sbjct: 84 GDALVLGLDFGAGAGLPGIGLRAFF---NRGPYYLLESRQKRCVFLAEATARLHLSGVHV 140
Query: 129 A-CRIQE-----APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
A R++ + +RA A L + +
Sbjct: 141 AEGRVERTVPDILAGHPGAFVLCLSRAFAPWPRFLTLCRELVRE 184
>gi|320537497|ref|ZP_08037441.1| 16S rRNA methyltransferase GidB [Treponema phagedenis F0421]
gi|320145638|gb|EFW37310.1| 16S rRNA methyltransferase GidB [Treponema phagedenis F0421]
Length = 228
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----------PYPSIW 75
+E L + ++ NLV + ++ I H+ DSL +++ +
Sbjct: 27 VELLTKYIRELQLFNSAFNLVKVDSEKELVINHILDSLAPWKIFADRFDAAKNTDAVYRF 86
Query: 76 IDLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
D GSG GFPGI + S LIE K+A+FL V V C I+
Sbjct: 87 ADAGSGSGFPGIPLACLFLSKNPAVQFTLIERMQKRAAFLENVCAVLNLTNVSVLQCPIE 146
Query: 134 EAPQMITTCDVISARALADLDT 155
++P+ D+++ RA LD
Sbjct: 147 QSPEH--EYDIVAFRAFRPLDK 166
>gi|283956395|ref|ZP_06373875.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 1336]
gi|283792115|gb|EFC30904.1| methyltransferase GidB [Campylobacter jejuni subsp. jejuni 1336]
Length = 188
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
I + L Y++ + EK++ + L K+++ NL +++ ++ DS+++
Sbjct: 1 MIFKDYDFLQNYDL-KNFEEKVKIYKELLSKFNRIHNLTHLKNIDE----NIFDSIKILD 55
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ + D+GSG GFP + + L +L E KKA+FLR + +
Sbjct: 56 FYDFSKAKNIADIGSGAGFPAVFLAFLL----QSNFHLFEPNPKKAAFLRTLKIECELSN 111
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
++ ++QE D+I++R+L D+ LLE
Sbjct: 112 LHIYKEKVQECKNTF-KADIITSRSLMDVKPLLEIC 146
>gi|162454334|ref|YP_001616701.1| putative glucose-inhibited division protein [Sorangium cellulosum
'So ce 56']
gi|189040719|sp|A9GCQ1|RSMG_SORC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|161164916|emb|CAN96221.1| putative glucose-inhibited division protein [Sorangium cellulosum
'So ce 56']
Length = 239
Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV---EDSLRVFQLHPYPSI 74
+ + KL + L ++ +NL S + + W +HV L + + +
Sbjct: 31 GVTLDAAVIAKLGDYLARLLAMNELMNLTSITDPVEVWEKHVLDSLTLLPLLEELSAGAR 90
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
D+GSGGG PG+ +I ++ V L+E+ KKASFL V V A R +
Sbjct: 91 LADIGSGGGLPGLPLAIARPDLK---VTLVEATQKKASFLVAVAAGLGLTNVSVRAERAE 147
Query: 134 EA--PQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ + D ++ARA+ L L+ + P++
Sbjct: 148 QLGKGDLCGAFDAVTARAVGRLVMLIPLTVPFVRP 182
>gi|302336547|ref|YP_003801754.1| glucose inhibited division protein [Olsenella uli DSM 7084]
gi|301320387|gb|ADK68874.1| glucose inhibited division protein [Olsenella uli DSM 7084]
Length = 253
Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 38/167 (22%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWI------------------RHVEDS 62
+S L L ++++NL T+E I +H
Sbjct: 24 LSDAQRMTLLEHLMLVFDKNREMNLTRIDTMEHGLILHILDSLLLLPCLDHLGYKH---- 79
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ ++DLG+G GFPGI +I G LI+S KKA + + +
Sbjct: 80 ---------ENYFVDLGTGAGFPGIPLAIAT----GMSGLLIDSVGKKAHAVEGFIHTLS 126
Query: 123 ARGKVFAC--RIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
G++ A R ++ A + D +SARA+A+L L+EY+ P L +
Sbjct: 127 LSGQLSAKGIRAEDLARRKAGAFDYVSARAVAELPVLVEYASPLLRK 173
>gi|42523138|ref|NP_968518.1| methyltransferase gidB [Bdellovibrio bacteriovorus HD100]
gi|39575343|emb|CAE79511.1| Methyltransferase gidB [Bdellovibrio bacteriovorus HD100]
Length = 288
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 5 DSNSILRANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++N L + + +++ S ++L +FY L + +K N + D I+H DS+
Sbjct: 48 EANDRLADVFRNHGFDLVSHSQRQQLAHFYRLLMLNQEKENFTRLLKLRDVAIKHFIDSI 107
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G GFPGI I + + L E ++ FL++V +
Sbjct: 108 IIMKYTDLQFPLLDVGTGPGFPGIPLKIMYPDQQ---ILLGEGVQRRVEFLKHVRSEMNL 164
Query: 124 RGKVFACRIQEAPQMITTCDVISARAL 150
+ R + I+ RA+
Sbjct: 165 KNLDILGRNINKHCVYPVRGAIT-RAV 190
>gi|124516566|gb|EAY58074.1| putative glucose-inhibited division protein B [Leptospirillum
rubarum]
Length = 210
Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+ + N ++ ET+ +L + + W++ I L D V + L Q
Sbjct: 7 ESQVFNRLHLGSETINRLSEYVEILASWNQHIRLSGYREKTDIRQHLVWEPLLAAQYFGL 66
Query: 72 PSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
S D GSG G PGII SI + V+L+E K KK SFL YV+ + F
Sbjct: 67 ASSLCSIVDFGSGNGSPGIIFSILYPHLH---VSLVERKQKKLSFLSYVISRLKLENATF 123
Query: 129 --ACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R A Q ++C I +A++ LE S P
Sbjct: 124 YDNIRTALAAQKTSSCTEIWMKAISMQSLFLELSRP 159
>gi|13508297|ref|NP_110247.1| methyltransferase GidB [Mycoplasma pneumoniae M129]
gi|2498409|sp|P75220|RSMG_MYCPN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|1673955|gb|AAB95932.1| methyltransferase GidB [Mycoplasma pneumoniae M129]
gi|301633434|gb|ADK86988.1| 16S rRNA methyltransferase GidB [Mycoplasma pneumoniae FH]
Length = 191
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP---YPSIWIDLGSGGGF 84
KL+ + L ++ NL T + + V++ + +F + DLGSG G
Sbjct: 5 KLKQYVQLVQTANQNFNLTGLKTEGEIYEHLVQEIIELFNEYDSYFDHKKVADLGSGNGC 64
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCD 143
PG+I + I+ ++LI+SK+KK +FL+ V+Q RI+ D
Sbjct: 65 PGVILKLLFPQIK--TLDLIDSKHKKVNFLKEVIQTLELNNTQALCARIE---NHTEQYD 119
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
+ +R L + + ++ L
Sbjct: 120 TLCSRGLGSIIEVNAFALKLLKP 142
>gi|222824126|ref|YP_002575700.1| glucose inhibited division protein B [Campylobacter lari RM2100]
gi|222539348|gb|ACM64449.1| glucose inhibited division protein B [Campylobacter lari RM2100]
Length = 197
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YP 72
L + + +++ + L K++ NL ++ ++ DS+++
Sbjct: 10 FLKDFANKDDFYQRIILYKELLKKFNAVHNLTHLEDIDG----NIIDSIKILDYCDLTDK 65
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+D+GSG GFP I + +E L E KKASFLR + + + +
Sbjct: 66 KKIVDIGSGAGFPAIFLACI---LENSSFFLFEPSVKKASFLRVIKTELNLININIIKEK 122
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYS 160
+Q P D+I++RAL D+ L+E S
Sbjct: 123 LQNHPSF--KVDLITSRALMDIKPLIEIS 149
>gi|307128691|ref|YP_003880721.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
CARI]
gi|306483153|gb|ADM90023.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
CARI]
Length = 208
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGGGFPG 86
Y L ++ KIN++S ++++ F+ H SL ++++ + SI +D+G+GGGFPG
Sbjct: 23 FFKLYKLHKFFNLKINIISKNSLKLFYESHFLHSLSIYKIFYFFNKSIILDVGTGGGFPG 82
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQMITTCDVI 145
I +I LI+S KK + +++ K + C RI+ C+ +
Sbjct: 83 IPLAIMF---NKTKFILIDSIKKKIKLINFIINKLHLKNVYIQCTRIE---NFNKKCNFL 136
Query: 146 SARALADLDTLLEY 159
RA+ L+
Sbjct: 137 LGRAVTKFTNFLKL 150
>gi|328946990|ref|YP_004364327.1| ribosomal RNA small subunit methyltransferase G [Treponema
succinifaciens DSM 2489]
gi|328447314|gb|AEB13030.1| Ribosomal RNA small subunit methyltransferase G [Treponema
succinifaciens DSM 2489]
Length = 220
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 16/157 (10%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
N L S+ + ++E + L+++K NL+ + + ++ + H+ DSL
Sbjct: 1 MNEKLNEGLKKLGLEFSQNQISRIETYISCVLEFNKTYNLMKADSTDELTVNHILDSLAA 60
Query: 66 FQLHP------------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
D+GSGGG PGI ++ L+E K+ F
Sbjct: 61 APSIASFIQKIQEKKNIASLQIADIGSGGGCPGIPLAVAFPEQN---FMLVERMEKRCGF 117
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
L V K C IQ + D+ RA
Sbjct: 118 LESAVCKMNLSNVKVNC-IQADLIKPESFDIEVFRAF 153
>gi|330723493|gb|AEC45863.1| 16S rRNA methyltransferase GidB [Mycoplasma hyorhinis MCLD]
Length = 204
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 21 VSRETL-EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ----LHPYPSIW 75
V+ E + +LE F L + +K +NL + + W + +S+ + L
Sbjct: 12 VNNEQIFSQLEKFVSLIEQKNKVMNLTGFT-QDQLWKEGIYESIITLKQSIYLKNKKIAL 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G+G GFP I I S I+ + ++E K+ FL+ V Q+ ++ A
Sbjct: 71 LDVGAGAGFPSIPFFIINSDIK---LVIVEKLKKRCDFLQLVKQELNLDFEIIND---LA 124
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
+ D I+AR + +LD L + +
Sbjct: 125 SNLQAKFDYITARVVGNLDFLFKIT 149
>gi|15639931|ref|NP_219382.1| glucose-inhibited division protein B (gidB) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189026169|ref|YP_001933941.1| glucose-inhibited division protein B [Treponema pallidum subsp.
pallidum SS14]
gi|4033391|sp|O66106|RSMG_TREPA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|238689352|sp|B2S4I3|RSMG_TREPS RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|2988418|gb|AAC08056.1| gidB homolog [Treponema pallidum]
gi|3323268|gb|AAC65903.1| glucose-inhibited division protein B (gidB) [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189018744|gb|ACD71362.1| glucose-inhibited division protein B [Treponema pallidum subsp.
pallidum SS14]
gi|291060301|gb|ADD73036.1| 16S rRNA methyltransferase GidB [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 222
Score = 99.4 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ + + ++ + +LV + E+ H+ DSL + D+GSG G PGI
Sbjct: 30 LKQYLEELILFNTRAHLVHVTHTEELITHHLLDSLSAWPHFTNARAIADIGSGAGLPGIP 89
Query: 89 TSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVIS 146
+ L+ + LIE + K+ +FL + A ++ + T D I+
Sbjct: 90 LACALALYAPETELTLIERREKRIAFLENACARLALPHLRIVHADAHDLTPY--TYDAIT 147
Query: 147 ARALADLD 154
RAL L+
Sbjct: 148 FRALCPLN 155
>gi|42528013|ref|NP_973111.1| glucose-inhibited division protein B [Treponema denticola ATCC
35405]
gi|55976458|sp|Q73JU8|RSMG_TREDE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|41819058|gb|AAS13030.1| glucose-inhibited division protein B [Treponema denticola ATCC
35405]
Length = 254
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 69/196 (35%), Gaps = 43/196 (21%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEY----FYFLFLKWSKKINLVSSSTVEDFWIRHVED 61
SN IL L ++ + KL + ++ NLV E+ + H+ D
Sbjct: 13 SNGILLKG--LKELGINEKAHNKLSKLLNIYMRELKMFNASFNLVKVKDDEELIVAHILD 70
Query: 62 SLRVFQLH---------------------------PYPSIWIDLGSGGGFPGIITSIQLS 94
SL ++ P D G+G GFPG+ +
Sbjct: 71 SLSAWRFFYNETKNTESKTSLNNAETKNTNEALLTSEPFYIADAGTGAGFPGVPLAALFI 130
Query: 95 SIEGGLVN--LIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
S+ V LIE K+ +FL + ++ ++APQ D+++ RA
Sbjct: 131 SLGNLDVKLSLIERMQKRCTFLENIKAVLQLNNTEIIESEAEKAPQ--NKFDIVTCRAFH 188
Query: 152 DLD-----TLLEYSFP 162
LD TLL + P
Sbjct: 189 TLDKHILQTLLNLAKP 204
>gi|284931679|gb|ADC31617.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str. F]
Length = 242
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---DFW-IRHVE--DSLRVFQLHPY 71
++ + +E + +F ++ NL T E + ++ + SL
Sbjct: 13 NLTLTDKQIEDIAFFLEEIYHSNQLFNLTGYKTKELIAEMLGVKTILLAQSLSYI-FSNQ 71
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
ID+G+G G PG+I I + V L++S KK +F+ V++K G
Sbjct: 72 SLNVIDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNFTGVFAILS 128
Query: 131 RIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
R+++ + D + ++A++ + L E L
Sbjct: 129 RVEDNFFLKKYHGCFDYVFSQAVSKIAVLNELGTQLLK 166
>gi|166989747|sp|Q4A6Q0|RSMG_MYCS5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|144574982|gb|AAZ43571.2| glucose inhibited division protein B [Mycoplasma synoviae 53]
Length = 225
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI---WIDLGSGGGFP 85
E + L + +K INL + E W + +SL +D+GSG GFP
Sbjct: 21 FEKYVSLIEEHNKNINLTGF-SGESLWEEGILNSLLYMNSSTKDKSEIKILDIGSGVGFP 79
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
I ++ E +++ E K+ FL V QK + ++ R +E Q DV
Sbjct: 80 AIPYALLR---ENNSIDIFEPIQKRVDFLNLVKQKLTLDKVNIYKQRAEEFSQ-KNIYDV 135
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
+ ARA+ + T+L +F + K
Sbjct: 136 VVARAVGSVKTMLMAAFHLVALK 158
>gi|315638028|ref|ZP_07893213.1| glucose inhibited division protein B [Campylobacter upsaliensis
JV21]
gi|315481876|gb|EFU72495.1| glucose inhibited division protein B [Campylobacter upsaliensis
JV21]
Length = 186
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP--YPSIWIDLGSGGG 83
L+++E + L K+++ NL +++ +++DS+ + D+GSG G
Sbjct: 13 LQRVEIYKNLLKKFNQIHNLTQLKNIDE----NIQDSIEILNFIDLTKAQNIADIGSGAG 68
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
FP I S L L E KK++FLR V + + + + D
Sbjct: 69 FPAIFLSFLL----DSRFYLFEPNAKKSAFLRSVKIECELKNLHIIKEKVQNHKAEFKAD 124
Query: 144 VISARALADLDTLLEYSFPWLYQK 167
I++RAL L++ +L +
Sbjct: 125 FITSRALMKAKDLIQICR-FLSDE 147
>gi|71894174|ref|YP_278282.1| glucose-inhibited division protein B [Mycoplasma synoviae 53]
Length = 207
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI---WIDLGSGGGFP 85
E + L + +K INL + E W + +SL +D+GSG GFP
Sbjct: 3 FEKYVSLIEEHNKNINLTGF-SGESLWEEGILNSLLYMNSSTKDKSEIKILDIGSGVGFP 61
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDV 144
I ++ E +++ E K+ FL V QK + ++ R +E Q DV
Sbjct: 62 AIPYALLR---ENNSIDIFEPIQKRVDFLNLVKQKLTLDKVNIYKQRAEEFSQ-KNIYDV 117
Query: 145 ISARALADLDTLLEYSFPWLYQK 167
+ ARA+ + T+L +F + K
Sbjct: 118 VVARAVGSVKTMLMAAFHLVALK 140
>gi|31544848|ref|NP_853426.1| ribosomal RNA small subunit methyltransferase G [Mycoplasma
gallisepticum str. R(low)]
gi|20177907|sp|Q9KX67|RSMG_MYCGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|7109685|gb|AAF36756.1| glucose inhibited division protein B [Mycoplasma gallisepticum]
gi|31541694|gb|AAP56994.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str.
R(low)]
gi|284930923|gb|ADC30862.1| ribosomal RNA small subunit methyltransferase G (glucose-inhibited
division protein B) [Mycoplasma gallisepticum str.
R(high)]
Length = 242
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---DFW-IRHVE--DSLRVFQLHPY 71
++ + +E + +F ++ NL T E + ++ + SL
Sbjct: 13 NLTLTDKQIEDIAFFLEEIYHSNQLFNLTGYKTKELIAEMLGVKTILLAQSLSYI-FSNQ 71
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
ID+G+G G PG+I I + V L++S KK +F+ V++K G
Sbjct: 72 SLNVIDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNFTGVFAILS 128
Query: 131 RIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
R+++ + D + ++A++ + L E L
Sbjct: 129 RVEDNFFLKKYHGYFDYVFSQAVSKIAVLNELGTQLLK 166
>gi|332296663|ref|YP_004438586.1| Ribosomal RNA small subunit methyltransferase G [Thermodesulfobium
narugense DSM 14796]
gi|332179766|gb|AEE15455.1| Ribosomal RNA small subunit methyltransferase G [Thermodesulfobium
narugense DSM 14796]
Length = 207
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSGG 82
L+++ + ++K+ +LVS ++VE+F+ +HV DSL + ++D+G+G
Sbjct: 28 LDEISLYSEKLFLYNKRHSLVSFNSVEEFFFKHVYDSLFPTVLCPDFFSTKEFLDIGTGA 87
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITT 141
G PG+I SI L L+E K K+ FL V+ + + VF R++ ++
Sbjct: 88 GIPGLILSICFPE---SLWILLEPKYKRVIFLEGVILELDIKNAIVFQERLENLKEIPER 144
Query: 142 CDVISARALADLDTL 156
+ +RA L +
Sbjct: 145 ---VISRATFPLKKM 156
>gi|307297770|ref|ZP_07577576.1| methyltransferase GidB [Thermotogales bacterium mesG1.Ag.4.2]
gi|306917030|gb|EFN47412.1| methyltransferase GidB [Thermotogales bacterium mesG1.Ag.4.2]
Length = 225
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 54/142 (38%), Gaps = 7/142 (4%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
K E L L NL S E H+ED++ F+ ID+GSGGG P
Sbjct: 13 FAKYEKLIELMLS--SPHNLSSIKEFERAMTVHIEDTIIPFEGSSLSGRCIDIGSGGGIP 70
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQE-APQMITTCD 143
G++ +I L+ES KK + + R +E A + T D
Sbjct: 71 GLVLAISFPKSNWT---LLESIAKKTREIERFARDLDLTNVAVKTARAEEFAKEAGETFD 127
Query: 144 VISARALADLDTLLEYSFPWLY 165
RA+ D LE + P +
Sbjct: 128 SAFLRAVGRCDISLELAAPLVK 149
>gi|325474767|gb|EGC77953.1| ribosomal RNA small subunit methyltransferase G [Treponema
denticola F0402]
Length = 249
Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 70/200 (35%), Gaps = 44/200 (22%)
Query: 5 DSNSILRANYL--------LNTYNVSRETLEKLEY----FYFLFLKWSKKINLVSSSTVE 52
D++ +L + L L ++ + KL + ++ NLV E
Sbjct: 2 DTDKLLSKDLLSDGILLKGLKELGINEKAHNKLSKLLNIYMRELKMFNASFNLVKVKDDE 61
Query: 53 DFWIRHVEDSLRVFQLH----------------------PYPSIWIDLGSGGGFPGIITS 90
+ + HV DSL + P D G+G G PGI +
Sbjct: 62 ELIVSHVLDSLSAWHFFYNETKNTESNTTSKNDNDDLLRKEPFYIADAGTGAGLPGIPLA 121
Query: 91 IQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
S+ V LIE K+ +FL + ++ ++APQ D+++
Sbjct: 122 ALFISLGNLDVKLSLIERMQKRCTFLENIKAVLQLNNTEIIESEAEKAPQ--NKFDIVTC 179
Query: 148 RALADLD-----TLLEYSFP 162
RA LD TLL + P
Sbjct: 180 RAFRTLDKHILNTLLNLAKP 199
>gi|51535158|dbj|BAD37870.1| methyltransferase-related-like [Oryza sativa Japonica Group]
gi|51535822|dbj|BAD37907.1| methyltransferase-related-like [Oryza sativa Japonica Group]
Length = 111
Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHP-------YPSIWIDLGSGGGFPGIITSIQLSS 95
+NL + + + RHV DSL V +D+GSG G PG+I ++ S
Sbjct: 1 MNLTAVTDEGEVMTRHVADSLAVLPPLERAYRGDLGGMRLVDVGSGAGLPGLILAVARPS 60
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQE 134
+ L+ES K+ FL + V+ V R ++
Sbjct: 61 WK---FTLLESMQKRCLFLEHAVEVMGLSNVDVVCDRAED 97
>gi|193806325|sp|Q6MMJ3|RSMG2_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 2;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 2; Short=16S rRNA m7G
methyltransferase 2
Length = 255
Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 5 DSNSILRANYLLNTYNV-SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
++N L + + +++ S ++L +FY L + +K N + D I+H DS+
Sbjct: 15 EANDRLADVFRNHGFDLVSHSQRQQLAHFYRLLMLNQEKENFTRLLKLRDVAIKHFIDSI 74
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G GFPGI I + + L E ++ FL++V +
Sbjct: 75 IIMKYTDLQFPLLDVGTGPGFPGIPLKIMYPDQQ---ILLGEGVQRRVEFLKHVRSEMNL 131
Query: 124 RGKVFACRIQEAPQMITTCDVISARAL 150
+ R + I+ RA+
Sbjct: 132 KNLDILGRNINKHCVYPVRGAIT-RAV 157
>gi|28212474|gb|AAO37613.1| glucose inhibited division protein B [Mycoplasma gallisepticum]
Length = 242
Score = 98.6 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---DFW-IRHVE--DSLRVFQLHPY 71
++ + +E + +F ++ NL T E + ++ + SL
Sbjct: 13 NLTLTDKQIEDIAFFLEEIYHSNQLFNLTGYKTKELIAEMLGVKTILLAQSLSYI-FSNQ 71
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
ID+G+G G PG+I I + V L++S KK +F+ V++K G
Sbjct: 72 SLNVIDIGTGAGIPGLIIKIIYPQLN---VYLVDSNAKKITFINEVIKKLNFTGVFAILS 128
Query: 131 RIQE---APQMITTCDVISARALADLDTLLEYSFPWLY 165
R+++ + D + ++A++ + L E L
Sbjct: 129 RVEDNFFLKKYHGYFDYVFSQAVSKIAVLNELGTQLLK 166
>gi|23004582|ref|ZP_00047839.1| COG0357: Predicted S-adenosylmethionine-dependent methyltransferase
involved in bacterial cell division [Magnetospirillum
magnetotacticum MS-1]
Length = 143
Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
E F + L+ V W RH+ +S V P + D+GSG G PG++
Sbjct: 30 EKFAERLRNEGELRGLIGPREVPRIWDRHILNSAAVVPFLPRTGLIADVGSGAGLPGVVI 89
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAP 136
+ V LIE ++ ++L + + + +V R +E
Sbjct: 90 AAMRPE---ATVYLIEPMERRCAWLTEIAEDLSLPNIEVKRGRAEEYH 134
>gi|71894003|ref|YP_279449.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae J]
gi|123645392|sp|Q4A933|RSMG_MYCHJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71852130|gb|AAZ44738.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae J]
Length = 202
Score = 97.9 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--------PYPSIWID 77
E LE + L +K NL + + + W + +S+ +D
Sbjct: 15 FENLEKYVNLIEFSNKNFNLTAF-SGDILWKEGIFESIFTMNFIVGLVNNKENKKLKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFP I I IE + + ES K+ FL+ V +K + + +QE
Sbjct: 74 IGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDVSEKLDLKFNLICKPVQEI-- 128
Query: 138 MITTCDVISARALADLDTL 156
D+I+ARA+A+L+ L
Sbjct: 129 NPQKFDIITARAVANLEKL 147
>gi|154174377|ref|YP_001408663.1| methyltransferase GidB [Campylobacter curvus 525.92]
gi|193806437|sp|A7GZM1|RSMG_CAMC5 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112802117|gb|EAT99461.1| methyltransferase GidB [Campylobacter curvus 525.92]
Length = 186
Score = 97.1 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 11/144 (7%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWID 77
+ + E+ F + K+++ +L + ++ + DS+ + + P ID
Sbjct: 2 IEIPSDFSEQTAKFTQILAKFNRVHSLTNYKNFDE----QISDSISPLKWLKFYPETAID 57
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+GSG GFP I ++ L L E KK+SFL YV + + V +C+I+
Sbjct: 58 VGSGAGFPAIFLAMILKDCRW---WLFEPNAKKSSFLSYVKAELNLKNVSVKSCKIEACE 114
Query: 137 QMITTCDVISARALADLDTLLEYS 160
+ +I++RAL LL+
Sbjct: 115 PFVAQ--LITSRALMKTKELLKIC 136
>gi|332298997|ref|YP_004440919.1| Ribosomal RNA small subunit methyltransferase G [Treponema
brennaborense DSM 12168]
gi|332182100|gb|AEE17788.1| Ribosomal RNA small subunit methyltransferase G [Treponema
brennaborense DSM 12168]
Length = 224
Score = 97.1 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 17/140 (12%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----------PSIWI 76
KL+ + ++ +L + T +D ++HV DSL ++
Sbjct: 26 KLDAYVRELEMFNAAYDLCGADTRDDIVVKHVLDSLSAANRVKKFADAVQAEAGRSALIA 85
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEA 135
D+GSGGG PGI + + G LIE +K+ +FL + V +
Sbjct: 86 DVGSGGGLPGIPLAAA---LSGHRFVLIERMSKRCAFLENCIAILGLTNVSVENTEAERV 142
Query: 136 PQMITTCDVISARALADLDT 155
T D+ RA LD
Sbjct: 143 --FPETADIAVFRAFRPLDK 160
>gi|206603438|gb|EDZ39918.1| Putative glucose-inhibited division protein B [Leptospirillum sp.
Group II '5-way CG']
Length = 210
Score = 97.1 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 16/160 (10%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
+++ N ++ ET+ +L F + W++ I L D V + L
Sbjct: 7 ESHVFNQFHFDSETINRLSEFVEVLASWNQHIRLSGYREKADIRQHLVTEPLLAAHYFGL 66
Query: 72 PSIWI---DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
S D GSG G PGII SI + ++L+E K KK SFL YV+ + + F
Sbjct: 67 ASSLCSIVDFGSGNGSPGIIFSILYPHLR---ISLVERKQKKLSFLSYVISRLNLQNTTF 123
Query: 129 ------ACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
A Q+AP I +A++ E S P
Sbjct: 124 YDNIRSALTAQQAPSSTE----IWMKAVSMQSLFSELSRP 159
>gi|237752962|ref|ZP_04583442.1| methyltransferase GidB [Helicobacter winghamensis ATCC BAA-430]
gi|229375229|gb|EEO25320.1| methyltransferase GidB [Helicobacter winghamensis ATCC BAA-430]
Length = 187
Score = 97.1 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDL 78
+S E LE + + L W+ +L + +D +++E+SL +D+
Sbjct: 3 LSTAQQELLENYTQMLLSWNAIHSLSGAKDTKDI-QKNIENSLYPLSKIDLGHKHLLLDI 61
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
GSG GFP I I L L E KKA+FL+ + + + E+ ++
Sbjct: 62 GSGNGFPAIPLHIAL----RIPTILCEPNAKKAAFLQNIKATLKLQNLSIQRKKIESLEL 117
Query: 139 ITTCDVISARALADLDTLLEYS 160
D+I++RA LLE
Sbjct: 118 KNLPDLITSRATFATKVLLEKC 139
>gi|42521935|ref|NP_967315.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
gi|81618560|sp|Q6MQY9|RSMG1_BDEBA RecName: Full=Ribosomal RNA small subunit methyltransferase G 1;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase 1; Short=16S rRNA m7G
methyltransferase 1
gi|39574465|emb|CAE77969.1| glucose inhibited division protein B [Bdellovibrio bacteriovorus
HD100]
Length = 205
Score = 97.1 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSS-TVEDFWIRHVEDSLRVFQLHPYP-SIW 75
+ L +L+ + L ++++NL+S T E+ HV D L + P +
Sbjct: 14 QLGFNEAALPQLKAYLDLLWSSNEELNLISRKMTYEELIDNHVIDCLLPIKDFPKDVKVA 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D GSGGG PG+I +IQ ++E +L E K FL V A ++ E
Sbjct: 74 ADFGSGGGLPGVIYAIQFPNVE---YHLFEKSKLKQDFLNRCV-SIAPNLRIH----GEI 125
Query: 136 PQMITTCDVISARALADLDTLLEYS 160
P + +V+++RA +D +LE+S
Sbjct: 126 PPKLEKIEVVTSRAFKPVDVILEFS 150
>gi|54020291|ref|YP_116184.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae 232]
gi|81603603|sp|Q5ZZN1|RSMG_MYCH2 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|53987464|gb|AAV27665.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae 232]
Length = 202
Score = 96.7 bits (240), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--------PYPSIWID 77
E LE + L +K NL + + + W + +S+ +D
Sbjct: 15 FENLEKYVNLIEFSNKNFNLTAF-SGDILWKEGIFESIFTMNFIVGLVNNKENKKLKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFP I I IE + + ES K+ FL+ + +K + + +QE
Sbjct: 74 IGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDISEKLDLKFNLICKPVQEI-- 128
Query: 138 MITTCDVISARALADLDTL 156
D+I+ARA+A+L+ L
Sbjct: 129 NPQKFDIITARAVANLEKL 147
>gi|157163908|ref|YP_001466523.1| methyltransferase GidB (glucose-inhibited divisionprotein B)
[Campylobacter concisus 13826]
gi|193806436|sp|A7ZCL5|RSMG_CAMC1 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|112800649|gb|EAT97993.1| methyltransferase GidB [Campylobacter concisus 13826]
Length = 188
Score = 96.7 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDLGSGGGFP 85
EK++ + +F K++K +L + + + V DS++ ++ ID+GSG GFP
Sbjct: 13 EKVKAYAQIFTKFNKVHSLSNYKDISE----QVLDSIKPLEIFDLSAKTAIDVGSGAGFP 68
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDV 144
I ++ + + +L E KK+SFL Y + + +V + +I+ A + T D+
Sbjct: 69 AIFLALAMPQTKW---HLFEPIAKKSSFLSYAKIELGLQNLEVHSQKIELADKF--TADL 123
Query: 145 ISARALADLDTLLEYS 160
I++RAL+ L++
Sbjct: 124 ITSRALSKTKELIKIC 139
>gi|72080982|ref|YP_288040.1| 16S rRNA methyltransferase GidB [Mycoplasma hyopneumoniae 7448]
gi|123644618|sp|Q4A772|RSMG_MYCH7 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|71914106|gb|AAZ54017.1| glucose inhibited division protein B [Mycoplasma hyopneumoniae
7448]
Length = 202
Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH--------PYPSIWID 77
E LE + L +K NL + + + W + +S+ +D
Sbjct: 15 FENLEKYVNLIEFSNKNFNLTAF-SGDILWKEGIFESIFTMNFIVGLVNNKENKKLKILD 73
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ 137
+G+G GFP I I IE + + ES K+ FL+ + +K + + +QE
Sbjct: 74 IGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDISEKLDLKFNLICKPVQEID- 129
Query: 138 MITTCDVISARALADLDTL 156
D+I+ARA+A+L+ L
Sbjct: 130 -PQKFDIITARAVANLEKL 147
>gi|153806708|ref|ZP_01959376.1| hypothetical protein BACCAC_00979 [Bacteroides caccae ATCC 43185]
gi|149131385|gb|EDM22591.1| hypothetical protein BACCAC_00979 [Bacteroides caccae ATCC 43185]
Length = 139
Score = 95.9 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQE 134
+DLG+GGGFPGI +I + +L++S KK V + F R +E
Sbjct: 1 MDLGTGGGFPGIPLAILFPETK---FHLVDSIGKKVRVATEVANAIGLKNVTFRHARAEE 57
Query: 135 APQMITTCDVISARALADLDTLLE 158
Q+ D + +RA+ L L++
Sbjct: 58 EKQL---FDFVVSRAVMPLADLIK 78
>gi|88854494|ref|ZP_01129161.1| glucose-inhibited division protein B [marine actinobacterium
PHSC20C1]
gi|88816302|gb|EAR26157.1| glucose-inhibited division protein B [marine actinobacterium
PHSC20C1]
Length = 211
Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 4/143 (2%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ ++ + + +++ L+ V W RH+ + + V L P + D+GSG G
Sbjct: 20 DRIDLARQYTESLARRGEELGLIGPLEVSRLWTRHIVNCVLVAPLLK-PGLVGDIGSGAG 78
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
PG++ +I +E LIE ++ +L + +
Sbjct: 79 LPGLVLAIARPDVE---FVLIEPMERRVDWLTSESARLGLENVTIDRSRSQDAPYSEALS 135
Query: 144 VISARALADLDTLLEYSFPWLYQ 166
I+ARA+ L L+ + L
Sbjct: 136 QITARAVTALSKLIPATEHLLSP 158
>gi|134103812|ref|YP_001109473.1| putative glucose inhibited division protein B [Saccharopolyspora
erythraea NRRL 2338]
gi|133916435|emb|CAM06548.1| putative glucose inhibited division protein B [Saccharopolyspora
erythraea NRRL 2338]
Length = 155
Score = 94.8 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP--QMITT 141
PGI SI +E + L+E ++ ++L+ V+ + +V R +E P + +
Sbjct: 1 MPGIPLSIARPDLE---LTLLEPMARRVAWLQEVITELGLNAEVMRGRAEEGPVRERLAD 57
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV++ARA+A + L ++ P L +
Sbjct: 58 QDVVTARAVAPMARLAKWCLPLLRPE 83
>gi|12045241|ref|NP_073052.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|255660406|ref|ZP_05405815.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|1346132|sp|P47620|RSMG_MYCGE RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|3844968|gb|AAC71607.1| methyltransferase GidB [Mycoplasma genitalium G37]
gi|166078794|gb|ABY79412.1| methyltransferase GidB [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 192
Score = 94.8 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 7/142 (4%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY---PSIWIDLGSGGGFP 85
E + L + +K NL T E + V + L +F+ + DLGSG G P
Sbjct: 6 FEKYVDLVFEANKNFNLTGFKTKEAIYQNLVIEILTLFKGYEKFFIDKTVADLGSGNGSP 65
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
GII + I+ + LI+SK+KK SFL + ++ V C + DVI
Sbjct: 66 GIILKLLFQKIK--KLVLIDSKHKKISFLNKLTKQLNLEKTVAIC--ERIEVHKNHYDVI 121
Query: 146 SARALADLDTLLEYSFPWLYQK 167
+R L+ + + + +F L K
Sbjct: 122 CSRGLSTIIKVNDLAFSLLNSK 143
>gi|257458048|ref|ZP_05623207.1| 16S rRNA methyltransferase GidB [Treponema vincentii ATCC 35580]
gi|257444761|gb|EEV19845.1| 16S rRNA methyltransferase GidB [Treponema vincentii ATCC 35580]
Length = 231
Score = 94.4 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 11/139 (7%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---------PYPSIWI 76
+ L + ++ NL+ ++ I+H+ DSL ++
Sbjct: 26 QDMLSRYIRELETFNAVFNLIKVQNTQELIIKHILDSLAPWEFLAEWIDTHQAEGRCTIA 85
Query: 77 DLGSGGGFPGIITSIQLSSIEGG-LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
D+GSG G PGI + + LIE +K+ + L + +
Sbjct: 86 DIGSGAGLPGIPLACLFLLKDPSIEFTLIERMHKRCAVLENIQAMLELTNTAILE-SEVE 144
Query: 136 PQMITTCDVISARALADLD 154
D+ RA LD
Sbjct: 145 KASADYFDIAVFRAFRPLD 163
>gi|294786225|ref|ZP_06751479.1| 16S rRNA methyltransferase GidB [Parascardovia denticolens F0305]
gi|315225758|ref|ZP_07867546.1| glucose inhibited division protein B [Parascardovia denticolens DSM
10105]
gi|294485058|gb|EFG32692.1| 16S rRNA methyltransferase GidB [Parascardovia denticolens F0305]
gi|315119890|gb|EFT83022.1| glucose inhibited division protein B [Parascardovia denticolens DSM
10105]
Length = 327
Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 22/133 (16%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH------------------ 69
KL F+ K + L+ V+ W RH+ +S +
Sbjct: 21 KLTRFHAKLEKEGEPRGLIGPRDVDIIWERHILNSAALLPFVRTALDAIPSRLYLGEVDG 80
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
I D+GSGGGFPGI+ + L + LIE ++ +L+ VV++ +
Sbjct: 81 ENAPIVGDIGSGGGFPGIVLAALLPHVR---FFLIEPMERRCEWLQEVVEELDLNNATIV 137
Query: 129 ACRIQEAPQMITT 141
R +E ++
Sbjct: 138 RARTEELEAILKR 150
Score = 42.0 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFPWL 164
QE + ++++ RA+A + L + P L
Sbjct: 241 QEENPYFSGFNIVTCRAVAPMTKLARMTLPLL 272
>gi|318042306|ref|ZP_07974262.1| 16S rRNA methyltransferase GidB [Synechococcus sp. CB0101]
Length = 249
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVF-----QLHPYPSIWIDLGSGGGFPGIITSIQL 93
W+ ++NL +DFWI V DSL + P ID+G+GGGFPG+ ++
Sbjct: 36 WNGRVNLTRLVEGDDFWIAQVFDSLWPLQQRLQEQAEAPLRCIDVGTGGGFPGLAIAVAF 95
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRIQ---EAPQMITTCDV 144
+ + L++S +K + + +V R++ Q D+
Sbjct: 96 PQAQ---LTLVDSVGRKTQAVEAMAAALGLSDRVQLRCERVELTGRHGQCRGQFDL 148
>gi|328951744|ref|YP_004369079.1| Ribosomal RNA small subunit methyltransferase G [Marinithermus
hydrothermalis DSM 14884]
gi|328452068|gb|AEB12969.1| Ribosomal RNA small subunit methyltransferase G [Marinithermus
hydrothermalis DSM 14884]
Length = 182
Score = 92.9 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+LE + L ++ + ++L S +E+ W H+E +L + P+ +D+GSGGG PGI
Sbjct: 5 RLEAYVELLRRYGQTLDLASPRVLENPWP-HLEAALAYAEPIPHGEAVLDVGSGGGLPGI 63
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
+I +E + L E + ++A+FL V +V+ + + ++
Sbjct: 64 PLAIARPDLE---ITLAEVRKRRAAFLELAVHHLGLTNVRVYNG---DVRKWSGRVAYVT 117
Query: 147 ARALADLDT 155
A+A+A
Sbjct: 118 AQAVASFAD 126
>gi|118474743|ref|YP_892709.1| methyltransferase GidB [Campylobacter fetus subsp. fetus 82-40]
gi|193806438|sp|A0RR76|RSMG_CAMFF RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|118413969|gb|ABK82389.1| methyltransferase GidB [Campylobacter fetus subsp. fetus 82-40]
Length = 182
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDL 78
N+ K+ F + +++K +L + ++ DS++ + + P I ID+
Sbjct: 2 NLPDNFWNKVSEFEIILKQFNKIHSLTNYRDIKPVVE----DSMKPLEFLDFNPKIVIDV 57
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQ 137
GSG GFP I S+ + +L E KK+SFL YV + +I+ +
Sbjct: 58 GSGAGFPAIFLSLI---LNSSEFHLYEPIAKKSSFLSYVGAALNLKNITVHPSKIESCQK 114
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ D+I++RAL+ L+E
Sbjct: 115 I--KADLITSRALSKTLFLIEIC 135
>gi|261885825|ref|ZP_06009864.1| methyltransferase GidB [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 182
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDL 78
N+ K+ F + +++K +L + ++ DS++ + + P I ID+
Sbjct: 2 NLPDNFWNKVREFEIILKQFNKIHSLTNYRDIKPVVE----DSMKPLEFLDFNPKIVIDV 57
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQ 137
GSG GFP I S+ + +L E KK+SFL YV + +I+ +
Sbjct: 58 GSGAGFPAIFLSLI---LNSSEFHLYEPIAKKSSFLSYVGAALNLKNITVHPSKIESCQK 114
Query: 138 MITTCDVISARALADLDTLLEYS 160
+ D+I++RAL+ L+E
Sbjct: 115 I--KADLITSRALSKTLFLIEIC 135
>gi|154148362|ref|YP_001407212.1| methyltransferase GidB [Campylobacter hominis ATCC BAA-381]
gi|193806439|sp|A7I3X1|RSMG_CAMHC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|153804371|gb|ABS51378.1| methyltransferase GidB [Campylobacter hominis ATCC BAA-381]
Length = 183
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFP 85
E++E F K++K ++ + + + +EDSL + P + ID+GSG GFP
Sbjct: 11 EQIEQFGKCLEKFNKIHSITNYNDLSAV----IEDSLEGLKFITEMPKVAIDIGSGAGFP 66
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDV 144
I ++ L + +L E KKA+FL Y + + +I+ I D+
Sbjct: 67 AIFLAMVLPYTKW---HLFEPNTKKAAFLTYAKVNLKLKNIIIHNTKIENETPFI--ADL 121
Query: 145 ISARALADLDTLLEYS 160
I++RA+ + L++ S
Sbjct: 122 ITSRAVMKVPDLIKIS 137
>gi|187918051|ref|YP_001883614.1| methyltransferase GidB [Borrelia hermsii DAH]
gi|238689280|sp|B2RZN8|RSMG_BORHD RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119860899|gb|AAX16694.1| methyltransferase GidB [Borrelia hermsii DAH]
Length = 207
Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHPY--PSI 74
+ + E+++KL+++ L + + NLVS + + D + H DS+ F + P
Sbjct: 13 GVSFTSESIDKLKFYIKRVLLFGSRFNLVSKNDLRFDAVLLHALDSVVGFPIIKDNNPHQ 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSG GFPGII +I L+E NKK +FLR + + R +
Sbjct: 73 VLDVGSGAGFPGIILAIF---DNSRKYVLLERSNKKVTFLRMMSLELGLDNVKVLER--D 127
Query: 135 APQMITTCDVISARAL 150
+ I+ RA
Sbjct: 128 VADEKDKYEFITIRAF 143
>gi|157273313|gb|ABV27212.1| methyltransferase GidB [Candidatus Chloracidobacterium
thermophilum]
Length = 247
Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 14/135 (10%)
Query: 10 LRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
L A +S + L Y L + + + NL + H D L
Sbjct: 28 LVAALAEQGLPLSTSQVAALASHYCLLGEANNQFNLTRLIAPAEAVRWHYLDILAALPYL 87
Query: 70 PYPS---------IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ W+D+GSGGGFPG++ ++ + L E + KKA+FL++ V++
Sbjct: 88 TALAVEGTNGKLVRWVDVGSGGGFPGLVLAVACPNWH---FILAERRAKKAAFLQHCVEE 144
Query: 121 TAA--RGKVFACRIQ 133
A R +VFA +
Sbjct: 145 LALGGRVQVFAGDFE 159
>gi|20807574|ref|NP_622745.1| glucose-inhibited division protein [Thermoanaerobacter
tengcongensis MB4]
gi|20516111|gb|AAM24349.1| glucose-inhibited division protein [Thermoanaerobacter
tengcongensis MB4]
Length = 86
Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDLGSGGGFPGIITS 90
+ LKW++K+NL +S+ E I+H DSL + + ID G+G GFPGI
Sbjct: 6 VEMLLKWNQKMNLAASTEEEKVVIKHFLDSLSLVRYNKIKRQEKVIDTGTGAGFPGIPLK 65
Query: 91 IQLSSIEGGLVNLIESKNKKASF 113
I I L ++ +K+ F
Sbjct: 66 IVFPEIRLTLF--LKHLRRKSIF 86
>gi|254460472|ref|ZP_05073888.1| methyltransferase GidB [Rhodobacterales bacterium HTCC2083]
gi|206677061|gb|EDZ41548.1| methyltransferase GidB [Rhodobacteraceae bacterium HTCC2083]
Length = 151
Score = 90.9 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P W+DLGSGGGFPG++ +I + L+ES +K +FLR V ++T A+ V
Sbjct: 7 PKTLKWVDLGSGGGFPGLVLAIISKELAPQTQFTLVESDQRKCAFLRTVARETGAKITVI 66
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A RI+ D++SARAL+DL LL+Y+
Sbjct: 67 AQRIEGVD--PQNADILSARALSDLPMLLQYA 96
>gi|323447141|gb|EGB03087.1| hypothetical protein AURANDRAFT_15293 [Aureococcus anophagefferens]
Length = 159
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 13/137 (9%)
Query: 38 KWSKKINLVSSSTVED--FWIRHVEDSLRVFQLHPYPS-----IWIDLGSGGGFPGIITS 90
W+ K+N+VS ++ H SL + + + +D+G+GGGFPG+ +
Sbjct: 1 DWNAKVNVVSRKDLDRRKLVELHYLPSLALLNVPGFAGLAPASRVVDVGTGGGFPGLPLA 60
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDVISARA 149
I ++ L +S+ KK ++ A R + + D++ R+
Sbjct: 61 ICRPELD---FTLCDSRRKKVDVVKSCADVANCDNVAPVAGRAPQ--DIAGDHDLVLGRS 115
Query: 150 LADLDTLLEYSFPWLYQ 166
+ +L P L
Sbjct: 116 VKNLPDFFRTVAPALSP 132
>gi|293977917|ref|YP_003543347.1| putative S-adenosylmethionine-dependent methyltransferase
[Candidatus Sulcia muelleri DMIN]
gi|292667848|gb|ADE35483.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in bacterial cell division [Candidatus Sulcia muelleri
DMIN]
Length = 208
Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWID 77
++ + ++K Y + ++KKIN++S++++ F+ RH+ SL V++ SI ID
Sbjct: 12 DLDKSIIKKFMKLYKIHKFFNKKINIISNNSLNFFYERHILHSLCVYKICYFLNKSIIID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI ++ LI+S KK + ++++ + V RI+
Sbjct: 72 VGTGGGFPGIPLALLF---NKTKFILIDSIEKKIKIINLIIKELHLKNVYVKCTRIENFH 128
Query: 137 QMITTCDVISARALADLDTLLEYS-FPWLYQKK 168
C+ I RA+ L + +L+QKK
Sbjct: 129 N---KCNFIIGRAVTKLPNFIRLVKKNFLFQKK 158
>gi|161833806|ref|YP_001598002.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
GWSS]
gi|189040725|sp|A8Z655|RSMG_SULMW RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|152206296|gb|ABS30606.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
GWSS]
Length = 212
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ--LHPYPSIWID 77
++ + ++K Y + ++KKIN++S++++ F+ RH+ SL V++ SI ID
Sbjct: 12 DLDKSIIKKFIKLYKIHKFFNKKINIISNNSLNFFYERHILHSLCVYKICYFLNKSIIID 71
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAP 136
+G+GGGFPGI ++ LI+S KK + ++++ + V RI+
Sbjct: 72 VGTGGGFPGIPLALLF---NKTKFILIDSIEKKIKIINLIIKELHLKNVYVKCTRIENFH 128
Query: 137 QMITTCDVISARALADLDTLLEY 159
C+ I RA+ L +
Sbjct: 129 N---KCNFIIGRAVTKLPNFIRL 148
>gi|119952975|ref|YP_945184.1| methyltransferase GidB [Borrelia turicatae 91E135]
gi|254766882|sp|A1QYX2|RSMG_BORT9 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|119861746|gb|AAX17514.1| methyltransferase GidB [Borrelia turicatae 91E135]
Length = 207
Score = 89.8 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHPY--PSI 74
+ + ++++KL ++ L + + NLVS++ D + HV DS+ + P
Sbjct: 13 GVSFTSKSIDKLRFYIEKVLLFGTRFNLVSNNDRNFDAVLLHVLDSVAGLPIIKDKNPRQ 72
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+GSG GFPGI+ ++ L+E NKKA+FLR + + R +
Sbjct: 73 VLDVGSGAGFPGIVLALF---DNFRKYILLERSNKKATFLRMISLELGLDNIEVLER--D 127
Query: 135 APQMITTCDVISARAL 150
+ + I+ RA
Sbjct: 128 VDKEQNKYEFITIRAF 143
>gi|313681128|ref|YP_004058867.1| methyltransferase gidb [Oceanithermus profundus DSM 14977]
gi|313153843|gb|ADR37694.1| methyltransferase GidB [Oceanithermus profundus DSM 14977]
Length = 180
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
++LE + L +++ NLVS + + + H + ++ P +D+GSG G P
Sbjct: 3 DRLEAYAELLERYAASANLVSPKVLAELPV-HFAAARAYGEVLPEGVHVLDVGSGAGLPA 61
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
I +I + + L E + K+A+FL + +V+ +Q Q +
Sbjct: 62 IPLAIARPDL---TLTLAERRAKRAAFLDLAAARLGLENVRVYNGDVQ---QWSGRTAYV 115
Query: 146 SARALADLDTLLEY 159
+A+A+A D +
Sbjct: 116 TAQAVAPFDVVYRL 129
>gi|330890258|gb|EGH22919.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. mori str.
301020]
Length = 134
Score = 87.9 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
GSGGG PGI +I + V L++S KK F V + +V R + + Q
Sbjct: 1 GSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SYQ 56
Query: 138 MITTCDVISARALADLDTLLEYS 160
D I +RA + L+ ++
Sbjct: 57 PEVPFDGIISRAFSSLEDFTGWT 79
>gi|330898616|gb|EGH30035.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 135
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ 137
GSGGG PGI +I + V L++S KK F V + +V R + + Q
Sbjct: 2 GSGGGMPGIPMAILFPERK---VALLDSNGKKTRFQTQVKLELKLDNLEVIHSRAE-SYQ 57
Query: 138 MITTCDVISARALADLDTLLEYS 160
D I +RA + L+ ++
Sbjct: 58 PEVPFDGIISRAFSSLEDFTGWT 80
>gi|206896370|ref|YP_002247455.1| 16S rRNA methyltransferase GidB [Coprothermobacter proteolyticus
DSM 5265]
gi|206738987|gb|ACI18065.1| 16S rRNA methyltransferase GidB [Coprothermobacter proteolyticus
DSM 5265]
Length = 210
Score = 87.5 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 25 TLEKLEYFYFLFLKWSKKINLV----SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
E L+ F W L T ED W +EDSL V +D+G
Sbjct: 3 QEEHLKQFASKL--W-----LTDYLHGYRTPEDLWTFGIEDSLAVLNHVELRGRVLDIGP 55
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQ-M 138
GGG PGI+ +I L ++ L++S K FL + V RI++ +
Sbjct: 56 GGGLPGIVLAIVLRDVQ---FTLVDSSQKSCKFLTEITSALGLTNVQVLHERIEDFGKVH 112
Query: 139 ITTCDVISARALADLDTLLEY-SFPW 163
D +RA+A++ L EY + P
Sbjct: 113 REEYDFAISRAVAEIRILAEYVAAPL 138
>gi|313678715|ref|YP_004056455.1| methyltransferase GidB [Mycoplasma bovis PG45]
gi|312950099|gb|ADR24694.1| methyltransferase GidB [Mycoplasma bovis PG45]
Length = 195
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 50 TVEDFWIRHVEDSLRVFQ-------LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
+V++ + + + S+ VF+ L +D+G+G GFP + I L + +
Sbjct: 5 SVDEIFNQGILGSILVFENAMNEYGLDFVNKKILDIGAGAGFPSVPLLIALDN--KFELV 62
Query: 103 LIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
++ES K+ +FL V + + R +E + D I ARA+
Sbjct: 63 IMESITKRCTFLESVKNEFNLNLTIINARAEEINDYNSYFDYICARAVGS 112
>gi|330890257|gb|EGH22918.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv. mori
str. 301020]
Length = 77
Score = 84.8 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
++S E+L + L +KW+K NL + ++ RH+ DSL V + WID
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWID 76
Query: 78 L 78
+
Sbjct: 77 V 77
>gi|203284098|ref|YP_002221838.1| glucose inhibited division protein B [Borrelia duttonii Ly]
gi|226795818|sp|B5RL03|RSMG_BORDL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|201083541|gb|ACH93132.1| glucose inhibited division protein B [Borrelia duttonii Ly]
Length = 210
Score = 84.4 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVS--SSTVEDFWIRHVEDSLRVFQLHPY--PSIW 75
N + E ++KL ++ L +S + NLVS + + H DS+ + P
Sbjct: 15 NFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLL-HALDSVSGLPIVKDKNPRQV 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFPGI+ ++ L+E NKKA FL+ + +
Sbjct: 74 LDVGSGAGFPGIVLALF---DRCRKYVLLERSNKKAIFLKMISLELGLENVEVLE--HNV 128
Query: 136 PQMITTCDVISARALADLDT 155
+ + I+ RA D+
Sbjct: 129 EEEQNKYEFITIRAFGDIRK 148
>gi|149924590|ref|ZP_01912946.1| methyltransferase GidB [Plesiocystis pacifica SIR-1]
gi|149814556|gb|EDM74140.1| methyltransferase GidB [Plesiocystis pacifica SIR-1]
Length = 237
Score = 83.6 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 21/179 (11%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRET--LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRH 58
M ++ I RA + E L+K+ + + NL S D H
Sbjct: 25 MTAVSADEIARAA---EDLGLPEEAVDLDKVLILKDFLKFYGRAANLTGSLADADL-DAH 80
Query: 59 VEDSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
V + L++ L W+D+GSGGGFPG++ +I L + L+E + K+A L
Sbjct: 81 VIEGLQLVALARQLGVQGRWLDIGSGGGFPGLVLAIGL----DLQLTLVEPREKRADLLT 136
Query: 116 YVVQKTA-ARGKVFACRIQ-------EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++K A +V RI E + D SARA+ + + + PWL
Sbjct: 137 LGLRKLGRADCEVLRGRIDGGQWRGIEGGPLEPGFDACSARAVFEPERWVREGGPWLRP 195
>gi|203287636|ref|YP_002222651.1| glucose inhibited division protein B [Borrelia recurrentis A1]
gi|226795819|sp|B5RQZ6|RSMG_BORRA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|201084856|gb|ACH94430.1| glucose inhibited division protein B [Borrelia recurrentis A1]
Length = 210
Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVS--SSTVEDFWIRHVEDSLRVFQLHPYPSI--W 75
N + E ++KL ++ L +S + NLVS + + H DS+ + ++
Sbjct: 15 NFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLL-HALDSVSGLPIVKDKNLRQV 73
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+GSG GFPGI+ ++ L+E NKKA FL+ + +
Sbjct: 74 LDVGSGAGFPGIVLALF---DRCRKYVLLERSNKKAIFLKMISLELGLENVEVLE--HNV 128
Query: 136 PQMITTCDVISARALADLDT 155
+ + I+ RA D+
Sbjct: 129 EEEQNKYEFITIRAFGDIRK 148
>gi|225571870|ref|ZP_03780740.1| hypothetical protein CLOHYLEM_07844 [Clostridium hylemonae DSM
15053]
gi|225159475|gb|EEG72094.1| hypothetical protein CLOHYLEM_07844 [Clostridium hylemonae DSM
15053]
Length = 66
Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV 65
+ IL+ +++ E+ E FY L ++W+K +NL + E+ +H DSL +
Sbjct: 1 MSKILKTKLQELNISINDRQEEQFEQFYDLLIEWNKVMNLTGITEYEEVVEKHFVDSLSL 60
Query: 66 FQLHP 70
+
Sbjct: 61 VKAIE 65
>gi|313895121|ref|ZP_07828678.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312976016|gb|EFR41474.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 120
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV- 65
IL A ++ LE+ + L L W++++NL + + ED ++H+ DSL
Sbjct: 6 REILAARAAAFGMALTNAQLEQCVRYNELLLTWNERMNLTALTAPEDVAVKHIVDSLSAY 65
Query: 66 -FQLHPYPSIWIDLGSGG 82
L ID+G+G
Sbjct: 66 DAPLFARAKSLIDVGTGA 83
>gi|183222814|ref|YP_001840810.1| glucose-inhibited division protein B [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912846|ref|YP_001964401.1| glucose inhibited division protein B [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|193806445|sp|B0S902|RSMG_LEPBA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|238687847|sp|B0SRZ9|RSMG_LEPBP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|167777522|gb|ABZ95823.1| Glucose inhibited division protein B [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167781236|gb|ABZ99534.1| Glucose-inhibited division protein B [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 247
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 15/146 (10%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ------LHPYPSIWIDLGSGGGFP 85
FY + ++K S + E RH+ +SL + D+G+G G P
Sbjct: 33 FYDFLKRDNEKGGFFSKNDSEKILERHILESLIFVWKLKTTGYVSRETNVADVGTGPGLP 92
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ----EAPQMITT 141
G + ++ + + V L++S+ +K + L + T R++ ++ +
Sbjct: 93 GFLFAVLKKAPQ---VFLVDSQKRKLALLE--AEITTGSLSKVKKRVEFIYARTEEISSN 147
Query: 142 CDVISARALADLDTLLEYSFPWLYQK 167
DV+++RA+ L E + + QK
Sbjct: 148 FDVVTSRAMVPYPYLAEVTTRMVKQK 173
>gi|251772737|gb|EES53299.1| glucose inhibited division protein [Leptospirillum
ferrodiazotrophum]
Length = 200
Score = 81.7 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL----HPYPSIW 75
+++ + + L+ + L L+W+ I L + E + + + F P
Sbjct: 11 SLTPKQMSALDRYTSLLLEWNTHIRLTGYHSQEQVREHLLLEPILAFHYLQGRLPNSLPR 70
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
ID GSG G PG++ ++ L+E KK FL V + +
Sbjct: 71 IDFGSGNGSPGLVMALLDPD---HSYLLVERVQKKRIFLENVSRHLSLSNVTV 120
>gi|312601598|gb|ADQ90853.1| Ribosomal RNA small subunit methyltransferase G [Mycoplasma
hyopneumoniae 168]
Length = 149
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G GFP I I IE + + ES K+ FL+ V +K + + +Q
Sbjct: 17 KILDIGAGSGFPSIPFLITNPEIE---LTISESMQKRCQFLKDVSEKLDLKFNLICKPVQ 73
Query: 134 EAPQMITTCDVISARALADLDTL 156
E D+I+ARA+A+L+ L
Sbjct: 74 EI--NPQKFDIITARAVANLEKL 94
>gi|228988711|ref|ZP_04148796.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771023|gb|EEM19504.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 65
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+S LE+ E ++ ++W++K+NL + + E+ +++H DS+ L
Sbjct: 13 KGITLSSRQLEQFEIYFETLVEWNEKMNLTAITEKEEVYLKHFFDSITAAFLL 65
>gi|195953331|ref|YP_002121621.1| glucose inhibited division protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932943|gb|ACG57643.1| glucose inhibited division protein [Hydrogenobaculum sp. Y04AAS1]
Length = 176
Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVF-QLHPYP-SIWIDLGSGGGFPGI 87
E + LKW+K L+S + + RH++D+ +F +L + D+G+G GF G+
Sbjct: 8 EIYINEILKWNKVHKLISKADESKIFERHIKDAEEIFYKLKDFDIKEIADVGAGAGFLGV 67
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ SI ++ V+LIE KK +FL ++ K +V + T +
Sbjct: 68 VFSILDKDLK---VSLIEVVAKKCAFLEHIKVKLGLNYEVLCKDATRLEK---TFEATIE 121
Query: 148 RALA-DLDTLL 157
RA LD +
Sbjct: 122 RAFGKPLDIVS 132
>gi|320335881|ref|YP_004172592.1| glucose inhibited division protein [Deinococcus maricopensis DSM
21211]
gi|319757170|gb|ADV68927.1| glucose inhibited division protein [Deinococcus maricopensis DSM
21211]
Length = 185
Score = 80.9 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
+ L +++ ++L + + D W RH +++ P + +D+GSGGG PGI+ +
Sbjct: 6 YEALVRQYAPALDLFGPAVLRD-WARHEATAMKYAARLPAGAHLLDVGSGGGLPGIVIAR 64
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
+ + V L E + ++A+FL+ V + + + +SA+A+A
Sbjct: 65 ERPDVH---VTLCERRERRATFLKLAVARLGLTNADVF--AGDVRDWRGQTNWVSAQAVA 119
Query: 152 DLDTLLEY 159
D+D L+
Sbjct: 120 DVDDLIGL 127
>gi|330898615|gb|EGH30034.1| 16S rRNA methyltransferase GidB [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 75
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWI 76
++S E+L + L +KW+K NL + ++ RH+ DSL V + WI
Sbjct: 18 GIDLSPAQHEQLLAYLALLIKWNKAYNLTAVRNPDEMVSRHLLDSLSVVPFI-EGTRWI 75
>gi|217077737|ref|YP_002335455.1| methyltransferase GidB [Thermosipho africanus TCF52B]
gi|217037592|gb|ACJ76114.1| methyltransferase GidB [Thermosipho africanus TCF52B]
Length = 212
Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 24 ETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
E + + + + + +NL + +E + DSL + + + ++D+G+GGG
Sbjct: 4 EKKQVILKYLKEII--NAPLNLTAIKELELAYQLLAMDSLIPLRENDVGNNFLDVGTGGG 61
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-QKTAARGKVFACRIQEAPQMITTC 142
PG+ I + G L++S KK F+R V + + RI+E +I
Sbjct: 62 VPGVFIGIMFENSRG---LLVDSSRKKIDFVREVCNKLNLNNLEFLNARIEEKKDLIEKF 118
Query: 143 DVISARALADLDTLLEYSFPW 163
D + +RA+A+L +LE + P+
Sbjct: 119 DSVFSRAVAELRVILELTVPF 139
>gi|330813394|ref|YP_004357633.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486489|gb|AEA80894.1| rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB
[Candidatus Pelagibacter sp. IMCC9063]
Length = 161
Score = 79.4 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 57 RHVEDSLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFL 114
RH+EDS ++ + + +D+GSG GFPGI+ I + + ++++E +KK ++L
Sbjct: 3 RHIEDSAQLLKYINIEDNNILDIGSGAGFPGIVMYIIKNDLNINFKLDIVEKSSKKCTYL 62
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLL 157
+ + + + + + + +RA LD+ L
Sbjct: 63 QELCKFLEIDVAIHNHDVNNLKKKD--YTTLVSRAFKPLDSFL 103
>gi|77410352|ref|ZP_00786760.1| Unknown [Streptococcus agalactiae COH1]
gi|77171039|gb|EAO74500.1| Unknown [Streptococcus agalactiae COH1]
Length = 130
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQ---MITTCDVISARALAD 152
G + +I+S NK+ +FL + + G F R ++ Q D+++ARA+A
Sbjct: 2 PGIDITIIDSLNKRINFLNILANELELSGVHFFHGRAEDFGQDKVFRAKFDIVTARAVAR 61
Query: 153 LDTLLEYSFPWLY 165
+ L E + P+L
Sbjct: 62 MQVLAELTIPFLK 74
>gi|115374110|ref|ZP_01461398.1| methyltransferase GidB [Stigmatella aurantiaca DW4/3-1]
gi|115368886|gb|EAU67833.1| methyltransferase GidB [Stigmatella aurantiaca DW4/3-1]
Length = 149
Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVF 128
+ +DLG+G GFPG+ + ++ V L+++ KK FL+ + + +
Sbjct: 2 EGAASLLDLGAGAGFPGLPLKLARPAL---AVTLVDAVGKKVGFLKAAIAALGLKEARGL 58
Query: 129 ACRIQEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQ 166
R + P+ +++ ARA DL L + ++
Sbjct: 59 HLRAEGDPEREGIPRAELLIARAFMDLPDWLALAPAYVRP 98
>gi|330040660|ref|XP_003239986.1| glucose-inhibited division protein B [Cryptomonas paramecium]
gi|327206912|gb|AEA39088.1| glucose-inhibited division protein B [Cryptomonas paramecium]
Length = 251
Score = 78.2 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 26/166 (15%)
Query: 23 RETLEKLEYFYFLFLKW----------SKKINLVSSSTVEDFWIRHVEDSLRV------F 66
+ +++ + L W + NL+S+ ++E F+ H+ DSL +
Sbjct: 46 EQKIQQF--LFELPRAWVTFIEHVLIRNIYTNLISTRSLEIFYKTHLVDSLTLTSTLSAL 103
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +ID+G+G GFPGII SI L LI+ KK +F + +
Sbjct: 104 WIIRKKRFYIDIGTGNGFPGIILSIILPKC---FFFLIDPTKKKVNFHYLTLLFLGLKNS 160
Query: 127 VF----ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQKK 168
++ + C +I RA+ + L + F +L QK+
Sbjct: 161 KILLLKTNQLCKIKIFYNPCSIILTRAICKIVLLFDICF-FLIQKE 205
>gi|224531849|ref|ZP_03672481.1| methyltransferase GidB [Borrelia valaisiana VS116]
gi|224511314|gb|EEF81720.1| methyltransferase GidB [Borrelia valaisiana VS116]
Length = 208
Score = 77.8 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 15/149 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSST--VEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSG 81
L+K+ + L + + NL+S+S HV DSL PS +D+GSG
Sbjct: 21 LQKINLYIKRILLLNTRFNLISNSNSNFNAILNLHVIDSLLGLSTIKEINPSEVLDVGSG 80
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GFPGI+ +I +S + L+E KK++FL+ + + E +
Sbjct: 81 AGFPGIVLAIFDTSRK---YYLLERSKKKSTFLKMIKLELDLENVKILE--YEIEREKKK 135
Query: 142 CDVISARALADLDTLLEYSF---PWLYQK 167
+ I+ RA ++ EY+ L K
Sbjct: 136 HEFITIRAFRSMN---EYALILKNLLKDK 161
>gi|297625196|ref|YP_003706630.1| glucose inhibited division protein [Truepera radiovictrix DSM
17093]
gi|297166376|gb|ADI16087.1| glucose inhibited division protein [Truepera radiovictrix DSM
17093]
Length = 212
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY----PSI 74
++V + +L + L ++S ++L+S +E+F + V +SL L
Sbjct: 2 FHVKHDLAAQLAGYAALVRRYSGALDLMSPRAIENFEDK-VAESLVYADLIEPHLSPAER 60
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQ 133
+DLGSG G PGI +++ + L+E + K+A FL VV +V A +
Sbjct: 61 LLDLGSGVGLPGIPLALRFPD---APLILVERRRKRARFLELVVAHLQLANVRVMATDAR 117
Query: 134 EA-PQMITTCDVISARALADLDTL 156
P + ++A+A+ L
Sbjct: 118 ALSPDDVGRVAWVTAQAVGSFPLL 141
>gi|87301282|ref|ZP_01084123.1| putative glucose inhibited division protein B [Synechococcus sp. WH
5701]
gi|87284250|gb|EAQ76203.1| putative glucose inhibited division protein B [Synechococcus sp. WH
5701]
Length = 244
Score = 76.3 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLH----PYPSIWIDLGSGGGFPGIITSIQLS 94
W+ ++NL +D+WI V DSL ++ P +D+G+GGGFPG+
Sbjct: 38 WNARLNLTRLVDGDDYWIAQVYDSLWPWRDQLNTPSQPLRCLDVGTGGGFPGLA---LAI 94
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMI 139
++ + L++S +KA ++ + R +V R + Q
Sbjct: 95 ALPAARLTLVDSVGRKAEAVKAMAASLGLGERVQVRWERAEATGQAR 141
>gi|228988710|ref|ZP_04148795.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771022|gb|EEM19503.1| Ribosomal RNA small subunit methyltransferase G [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 144
Score = 74.8 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQ---EAPQMITTCDVISARALADLDTL 156
+ +++S K+ +FL ++ QK F R + + + D++ ARA+A L L
Sbjct: 1 MTIVDSLQKRINFLNHLAQKLELSEVAFCHDRAETFGKKEGVREAYDIVMARAVARLSVL 60
Query: 157 LEYSFPWLY 165
E P +
Sbjct: 61 SELCLPLVK 69
>gi|207093508|ref|ZP_03241295.1| glucose-inhibited division protein B [Helicobacter pylori
HPKX_438_AG0C1]
Length = 77
Score = 73.6 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
+ L+W++ NL + + + + D+L+ + +D+GSG G P I +++
Sbjct: 2 ILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFIKDFKSCLDIGSGAGLPAIPLALEKP 60
Query: 95 SIEGGLVNLIESKNKKASFL 114
++ L+E + K+A+FL
Sbjct: 61 EVK---FILLEPRIKRAAFL 77
>gi|213621534|ref|ZP_03374317.1| glucose-inhibited division protein B [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 56
Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH 69
+++ L + + KW+K NL S + +RH+ DS+ V
Sbjct: 1 SLTDHQKTLLVAYVDMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYL 50
>gi|111114999|ref|YP_709617.1| glucose inhibited division protein B [Borrelia afzelii PKo]
gi|123047052|sp|Q0SNY7|RSMG_BORAP RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|110890273|gb|ABH01441.1| glucose inhibited division protein B [Borrelia afzelii PKo]
Length = 208
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I SS + L+E KK++FL+
Sbjct: 55 HVIDSLLGLPTIKEANPSEILDVGSGAGFPGIILAIFDSSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILE--YEIEREKKKYEFITIRAFRSMN---EYAL 152
>gi|216263790|ref|ZP_03435784.1| 16S rRNA methyltransferase GidB [Borrelia afzelii ACA-1]
gi|215979834|gb|EEC20656.1| 16S rRNA methyltransferase GidB [Borrelia afzelii ACA-1]
Length = 208
Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I SS + L+E KK++FL+
Sbjct: 55 HVIDSLLGLPTIKEANPSEILDVGSGAGFPGIILAIFDSSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILE--YEIEREKKKYEFITIRAFRSMN---EYAL 152
>gi|219684672|ref|ZP_03539615.1| methyltransferase GidB [Borrelia garinii PBr]
gi|219672034|gb|EED29088.1| methyltransferase GidB [Borrelia garinii PBr]
Length = 208
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGI+ +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTIKEINPSEILDVGSGAGFPGIVLAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILE--YEIEREKKKYEFITIRAFRSMN---EYAL 152
>gi|219685817|ref|ZP_03540626.1| methyltransferase GidB [Borrelia garinii Far04]
gi|219672650|gb|EED29680.1| methyltransferase GidB [Borrelia garinii Far04]
Length = 208
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGI+ +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTIKEINPSEILDVGSGAGFPGIVLAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILE--YEIEREKKKYEFITIRAFRSMN---EYAL 152
>gi|256370766|ref|YP_003108591.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
SMDSEM]
gi|256009558|gb|ACU52918.1| glucose-inhibited division protein B [Candidatus Sulcia muelleri
SMDSEM]
Length = 232
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 28 KLEYFYFLFLKWS---KKINLVSSSTVEDFWIRHVEDSLRVFQLHPY--PSIWIDLGSGG 82
KL+ + L+ ++ K IN+ S + F+ +H +L + ++ + SI +D+G+GG
Sbjct: 21 KLKIYI-LYKIYNFYYKNINIFSKKSFNGFFEKHCIHTLSISKIMKFLKKSIVLDVGTGG 79
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITT 141
GFPGI +I + + LI+S KK ++ ++ + + RI+ +
Sbjct: 80 GFPGIPLAIMFNETK---FILIDSIKKKIKIIQIIIDELHLNNVQIVCTRIENFEK---K 133
Query: 142 CDVISARALADLDTLLEY 159
C+ I RA+ L ++
Sbjct: 134 CNFILGRAVTQLSNFIKL 151
>gi|224534193|ref|ZP_03674771.1| methyltransferase GidB [Borrelia spielmanii A14S]
gi|224514295|gb|EEF84611.1| methyltransferase GidB [Borrelia spielmanii A14S]
Length = 208
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLPTIKEINPSEILDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILE--YEIERERKAYEFITIRAFRSMN---EYAI 152
>gi|51598438|ref|YP_072626.1| glucose inhibited division protein B [Borrelia garinii PBi]
gi|81610175|sp|Q662I7|RSMG_BORGA RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|51573009|gb|AAU07034.1| glucose inhibited division protein B [Borrelia garinii PBi]
Length = 208
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGI+ +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLPTIKEINPSEILDVGSGSGFPGIVLAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILE--YEIEREKKKYEFITIRAFRSMN---EYAL 152
>gi|229082695|ref|ZP_04215143.1| Ribosomal RNA small subunit methyltransferase G [Bacillus cereus
Rock4-2]
gi|228700614|gb|EEL53152.1| Ribosomal RNA small subunit methyltransferase G [Bacillus cereus
Rock4-2]
Length = 138
Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 107 KNKKASFLRYVVQKTAARGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFP 162
K+ +FL ++ QK F R + + + + D++ ARA+A L L E P
Sbjct: 1 MQKRINFLNHLAQKLELSDVAFCHDRAETFGKKEGVRESYDIVMARAVARLSVLSELCLP 60
Query: 163 WLY 165
+
Sbjct: 61 LVK 63
>gi|256372783|ref|YP_003110607.1| glucose inhibited division protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256009367|gb|ACU54934.1| glucose inhibited division protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 218
Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--ARGKVF 128
W+DLGSGGG PG+I +++L + EG L++++ ++A+FL V+ AR ++
Sbjct: 39 GAERWVDLGSGGGIPGLIVALELPASEG---LLVDARQRRAAFLTEAVRALNWSARVRIA 95
Query: 129 ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A R + + ++ D + AR E ++
Sbjct: 96 AERGEVLARSKEIRERADAVVARGFGAPPVTAEIGSGFVR 135
>gi|260576111|ref|ZP_05844104.1| glucose inhibited division protein [Rhodobacter sp. SW2]
gi|259021591|gb|EEW24894.1| glucose inhibited division protein [Rhodobacter sp. SW2]
Length = 128
Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 87 IITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
++ + + ++ LIE+ +KA+FLR Q+ + +V A RI+ P DV+
Sbjct: 1 MVLACIAAELQPQARFTLIEADQRKATFLRQAAQELNLKVQVLAQRIESTP--PQAADVV 58
Query: 146 SARALADLDTLLEYSF 161
SARALA LD LL Y+
Sbjct: 59 SARALAPLDQLLSYAA 74
>gi|313616476|gb|EFR89370.1| ribosomal RNA small subunit methyltransferase G [Listeria innocua
FSL S4-378]
Length = 131
Score = 67.4 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 113 FLRYVVQKTAARGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
FL + +K F R + + D+++ARA+A + L E P + +
Sbjct: 1 FLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 58
>gi|150021215|ref|YP_001306569.1| methyltransferase GidB [Thermosipho melanesiensis BI429]
gi|189040728|sp|A6LMN3|RSMG_THEM4 RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|149793736|gb|ABR31184.1| methyltransferase GidB [Thermosipho melanesiensis BI429]
Length = 209
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+ NL + E+ + DSL + ++D+G+GGG PG+ I ++G
Sbjct: 16 NAPFNLTAIKNEEEAFHLLALDSLLPLEKMNLIGNFLDVGTGGGVPGVFIGIMFKKLKGT 75
Query: 100 LVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALADLDTLLE 158
LI++ KK ++++ V K + RI+E I D + ++A+A+L +LE
Sbjct: 76 ---LIDASRKKINYVKNVCIKLGIDNLEFVHGRIEEQIDFIEKFDNVFSKAVAELRIILE 132
Query: 159 YSFPWLY 165
+ P+
Sbjct: 133 LTVPYAK 139
>gi|309808194|ref|ZP_07702104.1| ribosomal RNA small subunit methyltransferase G domain protein
[Lactobacillus iners LactinV 01V1-a]
gi|308168575|gb|EFO70683.1| ribosomal RNA small subunit methyltransferase G domain protein
[Lactobacillus iners LactinV 01V1-a]
Length = 56
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 24/55 (43%)
Query: 6 SNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
++ I + L +S E+ +Y + ++K NL + ++ +++H
Sbjct: 2 NSDIFKELLLKQGIELSARQQEQFRTYYHQLIVANEKTNLTRITEEDEVYLKHFL 56
>gi|226320916|ref|ZP_03796467.1| methyltransferase GidB [Borrelia burgdorferi 29805]
gi|226233688|gb|EEH32418.1| methyltransferase GidB [Borrelia burgdorferi 29805]
Length = 208
Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDASRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMN---EYAL 152
>gi|15594522|ref|NP_212311.1| glucose inhibited division protein B (gidB) [Borrelia burgdorferi
B31]
gi|223889270|ref|ZP_03623858.1| methyltransferase GidB [Borrelia burgdorferi 64b]
gi|3915712|sp|P53363|RSMG_BORBU RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase;
AltName: Full=Glucose-inhibited division protein B
gi|2688060|gb|AAC66558.1| glucose inhibited division protein B (gidB) [Borrelia burgdorferi
B31]
gi|223885303|gb|EEF56405.1| methyltransferase GidB [Borrelia burgdorferi 64b]
Length = 208
Score = 64.0 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I SS + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDSSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA +++ EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRNMN---EYAL 152
>gi|312148248|gb|ADQ30907.1| methyltransferase GidB [Borrelia burgdorferi JD1]
Length = 208
Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMN---EYAL 152
>gi|216264819|ref|ZP_03436811.1| 16S rRNA methyltransferase GidB [Borrelia burgdorferi 156a]
gi|224532871|ref|ZP_03673486.1| methyltransferase GidB [Borrelia burgdorferi WI91-23]
gi|215981292|gb|EEC22099.1| 16S rRNA methyltransferase GidB [Borrelia burgdorferi 156a]
gi|224512260|gb|EEF82646.1| methyltransferase GidB [Borrelia burgdorferi WI91-23]
Length = 208
Score = 63.6 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMN---EYAL 152
>gi|225548551|ref|ZP_03769599.1| methyltransferase GidB [Borrelia burgdorferi 94a]
gi|225370814|gb|EEH00249.1| methyltransferase GidB [Borrelia burgdorferi 94a]
Length = 208
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMN---EYAL 152
>gi|218249711|ref|YP_002374705.1| 16S rRNA methyltransferase GidB [Borrelia burgdorferi ZS7]
gi|221217526|ref|ZP_03588996.1| methyltransferase GidB [Borrelia burgdorferi 72a]
gi|225549788|ref|ZP_03770752.1| methyltransferase GidB [Borrelia burgdorferi 118a]
gi|226321495|ref|ZP_03797021.1| methyltransferase GidB [Borrelia burgdorferi Bol26]
gi|226725353|sp|B7J1B0|RSMG_BORBZ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|218164899|gb|ACK74960.1| 16S rRNA methyltransferase GidB [Borrelia burgdorferi ZS7]
gi|221192589|gb|EEE18806.1| methyltransferase GidB [Borrelia burgdorferi 72a]
gi|225369596|gb|EEG99045.1| methyltransferase GidB [Borrelia burgdorferi 118a]
gi|226232684|gb|EEH31437.1| methyltransferase GidB [Borrelia burgdorferi Bol26]
gi|312149521|gb|ADQ29592.1| methyltransferase GidB [Borrelia burgdorferi N40]
Length = 208
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMN---EYAL 152
>gi|225552022|ref|ZP_03772962.1| methyltransferase GidB [Borrelia sp. SV1]
gi|225371020|gb|EEH00450.1| methyltransferase GidB [Borrelia sp. SV1]
Length = 208
Score = 62.8 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA ++ EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMN---EYAL 152
>gi|255520542|ref|ZP_05387779.1| 16S rRNA methyltransferase GidB [Listeria monocytogenes FSL J1-175]
Length = 129
Score = 62.8 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 116 YVVQKTAARGKVF-ACRIQ---EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ +K F R + + D+++ARA+A + L E P + +
Sbjct: 2 ALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKK 56
>gi|301168596|emb|CBW28186.1| methyltransferase GidB [Bacteriovorax marinus SJ]
Length = 213
Score = 62.4 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL-------HPYPSIWIDLGSGGG 83
++ L INL +T E+F+ + + DS+ ++ + +D+G GGG
Sbjct: 7 KYHDLLTGEYGGINLTRITTFEEFYQKQIVDSIIPLEVSKVFKKTLENNKVVVDVGFGGG 66
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRIQ 133
FP + + + E++ KKA ++ + K + + RI+
Sbjct: 67 FPILPLAYLYPDKKFIGF---EARGKKAKVVQEIADKLGLKNVKCYHQRIE 114
>gi|195941908|ref|ZP_03087290.1| glucose inhibited division protein B (gidB) [Borrelia burgdorferi
80a]
Length = 208
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA + EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMH---EYAL 152
>gi|224534081|ref|ZP_03674664.1| methyltransferase GidB [Borrelia burgdorferi CA-11.2a]
gi|224512780|gb|EEF83148.1| methyltransferase GidB [Borrelia burgdorferi CA-11.2a]
Length = 208
Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 58 HVEDSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV DSL PS +D+GSG GFPGII +I +S + L+E KK++FL+
Sbjct: 55 HVIDSLLGLSTVKEINPSEVLDVGSGAGFPGIILAIFDTSRK---YYLLERSKKKSTFLK 111
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ + E + I+ RA + EY+
Sbjct: 112 MIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMH---EYAL 152
>gi|253800969|ref|YP_003033971.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
KZN 1435]
gi|289556187|ref|ZP_06445397.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis KZN 605]
gi|297733601|ref|ZP_06962719.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
KZN R506]
gi|313660932|ref|ZP_07817812.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
KZN V2475]
gi|253322473|gb|ACT27076.1| glucose-inhibited division protein B [Mycobacterium tuberculosis
KZN 1435]
gi|289440819|gb|EFD23312.1| glucose-inhibited division protein B gid [Mycobacterium
tuberculosis KZN 605]
Length = 137
Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 109 KKASFLRYVVQKTAARGKVFACRIQE--APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
++ FLR +V ++ R +E + D +RA+A LD L ++S P +
Sbjct: 9 RRTEFLREMVTDLGVAVEIVRGRAEESWVQDQLGGSDAAVSRAVAALDKLTKWSMPLIRP 68
>gi|297724643|ref|NP_001174685.1| Os06g0239000 [Oryza sativa Japonica Group]
gi|255676877|dbj|BAH93413.1| Os06g0239000 [Oryza sativa Japonica Group]
Length = 110
Score = 58.6 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++P DV ARA+A+L L EY P +
Sbjct: 4 VGQSPDFREAFDVAVARAVAELKVLAEYCLPLVR 37
>gi|24217047|ref|NP_714528.1| glucose-inhibited division protein B [Leptospira interrogans
serovar Lai str. 56601]
gi|45659303|ref|YP_003389.1| glucose inhibited division protein B [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|81567802|sp|Q72LR3|RSMG_LEPIC RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|81589507|sp|Q8EY69|RSMG_LEPIN RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|24198458|gb|AAN51546.1| glucose-inhibited division protein B [Leptospira interrogans
serovar Lai str. 56601]
gi|45602549|gb|AAS72026.1| glucose inhibited division protein B [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 254
Score = 57.8 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 31 YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIW-----IDLGSGGGF 84
F + ++ S E+ RHV +S+ V+++ W D G+G G
Sbjct: 38 KFTVFLKEKNEAGGFFSKRDSEEILDRHVLESIYHVYRITKKIGSWKGTQLGDAGTGPGI 97
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCD 143
PG E +V LI+S+ +K S V+ G F R +E+ + +
Sbjct: 98 PGFFFRCL---KEHPIVVLIDSQKRKLSHTENFVRSNQIDGVKFQFIRAEESK---LSLN 151
Query: 144 VISARAL 150
+++R
Sbjct: 152 YVTSRGF 158
>gi|326392913|ref|ZP_08214119.1| glucose inhibited division protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325991046|gb|EGD49832.1| glucose inhibited division protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 77
Score = 57.0 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 126 KVFACRIQEAPQ---MITTCDVISARALADLDTLLEYSFPWL 164
++ R ++ + D+ ARA+A L+ LLEY+ P++
Sbjct: 7 ELIHGRAEDIGKDIKYREQFDLSVARAVAPLNVLLEYTLPFV 48
>gi|163848559|ref|YP_001636603.1| methyltransferase small [Chloroflexus aurantiacus J-10-fl]
gi|222526494|ref|YP_002570965.1| methyltransferase small [Chloroflexus sp. Y-400-fl]
gi|163669848|gb|ABY36214.1| methyltransferase small [Chloroflexus aurantiacus J-10-fl]
gi|222450373|gb|ACM54639.1| methyltransferase small [Chloroflexus sp. Y-400-fl]
Length = 207
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P P +D+G G G GI + + + V L++ + R+ + A
Sbjct: 50 IEPAFPEPQRILDVGCGCGVIGICLARRFPQAD---VTLVDKDLLAVRYARHNAELNATT 106
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 107 NVTVLGSVGLSEAPPGPYDLIVS 129
>gi|207110004|ref|ZP_03244166.1| glucose-inhibited division protein B [Helicobacter pylori
HPKX_438_CA4C1]
Length = 137
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ SI + E + K+A+FL Y+ + E Q + D+I+
Sbjct: 57 LVFSISSPEL--------EPRIKRAAFLNYLKSVLPLNNIEIVKKRLEDYQNLLQVDLIT 108
Query: 147 ARALADLDTLLEYSFPWLYQK 167
+RA+A L+E S +L K
Sbjct: 109 SRAVASSSFLIERSQRFLKDK 129
>gi|313895196|ref|ZP_07828753.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312976091|gb|EFR41549.1| putative 16S rRNA methyltransferase GidB [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 38
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 138 MITTCDVISARALADLDTLLEYSFPWLY 165
D+ +RA+A L L EY+ P++
Sbjct: 4 YRAQYDIAVSRAVARLPVLAEYALPFVR 31
>gi|308272065|emb|CBX28673.1| hypothetical protein N47_G39970 [uncultured Desulfobacterium sp.]
Length = 358
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 20/130 (15%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL---RVFQLHPYPSIWIDLGSG 81
+ F + K ++ IRH S+ ++ DLG G
Sbjct: 132 QYPDFQQFMAELS--NAKH--------KEVLIRHFLPSVDKGQLVNHLIKGIRVCDLGCG 181
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF----ACRIQEAPQ 137
G + + I++ + + R + V+ A I +
Sbjct: 182 EGVALNLMAKAFPE---STFTGIDNHKEAINTARTGAGELGLSNVVYIEHDAATICGKKE 238
Query: 138 MITTCDVISA 147
+ D ISA
Sbjct: 239 FMQKFDYISA 248
>gi|189183833|ref|YP_001937618.1| 3-demethylubiquinone-9 3-methyltransferase [Orientia tsutsugamushi
str. Ikeda]
gi|189180604|dbj|BAG40384.1| 3-demethylubiquinone-9 3-methyltransferase [Orientia tsutsugamushi
str. Ikeda]
Length = 246
Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 49/142 (34%), Gaps = 21/142 (14%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKK--------INLVSSSTVEDFWIRH--VEDSLRVF 66
N + +E +EK + W+ +N ++ + H + DS+
Sbjct: 3 NNSTIDQEEIEKFNTIANEW--WNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSIT-- 58
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ D+G GGG I + G V I++ +K + + K A+
Sbjct: 59 -RPFHGLKIADIGCGGGITSIPMAKL-----GATVTGIDASSKNIAVAKMYANKIGAQVN 112
Query: 127 VFACRIQEAPQMI-TTCDVISA 147
I+E ++ DV+
Sbjct: 113 YIHSSIEEYVKISNEKYDVVLC 134
>gi|116329511|ref|YP_799231.1| glucose-inhibited division protein B [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116329826|ref|YP_799544.1| glucose inhibited division protein B [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|122282399|sp|Q04WD4|RSMG_LEPBJ RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|122282710|sp|Q04X97|RSMG_LEPBL RecName: Full=Ribosomal RNA small subunit methyltransferase G;
AltName: Full=16S rRNA 7-methylguanosine
methyltransferase; Short=16S rRNA m7G methyltransferase
gi|116122255|gb|ABJ80298.1| Glucose-inhibited division protein B [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116123515|gb|ABJ74786.1| Glucose inhibited division protein B [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 254
Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 21/155 (13%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIW-----IDLG 79
LE + F + ++ S + RHV +S+ V+++ W D G
Sbjct: 33 LELICKFTLFLKEKNEVGGFFSKRDSMEILDRHVLESIYHVYRITKKIGSWKGIQLGDAG 92
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
+G G PG + +V LI+S+ +K S V+ F E ++
Sbjct: 93 TGPGIPGFFFRCLKA---YPVVVLIDSQKRKLSHTESFVRSNRITDLKFQFIRTEESKLS 149
Query: 140 TTCDVISAR----------ALADLDTLLEYSFPWL 164
+ +R A+++L + P+L
Sbjct: 150 LNY--VVSRGFIPYPYSVEAVSNLIKIGGTYVPFL 182
>gi|148284890|ref|YP_001248980.1| ubiquinone biosynthesis O-methyltransferase [Orientia tsutsugamushi
str. Boryong]
gi|146740329|emb|CAM80736.1| Ubiquinone biosynthesis O-methyltransferase [Orientia tsutsugamushi
str. Boryong]
Length = 246
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 47/142 (33%), Gaps = 21/142 (14%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKK--------INLVSSSTVEDFWIRH--VEDSLRVF 66
N + ++ +EK + W+ +N ++ + H + DS+
Sbjct: 3 NNSTIDQDEIEKFNTIANEW--WNPNGKFNQLHLMNPARIRFIKQKILLHYNLIDSIT-- 58
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ D+G GGG I + G V I++ K + R K +
Sbjct: 59 -RPFHGLKIADIGCGGGITSIPMAKL-----GATVTGIDASCKNIAVARMHANKIGIQVN 112
Query: 127 VFACRIQEAPQMI-TTCDVISA 147
I+E ++ DV+
Sbjct: 113 YIHSSIEEYAKISNEKYDVVLC 134
>gi|294791886|ref|ZP_06757034.1| ubiquinone/menaquinone biosynthesis methyltransferase [Veillonella
sp. 6_1_27]
gi|294457116|gb|EFG25478.1| ubiquinone/menaquinone biosynthesis methyltransferase [Veillonella
sp. 6_1_27]
Length = 249
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 28/91 (30%), Gaps = 12/91 (13%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ DS +D+G G GF II S G V+ I+ +
Sbjct: 52 HIFDS-------DRSLRILDIGCGAGFFSIILSQL-----GHTVHGIDITPNMIDEANQL 99
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + T D++ AR
Sbjct: 100 AESLDCDATFSVMDAENLGFDTNTFDIVVAR 130
>gi|282850233|ref|ZP_06259612.1| methyltransferase domain protein [Veillonella parvula ATCC 17745]
gi|282579726|gb|EFB85130.1| methyltransferase domain protein [Veillonella parvula ATCC 17745]
Length = 249
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 28/91 (30%), Gaps = 12/91 (13%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ DS +D+G G GF II S G V+ I+ +
Sbjct: 52 HIFDS-------DRSLRILDIGCGAGFFSIILSQL-----GHTVHGIDITPNMIDEANQL 99
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + T D++ AR
Sbjct: 100 AESLDCEATFSVMDAENLGFDTNTFDIVVAR 130
>gi|238019283|ref|ZP_04599709.1| hypothetical protein VEIDISOL_01147 [Veillonella dispar ATCC 17748]
gi|237863982|gb|EEP65272.1| hypothetical protein VEIDISOL_01147 [Veillonella dispar ATCC 17748]
Length = 249
Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 12/91 (13%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ DS +D+G G GF II S G V+ I+ +
Sbjct: 52 HIFDS-------DRSLRILDIGCGAGFFSIILSEL-----GHTVHGIDITPNMIDEANQL 99
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + + T D++ AR
Sbjct: 100 AESLQSDATFSVMDAENLSFDTNTFDIVVAR 130
>gi|269127313|ref|YP_003300683.1| type 12 methyltransferase [Thermomonospora curvata DSM 43183]
gi|268312271|gb|ACY98645.1| Methyltransferase type 12 [Thermomonospora curvata DSM 43183]
Length = 275
Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 5/83 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
Q P +D+G G G + + GL+ ++ + LR + R
Sbjct: 59 AVQALPEGGTVLDVGCGAGGASLPLA-----GRAGLIVGVDPEEHLLEALRASGRHLGVR 113
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ R + + DV+
Sbjct: 114 VETVRGRWPDVAAEVAPADVVVC 136
>gi|303228979|ref|ZP_07315789.1| methyltransferase domain protein [Veillonella atypica
ACS-134-V-Col7a]
gi|302516393|gb|EFL58325.1| methyltransferase domain protein [Veillonella atypica
ACS-134-V-Col7a]
Length = 249
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 12/91 (13%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ DS +D+G G GF II S G V+ I+ + +
Sbjct: 52 HIFDS-------DRSLRILDIGCGAGFFSIILSEL-----GHTVHGIDITPNMIEEAKQL 99
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISAR 148
Q + + T D++ AR
Sbjct: 100 AQSLDSDATFSVMDAENLSFDTNTFDIVVAR 130
>gi|313894548|ref|ZP_07828112.1| methyltransferase domain protein [Veillonella sp. oral taxon 158
str. F0412]
gi|313440944|gb|EFR59372.1| methyltransferase domain protein [Veillonella sp. oral taxon 158
str. F0412]
Length = 249
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 12/98 (12%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
D H+ DS +D+G G GF II S G V+ I+
Sbjct: 45 WRDELTSHIFDS-------DRSLRILDIGCGAGFFSIILSQL-----GHTVHGIDITPNM 92
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + + T D++ AR
Sbjct: 93 IDEANQLAESLDCDATFSVMDAENLSFDSNTFDIVVAR 130
>gi|303231467|ref|ZP_07318198.1| methyltransferase domain protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302513904|gb|EFL55915.1| methyltransferase domain protein [Veillonella atypica
ACS-049-V-Sch6]
Length = 249
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 12/91 (13%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ DS +D+G G GF II S G V+ I+ + +
Sbjct: 52 HIFDS-------DRSLRILDIGCGAGFFSIILSEL-----GHTVHGIDITPNMIEEAKQL 99
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISAR 148
Q + + T D++ AR
Sbjct: 100 AQSLDSDATFSVMDAENLSFDTNTFDIVVAR 130
>gi|326392912|ref|ZP_08214118.1| glucose inhibited division protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325991045|gb|EGD49831.1| glucose inhibited division protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 51
Score = 48.2 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 62 SLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
SL V + +D+G+G GFP I I ++ L+++ K+ F
Sbjct: 1 SLSVVKSGKIKGDEKLLDVGTGAGFPSIPLKIVFPKLKAT---LLDASKKELLF 51
>gi|307353043|ref|YP_003894094.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
gi|307156276|gb|ADN35656.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
Length = 242
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 38/119 (31%), Gaps = 24/119 (20%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSI--EGGLVNL 103
+ W + + + P ++G+G G + ++ L+ + V+L
Sbjct: 30 IKEEMEVWKK------TLSEYIPEGKTIRAAEIGTGPG----VLALALADLGHSATGVDL 79
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
E KKA+ ++ K + D++ + L ++ P
Sbjct: 80 SEEMIKKAA---NRAEELGIDAKFMQGDAENLSLDDGAYDLVIS-------KYLMWTLP 128
>gi|269798005|ref|YP_003311905.1| methyltransferase type 11 [Veillonella parvula DSM 2008]
gi|269094634|gb|ACZ24625.1| Methyltransferase type 11 [Veillonella parvula DSM 2008]
Length = 249
Score = 47.8 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 28/91 (30%), Gaps = 12/91 (13%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ DS +D+G G GF II S G V+ I+ +
Sbjct: 52 HIFDS-------DRSLRILDIGCGAGFFSIILSQL-----GHTVHGIDITPNMIDEANQL 99
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISAR 148
Q + T D++ AR
Sbjct: 100 AQSLDCDATFSVMDAENLSFDTNTFDIVVAR 130
>gi|294793746|ref|ZP_06758883.1| SmtA protein [Veillonella sp. 3_1_44]
gi|294455316|gb|EFG23688.1| SmtA protein [Veillonella sp. 3_1_44]
Length = 249
Score = 47.4 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 12/91 (13%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ DS R +D+G G GF II S G V+ I+ +
Sbjct: 52 HIFDSYRSL-------RILDIGCGAGFFSIILSQL-----GHTVHGIDITPNMIDEANQL 99
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + T D++ AR
Sbjct: 100 AESLDCDATFSVMDAENLGFDTNTFDIVVAR 130
>gi|81428745|ref|YP_395745.1| putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei
subsp. sakei 23K]
gi|78610387|emb|CAI55437.1| Putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei
subsp. sakei 23K]
Length = 289
Score = 47.4 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 13/103 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + P +D+G+G G I + + + V+ ++ + + Q
Sbjct: 106 LSVAPVKDRPLKVLDVGTGSGAIAITLACERPDWQ---VSAVDISPAAIAVAQQNAQTLG 162
Query: 123 ARGKVFACRIQEAPQMITTCDVISA---------RALADLDTL 156
A+ P M DVI + R++ D L
Sbjct: 163 AKVDFIEGDF-LTPVMGQQFDVIVSNPPYIAEDERSVMDASVL 204
>gi|303247690|ref|ZP_07333960.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ]
gi|302490962|gb|EFL50859.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ]
Length = 454
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 13/104 (12%)
Query: 63 LRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS---FLRYVV 118
V +L P P +D+G+G G + +G V +E + + +
Sbjct: 230 AAVRELLPTPGGKALDVGAGRGIASYALA-----ADGWEVTALEPDPSRLVGHGAIEEIA 284
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARAL----ADLDTLLE 158
+ T +V A R + P + DV+ AR + +DL+ +
Sbjct: 285 RATGLPIRVVAERGERLPFPDDSFDVVHARQVLHHASDLNAMCR 328
>gi|294101476|ref|YP_003553334.1| Methyltransferase type 11 [Aminobacterium colombiense DSM 12261]
gi|293616456|gb|ADE56610.1| Methyltransferase type 11 [Aminobacterium colombiense DSM 12261]
Length = 232
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 13/104 (12%)
Query: 60 EDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + S +D+G+G GF + + +G V I+ + +F R +
Sbjct: 35 WHDIFLAPFKDKKSLRLLDMGAGTGFLSLGFA-----KKGHRVTGIDLSPEMVNFARKMA 89
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
++ + F QE P + D I+ R + L ++ P
Sbjct: 90 REKNISIEFFLGDAQEPPLFSSPFDGITCR-----NLL--WTLP 126
>gi|295107738|emb|CBL21691.1| Predicted deacylase [Ruminococcus obeum A2-162]
Length = 817
Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 12/95 (12%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G G GF I+ + EG V I+ R + ++ +
Sbjct: 622 EKNLKILDVGCGAGFFSILLA-----KEGYQVTGIDLTPDMIKNARLLAEEEKVSCEFQV 676
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ T DV+ +R +L ++ P +
Sbjct: 677 MDAENPEFPDETFDVVISR---NLT----WTLPHV 704
>gi|158425924|ref|YP_001527216.1| ubiquinone biosynthesis O-methyltransferase [Azorhizobium
caulinodans ORS 571]
gi|172047842|sp|A8HVC4|UBIG_AZOC5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|158332813|dbj|BAF90298.1| ubiquinone biosynthesis O-methyltransferase [Azorhizobium
caulinodans ORS 571]
Length = 253
Score = 47.0 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 30/100 (30%), Gaps = 12/100 (12%)
Query: 51 VEDFWIRHVED---SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
V D +RH SLR + +D+G GGG + + + ++
Sbjct: 45 VRDVLVRHFGHDARSLRPLK----GLRILDIGCGGGLLSEPLARMGAD-----MVGVDPA 95
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + R +E DV+ A
Sbjct: 96 PGNIVVAQSHADEAGVRVDYRQGTAEELADAGERFDVVLA 135
>gi|153813751|ref|ZP_01966419.1| hypothetical protein RUMOBE_04185 [Ruminococcus obeum ATCC 29174]
gi|149830159|gb|EDM85252.1| hypothetical protein RUMOBE_04185 [Ruminococcus obeum ATCC 29174]
Length = 796
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 12/100 (12%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+G G GF I+ + G V I+ R + Q+ A
Sbjct: 619 LPDDNKKLRILDVGCGAGFFTILLAKA-----GHQVTGIDLTPDMIKNARILAQEEGADC 673
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + T DVI +R +L ++ P +
Sbjct: 674 EFTVMDAENPEFPDDTFDVIISR---NLT----WTLPHVR 706
>gi|110635031|ref|YP_675239.1| methyltransferase type 12 [Mesorhizobium sp. BNC1]
gi|110286015|gb|ABG64074.1| Methyltransferase type 12 [Chelativorans sp. BNC1]
Length = 248
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 12/116 (10%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ R+ + +D+G GF +I++ G V I+S
Sbjct: 38 DYPNIKWRNFAH---IIPDDLQGRSVLDIGCNAGF----YAIEMKRRNAGRVLGIDSDPH 90
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ ++ A + + E ++ D++ + L P L
Sbjct: 91 YLRQAEFAAEQLGADVEFRQMSVYELGRLKEKFDLVIF-----MGVLYHLRHPLLA 141
>gi|291242043|ref|XP_002740918.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 347
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
++ D+G G G P + + + V+L E + ++ C
Sbjct: 159 GAVACDVGCGSGIPVCTLAQLYPACKFYGVDLSEKAI--TAAQNRALEMKLTNVTFIQCD 216
Query: 132 IQE-APQMITTCDVISARAL 150
A I D++ A+
Sbjct: 217 ASSMAEDWIEKFDIVVTMAV 236
>gi|134293400|ref|YP_001117136.1| methyltransferase type 11 [Burkholderia vietnamiensis G4]
gi|134136557|gb|ABO57671.1| Methyltransferase type 11 [Burkholderia vietnamiensis G4]
Length = 283
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G G G + +I + ++ + + R ++ + Q
Sbjct: 53 VLDVGCGTG--AVTLAIARRLAKDAQCTGVDISARMIAAARERAERDGVAAEFVHADAQT 110
Query: 135 APQMITTCDVISAR 148
P D+I +R
Sbjct: 111 HPFARERFDLIVSR 124
>gi|149174307|ref|ZP_01852934.1| UbiE/COQ5 methyltransferase [Planctomyces maris DSM 8797]
gi|148846852|gb|EDL61188.1| UbiE/COQ5 methyltransferase [Planctomyces maris DSM 8797]
Length = 256
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G+G G ++ + + G + ++ S R ++
Sbjct: 55 PCKILDMGTGPG----TIALLWAEL-GHAITGVDFSATMISAGREAAKERGLTVDFVEAD 109
Query: 132 IQEAPQMITTCDVISARAL 150
++ P T D+IS+RA+
Sbjct: 110 VEAPPFPENTFDIISSRAV 128
>gi|15607057|ref|NP_214439.1| ribosomal protein L11 methyltransferase [Aquifex aeolicus VF5]
gi|38605117|sp|O67870|PRMA_AQUAE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|2984305|gb|AAC07828.1| ribosomal protein L11 methyltransferase [Aquifex aeolicus VF5]
Length = 245
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 7/84 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I +I + + V I+ K + R +
Sbjct: 107 ALKKYLKEGMTVLDVGTGSG----ILAIVSALLGAKRVVGIDIDEKAVNECRENAELNKV 162
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
+ + F E + + D++ A
Sbjct: 163 KVECFRA---EPKDVNESFDLVVA 183
>gi|237801726|ref|ZP_04590187.1| hypothetical protein POR16_23066 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024585|gb|EGI04641.1| hypothetical protein POR16_23066 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 314
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH++D+ +V S +D+G G G G++ ++ + V ++ K F +
Sbjct: 126 RHLQDTSQVI------SRAVDIGCGTGAGGLLIAVARPDAQ---VFAVDINPKALHFAQT 176
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V C+ + T D+I A
Sbjct: 177 NAALAGLEN-VECCQSDILSGVTGTFDLIVA 206
>gi|213962836|ref|ZP_03391096.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Capnocytophaga sputigena Capno]
gi|213954493|gb|EEB65815.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Capnocytophaga sputigena Capno]
Length = 287
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + YP +D+G+G G I + L +V I+ K + + +
Sbjct: 106 LQTYPDKNYPLHILDIGTGSGCIPISLAKALPK---SVVTAIDVSPKAITVAQRNADRNG 162
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + C I + + DVI +
Sbjct: 163 VKIQFLQCDILQTKTLPQKYDVIIS 187
>gi|167519989|ref|XP_001744334.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777420|gb|EDQ91037.1| predicted protein [Monosiga brevicollis MX1]
Length = 343
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D+G+G G G+ +E V +E + +R Q+
Sbjct: 148 LALASLESNTRHIVDVGAGTGAIGLALLSTRPGVE---VTAVEPHPTAQALIRRNAQRLG 204
Query: 123 A--RGKVFACRIQEAPQMITTCDVISA 147
R V R+Q+ D+I A
Sbjct: 205 LADRLHVLCGRLQDVALAWDQADLIVA 231
>gi|325264034|ref|ZP_08130766.1| methyltransferase, UbiE/COQ5 family [Clostridium sp. D5]
gi|324030518|gb|EGB91801.1| methyltransferase, UbiE/COQ5 family [Clostridium sp. D5]
Length = 381
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 23/124 (18%)
Query: 43 INL---------VSSSTVEDFWIRH-------VEDS--LRVFQLHPYPSIWIDLGSGGGF 84
INL + +++ + +H S + + P +D+G+ GF
Sbjct: 3 INLKDRITVYWDIRATSYDQMRQKHLHGREFQFWKSEMKSILPVSDKPLKILDIGTATGF 62
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
+I +S+ G V ++ R ++ + + DV
Sbjct: 63 ----MAIVCASL-GHKVTAVDISRHMLKRARSAAAESGFSVTFLQMDAHQLDFPSGSFDV 117
Query: 145 ISAR 148
+ R
Sbjct: 118 VICR 121
>gi|311748034|ref|ZP_07721819.1| methyltransferase [Algoriphagus sp. PR1]
gi|126575016|gb|EAZ79374.1| methyltransferase [Algoriphagus sp. PR1]
Length = 235
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ P+ S +D+G G G ++ +L ++ LV+L + KA + V + +
Sbjct: 43 SAKRIVPHASHVLDVGCGAGNYTLMMLSKLPNLHCTLVDLSQPMLDKA--VERVSKVSKG 100
Query: 124 RGKVFACRIQEAPQMITTCDVISARAL 150
+ K I+EA D+I A A+
Sbjct: 101 KIKSVQADIREAELEDHGFDIILAGAV 127
>gi|126177977|ref|YP_001045942.1| methyltransferase type 11 [Methanoculleus marisnigri JR1]
gi|125860771|gb|ABN55960.1| Methyltransferase type 11 [Methanoculleus marisnigri JR1]
Length = 213
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FAC 130
+D+GSG G I L+ V L++S + + V++ G+V +
Sbjct: 44 GRCLDIGSGPG----SLGIALAQASALAVTLLDSSPEMIAIAGGNVREAGLSGRVALLSG 99
Query: 131 RIQEAPQMITTCDVISAR 148
+ E P + D+ +R
Sbjct: 100 DVHEIPLPDRSVDLAVSR 117
>gi|196228092|ref|ZP_03126959.1| Methyltransferase type 11 [Chthoniobacter flavus Ellin428]
gi|196227495|gb|EDY21998.1| Methyltransferase type 11 [Chthoniobacter flavus Ellin428]
Length = 259
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +D+ +G G G+ + G V + +R Q+ +
Sbjct: 42 LPPVAQVLDVATGAGHTGLYLASL-----GHQVTCTDLAAPMLDRVREAAQERGLSVETR 96
Query: 129 ACRIQEAPQMITTCDVISARALAD 152
+E P + D++++R +A
Sbjct: 97 QHPAEEFPYAEASFDLVTSR-VAP 119
>gi|20092700|ref|NP_618775.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
gi|19917988|gb|AAM07255.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
Length = 251
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 18/117 (15%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
+S E+ W + + S +D+GSG GF ++ + G V I+
Sbjct: 27 TASKEEEEAW-KGLLRS-----KLDDAEKILDIGSGTGFLSLMLADM-----GYEVVGID 75
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + ++ ++ + D I RA+ ++ P
Sbjct: 76 LSEEMIARASAKAKERGLSIDFHQDDAEQLGFENNSFDAIVNRAVL-------WTLP 125
>gi|20092161|ref|NP_618236.1| ribosomal RNA adenine dimethylase [Methanosarcina acetivorans C2A]
gi|19917387|gb|AAM06716.1| ribosomal RNA adenine dimethylase [Methanosarcina acetivorans C2A]
Length = 274
Score = 45.5 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
+D+G+G G + + V +E A L ++K + R
Sbjct: 61 TALDIGAGAGSMTVPLAKICK-----RVTAVEPSKTMARILSSNLKKAGLDNVQIINSRW 115
Query: 133 QEAPQMITTCDVISA----------RALADLDTLLE 158
++AP+ I D+I A +A+ +++L
Sbjct: 116 EDAPEEIERHDIIIAAYSLMIDDIEKAVLRMNSLAR 151
>gi|325109041|ref|YP_004270109.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
gi|324969309|gb|ADY60087.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
Length = 279
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 17/109 (15%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+NLV+ + ++ P +D+G G G + QL ++ L+
Sbjct: 80 AMNLVAQT---------------ASRVTPQGKRLLDIGCGAGNYTLALLQQLPGLDVTLL 124
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
+L + +A + V + A+ K I++ P TCD+I A A+
Sbjct: 125 DLSQPMLDRAE--QRVREAGASSVKTVQGDIRKLPVEPGTCDIILAAAV 171
>gi|219850518|ref|YP_002464951.1| methyltransferase small [Chloroflexus aggregans DSM 9485]
gi|219544777|gb|ACL26515.1| methyltransferase small [Chloroflexus aggregans DSM 9485]
Length = 202
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG G G GI + + + V L++ + R+ A
Sbjct: 57 PQHILDLGCGCGVIGICLARRFPNAH---VTLVDKDLLAVRYARHNAILNATPNVTVLGS 113
Query: 132 IQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 114 VGLSDAPPGPYDLIVS 129
>gi|307354695|ref|YP_003895746.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
gi|307157928|gb|ADN37308.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
Length = 288
Score = 45.1 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 11/94 (11%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V + L P + +D+G G G I + + V I+ +K +L+
Sbjct: 56 VLELLEEVGFKPEGARVLDIGCGPGALAIPLARAGAD-----VTAIDISSKTLEYLKDNA 110
Query: 119 QKTAARGKVFAC-----RIQEAPQMITTCDVISA 147
+K C I E D++ +
Sbjct: 111 EKEGLSVHPVKCHWWTADIDELG-FRDQFDLVIS 143
>gi|146302347|ref|YP_001196938.1| methyltransferase type 11 [Flavobacterium johnsoniae UW101]
gi|146156765|gb|ABQ07619.1| Methyltransferase type 11 [Flavobacterium johnsoniae UW101]
Length = 235
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
++ P + +D+G G G + ++ + LV+L +A V +T +
Sbjct: 46 RIVPNAATVLDVGCGAGNYTLKMLSKVPDLNCTLVDLSLPMLNRA--FERVAAETNGKVV 103
Query: 127 VFACRIQEAPQMITTCDVISARAL 150
+ I+E + D+I A A+
Sbjct: 104 IKQGDIREIDLEENSFDIILAGAV 127
>gi|237750886|ref|ZP_04581366.1| LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase
G [Helicobacter bilis ATCC 43879]
gi|229373331|gb|EEO23722.1| LOW QUALITY PROTEIN: ribosomal RNA small subunit methyltransferase
G [Helicobacter bilis ATCC 43879]
Length = 122
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACRIQEAPQMITTC 142
P +I + + + L+E + K+ SFL + KV A +
Sbjct: 4 IPALILACYYTDSK---FYLLEPRKKRVSFLENAIISMGLSHVKVIADYSYNIKDIKG-- 58
Query: 143 DVISARALADLDTLLEYSFPWL 164
D+I++RA+ D L+ S L
Sbjct: 59 DLITSRAVCRSDILVRDSRHLL 80
>gi|322373099|ref|ZP_08047635.1| methyltransferase domain protein [Streptococcus sp. C150]
gi|321278141|gb|EFX55210.1| methyltransferase domain protein [Streptococcus sp. C150]
Length = 196
Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 14/95 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +SL + +D+G G G I L+ ++G V +I+ ++ +
Sbjct: 49 LLNSLDL----EDGKTLLDVGCGYG----PLGISLAKVQGVKVTMIDINSRAIDLAKQNA 100
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
++ +F I + D I + RA
Sbjct: 101 ERNKVDVDIFQSNI--YENVTGNFDYIISNPPIRA 133
>gi|73668011|ref|YP_304026.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Methanosarcina barkeri str. Fusaro]
gi|72395173|gb|AAZ69446.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Methanosarcina barkeri str. Fusaro]
Length = 259
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 10/99 (10%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
W + L + P P +D+GSG G I ++ L+ + G V ++
Sbjct: 37 EESQMWSK-----LLSGAIGPGPKNVLDVGSGTG----IIAMYLAEL-GHRVTAVDFSEG 86
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
R + A + ++ T D I+AR
Sbjct: 87 MMDVARKKALEKGANIRFMEMDVENLNFEDETFDFITAR 125
>gi|296122494|ref|YP_003630272.1| methyltransferase type 11 [Planctomyces limnophilus DSM 3776]
gi|296014834|gb|ADG68073.1| Methyltransferase type 11 [Planctomyces limnophilus DSM 3776]
Length = 246
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +D+G G G + + ++ L++L E +A + TA
Sbjct: 52 IPGAQELLDIGCGAGNFSLKLLQAIPTMNVTLIDLSEPMLHRAR--SRLETSTAKTISSI 109
Query: 129 ACRIQEAPQMITTCDVISARAL 150
I+E D++ A A+
Sbjct: 110 QGDIRELKLPPQKFDLVVAAAV 131
>gi|87300674|ref|ZP_01083516.1| hypothetical protein WH5701_04480 [Synechococcus sp. WH 5701]
gi|87284545|gb|EAQ76497.1| hypothetical protein WH5701_04480 [Synechococcus sp. WH 5701]
Length = 373
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 11/101 (10%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ +E RH P +DLG G G + + E ++L S
Sbjct: 175 GRTVIEQVLARH--------HAGLRPRRILDLGCGAGHSTLPYAAAFPEAEVWGIDLGAS 226
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ AS + + + D+I +
Sbjct: 227 LLRYAS---ARARLLDHAVHFAQQDAERTGFGDRSFDLIVS 264
>gi|219852193|ref|YP_002466625.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
gi|219546452|gb|ACL16902.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
Length = 298
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 12/91 (13%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS+ + P S +D+G+G G I + G V ++E L +Q
Sbjct: 77 LDSMSI----PDGSRVLDIGAGPGTYAIPLA-----ARGCKVTVVEPSPVMRELLEARIQ 127
Query: 120 KTAARG-KVFACRIQE--APQMITTCDVISA 147
+ V R ++ ++ D + A
Sbjct: 128 EEKIENLVVIPKRWEDVRVGELGEPFDAVIA 158
>gi|56460032|ref|YP_155313.1| hypothetical protein IL0924 [Idiomarina loihiensis L2TR]
gi|56179042|gb|AAV81764.1| Protoporphyrinogen oxidase [Idiomarina loihiensis L2TR]
Length = 281
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 34/118 (28%), Gaps = 10/118 (8%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
F+ L L+ + L+ E + P + +DLG+G G +
Sbjct: 75 REFWSLMLEVNAST-LIPRPDTETLVE------AALSLELPENARVLDLGTGTGAVALAL 127
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + V + R Q ++ ++ D+I +
Sbjct: 128 KSERPGWQ---VWACDKSGDAVELARRNSQALGLNVEILCSNWFQSVPKSLKFDLILS 182
>gi|237745911|ref|ZP_04576391.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS]
gi|229377262|gb|EEO27353.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS]
Length = 287
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 7/88 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +L P +DLG+G G + + + V + K R
Sbjct: 109 LALARL-PEGGRVVDLGTGSGAIAVAIAAMRPDAQ---VWATDISGKALDIARKNAASCL 164
Query: 123 ARGKVFACRIQ---EAPQMITTCDVISA 147
G+ R EA + + D+I +
Sbjct: 165 KNGQSVRFRQGNWYEALEPGSRFDLIVS 192
>gi|85711947|ref|ZP_01043001.1| HemK [Idiomarina baltica OS145]
gi|85694133|gb|EAQ32077.1| HemK [Idiomarina baltica OS145]
Length = 282
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + P + +DLG+G G + + + V ++ S + ++
Sbjct: 109 SLSL----PADARVLDLGTGTGAIALALKSERPDWQ---VTAVDWSASAVSLAQRNARRL 161
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+V ++ + D+I +
Sbjct: 162 GLAVEVLHSHWFDSLADRSVYDLIVS 187
>gi|299116524|emb|CBN74712.1| 3-demethylubiquinone-9 3-methyltransferase [Ectocarpus siliculosus]
Length = 323
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 29/146 (19%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKK----------INLVSSSTVEDFWIRHVEDSLRVFQLH 69
N+S E LEK + + W+ +N+ + +R V SL H
Sbjct: 69 NISEEELEKFRHLEKEW--WNPASRQGAGPLHSMNVTRV----QYIVRQVGSSLPEASPH 122
Query: 70 ------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--T 121
+D+G GGG + + V ++ + + Q
Sbjct: 123 WGSATPLAGLRALDVGCGGGLLSESLARLGAE-----VVGVDPSPENVAVASAHAQGDPL 177
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+ A +E D++++
Sbjct: 178 TRTIRYEATTAEELENRGEQFDLVTS 203
>gi|290580442|ref|YP_003484834.1| hypothetical protein SmuNN2025_0916 [Streptococcus mutans NN2025]
gi|254997341|dbj|BAH87942.1| hypothetical protein [Streptococcus mutans NN2025]
Length = 198
Score = 44.3 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +SL +DLG G G I L+ ++ V +++ N+ R
Sbjct: 49 LLNSL----DFAEGKTLLDLGCGYG----PLGIALAKVQKLDVTMVDINNRALDLTRQNA 100
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
+ +F I + + D I + RA
Sbjct: 101 ENNEVSANIFQSDI--YENVFDSFDYIISNPPIRA 133
>gi|24379557|ref|NP_721512.1| hypothetical protein SMU.1125c [Streptococcus mutans UA159]
gi|24377502|gb|AAN58818.1|AE014950_1 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 198
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +SL +DLG G G I L+ ++ V +++ N+ R
Sbjct: 49 LLNSL----DFAEEKTLLDLGCGYG----PLGIALAKVQKLDVTMVDINNRALDLTRQNA 100
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
+ +F I + + D I + RA
Sbjct: 101 ENNEVSANIFQSDI--YENVFDSFDYIISNPPIRA 133
>gi|312863385|ref|ZP_07723623.1| methyltransferase small domain protein [Streptococcus vestibularis
F0396]
gi|322516989|ref|ZP_08069879.1| methyltransferase domain protein [Streptococcus vestibularis ATCC
49124]
gi|311100921|gb|EFQ59126.1| methyltransferase small domain protein [Streptococcus vestibularis
F0396]
gi|322124472|gb|EFX95967.1| methyltransferase domain protein [Streptococcus vestibularis ATCC
49124]
Length = 196
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G I L+ ++G V +I+ ++ + ++ +F
Sbjct: 55 LEAGKTVLDVGCGYG----PLGISLAKVQGVKVTMIDINSRAIDLAKQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I + + D + + RA
Sbjct: 111 QSNI--YKNVTGSFDYVISNPPIRA 133
>gi|253577952|ref|ZP_04855224.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850270|gb|EES78228.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 837
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 12/95 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L +D+G G GF I+ + G V I+ R + ++ A
Sbjct: 636 LPDGKLRILDVGCGAGFFSILLAKL-----GHEVTGIDLTPDMIIHSRELAKEENASCTF 690
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ T DVI +R +L ++ P
Sbjct: 691 EVMDAENPDFPDGTFDVIVSR---NLT----WTLP 718
>gi|124028185|ref|YP_001013505.1| methyltransferase [Hyperthermus butylicus DSM 5456]
gi|123978879|gb|ABM81160.1| predicted Methyltransferase [Hyperthermus butylicus DSM 5456]
Length = 198
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 15/105 (14%)
Query: 47 SSSTVED---FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
S V++ I H + P +D+G G G GI + + V +
Sbjct: 37 SPREVDEGTRLLIEH--------AIVPEEGTVLDMGCGYGAIGITLAKAHPRLH---VVM 85
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVISA 147
++ K R + +V + + D I +
Sbjct: 86 VDVNPKAVELARLNARHNGVENRVEVLQGDLYEPVKGYHFDAIIS 130
>gi|325578684|ref|ZP_08148760.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
parainfluenzae ATCC 33392]
gi|325159723|gb|EGC71854.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
parainfluenzae ATCC 33392]
Length = 330
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 17/102 (16%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G G G G + E V + + R + + G V A
Sbjct: 189 PIQGKVLDVGCGAGVIGSMIKKYHPKTE---VTMTDIHAMAIQSARQTLAENQLEGNVIA 245
Query: 130 CRIQEAPQMITTCDVISA------------RALADLDTLLEY 159
+ + D+I + RA+ +L ++
Sbjct: 246 SDV--FSHIEGKFDLIISNPPFHDGIDTAYRAVKELIQQAKW 285
>gi|242372063|ref|ZP_04817637.1| SAM-dependent methyltransferase [Staphylococcus epidermidis
M23864:W1]
gi|242350175|gb|EES41776.1| SAM-dependent methyltransferase [Staphylococcus epidermidis
M23864:W1]
Length = 240
Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 17/101 (16%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ +E + H DS++ +D+G+G GF +I S + V I+
Sbjct: 36 INEIERYV--H-LDSIQ---------TILDIGTGAGF----LAILCSKYD-CDVTGIDIS 78
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + + Q+ + + + D++ AR
Sbjct: 79 PEMIHQAQNLSQELNVHIQFKVMDAEGLNFADDSFDLVIAR 119
>gi|330723257|gb|AEC45627.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Mycoplasma hyorhinis MCLD]
Length = 243
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 15/125 (12%)
Query: 26 LEKLEYFY---FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
++K+ F L LK +KK+ L+ E+ L+ ++ S +DLG G
Sbjct: 42 IQKIIGFVCMQNLQLKINKKV-LIPRYETEELI-------LQAYKYINGQSTVLDLGCGS 93
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GF G+ + + + V L + ++ + + + K+ + + +
Sbjct: 94 GFIGLAIA---KNTKAKQVVLSDIDSQAILQSKINAKLNKLKVKIIQSDLFDNLK-KYKF 149
Query: 143 DVISA 147
DVI
Sbjct: 150 DVIIC 154
>gi|304373117|ref|YP_003856326.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
[Mycoplasma hyorhinis HUB-1]
gi|304309308|gb|ADM21788.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
[Mycoplasma hyorhinis HUB-1]
Length = 243
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 15/125 (12%)
Query: 26 LEKLEYFY---FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG 82
++K+ F L LK +KK+ L+ E+ L+ ++ S +DLG G
Sbjct: 42 IQKIIGFVCMQNLQLKINKKV-LIPRYETEELI-------LQAYKYINGQSTVLDLGCGS 93
Query: 83 GFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
GF G+ + + + V L + ++ + + + K+ + + +
Sbjct: 94 GFIGLAIA---KNTKAKQVVLSDIDSQAILQSKINAKLNKLKVKIIQSDLFDNLK-KYKF 149
Query: 143 DVISA 147
DVI
Sbjct: 150 DVIIC 154
>gi|301059346|ref|ZP_07200273.1| methyltransferase domain protein [delta proteobacterium NaphS2]
gi|300446575|gb|EFK10413.1| methyltransferase domain protein [delta proteobacterium NaphS2]
Length = 248
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 12/91 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
ID+G+G G +I L + G V I+ K R Q+ R
Sbjct: 46 GRRAIDVGTGTGQ----FAIYLGRL-GFHVIGIDISEKMVRKARDNAQEYGLRIDFQTQD 100
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFP 162
++ T DVI +R + L ++ P
Sbjct: 101 AEDLLFKDNTFDVIVSR-----NLL--WTLP 124
>gi|268326444|emb|CBH40032.1| conserved hypothetical protein, SAM-dependent methyltransferase
type 11 family [uncultured archaeon]
Length = 260
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 16/115 (13%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ + + + +L P +D+G+G GF SI L+ I G V I+
Sbjct: 26 RTEEQRNAWKQFF----LEKLGKKPLKILDVGTGTGF----LSISLAEI-GHEVMGIDIS 76
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
S R +K + + T D++ + A+ +S P
Sbjct: 77 EGMLSQARKKAEKRGLNFDLRIEDAESLSLEDETFDIVVSNAVL-------WSLP 124
>gi|239917256|ref|YP_002956814.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
2665]
gi|281414266|ref|ZP_06246008.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
2665]
gi|239838463|gb|ACS30260.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
2665]
Length = 211
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P ++D+G+G G + +++ E V +E ++ R
Sbjct: 56 SAVPAPPATGRFLDVGAGWGPIALTLALRSPEAE---VTAVEVNDRSLQLTRDNAAALGL 112
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
G V A R ++ P+ D+I +
Sbjct: 113 -GNVVALRPEDVPEGAE-FDLIWS 134
>gi|302658633|ref|XP_003021018.1| filamentation protein (Rhf1), putative [Trichophyton verrucosum HKI
0517]
gi|291184893|gb|EFE40400.1| filamentation protein (Rhf1), putative [Trichophyton verrucosum HKI
0517]
Length = 1733
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 12/98 (12%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGG-----FPGIITSIQLSSIEGGLVNLIESKNK 109
RH D V + +D+GSG G P + +I + G IE
Sbjct: 258 LTRHEFD--AVLKAVESNKEVLDIGSGHGETNLLAPELPVAIA---KQLGKAYAIEPNGD 312
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + + ++ ++ P D A
Sbjct: 313 RNEVL--INNSAQSSVEIRQGTAEKLPFEDNKFDAAVA 348
>gi|56965631|ref|YP_177365.1| methylase, polypeptide chain release factor [Bacillus clausii
KSM-K16]
gi|56911877|dbj|BAD66404.1| methylase [Bacillus clausii KSM-K16]
Length = 288
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +L P P +D+G+G G + ++ V + K R Q+
Sbjct: 103 LVLNKLKPGPQAILDVGTGSGAIALTLKLERPDCH---VTATDISEKALDVARENAQRLG 159
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A + AP DVI +
Sbjct: 160 ADITFAKGDL-LAPVAGAVFDVIVS 183
>gi|309812205|ref|ZP_07705963.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Dermacoccus sp. Ellin185]
gi|308433892|gb|EFP57766.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Dermacoccus sp. Ellin185]
Length = 483
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P+ +DL +G G + + +E V L E A++ ++
Sbjct: 106 AALEAAPHGGRIVDLCTGSGAIALAIKAERPDLEVYAVELSEE---AAAWAALNCKQIGL 162
Query: 124 RGKVFACRIQEA-PQMITTCDVISA 147
+ ++A P++ + DV+ +
Sbjct: 163 TVNLSVEDARQALPELEGSFDVVVS 187
>gi|220920157|ref|YP_002495458.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
nodulans ORS 2060]
gi|254789992|sp|B8IUB0|UBIG_METNO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|219944763|gb|ACL55155.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
nodulans ORS 2060]
Length = 249
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Query: 42 KINLVSSSTVEDFWIRHVE-DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+ N V + + D RH D R L ID+G GGG + G
Sbjct: 36 RFNPVRITYIRDTVCRHFGRDPRRPLPL--EALSLIDIGCGGGILSEPLARL-----GAT 88
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++ + + I+ + DV+ A
Sbjct: 89 VTGLDPAPTNIRVAQAHAAEAGVPVDYRGQTIEAVVEAGERFDVVLA 135
>gi|302505731|ref|XP_003014572.1| hypothetical protein ARB_07134 [Arthroderma benhamiae CBS 112371]
gi|291178393|gb|EFE34183.1| hypothetical protein ARB_07134 [Arthroderma benhamiae CBS 112371]
Length = 517
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 30/98 (30%), Gaps = 12/98 (12%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGG-----FPGIITSIQLSSIEGGLVNLIESKNK 109
RH D V + +D+GSG G P + +I + G IE
Sbjct: 258 LTRHEFD--AVLKAVESNKEVLDIGSGHGETNLLAPELPVAIA---KQLGKAYAIEPNGD 312
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + ++ ++ P D A
Sbjct: 313 RNEVLTN--NSAQSSVEIRQGTAEKLPFEDNKFDAAVA 348
>gi|301155995|emb|CBW15465.1| 16S rRNA m2G1207 methylase [Haemophilus parainfluenzae T3T1]
Length = 330
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 17/96 (17%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G G G G S+ V + + R + + G+V A
Sbjct: 189 PIQGKVLDVGCGAGVIG---SMIKKHHPKADVTMTDIHAMAIQSARQTLAENQLEGRVIA 245
Query: 130 CRIQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ +L
Sbjct: 246 SDV--FSHIEGKFDLIISNPPFHDGVDTAYRAVKEL 279
>gi|301063907|ref|ZP_07204382.1| methyltransferase domain protein [delta proteobacterium NaphS2]
gi|300441982|gb|EFK06272.1| methyltransferase domain protein [delta proteobacterium NaphS2]
Length = 365
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 36/102 (35%), Gaps = 10/102 (9%)
Query: 53 DFWIRHVEDSLR---VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ S+ + + D+G G G ++ + +++ + +
Sbjct: 158 QVLVSQFLPSVEHGEMVKRLEQGISVCDMGCGEGVALMVMAEAFPKSRFIGIDISDGVIE 217
Query: 110 KASFLRYVVQKTAARGKVFACR----IQEAPQMITTCDVISA 147
KA R V ++ + F R + E ++ T D ++A
Sbjct: 218 KA---RSVAEEKGFQNVSFQKRDAALLTEDRKLHDTFDYVTA 256
>gi|167751821|ref|ZP_02423948.1| hypothetical protein ALIPUT_00063 [Alistipes putredinis DSM 17216]
gi|167660062|gb|EDS04192.1| hypothetical protein ALIPUT_00063 [Alistipes putredinis DSM 17216]
Length = 282
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 5/80 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G+G G + + + G V ++ K S R ++ A
Sbjct: 109 PDNPAVLDVGTGSGCIAVTLARLIP---GARVTAVDISEKALSIARENARRLDAEVDFRQ 165
Query: 130 CRI--QEAPQMITTCDVISA 147
+ P D+I +
Sbjct: 166 GDALGELFPGQREQFDLIVS 185
>gi|168041582|ref|XP_001773270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675465|gb|EDQ61960.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 400
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFA 129
+ +D+G G G I + + G LV+ +++ R VV+ V
Sbjct: 79 DKVVMDVGCGTGILSIFCAYAGARKAGSLVHAVDASAIAVQA-REVVKANNLSDVITVHH 137
Query: 130 CRIQEAPQMITTCDVISA 147
R+++ Q+ DVI +
Sbjct: 138 GRVEDL-QIFEEVDVIVS 154
>gi|182678976|ref|YP_001833122.1| ubiquinone biosynthesis O-methyltransferase [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182634859|gb|ACB95633.1| ubiquinone biosynthesis O-methyltransferase [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 253
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 16/118 (13%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
F RH L+ +D+G G G + G + I+
Sbjct: 60 QFRDRHAAHPLQ-------GLRLLDIGCGAGLLSEPLARL-----GASMTAIDPAPHNIE 107
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVI----SARALADLDTLLEYSFPWLYQ 166
R + + R+++ D + +AD+ L+Y+ +
Sbjct: 108 VARAHAETSGLAIDYRCMRVEDLDPAAECFDAVLTMEVLEHVADVPAFLKYAADLVRP 165
>gi|150403386|ref|YP_001330680.1| type 11 methyltransferase [Methanococcus maripaludis C7]
gi|150034416|gb|ABR66529.1| Methyltransferase type 11 [Methanococcus maripaludis C7]
Length = 280
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 13/93 (13%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ DSL + S +D+GSG G + + V +E + A +
Sbjct: 56 IIDSLPLSP----DSRVLDIGSGPGTIAVPVA-----GRVKHVTAVEPSHGMADVMEEYA 106
Query: 119 QKTAARG-KVFACRIQEA---PQMITTCDVISA 147
+ + R +E + D++ A
Sbjct: 107 AENGVSNLDIVRKRWEELDPSSDLQGPYDIVFA 139
>gi|254429562|ref|ZP_05043269.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
gi|196195731|gb|EDX90690.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
Length = 275
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 5/79 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G G+ ++ LV+L E+ + A+ + A
Sbjct: 107 VPAEARVVDLGTGTGAIGVSLALARPDWHVTLVDLSEAALQVAA---DNAHRLGAAVTCL 163
Query: 129 ACRIQEAPQMITTCDVISA 147
D+I +
Sbjct: 164 QGSW--LSPCPGPFDLIVS 180
>gi|156741118|ref|YP_001431247.1| methyltransferase small [Roseiflexus castenholzii DSM 13941]
gi|156232446|gb|ABU57229.1| methyltransferase small [Roseiflexus castenholzii DSM 13941]
Length = 198
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG G G GI+ + V L++ + R+
Sbjct: 55 PQTILDLGCGCGVIGIVLARWFPQAR---VILVDRDLLAVRYARHNAALNQTPNVEVIGS 111
Query: 132 IQEAPQMITTCDVISA 147
+ D+I +
Sbjct: 112 VGFEYVPDIPFDLIVS 127
>gi|126177984|ref|YP_001045949.1| methyltransferase type 11 [Methanoculleus marisnigri JR1]
gi|125860778|gb|ABN55967.1| Methyltransferase type 11 [Methanoculleus marisnigri JR1]
Length = 288
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 25/84 (29%), Gaps = 9/84 (10%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P + +D+G G G + + + V ++ + LR Q R
Sbjct: 65 FSPEGARVLDIGCGPGTLSLPLARAGAD-----VTALDISTRMLDHLRETAQNEGLRVNA 119
Query: 128 FACRI----QEAPQMITTCDVISA 147
C + D++ A
Sbjct: 120 VECSWWSADIDRLGFREKFDLVIA 143
>gi|269839612|ref|YP_003324304.1| methyltransferase type 11 [Thermobaculum terrenum ATCC BAA-798]
gi|269791342|gb|ACZ43482.1| Methyltransferase type 11 [Thermobaculum terrenum ATCC BAA-798]
Length = 262
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 20/115 (17%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS---IEGGLVNLIESKNKKAS 112
+RH LR+ + +D+G+G G + ++ + ++ V + + +
Sbjct: 98 LRHRYTLLRLADVR-AGDKVLDVGTGLGLLAVAAAMLGADVVALDMWSVWDLSGNGR--A 154
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA--------------RALADL 153
L ++ + +V + P +T D + + RA+A++
Sbjct: 155 GLERNAREEGVQLRVVEGDARSLPFPDSTFDAVVSNFVVHNIRGREDRKRAVAEM 209
>gi|256005297|ref|ZP_05430263.1| methyltransferase small [Clostridium thermocellum DSM 2360]
gi|255990733|gb|EEU00849.1| methyltransferase small [Clostridium thermocellum DSM 2360]
gi|316939532|gb|ADU73566.1| methyltransferase small [Clostridium thermocellum DSM 1313]
Length = 196
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 8/91 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G G G GI ++ S V +I+ + +
Sbjct: 47 LLIRSVPPLDGSILDIGCGYGVIGISLALLNPS---SFVTMIDINERAVDLASQNIHLNG 103
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
A + D I + RA
Sbjct: 104 VTNAT-ALTSDGFSNVSDKFDAIVSNPPIRA 133
>gi|125975416|ref|YP_001039326.1| methyltransferase small [Clostridium thermocellum ATCC 27405]
gi|281419377|ref|ZP_06250392.1| methyltransferase [Clostridium thermocellum JW20]
gi|125715641|gb|ABN54133.1| 16S rRNA m(2)G 1207 methyltransferase [Clostridium thermocellum
ATCC 27405]
gi|281406997|gb|EFB37260.1| methyltransferase [Clostridium thermocellum JW20]
Length = 196
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 8/91 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G G G GI ++ S V +I+ + +
Sbjct: 47 LLIRSVPPLDGSILDIGCGYGVIGISLALLNPS---SFVTMIDINERAVDLASQNIHLNG 103
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
A + D I + RA
Sbjct: 104 VTNAT-ALTSDGFSNVSDKFDAIVSNPPIRA 133
>gi|302337888|ref|YP_003803094.1| methyltransferase type 11 [Spirochaeta smaragdinae DSM 11293]
gi|301635073|gb|ADK80500.1| Methyltransferase type 11 [Spirochaeta smaragdinae DSM 11293]
Length = 249
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 31/95 (32%), Gaps = 12/95 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P + +D+G+G GF ++ + +G + ++ +
Sbjct: 43 IPPDRAEILDVGAGTGFLSLLLA-----QKGHSITALDLTREMLDKAWEKAASLNLNLNF 97
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P + D + +R L ++ P
Sbjct: 98 VIGDAENLPFESESFDFVVSR-------WLLWTLP 125
>gi|88601538|ref|YP_501716.1| hypothetical protein Mhun_0225 [Methanospirillum hungatei JF-1]
gi|88187000|gb|ABD39997.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
Length = 294
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 5/102 (4%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV--NLIE 105
E+ ++ + D + + S +D+G+G G I + + + +++
Sbjct: 51 PQEKEEARLKRILDLIISTGIDIKGSQVLDIGAGTGSLSIPLAHMGAHVTALDFSDEMLK 110
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
NK+A +Q + D++ A
Sbjct: 111 KLNKRADEENVTIQTILKSWDTINP---DEEGFRKKFDLVIA 149
>gi|85858414|ref|YP_460616.1| ribosomal protein L11 methyltransferase [Syntrophus aciditrophicus
SB]
gi|85721505|gb|ABC76448.1| ribosomal protein L11 methyltransferase [Syntrophus aciditrophicus
SB]
Length = 319
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V + L + + P P +D+G+G G I I + + V ++ K + +
Sbjct: 167 VLEDLILTRRSPEPLNVLDVGTGTG----ILGIASAKLGAERVLCVDIDPKATEIAKENI 222
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+V + R +E + T ++I A
Sbjct: 223 AINHVEDRV-SVRQEEISTLKGTYNLIVA 250
>gi|313680172|ref|YP_004057911.1| 16S rRNA m(2)g 1207 methyltransferase [Oceanithermus profundus DSM
14977]
gi|313152887|gb|ADR36738.1| 16S rRNA m(2)G 1207 methyltransferase [Oceanithermus profundus DSM
14977]
Length = 371
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 65 VFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + P + +DLG+G G + + EG V L+E + R +
Sbjct: 221 LLEHLPADVEGARVLDLGAGYGALSLPLA-----CEGAQVTLLEHQLASVESARRSFRAA 275
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
V + EA Q D++ +
Sbjct: 276 GRSAAVHHSDVDEALQENEVYDIVVS 301
>gi|21226994|ref|NP_632916.1| putative methyltransferase [Methanosarcina mazei Go1]
gi|20905311|gb|AAM30588.1| putative methyltransferase [Methanosarcina mazei Go1]
Length = 274
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
Query: 50 TVED--FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI--EGGLVNLIE 105
E+ W + E+SL + +D+G+G GF ++ + + E ++L E
Sbjct: 50 DEEERAVWKQIFENSLASGKRL----KVLDVGTGTGF----LALLFAEMGHEVSGIDLSE 101
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+KA R+ +F + P + D++
Sbjct: 102 GMLEKA---RHNADNMGLEISLFHGDAENLPFEDCSFDLVV 139
>gi|88601530|ref|YP_501708.1| UbiE/COQ5 methyltransferase [Methanospirillum hungatei JF-1]
gi|88186992|gb|ABD39989.1| UbiE/COQ5 methyltransferase [Methanospirillum hungatei JF-1]
Length = 255
Score = 42.8 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 35/113 (30%), Gaps = 15/113 (13%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ WI +V P +D+G G G G+I + G V ++ K
Sbjct: 33 DEKKLWIHAFA---KVLPEGNKPLSVLDVGCGTGAIGLIFAEM-----GHQVTGLDLSEK 84
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R ++ A + P DV+ R L ++ P
Sbjct: 85 MMDEGRKKTKERALSMTFLHGDAENPPFPDNHFDVVINR-------HLLWTLP 130
>gi|254852933|ref|ZP_05242281.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL R2-503]
gi|300764344|ref|ZP_07074338.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL N1-017]
gi|258606271|gb|EEW18879.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL R2-503]
gi|300514996|gb|EFK42049.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL N1-017]
Length = 189
Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE + ++ K
Sbjct: 22 SIDLLNLDDTSKKLLDVGAGTGSVGLQVACNFPEIQ---VTAIERNSDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 79 GLENVTVVEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 120
>gi|330508464|ref|YP_004384892.1| methyltransferase domain-containing protein [Methanosaeta concilii
GP-6]
gi|328929272|gb|AEB69074.1| methyltransferase domain protein [Methanosaeta concilii GP-6]
Length = 297
Score = 42.8 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 9/81 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
S +D+G+G G I + + V +E + S +R + + +
Sbjct: 65 EKSRVLDIGAGPGTLAIPLA-----QKATHVTAVEPADGMCSVMREKMAEYGVENITIVQ 119
Query: 130 CRIQE---APQMITTCDVISA 147
R +E A + DV+ A
Sbjct: 120 KRWEEVDVARDLDPPYDVVVA 140
>gi|241202921|ref|YP_002974017.1| methyltransferase type 11 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856811|gb|ACS54478.1| Methyltransferase type 11 [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 281
Score = 42.8 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 16/106 (15%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWI------------DLGSGGGFPGIITSIQLSSIEGGLVN 102
W + DSL + L P+ + D+ +G G PG+ + + + +
Sbjct: 23 WKK--WDSLVLSWLAPFGDAMLRRANLSNGFNVLDIAAGTGEPGLTAAAAIPEGHVVVTD 80
Query: 103 LIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
L E+ + ++ + C P + D + R
Sbjct: 81 LSENML--TAAAENAARRGLKNFETRLCDAGTLPFADASFDAVLCR 124
>gi|86149082|ref|ZP_01067314.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88596908|ref|ZP_01100144.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|85840440|gb|EAQ57697.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190597|gb|EAQ94570.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|284925763|gb|ADC28115.1| putative methyltransferase domain protein [Campylobacter jejuni
subsp. jejuni IA3902]
Length = 233
Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + I D+G+G G GI+ +I ++LI+ + + +
Sbjct: 19 DSLILADFILKQGIKGAVFDVGAGCGIIGILLK---KNIANLSLSLIDIQKENIKLIEKN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ +G +F + Q+I D I
Sbjct: 76 LKSNKIQGDIFHDDFNQF-QIIKKFDFIVC 104
>gi|94970294|ref|YP_592342.1| methyltransferase type 11 [Candidatus Koribacter versatilis
Ellin345]
gi|94552344|gb|ABF42268.1| Methyltransferase type 11 [Candidatus Koribacter versatilis
Ellin345]
Length = 305
Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 19/129 (14%)
Query: 27 EKLEYFYFLFLKWSKKINL------VSSS----TVEDFWIRHVEDSLRVFQLHPYPSIWI 76
+ L W NL + + +H+E R + +
Sbjct: 58 DLLSRRIEELGDW--FHNLDLHGIATAPNHFLGDFPRVKWKHIE---RAIPRDLEGASVL 112
Query: 77 DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP 136
D+G GGF SIQ+ G V I+ ++ + R+ + + + +
Sbjct: 113 DIGCNGGF----YSIQMKQRGAGRVLGIDVDDRYLNQARFAAETLNLDIEFEKRSVYDVE 168
Query: 137 QMITTCDVI 145
++ D +
Sbjct: 169 KIEGQFDYV 177
>gi|170747733|ref|YP_001753993.1| methyltransferase type 11 [Methylobacterium radiotolerans JCM 2831]
gi|170654255|gb|ACB23310.1| Methyltransferase type 11 [Methylobacterium radiotolerans JCM 2831]
Length = 257
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 13/111 (11%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
W R D+L +D+G GGF +I + V ++S ++ +
Sbjct: 42 WRR-FADAL---PADLTGKSVLDIGCNGGF----YAIAMKRRGAARVLGLDSDDRYLAQA 93
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
R+ + + + + + DV+ + L P L
Sbjct: 94 RFAAARLGHDIEFRNLSVYDVGALGERFDVVLF-----MGVLYHLRHPLLA 139
>gi|86151537|ref|ZP_01069751.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|205355356|ref|ZP_03222127.1| hypothetical protein Cj8421_0496 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|315124025|ref|YP_004066029.1| hypothetical protein ICDCCJ07001_447 [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841166|gb|EAQ58414.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|205346590|gb|EDZ33222.1| hypothetical protein Cj8421_0496 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|315017747|gb|ADT65840.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 233
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + I D+G+G G GI+ +I ++LI+ + + +
Sbjct: 19 DSLILADFILKQGIKGAVFDVGAGCGIIGILLK---KNIANLSLSLIDIQKENIKLIEKN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ +G +F + Q+I D I
Sbjct: 76 LKSNKIQGDIFHDDFNQF-QIIKKFDFIVC 104
>gi|169830661|ref|YP_001716643.1| ribosomal L11 methyltransferase [Candidatus Desulforudis
audaxviator MP104C]
gi|169637505|gb|ACA59011.1| ribosomal L11 methyltransferase [Candidatus Desulforudis
audaxviator MP104C]
Length = 292
Score = 42.4 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + + +D+G+G G I ++ + + G V I+ R V + +
Sbjct: 149 LERYLARGARVLDVGTGSG----ILAVAAAKLGAGRVCAIDKDPVAIKAARETVAQNNLQ 204
Query: 125 GKVFACRIQEAPQMITTCDVISARALADL-DTLLEYSFP 162
G++ Q+ CD++ +A+L LLE P
Sbjct: 205 GRITIIEGNLLDQVTEKCDLL----VANLHPHLLEELIP 239
>gi|283954225|ref|ZP_06371749.1| hypothetical protein C414_000090016 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794243|gb|EFC32988.1| hypothetical protein C414_000090016 [Campylobacter jejuni subsp.
jejuni 414]
Length = 233
Score = 42.4 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + I D+G+G G GI+ +I ++LI+ + + +
Sbjct: 19 DSLILADFVLKQGIKGAVFDVGAGCGIIGILLK---KNITNLSLSLIDIQKENIELIEKN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ + +F E Q + D I
Sbjct: 76 LKANQIQADIFHGDFNEF-QSVQKFDFIVC 104
>gi|83859688|ref|ZP_00953208.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicaulis alexandrii
HTCC2633]
gi|83852047|gb|EAP89901.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicaulis alexandrii
HTCC2633]
Length = 256
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 30/173 (17%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFL----------FLKWSKKINLVSSSTVEDFWIRHVE 60
A L+T ++ E +EK K++ L RH
Sbjct: 5 EAPTALSTPSIDPEEVEKFSRIAGEWWDPKSKFAPLHKFNPAR-LTYIRD---ILSRHF- 59
Query: 61 DSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ P +D+G GGG + +S+ G V+ E+ K A +
Sbjct: 60 ---KTEGAEPLKGLKVLDIGCGGGLVSEPIARLGASVTG--VDAAEANIKTALVH---AE 111
Query: 120 KTAARGKVFACRIQEAPQM--ITTCDVI----SARALADLDTLLEYSFPWLYQ 166
+ ++ + DV+ +A+ D L +
Sbjct: 112 ENGLSIDYRHGTAEQLLEDGGPEQFDVVLNLEVVEHVANPDQFLRNCARMVKP 164
>gi|298292691|ref|YP_003694630.1| ubiquinone biosynthesis O-methyltransferase [Starkeya novella DSM
506]
gi|296929202|gb|ADH90011.1| ubiquinone biosynthesis O-methyltransferase [Starkeya novella DSM
506]
Length = 247
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 17/128 (13%)
Query: 30 EYFYFLFLKW-SK--------KINLVSSSTVEDFWIRHV-EDSLRVFQLHPYPSIWIDLG 79
E F L +W + K N V + + + + H D + L +D+G
Sbjct: 14 ERFAALAAEWWNPRGKMKVLHKFNPVRLAYLRERIVAHFGLDPKAIRPL--EGLSLLDIG 71
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
GGG + G V I+ + ++++ A +
Sbjct: 72 CGGGLLSEPLARM-----GASVTGIDPAERNVRIASLHAEESSIPVTYRATTAEALANEG 126
Query: 140 TTCDVISA 147
DV+ A
Sbjct: 127 ARFDVVMA 134
>gi|288905339|ref|YP_003430561.1| hypothetical protein GALLO_1138 [Streptococcus gallolyticus UCN34]
gi|325978326|ref|YP_004288042.1| ribosomal RNA small subunit methyltransferase C [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|288732065|emb|CBI13630.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
gi|325178254|emb|CBZ48298.1| ribosomal RNA small subunit methyltransferase C [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 197
Score = 42.4 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+DLG G G I L+ ++G +++ N+ + +K +F
Sbjct: 55 FEKGKTLLDLGCGYG----PLGISLAKVQGVQATMVDINNRAIDLAQKNAEKNGVTANIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I ++ T D I + RA
Sbjct: 111 QSNI--YEKVTGTFDYIISNPPIRA 133
>gi|260589000|ref|ZP_05854913.1| SmtA protein [Blautia hansenii DSM 20583]
gi|260540779|gb|EEX21348.1| SmtA protein [Blautia hansenii DSM 20583]
Length = 564
Score = 42.4 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 13/99 (13%)
Query: 65 VFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ Q P +D+G G GF I+ + +G V ++ + + + + A
Sbjct: 362 ILQYVPKKKLKILDVGCGSGFFTILMA-----QQGHEVIGVDLTADMITRAKELAAEEKA 416
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ D++ +R +L ++ P
Sbjct: 417 DCTFQVMDAENLEFADEAFDMVISR---NLT----WTLP 448
>gi|296131300|ref|YP_003638550.1| Methyltransferase type 11 [Cellulomonas flavigena DSM 20109]
gi|296023115|gb|ADG76351.1| Methyltransferase type 11 [Cellulomonas flavigena DSM 20109]
Length = 187
Score = 42.4 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--V 127
P +D+GSG G + + + V+ ++ + + R V+ + G+ V
Sbjct: 34 PQGGRVLDVGSGPGALVRTLARRRPDLR---VDGLDVTPQMVAHARGVLARAGLAGRTAV 90
Query: 128 FACRIQEAPQMITTCDVISA 147
P + DV+ +
Sbjct: 91 TVGDAAAMPFADASFDVVVS 110
>gi|57238300|ref|YP_178619.1| hypothetical protein CJE0603 [Campylobacter jejuni RM1221]
gi|218562150|ref|YP_002343929.1| putative methyltransferase domain protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|57167104|gb|AAW35883.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
gi|112359856|emb|CAL34643.1| putative methyltransferase domain protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|315057914|gb|ADT72243.1| O-methyltransferase, putative [Campylobacter jejuni subsp. jejuni
S3]
gi|315928173|gb|EFV07490.1| methyltransferase domain protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 233
Score = 42.4 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + I D+G+G G GI+ +I ++LI+ + + +
Sbjct: 19 DSLILADFILKQGIKGAVFDVGAGCGIIGILLK---KNIANLSLSLIDIQKENIELIEKN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ +G +F + Q+I D I
Sbjct: 76 LKSNKIQGDIFHDDFNQF-QIIKKFDFIVC 104
>gi|226356993|ref|YP_002786733.1| methylase [Deinococcus deserti VCD115]
gi|226318983|gb|ACO46979.1| putative methylase [Deinococcus deserti VCD115]
Length = 207
Score = 42.0 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D L ++DL G G G+ + G V L+E + L +
Sbjct: 45 LFDLLAARAPVGRFPNFLDLHGGSGAVGLEAA-----SRGYSVTLVEKDARAVRALEHNA 99
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + +V + + D++ +
Sbjct: 100 RTLGLQARVLRADAMSLLPRLGSFDLVFS 128
>gi|312136582|ref|YP_004003919.1| methyltransferase type 11 [Methanothermus fervidus DSM 2088]
gi|311224301|gb|ADP77157.1| Methyltransferase type 11 [Methanothermus fervidus DSM 2088]
Length = 182
Score = 42.0 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 8/102 (7%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+T + + + D L + ++ I ID+G+G GF +I+L+ V I+
Sbjct: 2 TTKKIIYQKLALDILEISKI--NEGICIDVGTGNGF----LAIELAKHSNLKVFAIDISP 55
Query: 109 KKASFLRYVVQKTAARGKVF--ACRIQEAPQMITTCDVISAR 148
K + V K KV + P D++ +R
Sbjct: 56 KMIDIAKKHVAKKKLLKKVIVKHADVHRMPFPTNFADLVVSR 97
>gi|159900494|ref|YP_001546741.1| type 12 methyltransferase [Herpetosiphon aurantiacus ATCC 23779]
gi|159893533|gb|ABX06613.1| Methyltransferase type 12 [Herpetosiphon aurantiacus ATCC 23779]
Length = 235
Score = 42.0 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P +D+G G G + +L +++ L++L S ++A + V T
Sbjct: 43 AAAATTPNARHVLDIGCGAGNYSLRVLQELPNLDVTLIDLSSSMLERAQ--QRVGAATTG 100
Query: 124 RGKVFACRIQEAPQMITTCDVISARAL 150
+ +++ D+I A A+
Sbjct: 101 KVTALQGDVRQLELGSEQVDIIVAAAV 127
>gi|312136784|ref|YP_004004121.1| methyltransferase type 11 [Methanothermus fervidus DSM 2088]
gi|311224503|gb|ADP77359.1| Methyltransferase type 11 [Methanothermus fervidus DSM 2088]
Length = 260
Score = 42.0 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 21/108 (19%)
Query: 65 VFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ ++ P +D+G+G GF +I L+ + G V I+ ++ L ++
Sbjct: 40 LKKVLPEEDNLSVLDIGTGTGF----LAIVLAEL-GHSVTAIDVSSRM---LNIAKKRAI 91
Query: 123 ARGKVFACRIQEAPQ----MITTCDVISARALADLDTLLEYSFPWLYQ 166
RG ++++A DV+ +R L + P L +
Sbjct: 92 QRGLNINFKLEDAMNLSDVYSEDFDVVISR-------YLTWCLPDLKK 132
>gi|260583861|ref|ZP_05851609.1| SmtA protein [Granulicatella elegans ATCC 700633]
gi|260158487|gb|EEW93555.1| SmtA protein [Granulicatella elegans ATCC 700633]
Length = 258
Score = 42.0 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA---ARGK 126
+D+G+G GF +I L + + I+ K + +QK + +
Sbjct: 45 NKNLKVLDIGTGPGF----FTIILEELGYTNIMGIDVSEKMLEVAKENIQKYGKKDSSIE 100
Query: 127 VFACRIQEAPQMITTCDVISAR 148
+ Q+ + D+I +R
Sbjct: 101 LIQMDAQKLEFKPESFDIIVSR 122
>gi|228477542|ref|ZP_04062175.1| methyltransferase small domain protein [Streptococcus salivarius
SK126]
gi|228250686|gb|EEK09884.1| methyltransferase small domain protein [Streptococcus salivarius
SK126]
Length = 196
Score = 42.0 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L +D+G G G I L+ ++G +I+ ++ R Q+
Sbjct: 50 LSALDL-EAGKTLLDVGCGYG----PLGISLAKVQGVKATMIDINSRAIDLARQNAQRNK 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F I + + D I + RA
Sbjct: 105 VEATIFQSNI--YENVTGSFDYIISNPPIRA 133
>gi|291518391|emb|CBK73612.1| Methyltransferase domain [Butyrivibrio fibrisolvens 16/4]
Length = 264
Score = 42.0 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 5/79 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ID+G+G GF II + G V + + + ++ A R +
Sbjct: 59 PSEISIIDIGAGPGFISIILAEA-----GYKVTAFDFADTMLEEAKANAKELADRIQFIQ 113
Query: 130 CRIQEAPQMITTCDVISAR 148
+ + DV+ +R
Sbjct: 114 GDAMDTSLAPESYDVVISR 132
>gi|52550154|gb|AAU84003.1| putative methyltransferase [uncultured archaeon GZfos35B7]
Length = 202
Score = 42.0 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
+NL+ ++ + RH+ D + +D+G GGG + S+ S +E +
Sbjct: 24 MNLIHTNQYKKIIQRHIIDKIDTTNHL----SILDVGCGGG---KVISLFSSMLEKSKIY 76
Query: 103 LIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
I+ + V + + G V + + P D+++A
Sbjct: 77 GIDHSVDMVNLSSRVNKAGISDGTVNIVHGNVNKLPYSDDFFDIVTA 123
>gi|283955917|ref|ZP_06373407.1| hypothetical protein C1336_000070063 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792577|gb|EFC31356.1| hypothetical protein C1336_000070063 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 233
Score = 42.0 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + I D+G+G G GI+ +I ++LI+ + + +
Sbjct: 19 DSLILADFILKQGIKGAVFDVGAGCGIIGILLK---KNIANLSLSLIDIQKENIKLIEKN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ +G +F + Q I D I
Sbjct: 76 LKSNQIQGDIFHDDFNQF-QSIKKFDFIVC 104
>gi|226356404|ref|YP_002786144.1| rRNA (guanine-N(2)-)-methyltransferase [Deinococcus deserti VCD115]
gi|226318394|gb|ACO46390.1| putative rRNA (guanine-N(2)-)-methyltransferase [Deinococcus
deserti VCD115]
Length = 402
Score = 42.0 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ L +DLG G G G +++ G V L++ + + +
Sbjct: 256 LVDLQLQGRTVLDLGCGTGLIG-----AWAALRGAHVTLVDGDLLSVRSAQATLVASGLG 310
Query: 125 GKVFACRIQEAPQMITTCDVI 145
G+V + +A T DVI
Sbjct: 311 GEVVHSDV-DAELGDRTFDVI 330
>gi|157414777|ref|YP_001482033.1| hypothetical protein C8J_0457 [Campylobacter jejuni subsp. jejuni
81116]
gi|157385741|gb|ABV52056.1| hypothetical protein C8J_0457 [Campylobacter jejuni subsp. jejuni
81116]
gi|307747415|gb|ADN90685.1| Putative uncharacterized protein [Campylobacter jejuni subsp.
jejuni M1]
gi|315931075|gb|EFV10049.1| methyltransferase small domain protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 233
Score = 42.0 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + I D+G+G G GI+ +I ++LI+ + + +
Sbjct: 19 DSLILADFILKQGIKGAVFDVGAGCGIIGILLK---KNIANLSLSLIDIQKENIKLIEKN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ +G +F + Q I D I
Sbjct: 76 LKSNQIQGDIFHDDFNQF-QSIKKFDFIVC 104
>gi|111020813|ref|YP_703785.1| ubiquinone/menaquinone methyltransferase [Rhodococcus jostii RHA1]
gi|110820343|gb|ABG95627.1| ubiquinone/menaquinone methyltransferase [Rhodococcus jostii RHA1]
Length = 233
Score = 42.0 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 16/114 (14%)
Query: 46 VSSSTVEDFW------------IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQL 93
+ T W RHV D P + +D+GSGG + Q
Sbjct: 17 TAIYTPAHAWMYETIVAPAVYRSRHVIDE-YFLPHLPPNARILDVGSGGALFTNYIADQR 75
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++L E++ K+A+ ++ R + T D + +
Sbjct: 76 PDVHILGLDLSEAQIKRAT---KRMRNYGDRVRFDVGDATRLDFADQTFDGVIS 126
>gi|271970137|ref|YP_003344333.1| hypothetical protein Sros_8959 [Streptosporangium roseum DSM 43021]
gi|270513312|gb|ACZ91590.1| hypothetical protein Sros_8959 [Streptosporangium roseum DSM 43021]
Length = 261
Score = 42.0 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
RV + P +D+G+G G + + L + ++S + L +
Sbjct: 51 ARVAEALPAGGSVLDVGAGTGAASLPLAGSLGEL-----IAVDSSAAMLAELTSRADRLG 105
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
++ R + DV A
Sbjct: 106 VPTRIIRGRWPDVAAETPAADVAIA 130
>gi|254465882|ref|ZP_05079293.1| methyltransferase type 11 [Rhodobacterales bacterium Y4I]
gi|206686790|gb|EDZ47272.1| methyltransferase type 11 [Rhodobacterales bacterium Y4I]
Length = 527
Score = 42.0 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-- 131
+ +LG G GF + + I + ++ + R + Q+ F R
Sbjct: 46 SYCELGCGQGFSANLLAAANPHI---SFHAMDFSPAHIAGARELAQEAGLDNVHFHERSF 102
Query: 132 --IQEAPQMITTCDVI 145
+AP + + D+I
Sbjct: 103 ADFGQAPDLPDSFDII 118
>gi|20090994|ref|NP_617069.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Methanosarcina acetivorans C2A]
gi|19916081|gb|AAM05549.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Methanosarcina acetivorans C2A]
Length = 261
Score = 42.0 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 17/113 (15%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
W + + S+ P +D+GSG G I ++ L+ + G V ++
Sbjct: 39 EESQIWKKLLSSSI-----GPDLKNILDVGSGTG----IIAMYLAEL-GYGVTAVDFSEG 88
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R + A+ + I+ T D ++AR + ++ P
Sbjct: 89 MMDIARKKALEKGAKIRFMEGDIENLSFEDETFDCVTARYVL-------WTLP 134
>gi|114642890|ref|XP_001155953.1| PREDICTED: HMT1 hnRNP methyltransferase-like 4 isoform 1 [Pan
troglodytes]
Length = 378
Score = 42.0 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 15/107 (14%)
Query: 51 VEDFWIR--------HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
E+ R H +S+ + + +D+GSG G I S+ + V
Sbjct: 67 PEEMTSRDYYFDSYAHFGNSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVF 122
Query: 103 LIESKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDVISA 147
IE + + + +++ +F +++E + D+I +
Sbjct: 123 GIECSS-ISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVDIIIS 168
>gi|119718090|ref|YP_925055.1| methyltransferase small [Nocardioides sp. JS614]
gi|119538751|gb|ABL83368.1| 16S rRNA m(2)G 1207 methyltransferase [Nocardioides sp. JS614]
Length = 205
Score = 42.0 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ++DLG G G G+ + + + I+ ++ + + G+ A
Sbjct: 57 PVQGRFLDLGCGYGVIGLAIAAAVP---LASITAIDVNDRAIALANENARAMRVDGRFVA 113
Query: 130 CRIQEAPQMITTCDVISA 147
CR ++ P D I +
Sbjct: 114 CRPEQVPTN-EVYDEIWS 130
>gi|221212904|ref|ZP_03585880.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia multivorans CGD1]
gi|221167117|gb|EED99587.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia multivorans CGD1]
Length = 412
Score = 41.6 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S + IES ++ F+ +
Sbjct: 239 LTLARLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIA---IESHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 296 GVPGLQLVAGRAPDALAGLAAPDAI 320
>gi|148655805|ref|YP_001276010.1| type 12 methyltransferase [Roseiflexus sp. RS-1]
gi|148567915|gb|ABQ90060.1| Methyltransferase type 12 [Roseiflexus sp. RS-1]
Length = 535
Score = 41.6 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYP---SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ L+P P +++G G I ++ L I+ ++ + R +++
Sbjct: 34 ATLLGLNPPPVAHCRVLEIGCAAGSNLIPMALSLPE---ATFVGIDLSPRQIADGRRIIE 90
Query: 120 KTAARGKVFACR-IQEAPQMITTCDVISA 147
R +QE + D I A
Sbjct: 91 TLGMTNVTLLVRDVQEVGDELGQFDYIIA 119
>gi|227355032|ref|ZP_03839443.1| methyltransferase [Proteus mirabilis ATCC 29906]
gi|227164819|gb|EEI49666.1| methyltransferase [Proteus mirabilis ATCC 29906]
Length = 259
Score = 41.6 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G+G GF I+ + + G V I++ + + +
Sbjct: 45 LLSHVKEGETLNVLDIGTGPGFFAILLA-----LSGHQVTAIDATSGMLLEAKNNASQHN 99
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR 148
+Q+ P D++ +R
Sbjct: 100 VSINFVCGDVQDLPFGDEQFDLVVSR 125
>gi|306833532|ref|ZP_07466659.1| methyltransferase domain protein [Streptococcus bovis ATCC 700338]
gi|304424302|gb|EFM27441.1| methyltransferase domain protein [Streptococcus bovis ATCC 700338]
Length = 197
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+DLG G G I L+ ++G +++ N+ + +K +F
Sbjct: 55 FEKSKTLLDLGCGYG----PLGISLAKVQGVQATMVDINNRAIDLAQKNAEKNGVTANIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I ++ T D I + RA
Sbjct: 111 QSNI--YEKVSGTFDYIISNPPIRA 133
>gi|254508212|ref|ZP_05120336.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus 16]
gi|219548829|gb|EED25830.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus 16]
Length = 340
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 9/110 (8%)
Query: 41 KKINLVSSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIE 97
K NL ++ + D S + P +D G G G G + + IE
Sbjct: 168 KAHNLT-IKSLPGVFSHGQFDVGSQLLLDTLPALTGKVLDFGCGAGVIGSVMATLNPEIE 226
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + + GKVFA + I +
Sbjct: 227 ---LEMCDISALAVESSKATLAANQLSGKVFASDV--YSDTSDDYQFIVS 271
>gi|23100452|ref|NP_693919.1| protoporphyrinogen oxidase [Oceanobacillus iheyensis HTE831]
gi|22778685|dbj|BAC14953.1| protoporphyrinogen oxidase [Oceanobacillus iheyensis HTE831]
Length = 287
Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 9/131 (6%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWID 77
V + L K E+FY + ++ + L+ E+ + + + + P +D
Sbjct: 66 ETGVPVQHLTKEEHFYGRVFEVNQHV-LIPRPETEELVQQVI----QQAKTMEQPITIVD 120
Query: 78 LGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQEAP 136
+G+G G I +++L G V + K + + Q A ++
Sbjct: 121 VGTGSGVIAITLALELP---GSRVFATDISEKALAVAKRNAQAMKADVTFLEGNFLEPFL 177
Query: 137 QMITTCDVISA 147
+ T D+I +
Sbjct: 178 DINQTADIIVS 188
>gi|161524740|ref|YP_001579752.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Burkholderia
multivorans ATCC 17616]
gi|189350506|ref|YP_001946134.1| precorrin-6Y C5,15-methyltransferase [Burkholderia multivorans ATCC
17616]
gi|160342169|gb|ABX15255.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia multivorans ATCC 17616]
gi|189334528|dbj|BAG43598.1| precorrin-6Y C5,15-methyltransferase [Burkholderia multivorans ATCC
17616]
Length = 412
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S + IES ++ F+ +
Sbjct: 239 LTLARLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIA---IESHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 296 GVPGLQLVAGRAPDALAGLAAPDAI 320
>gi|256545047|ref|ZP_05472414.1| N-6 adenine-specific DNA methylase [Anaerococcus vaginalis ATCC
51170]
gi|256399250|gb|EEU12860.1| N-6 adenine-specific DNA methylase [Anaerococcus vaginalis ATCC
51170]
Length = 233
Score = 41.6 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 53 DFWIRHV-------EDSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ +++HV DS+ + I ID+GSG G + S V
Sbjct: 11 NLYMKHVDKSYSFGIDSILLANFSKMKKNKILIDIGSGSGILSLACSSYY---NLSKVFS 67
Query: 104 IESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVIS 146
IE + +KA+ L+ ++ +V + + CD I
Sbjct: 68 IEIQKEKANLLKENIKLNGINNIEVVNDDLNKVNFPNNFCDYII 111
>gi|168698367|ref|ZP_02730644.1| Methyltransferase type 12 [Gemmata obscuriglobus UQM 2246]
Length = 319
Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P+ +D+G G G + +L ++ L++L +A+ V T
Sbjct: 126 TAAAVTPHARHVLDIGCGAGNYTLKLLERLPGLDATLLDLSRPMLDRAA--ERVGAATTG 183
Query: 124 RGKVFACRIQEAPQMITTCDVISARAL 150
R ++E T DV+ A A+
Sbjct: 184 RVTTLQTDVRETDFPDGTFDVVLAAAV 210
>gi|149194169|ref|ZP_01871267.1| S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE [Caminibacter
mediatlanticus TB-2]
gi|149136122|gb|EDM24600.1| S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE [Caminibacter
mediatlanticus TB-2]
Length = 188
Score = 41.6 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 8/83 (9%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D G G G G+ + + V I++ + +K
Sbjct: 28 IIPHLNGNEKILDFGCGTGLVGLNLAPFVKE-----VIGIDTSKEMVKKFNEKSKKLNLN 82
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
K F I E D++ +
Sbjct: 83 AKAFCKDIFEV---DEKFDIVVS 102
>gi|268679933|ref|YP_003304364.1| methyltransferase small [Sulfurospirillum deleyianum DSM 6946]
gi|268617964|gb|ACZ12329.1| methyltransferase small [Sulfurospirillum deleyianum DSM 6946]
Length = 233
Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Query: 61 DSLRVFQLH---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
D+L ++ +D+G G G G++ ++E V+L++ + K
Sbjct: 16 DTLFLYDFIARLKPKGRVLDVGCGCGILGLLLKRDFPTLE---VHLLDIQAKNCEIAHAN 72
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ F C+ + D I +
Sbjct: 73 ALANHLEMEAFTCKDFLEERFEFKFDFIIS 102
>gi|308183607|ref|YP_003927734.1| hypothetical protein HPPC_07380 [Helicobacter pylori PeCan4]
gi|308065792|gb|ADO07684.1| hypothetical protein HPPC_07380 [Helicobacter pylori PeCan4]
Length = 238
Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDGK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I DVI
Sbjct: 76 KNALKFPNAQVFESDFLDFKPPIL-YDVIVC 105
>gi|251797924|ref|YP_003012655.1| methyltransferase type 12 [Paenibacillus sp. JDR-2]
gi|247545550|gb|ACT02569.1| Methyltransferase type 12 [Paenibacillus sp. JDR-2]
Length = 235
Score = 41.6 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D+ + PY +DLGSG G I + + G V ++ + L+
Sbjct: 39 IMDTFALLD--PYQMRVLDLGSGVGRNAIPIAQAI-KANNGKVTAVDLLPSAVAILQENA 95
Query: 119 QKTAARG--KVFACRIQEAPQMITTCDVISA 147
+K + I+ + D I A
Sbjct: 96 EKYDVINHLEAVVADIEHFQIPAESYDYIIA 126
>gi|221197959|ref|ZP_03571005.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia multivorans CGD2M]
gi|221204483|ref|ZP_03577500.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia multivorans CGD2]
gi|221175340|gb|EEE07770.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia multivorans CGD2]
gi|221181891|gb|EEE14292.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia multivorans CGD2M]
Length = 412
Score = 41.6 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S + IES ++ F+ +
Sbjct: 239 LTLARLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIA---IESHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 296 GVPGLQLVAGRAPDALAGLAAPDAI 320
>gi|171779487|ref|ZP_02920451.1| hypothetical protein STRINF_01332 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282104|gb|EDT47535.1| hypothetical protein STRINF_01332 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 197
Score = 41.6 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
I +DLG G G I L+ ++G +++ N+ + QK +F
Sbjct: 55 FEKGKILLDLGCGYG----PLGISLAKVQGVKPTMVDINNRAIDLAKQNAQKNGVEADIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I ++ T D I + RA
Sbjct: 111 QSDI--YEKVNGTFDYIISNPPIRA 133
>gi|197286777|ref|YP_002152649.1| methyltransferase [Proteus mirabilis HI4320]
gi|194684264|emb|CAR45803.1| probable methyltransferase [Proteus mirabilis HI4320]
Length = 259
Score = 41.6 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 7/86 (8%)
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G+G GF I+ + + G V I++ + +
Sbjct: 45 LLSHVKEGETLKVLDIGTGPGFFAILLA-----LSGHQVTAIDATPGMLLEAKNNASQHN 99
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR 148
+Q+ P D++ +R
Sbjct: 100 VSINFVCGDVQDLPFGDEQFDLVVSR 125
>gi|308062768|gb|ADO04656.1| hypothetical protein HPCU_07580 [Helicobacter pylori Cuz20]
Length = 238
Score = 41.6 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDGK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I DVI
Sbjct: 76 KNALKFPNAQVFESDFLDFKPPIL-YDVIVC 105
>gi|217964736|ref|YP_002350414.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria monocytogenes HCC23]
gi|217334006|gb|ACK39800.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria monocytogenes HCC23]
gi|307570703|emb|CAR83882.1| precorrin-8W decarboxylase [Listeria monocytogenes L99]
Length = 189
Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 13/112 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L+ +D+G+G G G+ + I+ V IE K ++ K
Sbjct: 22 SIDLLNLNETSKKLLDVGAGTGSVGLQVACNFPKIQ---VTAIERKPDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSFPWLYQK 167
T D I +L ++++S L +
Sbjct: 79 GLENVTVIEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSLAHLNPR 126
>gi|306831419|ref|ZP_07464577.1| methyltransferase domain protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426204|gb|EFM29318.1| methyltransferase domain protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 197
Score = 41.6 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +DLG G G I L+ ++G +++ N+ + +K +F
Sbjct: 55 FEKGKMLLDLGCGYG----PLGISLAKVQGVQATMVDINNRAIDLAQKNAEKNGVTANIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I ++ T D I + RA
Sbjct: 111 QSNI--YEKVTGTFDYIISNPPIRA 133
>gi|159037785|ref|YP_001537038.1| methyltransferase type 11 [Salinispora arenicola CNS-205]
gi|157916620|gb|ABV98047.1| Methyltransferase type 11 [Salinispora arenicola CNS-205]
Length = 291
Score = 41.6 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 8/102 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR L P S +D+GSG G P I ++ G V I+ + R
Sbjct: 45 LRAADLRP-GSRVLDVGSGTGEPAISAGRLVA--PTGRVLGIDLAPEMVDRARRCADGLG 101
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR-----ALADLDTLLEY 159
+ ++ + DV+ +R A+ L +
Sbjct: 102 HPIEFVESDVESLDLPADSFDVVFSRWALMFAVDRPRVLTDL 143
>gi|332311581|gb|EGJ24676.1| Precorrin-6B methylase 2 [Listeria monocytogenes str. Scott A]
Length = 177
Score = 41.6 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE ++ K
Sbjct: 10 SIDLLNLDDTSKKLLDVGAGTGSVGLQVACNFPKIQ---VTAIERNPDAVDLIKQNQAKF 66
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 67 GLENVTVIEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 108
>gi|148657852|ref|YP_001278057.1| methyltransferase small [Roseiflexus sp. RS-1]
gi|148569962|gb|ABQ92107.1| methyltransferase small [Roseiflexus sp. RS-1]
Length = 198
Score = 41.6 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 3/78 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +DLG G G GI+ + V L + + R+
Sbjct: 53 DSPQTILDLGCGCGVIGIVLARWFPQAR---VILADRDLLAVRYARHNAALNQTPNVEVI 109
Query: 130 CRIQEAPQMITTCDVISA 147
+ D+I +
Sbjct: 110 GSVGFEHIPALPFDLIVS 127
>gi|282849338|ref|ZP_06258723.1| methyltransferase, FkbM family [Veillonella parvula ATCC 17745]
gi|282581042|gb|EFB86440.1| methyltransferase, FkbM family [Veillonella parvula ATCC 17745]
Length = 276
Score = 41.2 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 15/119 (12%)
Query: 35 LFLKWSKKIN---LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L W K+ N L+ S DF + V + + S +D+G+G G I +
Sbjct: 31 LLEYWDKRANDFSLMRKSNDYDFGRK-VY--AALSSVLNPDSTMLDIGAGPGSFTIPFA- 86
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQEAPQM---ITTCDVIS 146
V IE + L+ ++ +Q+ PQ D+++
Sbjct: 87 ----QHIQSVTAIEPSKGMVAVLKENAKELNVENINIIEELVQDLPQDGSSDFKFDLVT 141
>gi|46907415|ref|YP_013804.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
serotype 4b str. F2365]
gi|47091996|ref|ZP_00229790.1| precorrin-8W decarboxylase [Listeria monocytogenes str. 4b H7858]
gi|226223796|ref|YP_002757903.1| precorrin decarboxylase [Listeria monocytogenes Clip81459]
gi|254823550|ref|ZP_05228551.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL J1-194]
gi|254932926|ref|ZP_05266285.1| precorrin-8W decarboxylase [Listeria monocytogenes HPB2262]
gi|255520282|ref|ZP_05387519.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
FSL J1-175]
gi|46880683|gb|AAT03981.1| precorrin-8W decarboxylase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47019712|gb|EAL10451.1| precorrin-8W decarboxylase [Listeria monocytogenes str. 4b H7858]
gi|225876258|emb|CAS04967.1| Putative precorrin decarboxylase [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|293584481|gb|EFF96513.1| precorrin-8W decarboxylase [Listeria monocytogenes HPB2262]
gi|293592771|gb|EFG00532.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL J1-194]
gi|328466594|gb|EGF37729.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
1816]
gi|328475218|gb|EGF45999.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
220]
Length = 189
Score = 41.2 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE ++ K
Sbjct: 22 SIDLLNLDDTSKKLLDVGAGTGSVGLQVACNFPKIQ---VTAIERNPDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 79 GLENVTVIEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 120
>gi|327300643|ref|XP_003235014.1| hypothetical protein TERG_04066 [Trichophyton rubrum CBS 118892]
gi|326462366|gb|EGD87819.1| hypothetical protein TERG_04066 [Trichophyton rubrum CBS 118892]
Length = 502
Score = 41.2 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 9/93 (9%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D V + +D+GSG G + +I + G IE + L
Sbjct: 258 LTRHEFD--AVLKAVESNKEVLDIGSGHG--ELPVAIA---KQLGKAYAIEPNGDRNEVL 310
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ K+ ++ P D A
Sbjct: 311 TN--NSAQSSVKIRQGTAEKLPFEDNKFDAAVA 341
>gi|288956954|ref|YP_003447295.1| 3-demethylubiquinone-9 3-methyltransferase [Azospirillum sp. B510]
gi|288909262|dbj|BAI70751.1| 3-demethylubiquinone-9 3-methyltransferase [Azospirillum sp. B510]
Length = 260
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 28/103 (27%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L R D L L +D+G GGG + + V +
Sbjct: 54 LTYIRD--SVCKRLGRDPLAPAPLA--GLRVVDIGCGGGLLAEPLARMGAE-----VVGV 104
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ K +T A + T DV+ A
Sbjct: 105 DASEKNIKTAATHAAETGTTVDYRATTAEALAASGETFDVVLA 147
>gi|288930622|ref|YP_003434682.1| methyltransferase type 11 [Ferroglobus placidus DSM 10642]
gi|288892870|gb|ADC64407.1| Methyltransferase type 11 [Ferroglobus placidus DSM 10642]
Length = 246
Score = 41.2 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 34/112 (30%), Gaps = 18/112 (16%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ + W + ++ +D+G+G GF ++ L+ + G V I+ +
Sbjct: 28 LPEVWKE------VLAEIFEDKMRILDVGTGTGF----LAVILAEL-GHEVVGIDISEEM 76
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R R + P D R L ++ P
Sbjct: 77 LKVARRKAVDKGVRIDFRVGDAENLPFDDEEFDAAVCR-----HVL--WTLP 121
>gi|315446765|ref|YP_004079644.1| helicase, type I site-specific restriction-modification system
restriction subunit [Mycobacterium sp. Spyr1]
gi|315265068|gb|ADU01810.1| helicase, type I site-specific restriction-modification system
restriction subunit [Mycobacterium sp. Spyr1]
Length = 1051
Score = 41.2 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 24/157 (15%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+++ + LEK + + L ++ + N + + D ++HV +
Sbjct: 846 DFMSQIIDYGDPELEKKQIYLRLLDRFIQSENYTAPIDLSDVVLKHV-------KQVDRG 898
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLV---NLIESKN-----------KKASFLRYVV 118
I I LG G G+ + + +V +++ N +K SFL ++
Sbjct: 899 RIDIGLGVHVGLSGVTAAGSGEKRDPKMVAFQQVLDRLNDLFGSEDFTQSQKVSFLEALL 958
Query: 119 Q-KTAARGKVFACRIQEAPQMITT--CDVISARALAD 152
+ V ++ A Q + + D A+AD
Sbjct: 959 RTLLDDHALVQQAKVNSAKQFVESPDFDDAVTGAVAD 995
>gi|154151899|ref|YP_001405517.1| methyltransferase type 12 [Candidatus Methanoregula boonei 6A8]
gi|154000451|gb|ABS56874.1| Methyltransferase type 12 [Methanoregula boonei 6A8]
Length = 319
Score = 41.2 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN-KKASFLRYVVQKTAARGKV 127
P + +D+G+G G + + G V +E + + + ++ A +V
Sbjct: 82 VPKGARVLDIGTGPGTYAVPLA-----ARGCRVTAVEPSPVMREALAENMRERNAEDIRV 136
Query: 128 FACRIQE--APQMITTCDVISA 147
R ++ ++ DV+ A
Sbjct: 137 IPKRWEDITVQELGEPFDVVIA 158
>gi|298250535|ref|ZP_06974339.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
gi|297548539|gb|EFH82406.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
Length = 230
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 14/117 (11%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQ 92
Y L L W N++S ++ +H+ D + Q P ++ +D+G G G +I
Sbjct: 30 YDLMLWWQ---NILSRGKWQEL-QQHITD---LAQFQPGEAV-LDVGCGTG----TLAII 77
Query: 93 LSSI--EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
G V+ I+ K+ + R ++ I++ + D++ +
Sbjct: 78 AKQHVGAAGRVSGIDPGLKQITRARSKAERAGLSIDFQVGVIEQLAFADQSFDIVLS 134
>gi|312115448|ref|YP_004013044.1| ubiquinone biosynthesis O-methyltransferase [Rhodomicrobium
vannielii ATCC 17100]
gi|311220577|gb|ADP71945.1| ubiquinone biosynthesis O-methyltransferase [Rhodomicrobium
vannielii ATCC 17100]
Length = 252
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 5/73 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + GG V I+ + R K A ++
Sbjct: 72 VVDIGCGGGILSEPLARL-----GGTVTGIDPVEESVGVARAHAAKLGAPVTYRNVTAED 126
Query: 135 APQMITTCDVISA 147
+ T DV+ A
Sbjct: 127 LAREGLTFDVVVA 139
>gi|262401679|ref|ZP_06078245.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC586]
gi|262352096|gb|EEZ01226.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC586]
Length = 340
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 9/107 (8%)
Query: 43 INLVSSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGG 99
L ++ + D S + P ID+G G G G + + IE
Sbjct: 170 HGLT-IRSLPGVFSHGEFDLGSRLLLDTLPKLDGKVIDIGCGAGVLGCVMATLNPEIE-- 226
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ + + + +Q RG+V+ + T D I
Sbjct: 227 -LEMTDISALAIRSSQETLQANQLRGRVYPSDM--FSDTGTQYDYIV 270
>gi|20092810|ref|NP_618885.1| hypothetical protein MA4016 [Methanosarcina acetivorans C2A]
gi|19918110|gb|AAM07365.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 250
Score = 41.2 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 26/124 (20%)
Query: 50 TVED--FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI--EGGLVNLIE 105
E+ W + E SL + +D+G+G GF ++ + + E ++L E
Sbjct: 26 DEEERTIWKQTFEKSLASGKRL----KVLDVGTGTGF----LALLFAEMGHEVTGIDLSE 77
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS-----------ARALADLD 154
+KA ++ +F + P + D++ +RA+ +
Sbjct: 78 GMLEKA---KHNADNMGIEIDLFHGDAENLPFEDCSFDLVVNKYLLWALEEPSRAVCEWK 134
Query: 155 TLLE 158
+L+
Sbjct: 135 RVLK 138
>gi|71892128|ref|YP_277860.1| N5-glutamine methyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796234|gb|AAZ40985.1| N5-glutamine methyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 278
Score = 41.2 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 12/97 (12%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+ ++HV D L+V L+ +DLG+G G + + + + ++ KKA
Sbjct: 96 ECLVKHVFDLLKVSHLN-----VLDLGTGVGTIALALASERPNWNITGIDC----QKKAL 146
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMI--TTCDVISA 147
FL + K K + + + ++I +
Sbjct: 147 FLAH-KNKLLLNFKNVKFIYGDWFKYLRNKKFNLIVS 182
>gi|312866013|ref|ZP_07726234.1| methyltransferase small domain protein [Streptococcus downei F0415]
gi|311098417|gb|EFQ56640.1| methyltransferase small domain protein [Streptococcus downei F0415]
Length = 196
Score = 41.2 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +DLG G G I L+ ++ V +++ + + ++
Sbjct: 50 LSVLNF-SAGQSLLDLGCGYG----PLGISLAKVQNLKVTMVDINQRALELAQKNAKRNG 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+ I + Q+ D I + RA
Sbjct: 105 VEVDTYQSNIYD--QVKGQFDQIISNPPIRA 133
>gi|20093038|ref|NP_619113.1| phosphatidylethanolamine N-methyltransferase [Methanosarcina
acetivorans C2A]
gi|19918360|gb|AAM07593.1| phosphatidylethanolamine N-methyltransferase [Methanosarcina
acetivorans C2A]
Length = 252
Score = 41.2 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 12/89 (13%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G GF ++ + + G V ++ R + + +F +
Sbjct: 48 KVLDVGTGPGF----LALLFAEM-GHEVTAVDISMGMLEKARNNAKTLGVKVDLFHGDAE 102
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFP 162
+ P D++ + L ++ P
Sbjct: 103 KLPFEDCYFDLVV-------NKYLLWTLP 124
>gi|158335894|ref|YP_001517068.1| methyltransferase [Acaryochloris marina MBIC11017]
gi|158306135|gb|ABW27752.1| methyltransferase, putative [Acaryochloris marina MBIC11017]
Length = 284
Score = 41.2 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 17/116 (14%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI--EGGLVNLIESKNKKAS 112
W + D L + +D+G+G G+ +I + + G V ++
Sbjct: 29 WHPQICDRLLEYARIGAGQTVLDIGTGTGY----LAIASAQRVGDQGHVTGVDISPGMLQ 84
Query: 113 FLRYVVQKTAARGKVF-ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ +Q+ V + DVI L ++FPW+ K
Sbjct: 85 QAQRKIQRLGLSNVVVQRADAEALDYPSHHFDVI----------LCAHTFPWMTDK 130
>gi|313633720|gb|EFS00468.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria seeligeri FSL N1-067]
Length = 187
Score = 41.2 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 13/110 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L+ +D+G+G G G+ + IE V IE + + K
Sbjct: 22 SIDLLGLNSTCRKVLDVGAGTGSVGLQIACAYPEIE---VTAIERNSDAVELINQNKTKF 78
Query: 122 AARGKVFACRIQEAPQMI-TTCDVISARAL-----ADLDTLLEYSFPWLY 165
+ D I +L ++++S L
Sbjct: 79 GLQNIAVIEAYAPVEMPATEQFDAI----FIGGSGGNLTDIIDWSLEHLK 124
>gi|77165697|ref|YP_344222.1| UbiE/COQ5 methyltransferase [Nitrosococcus oceani ATCC 19707]
gi|254434045|ref|ZP_05047553.1| methyltransferase, UbiE/COQ5 family [Nitrosococcus oceani AFC27]
gi|76884011|gb|ABA58692.1| UbiE/COQ5 methyltransferase [Nitrosococcus oceani ATCC 19707]
gi|207090378|gb|EDZ67649.1| methyltransferase, UbiE/COQ5 family [Nitrosococcus oceani AFC27]
Length = 232
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P S +DL G G + + + + V L E K A R VQ+ +
Sbjct: 48 PNASRILDLACGTGISTLAIASRYPGCQVVGVELREEYLKIA---RQKVQRLGLKNIELV 104
Query: 130 CRIQEAPQMITTCDVISA 147
E + D IS+
Sbjct: 105 LSRAEDYRSEEPFDCISS 122
>gi|114320786|ref|YP_742469.1| methyltransferase type 11 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227180|gb|ABI56979.1| Methyltransferase type 11 [Alkalilimnicola ehrlichii MLHE-1]
Length = 409
Score = 41.2 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 14/94 (14%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFAC 130
+D+G+G G +I + + S G V ++ + L + Q V
Sbjct: 76 GDTVLDIGAGAGNDSLIAAGLVGS--AGRVIALDLTPAMTATLYHAAQAGGCDNVAVVQG 133
Query: 131 RIQEAPQMITTCDVISA-----------RALADL 153
+ P + DV+++ RA+A++
Sbjct: 134 SAERLPLSDGSVDVVTSNGALNLVPDKRRAVAEM 167
>gi|255025996|ref|ZP_05297982.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
FSL J2-003]
Length = 189
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE ++ K
Sbjct: 22 SIDLLNLKETSKKLLDVGAGTGSVGLQVACNFPKIQ---VTAIERNPDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 79 GLENVTVIEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 120
>gi|218295159|ref|ZP_03495995.1| methyltransferase small [Thermus aquaticus Y51MC23]
gi|218244362|gb|EED10887.1| methyltransferase small [Thermus aquaticus Y51MC23]
Length = 374
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ ++L +DLG+G G + + + V +E LR +
Sbjct: 219 LLEALVTAVPSLKGRRVLDLGAGYGALTLPLARLGAE-----VTAVEDDLVSVLSLRRSL 273
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVIS 146
++ + + EA D+I
Sbjct: 274 EENGLEARALHSDVDEALTPEERFDIIV 301
>gi|320164868|gb|EFW41767.1| protein arginine N-methyltransferase [Capsaspora owczarzaki ATCC
30864]
Length = 389
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQKTAARGKVFAC 130
D+G+G G I S+ + V IE S K + L + +V
Sbjct: 57 GKAVCDVGAGTG----ILSVFCAQAGARKVYAIEASDMAKQARLIVMENNVQDTVQVIHG 112
Query: 131 RIQEAPQMITTCDVISA 147
R+++ + DVI +
Sbjct: 113 RVEDV-DLPEKVDVIVS 128
>gi|298243473|ref|ZP_06967280.1| ribosomal protein L11 methyltransferase [Ktedonobacter racemifer
DSM 44963]
gi|297556527|gb|EFH90391.1| ribosomal protein L11 methyltransferase [Ktedonobacter racemifer
DSM 44963]
Length = 306
Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKNKKASFLRYVVQKT 121
++ + +D+G+G G I +I + + ++ I+ S +++ + +
Sbjct: 157 QLEKRVTPGMRILDVGTGSG----ILAIAAAKLGAEFIHAIDNSSVATESASENAALNEL 212
Query: 122 AARGKVFACRI--QEAPQMITTCDVISA 147
A R KV + + A QM D++ A
Sbjct: 213 AERVKVELGELTPESAGQMKGQYDIVVA 240
>gi|171911848|ref|ZP_02927318.1| modification methylase, HemK family protein [Verrucomicrobium
spinosum DSM 4136]
Length = 307
Score = 41.2 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 8/96 (8%)
Query: 56 IRHVEDSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ L V + P P +D+G+G G G+ + + E V L++
Sbjct: 98 TEHLVH-LLVDKWFPKSEPPHRLLDVGTGSGCIGLSLAKAWPAAE---VLLVDISEDALE 153
Query: 113 FLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISA 147
R + G+ V R D+I A
Sbjct: 154 LARLNAGRLGLNGQKVRLVRSDLLEHADGAFDLIVA 189
>gi|154247015|ref|YP_001417973.1| ubiquinone biosynthesis O-methyltransferase [Xanthobacter
autotrophicus Py2]
gi|154161100|gb|ABS68316.1| ubiquinone biosynthesis O-methyltransferase [Xanthobacter
autotrophicus Py2]
Length = 247
Score = 41.2 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 31/98 (31%), Gaps = 8/98 (8%)
Query: 51 VEDFWIRHVE-DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ D +RH D+ + L +D+G GGG + GG V I+
Sbjct: 44 LRDALVRHFSRDARALRPL--KGLSILDIGCGGGLLSEPLARM-----GGQVRGIDPAPG 96
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
R + A +E DV+ A
Sbjct: 97 NVEIARAHAAASGLAVDYEAVTAEELASRGDRFDVVVA 134
>gi|313638265|gb|EFS03497.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria seeligeri FSL S4-171]
Length = 189
Score = 40.9 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 13/110 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L+ +D+G+G G G+ + IE V IE + K
Sbjct: 22 SIDLLGLNSTCRKVLDVGAGTGSVGLQIACAYPEIE---VTAIERNPDAVELINQNKTKF 78
Query: 122 AARGKVFACRIQEAPQMI-TTCDVISARAL-----ADLDTLLEYSFPWLY 165
+ D I +L ++++S L
Sbjct: 79 GLQNIAVIEAYAPVEMPATEQFDAI----FIGGSGGNLTDIIDWSLEHLK 124
>gi|289434442|ref|YP_003464314.1| precorrin-8W decarboxylase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170686|emb|CBH27226.1| precorrin-8W decarboxylase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 189
Score = 40.9 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 13/110 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L+ +D+G+G G G+ + IE V IE + K
Sbjct: 22 SIDLLGLNSTCRKVLDVGAGTGSVGLQIACAYPEIE---VTAIERNPDAVELINQNKTKF 78
Query: 122 AARGKVFACRIQEAPQMI-TTCDVISARAL-----ADLDTLLEYSFPWLY 165
+ D I +L ++++S L
Sbjct: 79 GLQNIAVIEAYAPVEMPATEQFDAI----FIGGSGGNLTDIIDWSLEHLK 124
>gi|330961454|gb|EGH61714.1| hypothetical protein PMA4326_23191 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 314
Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
S +D+G G G G++ ++ G V ++ K F V C
Sbjct: 136 SRAVDIGCGTGAGGLLIAVACP---GAHVYAVDINPKALHFAETNAAVAGLHN-VECCPS 191
Query: 133 QEAPQMITTCDVISA 147
+ D+I A
Sbjct: 192 DILSGVTGNFDLIVA 206
>gi|313609225|gb|EFR84894.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria monocytogenes FSL F2-208]
Length = 189
Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE ++ K
Sbjct: 22 SIDLLNLKETSKKLLDVGAGTGSVGLQVACNFPKIQ---VTAIERNPDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 79 GLENVTVIEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 120
>gi|116617901|ref|YP_818272.1| cyclopropane-fatty-acyl-phospholipid synthase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116096748|gb|ABJ61899.1| cyclopropane-fatty-acyl-phospholipid synthase [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 398
Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 45/111 (40%), Gaps = 23/111 (20%)
Query: 37 LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
+W+K +RH+ + L +D+G G G + T+ + ++
Sbjct: 148 AQWNK--------------VRHILNKL----HAQSGETLLDIGCGWGT-LLFTAAKEYNL 188
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
E V L ++ F+ +++ G+V +++ ++ T D +++
Sbjct: 189 EATGVTL---SQQQYDFVSNKIKEEGLEGRVHVY-LEDYRELKDTYDHVTS 235
>gi|213859939|ref|ZP_03385643.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
Length = 245
Score = 40.9 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 58 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 116
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 117 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 170
>gi|171323008|ref|ZP_02911671.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Burkholderia ambifaria MEX-5]
gi|171091608|gb|EDT37196.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Burkholderia ambifaria MEX-5]
Length = 176
Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S + IES ++ F+ +
Sbjct: 4 LTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIA---IESHAERQRFIEHNRDAL 60
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A +T D I
Sbjct: 61 GVPGLQLVAGRAPDALARLTAPDAI 85
>gi|213622584|ref|ZP_03375367.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
Length = 277
Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 90 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 148
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 149 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 202
>gi|213029544|ref|ZP_03343991.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
Length = 229
Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 42 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 100
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 101 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 154
>gi|164687612|ref|ZP_02211640.1| hypothetical protein CLOBAR_01253 [Clostridium bartlettii DSM
16795]
gi|164603386|gb|EDQ96851.1| hypothetical protein CLOBAR_01253 [Clostridium bartlettii DSM
16795]
Length = 247
Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 16/114 (14%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
S W D + +D+G G GF +I S + ++L ES
Sbjct: 33 SDKRQLWQ----DEIIANLPDKEHLKILDVGCGPGFFSVILSSLGHDV--IGIDLTESMI 86
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+KA + QE DV+ +R +L ++ P
Sbjct: 87 QKAD---EIADILDYDIDFRVMNAQELDFDDEEFDVVISR---NLT----WTLP 130
>gi|323492022|ref|ZP_08097187.1| ribosomal RNA small subunit methyltransferase C [Vibrio
brasiliensis LMG 20546]
gi|323313751|gb|EGA66850.1| ribosomal RNA small subunit methyltransferase C [Vibrio
brasiliensis LMG 20546]
Length = 340
Score = 40.9 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 9/106 (8%)
Query: 45 LVSSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
L ++ + D S + P +D G G G G + ++ +IE +
Sbjct: 172 LT-IKSLPGVFSHGEFDIGSKLLLDTLPELKGKVLDFGCGAGVIGSVMALLNPTIE---L 227
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + + G+VFA + D I +
Sbjct: 228 EMCDISALAVASSQATLAANGLTGRVFASDV--YSDTSKDYDYIIS 271
>gi|194444545|ref|YP_002043797.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|226712976|sp|B4T4F9|RSMC_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|194403208|gb|ACF63430.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
Length = 342
Score = 40.9 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA I ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNI--FSEVKGRFDMIIS 267
>gi|145636865|ref|ZP_01792530.1| hypothetical protein CGSHiHH_01252 [Haemophilus influenzae PittHH]
gi|145269946|gb|EDK09884.1| hypothetical protein CGSHiHH_01252 [Haemophilus influenzae PittHH]
Length = 268
Score = 40.9 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKLGLHNLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|148908774|gb|ABR17493.1| unknown [Picea sitchensis]
Length = 315
Score = 40.9 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 14/110 (12%)
Query: 43 INLVSSSTVEDFWIRHVE---DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+N S + +H +S R F+ ID+G GGG S G
Sbjct: 101 MNPTRISFIRSALCQHFRKDPNSSRPFE----GLRIIDVGCGGGLLCEPLSRM-----GA 151
Query: 100 LVNLIESKNKKAS-FLRYVVQK-TAARGKVFACRIQEAPQMITTCDVISA 147
V I++ K + L++ V+ A ++ Q D + +
Sbjct: 152 RVTGIDAVEKNINIALQHAVRDPLTASIDYQCTTAEQLVQEKEHFDAVIS 201
>gi|15805670|ref|NP_294366.1| N-6 adenine-specific DNA restriction methylase [Deinococcus
radiodurans R1]
gi|6458345|gb|AAF10222.1|AE001922_2 N-6 adenine-specific DNA restriction methylase, putative
[Deinococcus radiodurans R1]
Length = 186
Score = 40.9 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 31/104 (29%), Gaps = 17/104 (16%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D L ++DL G G G+ + G V LIE ++ L
Sbjct: 35 LFDLLAARAPAGRFPHFVDLHGGSGAIGLEAA-----SRGYRVTLIEKDSRAVGALERNA 89
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVI------------SARAL 150
+ +VF D+I ARA+
Sbjct: 90 RGLGLNARVFKGDALGQLPRAGQADIIFSDPPYQADIPAVARAV 133
>gi|319942108|ref|ZP_08016426.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
[Sutterella wadsworthensis 3_1_45B]
gi|319804318|gb|EFW01202.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
[Sutterella wadsworthensis 3_1_45B]
Length = 254
Score = 40.9 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 27/118 (22%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+ SG +I + + + + S+ R +++ +V
Sbjct: 71 GMKLLDIASGT----CDLAIAFAHRTNAENITATDINYEMLSYGRQRLEQLGLNCQVIQA 126
Query: 131 RIQEAPQMITTCDVISA-----------RALAD-LDTL--------LEY--SFPWLYQ 166
+ P D ++ RALA+ L L LE+ P L
Sbjct: 127 DAEHLPFEDNAFDRVTVSFGIRNMTHKDRALAEMLRVLKPGGKLLVLEFSKCAPLLKP 184
>gi|224097325|ref|XP_002310910.1| hypothetical protein POPTRDRAFT_832445 [Populus trichocarpa]
gi|222853813|gb|EEE91360.1| hypothetical protein POPTRDRAFT_832445 [Populus trichocarpa]
Length = 258
Score = 40.9 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 13/103 (12%)
Query: 52 EDFWIRHVE-----DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
E+ HV D++ Q + +D+G G G I SI + V +++
Sbjct: 54 EEMIKDHVRTNTYRDAIFHHQSLIEGKVVVDVGCGTG----ILSIFCAQAGAKRVYAVDA 109
Query: 107 KNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVISA 147
+ VV+ + V R+++ ++ DVI +
Sbjct: 110 SDIAVQA-NEVVKANNLSDKVIVLHGRVEDV-EIDEEVDVIIS 150
>gi|153951820|ref|YP_001398473.1| hypothetical protein JJD26997_1439 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939266|gb|ABS44007.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 233
Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + I D+G+G G GI+ +I ++LI+ + + +
Sbjct: 19 DSLILADFILKQGIKGAVFDVGAGCGIVGILLK---KNITNLSLSLIDIQKENIELIEKN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ +G +F + Q + D I
Sbjct: 76 LKSNQIQGDIFHDDFNQF-QSVKKFDFIVC 104
>gi|241518324|ref|YP_002978952.1| Methyltransferase type 11 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240862737|gb|ACS60401.1| Methyltransferase type 11 [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 253
Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF ++++ V I+S + + R+ ++ A
Sbjct: 53 VLPADLSGLSVLDVGCNAGF----YALEMKRRNAARVVGIDSDPRYLAQARFAAEQAGAE 108
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + ++ T D++ + L P L
Sbjct: 109 IEFRQMSVYDVARLGETFDLVIF-----MGVLYHLRHPLLA 144
>gi|294816870|ref|ZP_06775512.1| Methyltransferase type 12 [Streptomyces clavuligerus ATCC 27064]
gi|294321685|gb|EFG03820.1| Methyltransferase type 12 [Streptomyces clavuligerus ATCC 27064]
Length = 342
Score = 40.9 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 18/109 (16%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + L P + +++G+G G + + GG V ++ + + L++
Sbjct: 101 SLSEWAL-PPGARCLEIGAGAGTVALWLA---GRCTGGEVTATDTDIRFMAGLQHPA--- 153
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL--------ADLDTLLEYSFP 162
+V ++ T D+I AR++ A L ++ + P
Sbjct: 154 ---LRVLQHDVRTQGFPEETFDLIVARSVLCHLPEREAVLARMVSWLRP 199
>gi|326202056|ref|ZP_08191926.1| ribosomal protein L11 methyltransferase [Clostridium papyrosolvens
DSM 2782]
gi|325987851|gb|EGD48677.1| ribosomal protein L11 methyltransferase [Clostridium papyrosolvens
DSM 2782]
Length = 316
Score = 40.9 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-- 119
S+ + + + +D+G G G I SI + + V I+ + ++
Sbjct: 165 SILLDKYMKDDTQVLDIGCGTG----ILSIIAAKLGAKTVEAIDIDEVAVKVAKENIELN 220
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++ V+ + + Q D+I A
Sbjct: 221 EETSKVSVYKAILSDLKQEEQKYDIIVA 248
>gi|168822095|ref|ZP_02834095.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205341377|gb|EDZ28141.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
Length = 342
Score = 40.9 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|223949635|gb|ACN28901.1| unknown [Zea mays]
Length = 375
Score = 40.9 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 52 EDFWIRHVEDS-----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
E+ HV S + + + +D+G G G + SI + V +++
Sbjct: 39 EEMLKDHVRTSTYRNAIMHHKDLISGKVVLDVGCGTG----VLSIFCAFAGATRVYAVDA 94
Query: 107 KNKKASFLRYVV---QKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +F + + + + V RI++ + DVI +
Sbjct: 95 SD--IAFQAMEIVRENELSDKVVVLHGRIEDV-DIEEKVDVIIS 135
>gi|226503455|ref|NP_001142360.1| hypothetical protein LOC100274531 [Zea mays]
gi|194708422|gb|ACF88295.1| unknown [Zea mays]
Length = 403
Score = 40.9 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 52 EDFWIRHVEDS-----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
E+ HV S + + + +D+G G G + SI + V +++
Sbjct: 67 EEMLKDHVRTSTYRNAIMHHKDLISGKVVLDVGCGTG----VLSIFCAFAGATRVYAVDA 122
Query: 107 KNKKASFLRYVV---QKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +F + + + + V RI++ + DVI +
Sbjct: 123 SD--IAFQAMEIVRENELSDKVVVLHGRIEDV-DIEEKVDVIIS 163
>gi|307352813|ref|YP_003893864.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
gi|307156046|gb|ADN35426.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
Length = 218
Score = 40.9 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKNKKASFLRYVVQKTAARGKVFA 129
I ID G+G G GI + I G V L++ +N+K + +K R +
Sbjct: 43 EGICIDAGAGSGMLGISLA----KITGLEVVLMDLLPENRKYAEENTRQEKLDDRCRFVQ 98
Query: 130 CRIQEAPQMITTCDVISAR 148
I + P D++ +R
Sbjct: 99 GDITDMPFEDEYADLVISR 117
>gi|320088989|emb|CBY98745.1| 16S rRNA m2G 1207 methylse [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 342
Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|255326353|ref|ZP_05367437.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
gi|255296570|gb|EET75903.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
Length = 207
Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G G G + ++ + V+ ++ ++ S
Sbjct: 57 PQGERMLDIGCGWGPITLTLAMLAPDAQ---VHAVDVNSRSISLTERNAAALGLPNVTVG 113
Query: 130 CRIQEAPQMITTCDVISA 147
P++ D I +
Sbjct: 114 TPESVDPELR--FDTIWS 129
>gi|238910715|ref|ZP_04654552.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|322615721|gb|EFY12641.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322620569|gb|EFY17429.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322621804|gb|EFY18654.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322627529|gb|EFY24320.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322630836|gb|EFY27600.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322637946|gb|EFY34647.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322642216|gb|EFY38824.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322644937|gb|EFY41469.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322651101|gb|EFY47486.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322656643|gb|EFY52931.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658699|gb|EFY54956.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322661859|gb|EFY58075.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322666395|gb|EFY62573.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322672449|gb|EFY68561.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322676243|gb|EFY72314.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322679668|gb|EFY75713.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322684378|gb|EFY80382.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323191860|gb|EFZ77109.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323196669|gb|EFZ81816.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323200938|gb|EFZ86007.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323209335|gb|EFZ94268.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323212978|gb|EFZ97780.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323216721|gb|EGA01446.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323223319|gb|EGA07656.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323226154|gb|EGA10371.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323228807|gb|EGA12936.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323236582|gb|EGA20658.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323239918|gb|EGA23965.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323242035|gb|EGA26064.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323247524|gb|EGA31479.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323250626|gb|EGA34508.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323259355|gb|EGA42997.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323263767|gb|EGA47288.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323265639|gb|EGA49135.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323270084|gb|EGA53532.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
Length = 342
Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|168230199|ref|ZP_02655257.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168234688|ref|ZP_02659746.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194471541|ref|ZP_03077525.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194736271|ref|YP_002117470.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197251566|ref|YP_002149497.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|226712970|sp|B5F512|RSMC_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712979|sp|B4TU29|RSMC_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|194457905|gb|EDX46744.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194711773|gb|ACF90994.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197215269|gb|ACH52666.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197291795|gb|EDY31145.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|205335077|gb|EDZ21841.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
Length = 342
Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|167552222|ref|ZP_02345975.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205323159|gb|EDZ10998.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
Length = 342
Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|56416330|ref|YP_153405.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197365253|ref|YP_002144890.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|81821528|sp|Q5PK16|RSMC_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712978|sp|B5BL07|RSMC_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|56130587|gb|AAV80093.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096730|emb|CAR62353.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 342
Score = 40.9 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|321222476|gb|EFX47548.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
Length = 342
Score = 40.9 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LKSWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|260584234|ref|ZP_05851982.1| methyltransferase [Granulicatella elegans ATCC 700633]
gi|260158860|gb|EEW93928.1| methyltransferase [Granulicatella elegans ATCC 700633]
Length = 202
Score = 40.9 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 14/114 (12%)
Query: 47 SSSTVEDFWIRHVED--SLRVFQLHPYPS-----IWIDLGSGGGFPGIITSIQLSSIEGG 99
S ++ + +H D S + + + P +D+G G G G+ +
Sbjct: 29 SFTSDNGVFSKHTVDFGSELLIESYDVPEQFQKASLLDIGCGYGTMGLAYGKAYPEL--- 85
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
V +I+ + + QK + ++I + RA
Sbjct: 86 SVEMIDVNERAILLAKENAQKNGIHNVDIHESNLYDAVKKSQYEIIISNPPIRA 139
>gi|301168613|emb|CBW28203.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae 10810]
Length = 330
Score = 40.9 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 17/100 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + + + + + + + R + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSMIKKRAPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA------------RALADLDTLLEY 159
+ + D+I + RA+ +L T ++
Sbjct: 248 V--FSDIEEKFDLIISNPPFHDGIDTAYRAVTELITQAKW 285
>gi|193216650|ref|YP_001999892.1| protoporphyrinogen oxidase [Mycoplasma arthritidis 158L3-1]
gi|193001973|gb|ACF07188.1| protoporphyrinogen oxidase [Mycoplasma arthritidis 158L3-1]
Length = 235
Score = 40.9 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +Q S +DLG G GF G+ G V L++ + +
Sbjct: 66 ISSYQYLNKNSKVLDLGCGSGFIGLAIK----KNIGCYVTLVDISKQAIKQSELNAKLNN 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
K+ + DVI +
Sbjct: 122 LDVKIIKSNWFSNVKNDERFDVIVS 146
>gi|200387205|ref|ZP_03213817.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|199604303|gb|EDZ02848.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
Length = 342
Score = 40.9 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|16767797|ref|NP_463412.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|197263702|ref|ZP_03163776.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|198242075|ref|YP_002218430.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|207859682|ref|YP_002246333.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|81853618|sp|Q8ZJW6|RSMC_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712972|sp|B5FTB3|RSMC_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712973|sp|B5R2I6|RSMC_SALEP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|16423121|gb|AAL23371.1| 16S ribosomal rRNA [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|197241957|gb|EDY24577.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197936591|gb|ACH73924.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|206711485|emb|CAR35870.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261249638|emb|CBG27508.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996916|gb|ACY91801.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301161036|emb|CBW20573.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915650|dbj|BAJ39624.1| 16S rRNA methyltransferase C [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323132895|gb|ADX20325.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|326626237|gb|EGE32582.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
gi|332991362|gb|AEF10345.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
Length = 342
Score = 40.5 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|16763351|ref|NP_458968.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|29144829|ref|NP_808171.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|213051998|ref|ZP_03344876.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213419349|ref|ZP_03352415.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
gi|213427560|ref|ZP_03360310.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213650120|ref|ZP_03380173.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|289828938|ref|ZP_06546656.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|81853154|sp|Q8Z0V2|RSMC_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|25513266|pir||AH1071 conserved hypothetical protein STY4906 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505660|emb|CAD03391.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140468|gb|AAO72031.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 342
Score = 40.5 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|290893317|ref|ZP_06556303.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL J2-071]
gi|290557125|gb|EFD90653.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL J2-071]
Length = 189
Score = 40.5 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE ++ K
Sbjct: 22 SIDLLNLKETSKKLLDVGAGTGSVGLQVACNFPKIQ---VTAIERNPDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 79 GLENVAVIEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 120
>gi|218528244|ref|YP_002419060.1| methyltransferase type 11 [Methylobacterium chloromethanicum CM4]
gi|218520547|gb|ACK81132.1| Methyltransferase type 11 [Methylobacterium chloromethanicum CM4]
Length = 262
Score = 40.5 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 9/103 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+D+G GGF SI++ V ++S + + R+ +
Sbjct: 53 ASALPADLTGKSVLDIGCNGGF----YSIEMKRRGASRVLGLDSDERYLAQARFAADRLG 108
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + + DV+ + L P L
Sbjct: 109 HDIEFRNLSVYDVGALAERFDVVLF-----MGVLYHLRHPLLA 146
>gi|156742772|ref|YP_001432901.1| type 12 methyltransferase [Roseiflexus castenholzii DSM 13941]
gi|156234100|gb|ABU58883.1| Methyltransferase type 12 [Roseiflexus castenholzii DSM 13941]
Length = 535
Score = 40.5 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYP---SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ L+P P +++G G + ++ L I+ ++ + R V+
Sbjct: 34 ATLLGLNPPPVARCRVLEIGCAAGANLMPMALSLPK---ASFTGIDLSPRQIADGRRVID 90
Query: 120 KTAARGKVFACR-IQEAPQMITTCDVISA 147
R +Q+ + D I A
Sbjct: 91 TLGLTNITLLARDLQDVGDELGQFDYIIA 119
>gi|73671107|ref|YP_307122.1| hypothetical protein Mbar_A3679 [Methanosarcina barkeri str.
Fusaro]
gi|72398269|gb|AAZ72542.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 244
Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 12/95 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L +++G+G G I + + G V+L E+ +KA+ ++ +
Sbjct: 46 LTDKKIRAVEVGTGPGLLAISLAAMGHDVTG--VDLSENMLEKAA---ENAKEKGVDVSL 100
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
++ P D + L L ++ P
Sbjct: 101 VQGDAEKIPLNDGEYDFV-------LSKYLLWTLP 128
>gi|332878223|ref|ZP_08445951.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332683835|gb|EGJ56704.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 281
Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L P ID+G+G G I + L + E V ++ K R +
Sbjct: 106 LTTVTPTSKPLKIIDIGTGSGCIAISLAKSLPNAE---VTAVDVSAKALQVARRNAELNG 162
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
I + + T D+I +
Sbjct: 163 VTINFLQQDILQTSTLPDTYDIIIS 187
>gi|204927148|ref|ZP_03218350.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|204323813|gb|EDZ09008.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
Length = 342
Score = 40.5 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKVR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|268326447|emb|CBH40035.1| conserved hypothetical protein, SAM-dependent methyltransferase
type 11 family [uncultured archaeon]
Length = 263
Score = 40.5 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 12/95 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+D+G+G GF ++ + G V I+ S + +
Sbjct: 50 FGENRKNVLDVGTGTGFLSLLLADF-----GHEVTGIDMSEGMLSVAKEKAHDMGLKIHF 104
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P T D + R L ++ P
Sbjct: 105 ERGDAENLPFDGQTFDCVVCR-------HLLWTLP 132
>gi|149197630|ref|ZP_01874680.1| hypothetical protein LNTAR_20393 [Lentisphaera araneosa HTCC2155]
gi|149139200|gb|EDM27603.1| hypothetical protein LNTAR_20393 [Lentisphaera araneosa HTCC2155]
Length = 378
Score = 40.5 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 9/80 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSI----QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+DLG G G G+ + GG V L++S + + ++ +
Sbjct: 238 GENILDLGCGAGLIGLALAKRQNDAKPD-HGGSVVLVDSNIRSIECCKKNIEINGFENCE 296
Query: 127 VFACRIQEAPQMITTCDVIS 146
A + + T D+I
Sbjct: 297 AIAS---DLYETEKTFDLIV 313
>gi|134101274|ref|YP_001106935.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Saccharopolyspora erythraea NRRL 2338]
gi|291008861|ref|ZP_06566834.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Saccharopolyspora erythraea NRRL 2338]
gi|133913897|emb|CAM04010.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Saccharopolyspora erythraea NRRL 2338]
Length = 245
Score = 40.5 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G GF S L+ + G V ++ + R ++ C +
Sbjct: 58 VLDVGTGTGF----LSTLLAEL-GHRVTAVDPSATMLGYAREEAERRGVDVSFRECGAHD 112
Query: 135 APQMITTCDVISAR 148
+ +T D+++AR
Sbjct: 113 VEDLASTFDLVTAR 126
>gi|170690482|ref|ZP_02881649.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia graminis C4D1M]
gi|170144917|gb|EDT13078.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia graminis C4D1M]
Length = 416
Score = 40.5 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE+ ++ F+ +
Sbjct: 239 ITLARLAPAPGELLWDVGAGSGSIGIEWMRAHPACRAIA---IEAHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R EA + T D +
Sbjct: 296 GVPGLQLVAGRAPEALDGLPTPDAV 320
>gi|302669461|ref|YP_003829421.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316]
gi|302393934|gb|ADL32839.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316]
Length = 214
Score = 40.5 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L F P +DLG+G G I+ + + ++ E + + E+ + A+ ++
Sbjct: 6 LSGFANAPEGGRCLDLGTGTGIIPILMAAKTNARELIGLEIQEASAEMAN-RSVLLNDLE 64
Query: 123 ARGKVFACRIQEAPQMIT--TCDVISA 147
AR K+ I+EA Q+ + DV+++
Sbjct: 65 ARVKIVQGDIKEADQLFEAASFDVVTS 91
>gi|294673060|ref|YP_003573676.1| UbiE/COQ5 family methyltransferase [Prevotella ruminicola 23]
gi|294472770|gb|ADE82159.1| methyltransferase, UbiE/COQ5 family [Prevotella ruminicola 23]
Length = 203
Score = 40.5 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKT 121
L++ + +D+G GGGF L + V I+ + + R V +
Sbjct: 38 LKLVNVQD-GWTMLDVGCGGGF---TIRRLLKRSKDAQVYGIDISEESVTKARQVNAEVL 93
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+ V ++ P D+++A
Sbjct: 94 DKQVYVTQGSAEQLPYNDEMFDLVTA 119
>gi|260588999|ref|ZP_05854912.1| SmtA protein [Blautia hansenii DSM 20583]
gi|260540778|gb|EEX21347.1| SmtA protein [Blautia hansenii DSM 20583]
Length = 260
Score = 40.5 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G GF II S G + ++S ++ + A + Q
Sbjct: 60 KILDIGTGPGFYSIILS-----KRGYQMTAVDSSEGMLEEAKHNAGELADNIEFLCMDAQ 114
Query: 134 EAPQMITTCDVISAR 148
+ T DVI R
Sbjct: 115 KLDFEDNTFDVIVTR 129
>gi|262276348|ref|ZP_06054157.1| hypothetical adenine-specific methylase yfcB [Grimontia hollisae
CIP 101886]
gi|262220156|gb|EEY71472.1| hypothetical adenine-specific methylase yfcB [Grimontia hollisae
CIP 101886]
Length = 310
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P+ +DL +G G GI + E V+L++ + VQ+ +VF
Sbjct: 132 EPTRIMDLCTGSGCIGIACAYAFPDAE---VDLVDISSDALEVAEMNVQEHGLEQQVFPI 188
Query: 131 RIQEAPQM-ITTCDVISA 147
R + D+I +
Sbjct: 189 RSDLFRDLPKDKYDLIVS 206
>gi|224586377|ref|YP_002640176.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|224470905|gb|ACN48735.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
Length = 342
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKAR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|30685597|ref|NP_188637.2| PRMT6 (PROTEIN ARGININE METHYLTRANSFERASE 6); methyltransferase
[Arabidopsis thaliana]
gi|122165742|sp|Q08A71|ANM6_ARATH RecName: Full=Probable protein arginine N-methyltransferase 6
gi|115311473|gb|ABI93917.1| At3g20020 [Arabidopsis thaliana]
gi|332642799|gb|AEE76320.1| protein arginine N-methyltransferase 6 [Arabidopsis thaliana]
Length = 435
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVF 128
+ +D+G G G I SI + V +++ + + VV+ + V
Sbjct: 118 EGKVVVDVGCGTG----ILSIFCAQAGAKRVYAVDASDIAVQA-KEVVKANGLSDKVIVL 172
Query: 129 ACRIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 173 HGRVEDV-EIDEEVDVIIS 190
>gi|9293956|dbj|BAB01859.1| protein arginine N-methyltransferase-like protein [Arabidopsis
thaliana]
Length = 399
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVF 128
+ +D+G G G I SI + V +++ + + VV+ + V
Sbjct: 118 EGKVVVDVGCGTG----ILSIFCAQAGAKRVYAVDASDIAVQA-KEVVKANGLSDKVIVL 172
Query: 129 ACRIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 173 HGRVEDV-EIDEEVDVIIS 190
>gi|297848734|ref|XP_002892248.1| arginine N-methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338090|gb|EFH68507.1| arginine N-methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 372
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ H +D+G+G G I +I + V +E+ K A R +V+
Sbjct: 55 KHHFEGKTVLDVGTGSG----ILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHI 109
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+V +++ + DVI +
Sbjct: 110 VEVIEGSVEDI-SLPEKVDVIIS 131
>gi|206563136|ref|YP_002233899.1| putative methyltransferase [Burkholderia cenocepacia J2315]
gi|198039176|emb|CAR55140.1| putative methyltransferase [Burkholderia cenocepacia J2315]
Length = 282
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 30/102 (29%), Gaps = 13/102 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +D+G G G + +I I+ + R ++
Sbjct: 40 LAAAAAASSATRVLDVGCGTG--AVTLAIARRLGASTQCTGIDISARMIDAARARADRSG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISA-----------RALADL 153
+ +Q + D+I + RA A+L
Sbjct: 98 LPARFVCADVQTHAFEPASVDLIVSRLGVMFFDDPVRAFANL 139
>gi|16930707|gb|AAL32019.1|AF436837_1 At1g04870/F13M7_12 [Arabidopsis thaliana]
Length = 383
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ H +D+G+G G I +I + V +E+ K A R +V+
Sbjct: 66 KHHFEGKTVLDVGTGSG----ILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHI 120
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+V +++ + DVI +
Sbjct: 121 VEVIEGSVEDI-SLPEKVDVIIS 142
>gi|18390448|ref|NP_563720.1| PRMT10; [myelin basic protein]-arginine N-methyltransferase/
histone-arginine N-methyltransferase/ methyltransferase/
protein-arginine omega-N asymmetric methyltransferase/
protein-arginine omega-N monomethyltransferase
[Arabidopsis thaliana]
gi|75336166|sp|Q9MAT5|ANM42_ARATH RecName: Full=Probable protein arginine N-methyltransferase 4.2
gi|7211979|gb|AAF40450.1|AC004809_8 Similar to protein arginine N-methyltransferase from Rattus
norvegicus gb|U60882. ESTs gb|Z30908 and gb|Z29205 come
from this gene [Arabidopsis thaliana]
gi|22135775|gb|AAM91044.1| At1g04870/F13M7_12 [Arabidopsis thaliana]
gi|332189633|gb|AEE27754.1| putative protein arginine N-methyltransferase 4.2 [Arabidopsis
thaliana]
Length = 383
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ H +D+G+G G I +I + V +E+ K A R +V+
Sbjct: 66 KHHFEGKTVLDVGTGSG----ILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHI 120
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+V +++ + DVI +
Sbjct: 121 VEVIEGSVEDI-SLPEKVDVIIS 142
>gi|322371708|ref|ZP_08046251.1| hypothetical protein ZOD2009_19443 [Haladaptatus paucihalophilus
DX253]
gi|320548593|gb|EFW90264.1| hypothetical protein ZOD2009_19443 [Haladaptatus paucihalophilus
DX253]
Length = 573
Score = 40.5 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 10/99 (10%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-- 125
L P +D+G+G G P + L S + +E + A L ++++T
Sbjct: 159 LLPGKLRVLDVGAGVGGPALGLHDFLPSETFVEYHAVEPSD-AADVLAAMLEETGENFYP 217
Query: 126 KVFACRIQ--EAPQMITTCDVISARALADLDTLLEYSFP 162
V + E D+I A + L E S P
Sbjct: 218 TVHRDTAEAFEPEDGEAEYDLIV---FA--NVLSELSDP 251
>gi|254561604|ref|YP_003068699.1| hypothetical protein METDI3191 [Methylobacterium extorquens DM4]
gi|254268882|emb|CAX24843.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 341
Score = 40.5 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
HP P D+G G G GI+ + +L E V L++ R + +
Sbjct: 156 HPAPRRVADIGCGSGAAGILVAKRLPEAE---VVLVDINPAALRAARINARLAGVDNVRP 212
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + + D+I +
Sbjct: 213 VHSDM--LSSVEGSFDLIVS 230
>gi|222613047|gb|EEE51179.1| hypothetical protein OsJ_31971 [Oryza sativa Japonica Group]
Length = 415
Score = 40.5 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAARGKVFAC 130
+ +D+G G G + SI + V +++ + + V + + + + V
Sbjct: 104 GKVVLDVGCGTG----VLSIFCAFAGAARVYAVDASDIALQAMEIVRENELSDKVIVLHG 159
Query: 131 RIQEAPQMITTCDVISA 147
RI++ ++ DVI +
Sbjct: 160 RIEDV-EIEEKVDVIIS 175
>gi|218184788|gb|EEC67215.1| hypothetical protein OsI_34113 [Oryza sativa Indica Group]
Length = 415
Score = 40.5 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAARGKVFAC 130
+ +D+G G G + SI + V +++ + + V + + + + V
Sbjct: 104 GKVVLDVGCGTG----VLSIFCAFAGAARVYAVDASDIALQAMEIVRENELSDKVIVLHG 159
Query: 131 RIQEAPQMITTCDVISA 147
RI++ ++ DVI +
Sbjct: 160 RIEDV-EIEEKVDVIIS 175
>gi|115482646|ref|NP_001064916.1| Os10g0489100 [Oryza sativa Japonica Group]
gi|75326400|sp|Q75G68|ANM62_ORYSJ RecName: Full=Probable protein arginine N-methyltransferase 6.2
gi|152013355|sp|A2Z8S0|ANM62_ORYSI RecName: Full=Probable protein arginine N-methyltransferase 6.2
gi|40539106|gb|AAR87362.1| putative arginine methyltransferase (alternative splicing) [Oryza
sativa Japonica Group]
gi|110289303|gb|ABB47810.2| Protein arginine N-methyltransferase 6, putative, expressed [Oryza
sativa Japonica Group]
gi|113639525|dbj|BAF26830.1| Os10g0489100 [Oryza sativa Japonica Group]
Length = 395
Score = 40.5 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAARGKVFAC 130
+ +D+G G G + SI + V +++ + + V + + + + V
Sbjct: 84 GKVVLDVGCGTG----VLSIFCAFAGAARVYAVDASDIALQAMEIVRENELSDKVIVLHG 139
Query: 131 RIQEAPQMITTCDVISA 147
RI++ ++ DVI +
Sbjct: 140 RIEDV-EIEEKVDVIIS 155
>gi|283835035|ref|ZP_06354776.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Citrobacter
youngae ATCC 29220]
gi|291069324|gb|EFE07433.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Citrobacter
youngae ATCC 29220]
Length = 343
Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 10/108 (9%)
Query: 44 NLVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGG 99
NL T+ + R D S L + L P+ +D+G G G + + +
Sbjct: 166 NLT-IKTLPGVFSRDGLDVGSQLLLSTLSPHTKGKVLDVGCGAGVLSVALASHSPKVR-- 222
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G V A + + D+I +
Sbjct: 223 -LTLCDVSAAAVEASRATLAANGVEGNVIASNV--FSDVTGRFDMIIS 267
>gi|218779725|ref|YP_002431043.1| methyltransferase type 12 [Desulfatibacillum alkenivorans AK-01]
gi|218761109|gb|ACL03575.1| Methyltransferase type 12 [Desulfatibacillum alkenivorans AK-01]
Length = 530
Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+++G G I + E V+L + K R V++ + ++
Sbjct: 44 QKCRVLEMGCASGGNLIPMAYHFPEAEFVGVDLALEQVKVG---RNVIEDLGLKNIRIEN 100
Query: 130 CRIQEAPQMITTCDVISA 147
I + + D + +
Sbjct: 101 ASIMDIDESWGKFDFVIS 118
>gi|254389598|ref|ZP_05004824.1| methyltransferase type 12 [Streptomyces clavuligerus ATCC 27064]
gi|197703311|gb|EDY49123.1| methyltransferase type 12 [Streptomyces clavuligerus ATCC 27064]
Length = 285
Score = 40.5 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 18/109 (16%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + L P + +++G+G G + + GG V ++ + + L++
Sbjct: 44 SLSEWAL-PPGARCLEIGAGAGTVALWLA---GRCTGGEVTATDTDIRFMAGLQHPA--- 96
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL--------ADLDTLLEYSFP 162
+V ++ T D+I AR++ A L ++ + P
Sbjct: 97 ---LRVLQHDVRTQGFPEETFDLIVARSVLCHLPEREAVLARMVSWLRP 142
>gi|323356746|ref|YP_004223142.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
gi|323273117|dbj|BAJ73262.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
Length = 214
Score = 40.5 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L P ++DLG G G + ++ V ++ + +R +
Sbjct: 51 LANTPPPPAGGHFLDLGCGWGPISLSLALSSPH---ATVWAVDVNERALDLVRRNAESLG 107
Query: 123 ARGKVFACRIQEAPQMIT 140
V A R ++ P I
Sbjct: 108 LTN-VNAVRPEDVPDDIA 124
>gi|15646113|ref|NP_208295.1| hypothetical protein HP1504 [Helicobacter pylori 26695]
gi|2314678|gb|AAD08540.1| conserved hypothetical protein [Helicobacter pylori 26695]
Length = 238
Score = 40.5 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + +V+L+E NK +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGILGL---LCARDNPLAIVHLVEKDNK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D+I
Sbjct: 76 KNALKFPNAQVFEGDFLDFNPPIL-YDIIVC 105
>gi|116627087|ref|YP_819706.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
thermophilus LMD-9]
gi|116100364|gb|ABJ65510.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
thermophilus LMD-9]
gi|312277549|gb|ADQ62206.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
thermophilus ND03]
Length = 396
Score = 40.5 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+GSG G IIT+ Q +E V L E + +F
Sbjct: 156 VHHILDKL----HSEPGKKLLDIGSGWGT-LIITAAQEYGLETYGVTLSEE---QYAFTN 207
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+Q+ + KV +++ + T D I++
Sbjct: 208 QRIQELGLQDKVHVM-LRDYRDVDMTFDYITS 238
>gi|302037529|ref|YP_003797851.1| hypothetical protein NIDE2210 [Candidatus Nitrospira defluvii]
gi|300605593|emb|CBK41926.1| protein of unknown function, putative Methyltransferase [Candidatus
Nitrospira defluvii]
Length = 408
Score = 40.5 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
RV S +D+G G G I+T+ + I+ R + Q+
Sbjct: 93 ARVAGHLGDASTILDVGCGIG---ILTTFYAKRCPASTIVGIDRSPASVDLARQLAQELG 149
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
F CR + + D+I A
Sbjct: 150 LTNVRFECRDLDQQDLAGCFDLIIA 174
>gi|296813261|ref|XP_002846968.1| methyltransferase [Arthroderma otae CBS 113480]
gi|238842224|gb|EEQ31886.1| methyltransferase [Arthroderma otae CBS 113480]
Length = 500
Score = 40.5 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 12/93 (12%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D V + +D+GSG G +I + G IE + L
Sbjct: 258 LTRHEFD--AVLKAVESNKEVLDIGSGHG-----VAIA---KQLGKAYAIEPNGDRNELL 307
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V + ++ ++ P D A
Sbjct: 308 --VSNSAQSSVEIRQGTAEKLPFEDNKFDAAVA 338
>gi|254558770|ref|YP_003065865.1| hypothetical protein METDI0126 [Methylobacterium extorquens DM4]
gi|254266048|emb|CAX21800.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 262
Score = 40.5 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 9/103 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+D+G GGF SI++ V ++S + + R+ V
Sbjct: 53 ASALPADLAGKSVLDIGCNGGF----YSIEMKRRGASRVLGLDSDERYLAQARFAVSHLG 108
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + + DV+ + L P L
Sbjct: 109 HDIEFRNLSVYDVGALAERFDVVLF-----MGVLYHLRHPLLA 146
>gi|222634968|gb|EEE65100.1| hypothetical protein OsJ_20155 [Oryza sativa Japonica Group]
Length = 410
Score = 40.5 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 14/110 (12%)
Query: 43 INLVSSSTVEDFWIRHVE---DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+N S + RH +S + + ID+G GGG + G
Sbjct: 190 MNPTRLSFIRSTLCRHFRRDPNSSKPLE----GLKVIDVGCGGGILSEPLARM-----GA 240
Query: 100 LVNLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V I++ +K K + + + A + F ++ + D + +
Sbjct: 241 TVTGIDAVDKNIKIARVHAASDPSTASIEYFCTTAEDLVKENKQFDAVIS 290
>gi|115466472|ref|NP_001056835.1| Os06g0152300 [Oryza sativa Japonica Group]
gi|113594875|dbj|BAF18749.1| Os06g0152300 [Oryza sativa Japonica Group]
gi|218197598|gb|EEC80025.1| hypothetical protein OsI_21708 [Oryza sativa Indica Group]
Length = 327
Score = 40.5 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 14/110 (12%)
Query: 43 INLVSSSTVEDFWIRHVE---DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+N S + RH +S + + ID+G GGG + G
Sbjct: 107 MNPTRLSFIRSTLCRHFRRDPNSSKPLE----GLKVIDVGCGGGILSEPLARM-----GA 157
Query: 100 LVNLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V I++ +K K + + + A + F ++ + D + +
Sbjct: 158 TVTGIDAVDKNIKIARVHAASDPSTASIEYFCTTAEDLVKENKQFDAVIS 207
>gi|55296632|dbj|BAD69334.1| putative dihydroxypolyprenylbenzoate methyltransferase [Oryza
sativa Japonica Group]
gi|55297285|dbj|BAD69070.1| putative dihydroxypolyprenylbenzoate methyltransferase [Oryza
sativa Japonica Group]
Length = 221
Score = 40.5 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 14/110 (12%)
Query: 43 INLVSSSTVEDFWIRHVE---DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+N S + RH +S + + ID+G GGG + G
Sbjct: 1 MNPTRLSFIRSTLCRHFRRDPNSSKPLE----GLKVIDVGCGGGILSEPLARM-----GA 51
Query: 100 LVNLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V I++ +K K + + + A + F ++ + D + +
Sbjct: 52 TVTGIDAVDKNIKIARVHAASDPSTASIEYFCTTAEDLVKENKQFDAVIS 101
>gi|297834940|ref|XP_002885352.1| arginine N-methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331192|gb|EFH61611.1| arginine N-methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 435
Score = 40.5 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVF 128
+ +D+G G G I SI + V +++ + + VV+ + V
Sbjct: 118 QGKVVVDVGCGTG----ILSIFCAQAGAKRVYAVDASDIAVQA-KEVVKANGLSEKVIVL 172
Query: 129 ACRIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 173 HGRVEDV-EIDEEVDVIIS 190
>gi|326518580|dbj|BAJ88319.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 40.5 bits (94), Expect = 0.088, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAARGKVFAC 130
+ +D+G G G + SI + V +++ + + V + + + + V
Sbjct: 86 GKVVLDVGCGTG----VLSIFCAFAGATRVYAVDASDIALQAMEIVRENELSDKVIVLHG 141
Query: 131 RIQEAPQMITTCDVISA 147
RI++ ++ DVI +
Sbjct: 142 RIEDV-EIEEKVDVIIS 157
>gi|154509065|ref|ZP_02044707.1| hypothetical protein ACTODO_01582 [Actinomyces odontolyticus ATCC
17982]
gi|153798699|gb|EDN81119.1| hypothetical protein ACTODO_01582 [Actinomyces odontolyticus ATCC
17982]
Length = 204
Score = 40.5 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P ++DLG G G I S++ + + V ++ ++ + Q
Sbjct: 51 LEIAPDLPEDGTFLDLGCGWGPIATIMSLESPNAD---VWAVDVNSRAVDLTQRNAQSNG 107
Query: 123 ARGKVFACRIQEA----PQMITTCDVISA 147
A+G V A + +EA + T DVI +
Sbjct: 108 AKG-VRALKAEEALTSSQESDTRFDVIWS 135
>gi|62182975|ref|YP_219392.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|81309498|sp|Q57G51|RSMC_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|62130608|gb|AAX68311.1| 16S rRNA m2G 1207 methylse [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322717481|gb|EFZ09052.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 342
Score = 40.5 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 13/119 (10%)
Query: 36 FLKWSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGII 88
W + N L T+ + R D S L + L P+ +D+G G G
Sbjct: 155 LESWWAEYNIDGLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + L + R + G+VFA + ++ D+I +
Sbjct: 214 LASHSPKAR---LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|257464301|ref|ZP_05628679.1| Methyltransferase type 11 [Fusobacterium sp. D12]
gi|317061810|ref|ZP_07926295.1| conserved hypothetical protein [Fusobacterium sp. D12]
gi|313687486|gb|EFS24321.1| conserved hypothetical protein [Fusobacterium sp. D12]
Length = 263
Score = 40.5 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 37/99 (37%), Gaps = 9/99 (9%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA-SF 113
+H+ + + + P +D+G G G + + + + ++ L + K+ SF
Sbjct: 79 LSKHIIEGIAEYATIPEGGKGLDVGCGSG--ALTIACAKRNPKASMIGL-DYWGKQYPSF 135
Query: 114 LRYVVQKTAA-----RGKVFACRIQEAPQMITTCDVISA 147
+ + +K A+ + + D +++
Sbjct: 136 SQKLCEKNASCEGVGNVTFLEGNAIKMEYPDESFDFVTS 174
>gi|302549517|ref|ZP_07301859.1| methyltransferase type 11 [Streptomyces viridochromogenes DSM
40736]
gi|302467135|gb|EFL30228.1| methyltransferase type 11 [Streptomyces viridochromogenes DSM
40736]
Length = 288
Score = 40.5 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 17/114 (14%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+++ + R ED L +D+G G G GI ++ G ++
Sbjct: 35 LDEMF-RPFEDLLVEAMASERAGRVLDVGCGTG--GITRAVAR---RVGPCVGVDISGPM 88
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA-----------RALADL 153
R ++ QE T D + + RA A+L
Sbjct: 89 IEAARAWAEREGVPASFVRADAQEHAFEPGTFDAVISRFGVMFFDDPVRAFANL 142
>gi|189218270|ref|YP_001938912.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum V4]
gi|189185128|gb|ACD82313.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum V4]
Length = 276
Score = 40.5 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 14/104 (13%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L + +E + ED L +D+ +G G+ + +G V
Sbjct: 44 LTNIEDLE----KTFED----IPLQK-GMKALDVATGNGYTAFFLA-----RQGVEVTAC 89
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ K R + + + ++ P D+++ R
Sbjct: 90 DITEKMFEGARKIADEEGLPIRFCIHSAEKLPYPDRCFDLVTCR 133
>gi|293192305|ref|ZP_06609416.1| putative methyltransferase small domain protein [Actinomyces
odontolyticus F0309]
gi|292820220|gb|EFF79214.1| putative methyltransferase small domain protein [Actinomyces
odontolyticus F0309]
Length = 204
Score = 40.5 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P ++DLG G G I S++ + + V ++ ++ + Q
Sbjct: 51 LEIAPDLPEDGTFLDLGCGWGPIATIMSLESPNAD---VWAVDVNSRAVDLTQRNAQSNG 107
Query: 123 ARGKVFACRIQEA----PQMITTCDVISA 147
A+G V A + +EA + T DVI +
Sbjct: 108 AKG-VRALKAEEALTSSQESDTRFDVIWS 135
>gi|317011638|gb|ADU85385.1| hypothetical protein HPSA_07165 [Helicobacter pylori SouthAfrica7]
Length = 238
Score = 40.1 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFFKNNGAILDIGSGCGILGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I DV+
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDVVVC 105
>gi|222099697|ref|YP_002534265.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga neapolitana DSM
4359]
gi|221572087|gb|ACM22899.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga neapolitana DSM
4359]
Length = 211
Score = 40.1 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +DLG G G GI+ + +E V + + + F + + +V
Sbjct: 61 HGKKVLDLGCGYGVIGIVLKKEYPDLE---VYMSDINKRAVEFAKINAKDHNVEVEV--- 114
Query: 131 RIQEAPQMIT--TCDVISA 147
R + D+I
Sbjct: 115 RWGNLYEPWEGMKFDMIVC 133
>gi|157145533|ref|YP_001452852.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Citrobacter koseri ATCC BAA-895]
gi|157082738|gb|ABV12416.1| hypothetical protein CKO_01276 [Citrobacter koseri ATCC BAA-895]
Length = 277
Score = 40.1 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSST---------VEDFWIRHVEDSL---RVFQL 68
++ E+L + +L R + L + +L
Sbjct: 47 LTDTQREQLAQLLARRQRGEPVAHLTGIREFWSLPLFVSPATLIPRPDTECLVEQALARL 106
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +DLG+G G + + + E V ++ + Q A
Sbjct: 107 PDSPCRILDLGTGTGAIALALATERPDCE---VTAVDRMPDAVALAGRNAQHLAIHNVRI 163
Query: 129 ACRIQEAPQMITTCDVISA 147
A D+I +
Sbjct: 164 LQSDWFAALPGQQFDMIVS 182
>gi|294793156|ref|ZP_06758302.1| putative ribosomal RNA adenine dimethylase [Veillonella sp. 6_1_27]
gi|294456101|gb|EFG24465.1| putative ribosomal RNA adenine dimethylase [Veillonella sp. 6_1_27]
Length = 276
Score = 40.1 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 15/118 (12%)
Query: 35 LFLKWSKKIN---LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L W K+ N L+ S DF + V + + S +D+G+G G I +
Sbjct: 31 LLEYWDKRANDFSLMRKSNDYDFGRK-VY--AALSSVLTPDSSMLDIGAGPGSFTIPFA- 86
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQEAPQ---MITTCDVI 145
V IE + L+ ++ +Q+ PQ + + DV+
Sbjct: 87 ----QHIKSVTAIEPSKGMVAVLKENAKELNVENINIIEEMVQDLPQDGSLDSQFDVV 140
>gi|270308642|ref|YP_003330700.1| hypothetical protein DhcVS_1271 [Dehalococcoides sp. VS]
gi|270154534|gb|ACZ62372.1| hypothetical protein DhcVS_1271 [Dehalococcoides sp. VS]
Length = 277
Score = 40.1 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL-RYV 117
+ D R+ + +D+G+G G I + + G V +E +++ L + +
Sbjct: 61 LLD--RILDITHQGGSLLDIGAGAGSFAIPLA-----LHGVNVTAVEPSPRQSGALAKEI 113
Query: 118 VQKTAARGKVFACRIQE-APQMITTCDVISA 147
+++ A ++ + P+ IT D + A
Sbjct: 114 QKESLANIRIVHDEWEALLPEEITKHDHVMA 144
>gi|163851886|ref|YP_001639929.1| methyltransferase small [Methylobacterium extorquens PA1]
gi|163663491|gb|ABY30858.1| methyltransferase small [Methylobacterium extorquens PA1]
Length = 340
Score = 40.1 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
HP P D+G G G GI+ + +L E V L++ R + +
Sbjct: 156 HPAPRRVADIGCGSGAAGILVAKRLPEAE---VVLVDINPAALRAARINARLAGVGNVRP 212
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + + D+I +
Sbjct: 213 VHSDM--LSNVEGSFDLIVS 230
>gi|52424522|ref|YP_087659.1| SmtA protein [Mannheimia succiniciproducens MBEL55E]
gi|52306574|gb|AAU37074.1| SmtA protein [Mannheimia succiniciproducens MBEL55E]
Length = 256
Score = 40.1 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G GF +I ++ G V I++ + +Y + +
Sbjct: 52 KQNLKVLDIGTGPGF----FAIIMAQA-GAQVTAIDATSNMLEQAKYNAAQAMVDIRFVR 106
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D+I +R
Sbjct: 107 GDVHHLPFADESFDLIISR 125
>gi|15805939|ref|NP_294638.1| hypothetical protein DR_0914 [Deinococcus radiodurans R1]
gi|6458636|gb|AAF10491.1|AE001944_2 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 298
Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 12/91 (13%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ H+ D L +DLG G G G ++ GG V L++ +
Sbjct: 147 ILLTHLAD------LDLTGQRVLDLGCGAGLIG-----AWAASRGGQVTLVDGDLQSVRS 195
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDV 144
+ A G+V + +A DV
Sbjct: 196 SERTLAANALPGEVIHSDV-DAALGERQFDV 225
>gi|195451609|ref|XP_002072998.1| GK13389 [Drosophila willistoni]
gi|194169083|gb|EDW83984.1| GK13389 [Drosophila willistoni]
Length = 382
Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G I S+ + V ++ N F R VV
Sbjct: 93 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVFAVDCSN-IIEFARQVVIDNNLENV 147
Query: 127 --VFACRIQEA--PQMITTCDVISA 147
V +I+E P I D+I +
Sbjct: 148 IQVVKGKIEEVELPNGIEKVDIIIS 172
>gi|86359940|ref|YP_471830.1| putative methyltransferase protein [Rhizobium etli CFN 42]
gi|86284042|gb|ABC93103.1| putative methyltransferase protein [Rhizobium etli CFN 42]
Length = 244
Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF ++++ G V I+S + R+
Sbjct: 47 VVPKDLEGCSVLDIGCNAGF----YALEMKRRNAGRVLGIDSDPRYLEQARFAADHFGLD 102
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + E ++ D++ + L P L
Sbjct: 103 VEFRQMSVYEVSKLGERFDLVLF-----MGVLYHLRHPLLA 138
>gi|86358342|ref|YP_470234.1| putative SAM-dependent methyltransferase protein [Rhizobium etli
CFN 42]
gi|86282444|gb|ABC91507.1| putative SAM-dependent methyltransferase protein [Rhizobium etli
CFN 42]
Length = 247
Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+V +D+G GF S+++ G V I+S + ++T
Sbjct: 47 QVVPEDLRGCSVLDVGCNAGF----YSLEMKKRNAGRVVGIDSDPHYLRQAEFAARQTGE 102
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + E ++ D++ + L P L
Sbjct: 103 DIEFKLMSVYEVEKLKERFDLVLF-----MGVLYHLRHPLLA 139
>gi|70606209|ref|YP_255079.1| hypothetical protein Saci_0370 [Sulfolobus acidocaldarius DSM 639]
gi|68566857|gb|AAY79786.1| hypothetical protein Saci_0370 [Sulfolobus acidocaldarius DSM 639]
Length = 199
Score = 40.1 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 11/86 (12%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN------LIESKNKKASFLRYVVQKTAA 123
+D+G G GF + + + ++ L++S +KA ++
Sbjct: 39 DKEISVLDVGCGLGFLSYVVTQYFPKAKILGIDTFENSSLLDSDMRKA---EENMEHLGI 95
Query: 124 RGKVFACRIQ--EAPQMITTCDVISA 147
R +VF R+ + + + D++ +
Sbjct: 96 RDRVFFKRLNVLDITEELGHFDIVVS 121
>gi|225570297|ref|ZP_03779322.1| hypothetical protein CLOHYLEM_06393 [Clostridium hylemonae DSM
15053]
gi|225160829|gb|EEG73448.1| hypothetical protein CLOHYLEM_06393 [Clostridium hylemonae DSM
15053]
Length = 251
Score = 40.1 bits (93), Expect = 0.097, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 56 IRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
H+++ + P+ + +DLG+G G+ + + +I ++++E + F
Sbjct: 31 EHHLKN---ILDFLPFSADMKILDLGTGSGYLSFPIAKKYPNISIIGLDIVEKALEVNRF 87
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
++ P D++ +R
Sbjct: 88 --KANEENVQNISFITYDGVNFPFADNEFDMVISR 120
>gi|290993196|ref|XP_002679219.1| predicted protein [Naegleria gruberi]
gi|284092835|gb|EFC46475.1| predicted protein [Naegleria gruberi]
Length = 369
Score = 40.1 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ I +D+G+G G + + V +E+ A+F + V+
Sbjct: 45 SIVENAHVFKDKIVMDVGAGTGILSLFAA---KYGGAKKVYAVEASPM-ANFTKLFVEHN 100
Query: 122 AARG--KVFACRIQEAPQMITTCDVISA 147
+ +V R++E + D+I +
Sbjct: 101 GLQDVIEVIHGRVEEIVLPVEKVDIIIS 128
>gi|163849694|ref|YP_001637737.1| methyltransferase type 11 [Methylobacterium extorquens PA1]
gi|163661299|gb|ABY28666.1| Methyltransferase type 11 [Methylobacterium extorquens PA1]
Length = 262
Score = 40.1 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+D+G GGF SI++ V ++S + + R+
Sbjct: 53 ASALPADLTGKSVLDIGCNGGF----YSIEMKRRGASRVLGLDSDERYLAQARFAADHLG 108
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + + DV+ + L P L
Sbjct: 109 HDIEFRNLSVYDVGALAERFDVVLF-----MGVLYHLRHPLLA 146
>gi|237729269|ref|ZP_04559750.1| 16S ribosomal RNA methyltransferase [Citrobacter sp. 30_2]
gi|226908998|gb|EEH94916.1| 16S ribosomal RNA methyltransferase [Citrobacter sp. 30_2]
Length = 343
Score = 40.1 bits (93), Expect = 0.100, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 10/108 (9%)
Query: 44 NLVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGG 99
NL T+ + R D S L + L P+ +D+G G G + + +
Sbjct: 166 NLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVALASHSPKVR-- 222
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G V A + + D+I +
Sbjct: 223 -LTLCDVSAAAVEASRATLAANGIEGDVIASNV--FSDVTGRFDMIIS 267
>gi|170288954|ref|YP_001739192.1| methyltransferase small [Thermotoga sp. RQ2]
gi|170176457|gb|ACB09509.1| methyltransferase small [Thermotoga sp. RQ2]
Length = 210
Score = 40.1 bits (93), Expect = 0.100, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +DLG G G GI+ + +E V + + + F + +
Sbjct: 60 HGKKVLDLGCGYGVIGIVLKKEYPDLE---VYMSDINKRAVEFAKINAKN---HNVEVDI 113
Query: 131 RIQEAPQMIT--TCDVISA 147
R + D+I +
Sbjct: 114 RWGNLYEPWEGMKFDMIVS 132
>gi|317491993|ref|ZP_07950426.1| methyltransferase domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316920018|gb|EFV41344.1| methyltransferase domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 256
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CR 131
+DLG G G + + V + +K +++ + V
Sbjct: 47 DSVLDLGCGAGHASFAVA-----AQVREVVAYDLSDKMLDVVQHAARDRDIDNLVVQQGV 101
Query: 132 IQEAPQMITTCDVISAR 148
+ P + DV+ +R
Sbjct: 102 AESLPFDDESFDVVISR 118
>gi|172060644|ref|YP_001808296.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia ambifaria MC40-6]
gi|171993161|gb|ACB64080.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia ambifaria MC40-6]
Length = 411
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S + IES ++ F+ +
Sbjct: 239 LTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAVA---IESHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 296 GVPGLQLVAGRAPDALAGLAAPDAI 320
>gi|242039299|ref|XP_002467044.1| hypothetical protein SORBIDRAFT_01g018730 [Sorghum bicolor]
gi|241920898|gb|EER94042.1| hypothetical protein SORBIDRAFT_01g018730 [Sorghum bicolor]
Length = 403
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 52 EDFWIRHVEDS-----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
E+ HV S + + + +D+G G G + SI + V +++
Sbjct: 67 EEMLKDHVRTSTYRNAIMHHKDLISGKVVLDVGCGTG----VLSIFCAFAGTSRVYAVDA 122
Query: 107 KNKKASFLRYVVQ-KTAARGKVFACRIQEAPQMITTCDVISA 147
+ + V + + + + V RI++ + DVI +
Sbjct: 123 SDIALQAMEIVRENELSDKVVVLHGRIEDV-NIEEKVDVIIS 163
>gi|321312242|ref|YP_004204529.1| putative methyltransferase [Bacillus subtilis BSn5]
gi|320018516|gb|ADV93502.1| putative methyltransferase [Bacillus subtilis BSn5]
Length = 183
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+K L T+E I DS+ +++G G G + +E G
Sbjct: 21 RKYKLT--KTIEHMMI----DSI----DIQENDRILEMGIGNG---TVFKSITKKLEKGS 67
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ I+ +K + +K G+VF ++ P T + + +
Sbjct: 68 LKSIDPSKRKVRQISRANRKNMGNGEVFHGYPEDIPFDDRTFNKVFS 114
>gi|317485129|ref|ZP_07944011.1| methyltransferase domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|316923664|gb|EFV44868.1| methyltransferase domain-containing protein [Bilophila wadsworthia
3_1_6]
Length = 248
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR F L +D+G G GF I+ + S+ + E ++AS +
Sbjct: 37 LRPFVLASGKLDILDIGCGPGFFSILLARLGHSV--VAFDYTEGMLERAS---RNAAEAD 91
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR 148
V Q+ P T D+I +R
Sbjct: 92 VSIVVRQGDAQDLPFPDETFDLIVSR 117
>gi|125592061|gb|EAZ32411.1| hypothetical protein OsJ_16622 [Oryza sativa Japonica Group]
Length = 384
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 6/78 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFA 129
+ +D+G G G I S+ + V +E+ V + V
Sbjct: 83 EGKVVMDVGCGTG----ILSVFCARAGAKCVYAVEASEMATQAREIVKANNLDDKVVVVH 138
Query: 130 CRIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 139 GRVEDV-EVEDKVDVIIS 155
>gi|152013354|sp|A2XYY8|ANM61_ORYSI RecName: Full=Probable protein arginine N-methyltransferase 6.1
gi|90399032|emb|CAJ86228.1| H0402C08.4 [Oryza sativa Indica Group]
gi|125550226|gb|EAY96048.1| hypothetical protein OsI_17921 [Oryza sativa Indica Group]
Length = 379
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 6/78 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFA 129
+ +D+G G G I S+ + V +E+ V + V
Sbjct: 83 EGKVVMDVGCGTG----ILSVFCARAGAKCVYAVEASEMATQAREIVKANNLDDKVVVVH 138
Query: 130 CRIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 139 GRVEDV-EVEDKVDVIIS 155
>gi|75327244|sp|Q7XKC0|ANM61_ORYSJ RecName: Full=Probable protein arginine N-methyltransferase 6.1
gi|38344195|emb|CAE05760.2| OSJNBa0064G10.11 [Oryza sativa Japonica Group]
Length = 391
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 6/78 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFA 129
+ +D+G G G I S+ + V +E+ V + V
Sbjct: 83 EGKVVMDVGCGTG----ILSVFCARAGAKCVYAVEASEMATQAREIVKANNLDDKVVVVH 138
Query: 130 CRIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 139 GRVEDV-EVEDKVDVIIS 155
>gi|228917937|ref|ZP_04081473.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228841734|gb|EEM86845.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 283
Score = 40.1 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 33/109 (30%), Gaps = 23/109 (21%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA----------RALAD 152
+ + A + + + DV+ + RAL+
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRALSP 202
>gi|307718496|ref|YP_003874028.1| hypothetical protein STHERM_c08060 [Spirochaeta thermophila DSM
6192]
gi|306532221|gb|ADN01755.1| hypothetical protein STHERM_c08060 [Spirochaeta thermophila DSM
6192]
Length = 180
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++DL +G G I +I+ +S V +E +K L +++ G++
Sbjct: 42 EGRSFLDLFAGSG----IMAIEAASRGASPVVCVEKDRRKRPVLERNLRELGIDGRILIE 97
Query: 131 RIQEAPQMITT-CDVI 145
+ + T+ DVI
Sbjct: 98 PAEHYIRHATSPFDVI 113
>gi|303238635|ref|ZP_07325168.1| ribosomal protein L11 methyltransferase [Acetivibrio cellulolyticus
CD2]
gi|302593754|gb|EFL63469.1| ribosomal protein L11 methyltransferase [Acetivibrio cellulolyticus
CD2]
Length = 314
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + + IDLG G G I SI + + V ++ +
Sbjct: 165 SILLEKYVKPGDKVIDLGCGTG----ILSIIAAKLGAEAVTAVDIDEVAVKVAKENCAIN 220
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
GKV A R D+I A
Sbjct: 221 GVDGKVSAFRGVIDDLKKEKADIIVA 246
>gi|315500228|ref|YP_004089031.1| ubiquinone biosynthesis o-methyltransferase [Asticcacaulis
excentricus CB 48]
gi|315418240|gb|ADU14880.1| ubiquinone biosynthesis O-methyltransferase [Asticcacaulis
excentricus CB 48]
Length = 269
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 32/112 (28%), Gaps = 13/112 (11%)
Query: 36 FLKWSKKINLVSSSTVEDFWIRHVE-DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
K++ + D + H D V ID+G GGG
Sbjct: 53 LHKFNPN----RVRFIRDTCVDHFLRDPRAVAPFGDL--RLIDIGCGGGLLSEPMKRM-- 104
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT-CDVI 145
G V I++ K + + + A +++ DV+
Sbjct: 105 ---GFDVTGIDASEKNIGTAKAHAAEVGLDIRYLAQTVEQVVASKEPGFDVV 153
>gi|289810299|ref|ZP_06540928.1| 16S rRNA methyltransferase GidB [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 82
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 135 APQMITTCDVISARALADLDTLLEYSFPW 163
A D + +RA A L+ ++ +
Sbjct: 1 AYPSEPPFDGVISRAFASLNDMVSWCHHL 29
>gi|281412563|ref|YP_003346642.1| methyltransferase small [Thermotoga naphthophila RKU-10]
gi|281373666|gb|ADA67228.1| methyltransferase small [Thermotoga naphthophila RKU-10]
Length = 210
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +DLG G G GI+ + +E V + + + F + +
Sbjct: 60 HGKKVLDLGCGYGVIGIVLKKEYPDLE---VYMSDINKRAVEFAKINAKN---HNVEVDI 113
Query: 131 RIQEAPQMIT--TCDVISA 147
R + D+I +
Sbjct: 114 RWGNLYEPWEGMKFDMIVS 132
>gi|89891629|ref|ZP_01203133.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7]
gi|89516176|gb|EAS18839.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7]
Length = 281
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+G+G G G+ +V L++ + + + K +
Sbjct: 117 IIDIGTGTGCIGLSLKAAKPDC---IVTLMDVSEEALATAQSNANHLKTPVKTILQDVLA 173
Query: 135 APQMITTCDVISA 147
++ D+I +
Sbjct: 174 LDELPEKYDIIVS 186
>gi|330945099|gb|EGH46833.1| hypothetical protein PSYPI_32873 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 220
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ +D+G G G ++ ++ + V+ ++ K F + + +
Sbjct: 136 NRAVDIGCGTGAGAMLIAVARPQAQ---VHAVDINPKALHFAQTNAAVAGLKNMECCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLSGNFDLIVA 206
>gi|55140592|gb|AAV41837.1| protein arginine methyltransferase 1 isoform 4 [Homo sapiens]
Length = 327
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNK--KASF 113
H +S+ + + +D+GSG G + + + G+V + + K KA+
Sbjct: 31 HFGNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIVCSSISDYAVKIVKANK 90
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
L +VV + +++E + D+I +
Sbjct: 91 LDHVV-------TIIKGKVEEVELPVEKVDIIIS 117
>gi|226365536|ref|YP_002783319.1| hypothetical protein ROP_61270 [Rhodococcus opacus B4]
gi|226244026|dbj|BAH54374.1| hypothetical protein [Rhodococcus opacus B4]
Length = 274
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DLGS GF + + + G V + + L V + + C
Sbjct: 128 GSVLDLGSCFGF--LPLRLARA---GRTVTATDILPGTMTLLDAVAPELGLDLRTLVCDA 182
Query: 133 QEAPQMITTCDVISA 147
P + D ++A
Sbjct: 183 AHVPVPDDSADTVTA 197
>gi|150376043|ref|YP_001312639.1| type 11 methyltransferase [Sinorhizobium medicae WSM419]
gi|150030590|gb|ABR62706.1| Methyltransferase type 11 [Sinorhizobium medicae WSM419]
Length = 257
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF + ++ G V I+S ++ ++
Sbjct: 52 VVPEDLEGRSVLDIGCNAGF----YAQEMKRRNAGRVLGIDSDPHYLRQAKFAAEQAGVE 107
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + +A ++ D++ + L P L
Sbjct: 108 IEFRLMSVYDAARLREKFDLVIF-----MGVLYHLRHPLLA 143
>gi|217031851|ref|ZP_03437354.1| hypothetical protein HPB128_199g59 [Helicobacter pylori B128]
gi|298735525|ref|YP_003728046.1| hypothetical protein HPB8_25 [Helicobacter pylori B8]
gi|216946503|gb|EEC25105.1| hypothetical protein HPB128_199g59 [Helicobacter pylori B128]
gi|298354710|emb|CBI65582.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 238
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGILGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I DVI
Sbjct: 76 KNALKFPNAQVFEGDFLDFNPPIL-YDVIVC 105
>gi|16271987|ref|NP_438185.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
Rd KW20]
gi|260580684|ref|ZP_05848511.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
influenzae RdAW]
gi|1176480|sp|P44453|RSMC_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|1572956|gb|AAC21690.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092746|gb|EEW76682.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
influenzae RdAW]
Length = 330
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 17/100 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + + + + + + + R + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSMIKKRTPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA------------RALADLDTLLEY 159
+ + D+I + RA+ +L T ++
Sbjct: 248 V--FSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKW 285
>gi|327354781|gb|EGE83638.1| hypothetical protein BDDG_06582 [Ajellomyces dermatitidis ATCC
18188]
Length = 317
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 12/103 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P P +D+G+G G + S + V+L S +R + T
Sbjct: 70 LHLAPIGPSPQNILDIGAGTGIWCCEMGDEYPSAQILGVDL--------SAIRNTMHATP 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR----ALADLDTLLEYSF 161
+ I+ I + D I R A+ D L+E F
Sbjct: 122 ENVRFEIDDIESEWAFIDSFDYIHCRYMYAAIRDWPRLVERCF 164
>gi|315187032|gb|EFU20789.1| methyltransferase [Spirochaeta thermophila DSM 6578]
Length = 180
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++DL +G G I +I+ +S V +E +K L +++ G++
Sbjct: 42 EGRSFLDLFAGSG----IMAIEAASRGASPVVCVEKDRRKRPVLERNLRELGIDGRILIE 97
Query: 131 RIQEAPQM-ITTCDVI 145
+ + ++ DVI
Sbjct: 98 PAEHYIRHAVSPFDVI 113
>gi|239613151|gb|EEQ90138.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 322
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 12/103 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P P +D+G+G G + S + V+L S +R + T
Sbjct: 75 LHLAPIGPSPQNILDIGAGTGIWCCEMGDEYPSAQILGVDL--------SAIRNTMHATP 126
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR----ALADLDTLLEYSF 161
+ I+ I + D I R A+ D L+E F
Sbjct: 127 ENVRFEIDDIESEWAFIDSFDYIHCRYMYAAIRDWPRLVERCF 169
>gi|261190985|ref|XP_002621901.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239590945|gb|EEQ73526.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 317
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 12/103 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P P +D+G+G G + S + V+L S +R + T
Sbjct: 70 LHLAPIGPSPQNILDIGAGTGIWCCEMGDEYPSAQILGVDL--------SAIRNTMHATP 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR----ALADLDTLLEYSF 161
+ I+ I + D I R A+ D L+E F
Sbjct: 122 ENVRFEIDDIESEWAFIDSFDYIHCRYMYAAIRDWPRLVERCF 164
>gi|258405576|ref|YP_003198318.1| Methyltransferase type 11 [Desulfohalobium retbaense DSM 5692]
gi|257797803|gb|ACV68740.1| Methyltransferase type 11 [Desulfohalobium retbaense DSM 5692]
Length = 366
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 25/88 (28%), Gaps = 7/88 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ Y D+G G G ++ + ++ + R
Sbjct: 171 AIQDRLHYGIRVCDVGCGRGTAVLLMAEAFP---RSTFVGLDIDSATVDLARNTAAARGL 227
Query: 124 RGKVFACR----IQEAPQMITTCDVISA 147
F CR +++A D ++A
Sbjct: 228 TNVRFVCRDAAVLEDAADWQDCFDYVTA 255
>gi|219666410|ref|YP_002456845.1| methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
gi|219536670|gb|ACL18409.1| Methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
Length = 252
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ F +D+G G GF I S G V ++ K + R ++K
Sbjct: 38 LKPFVQTDRKLEILDVGCGAGFFEIFLSCL-----GHHVTAVDFNGKMLAEARKNIEKLG 92
Query: 123 AR--GKVFACRIQEAPQMITTCDVISAR 148
K+ Q + D++ +R
Sbjct: 93 RPELTKLMQMDAQNLAFQDSVFDIVISR 120
>gi|328949041|ref|YP_004366378.1| ribosomal small subunit Rsm22 [Treponema succinifaciens DSM 2489]
gi|328449365|gb|AEB15081.1| Ribosomal small subunit Rsm22 [Treponema succinifaciens DSM 2489]
Length = 453
Score = 40.1 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 43/139 (30%), Gaps = 23/139 (16%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L + + W NLV + ++ D S+++DLGSG +
Sbjct: 132 LSAYVHYYTWW----NLVRLVRLFSNIDKNFFD-------VKDSSVFLDLGSGPLTVPLA 180
Query: 89 TSIQLSSIEGGL--VNLIESKNKKASF-----LRYVVQKTAARGKVFACRIQEAPQMITT 141
+ + ++ + +F L + K+ + + +
Sbjct: 181 LFLSRPELRKKCITFYCLDISQQALAFGENIFLSVAARLKCEPWKIVRVKGELGSALKEK 240
Query: 142 CDVISARALADLDTLLEYS 160
D +++ A+L E
Sbjct: 241 ADFVTS---ANL--FNELC 254
>gi|145635202|ref|ZP_01790906.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittAA]
gi|229845358|ref|ZP_04465489.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
6P18H1]
gi|145267481|gb|EDK07481.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittAA]
gi|229811666|gb|EEP47364.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
6P18H1]
Length = 330
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 17/100 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + + + + + + + R + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSMIKKRAPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA------------RALADLDTLLEY 159
+ + D+I + RA+ +L T ++
Sbjct: 248 V--FSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKW 285
>gi|145246190|ref|XP_001395344.1| ubiE/COQ5 methyltransferase [Aspergillus niger CBS 513.88]
gi|134080057|emb|CAK41104.1| unnamed protein product [Aspergillus niger]
Length = 270
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 9/90 (10%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Query: 60 EDSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+S + + +D+G G G + + + + + +++ S R +
Sbjct: 25 LNSAQYLLPHLQPQMKILDIGCGPGTITVDLATYVPNGHVTGLEMVDDV---LSGARQLA 81
Query: 119 QKTAARG-KVFACRIQEAPQMITTCDVISA 147
+ + + DV+
Sbjct: 82 ESRGIHNIEFVTGDANNLAYAEGSFDVVVC 111
>gi|307725756|ref|YP_003908969.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia sp. CCGE1003]
gi|307586281|gb|ADN59678.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia sp. CCGE1003]
Length = 416
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + V E+ ++ F+ +
Sbjct: 239 ITLARLAPAPGELLWDVGAGSGSIGIEWMRAHPACRAIAV---EAHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R EA + D +
Sbjct: 296 GVPGLQLVAGRAPEALAGLPAPDAV 320
>gi|303245172|ref|ZP_07331482.1| Methyltransferase type 11 [Methanothermococcus okinawensis IH1]
gi|302484461|gb|EFL47415.1| Methyltransferase type 11 [Methanothermococcus okinawensis IH1]
Length = 205
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 16/100 (16%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTA 122
+ + +D+G G GF +I + + G ++ ++ KKA
Sbjct: 37 LSETFKGKMKILDVGCGTGFLSLILAELGHEVVGIDLSEGMLSKAEKKA-------GDLG 89
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P + D++ R L ++ P
Sbjct: 90 LNIDFIIGDAENLPFDDGSFDIVVER-----HIL--WTLP 122
>gi|294675767|ref|YP_003576382.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacter
capsulatus SB 1003]
gi|294474587|gb|ADE83975.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacter
capsulatus SB 1003]
Length = 247
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 5/77 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V ++ K + +++ C
Sbjct: 63 EGLRLLDIGCGGGLLAEPMARL-----GATVVGADAAPKNIPVAKLHAEQSGLTIDYRNC 117
Query: 131 RIQEAPQMITTCDVISA 147
++ DV+ A
Sbjct: 118 AAEDLAAAGERFDVVLA 134
>gi|210135671|ref|YP_002302110.1| hypothetical protein HPP12_1482 [Helicobacter pylori P12]
gi|210133639|gb|ACJ08630.1| hypothetical protein HPP12_1482 [Helicobacter pylori P12]
Length = 238
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGILGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I DVI
Sbjct: 76 KNALKFPNAQVFEGDFLDFNPPIL-YDVIVC 105
>gi|123967723|ref|YP_001008581.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. AS9601]
gi|123197833|gb|ABM69474.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. AS9601]
Length = 233
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 28/140 (20%)
Query: 36 FLKWSKKINLVSSSTVEDFWIR-----H---VEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
F +W+K S S + + H V+D + + +P + D G G G
Sbjct: 21 FERWNKIY---SKSDEINTVQKNIRKGHQKTVDDVVSYIKNYPELTKKSYCDAGCGVGSL 77
Query: 86 GIIT---SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
I I+ + +IE K+ + + + + ++
Sbjct: 78 SIPLLRLGIKELQLSDISYEMIEETKKR-------IHELGLSQGKIKYEVCDLEKLKGLF 130
Query: 143 DVISARALADLDTLLEYSFP 162
DV+ LD + Y P
Sbjct: 131 DVVVC-----LDVFIHYPQP 145
>gi|146307761|ref|YP_001188226.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas mendocina ymp]
gi|145575962|gb|ABP85494.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
[Pseudomonas mendocina ymp]
Length = 306
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + RH L P+ +DL +G G GI + + E V L
Sbjct: 106 LVPRSPIAELIERHFA-----PWLPQEPARVLDLCTGSGCIGIACAYEFPEAE---VVLA 157
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT-CDVISA 147
+ + +++ +V+ + + D+I +
Sbjct: 158 DLSFEALEVANQNIERHGLEERVYCVQGDGFAGLPGQRFDLIVS 201
>gi|89067498|ref|ZP_01155011.1| hypothetical protein OG2516_11676 [Oceanicola granulosus HTCC2516]
gi|89047067|gb|EAR53121.1| hypothetical protein OG2516_11676 [Oceanicola granulosus HTCC2516]
Length = 253
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 39/137 (28%), Gaps = 30/137 (21%)
Query: 43 INLV--SSSTVEDFWIRHVE------------DSLRVFQLHPYPSIWIDLGSGGGFPGII 88
NL T D H D V + +D+G GF
Sbjct: 21 HNLTIDGIETAPD----HFLGDYPRFKFEGFRD---VLPDDLQGASVLDIGCNAGF---- 69
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
S++++ G V I+S + + ++ + + + + D++
Sbjct: 70 YSLEMARRGAGRVVGIDSDPHYLAQAEFAAERAGVELDLRQMDVYDVAALGERFDLVIF- 128
Query: 149 ALADLDTLLEYSFPWLY 165
+ L P L
Sbjct: 129 ----MGVLYHLRHPLLA 141
>gi|294495951|ref|YP_003542444.1| ArsR family transcriptional regulator [Methanohalophilus mahii DSM
5219]
gi|292666950|gb|ADE36799.1| transcriptional regulator, ArsR family [Methanohalophilus mahii DSM
5219]
Length = 349
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +DLGSGGGF I + + G V ++ + R +K F
Sbjct: 165 IKEGDVVLDLGSGGGFDSFIAA--RKVGKTGKVIGVDMTEDMVAKARKNAEKYELDNVEF 222
Query: 129 A-CRIQEAPQMITTCDVISA 147
I+ P + DVI +
Sbjct: 223 RQGDIESLPVEADSVDVIIS 242
>gi|327401522|ref|YP_004342361.1| type 11 methyltransferase [Archaeoglobus veneficus SNP6]
gi|327317030|gb|AEA47646.1| Methyltransferase type 11 [Archaeoglobus veneficus SNP6]
Length = 252
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 22/115 (19%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESK 107
++ + W D + + +D+G+G GF +I + + G ++ ++E
Sbjct: 31 SLPEVWR----D--VLASVFERRMQILDVGTGTGFLALILAELGHEVVGIDLSKGMLEVA 84
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
KKA +K + + P + D + R L ++ P
Sbjct: 85 KKKA-------RKLGVDVEFKLGDAENLPFDDCSFDAVICR-------HLLWTLP 125
>gi|296775714|gb|ADH42990.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
[uncultured SAR11 cluster alpha proteobacterium
H17925_38M03]
Length = 176
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 25/137 (18%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKI------NLVSSSTVEDFWIRHV------EDSLRVFQL 68
+++E ++K + + K N + + + +H SL
Sbjct: 5 INKEEIQKFSKLSEEWWDVNGKFKPLHMFNPIRIEYITENIKKHFNIKEDKIXSL----- 59
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G GGG + G V I++ K + + ++
Sbjct: 60 --EGLKILDIGCGGGLISEPMTRL-----GAKVTGIDASEKNINIAKMHSKENGLEINYI 112
Query: 129 ACRIQEAPQMITTCDVI 145
+ + DVI
Sbjct: 113 NSSPENLKNF-ESFDVI 128
>gi|294777681|ref|ZP_06743132.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides vulgatus PC510]
gi|319640267|ref|ZP_07994992.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A]
gi|294448749|gb|EFG17298.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides vulgatus PC510]
gi|317388042|gb|EFV68896.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A]
Length = 278
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 22/140 (15%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGII 88
E FY L + +K + L+ + + + H Y +D+G+G G +
Sbjct: 76 EEFYGLTFEVNKHV-LIPRPETGELVD-------WIIREHKYGRVRILDIGTGSGCIAVS 127
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA- 147
+ ++E V + K ++ R + + A DVI +
Sbjct: 128 LA---KNLEEAEVVSWDVSEKVLQVAERNCRRNGVRVTLEQRDVLLASPAGERFDVIVSN 184
Query: 148 --------RALADLDTLLEY 159
RA + L E+
Sbjct: 185 PPYITEKERADMSANVL-EW 203
>gi|190892462|ref|YP_001979004.1| SAM-dependent methyltransferase [Rhizobium etli CIAT 652]
gi|190697741|gb|ACE91826.1| putative SAM-dependent methyltransferase protein [Rhizobium etli
CIAT 652]
Length = 248
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+V +D+G GF S+++ G V I+S + ++T
Sbjct: 47 QVVPEDLRGCSVLDIGCNAGF----YSLEMKRRNAGRVVGIDSDPHYLRQAEFAARQTGE 102
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + E ++ D++ + L P L
Sbjct: 103 DIEFKLMSVYEVEKLKERFDLVLF-----MGVLYHLRHPLLA 139
>gi|119718979|ref|YP_919474.1| FkbM family methyltransferase [Thermofilum pendens Hrk 5]
gi|119524099|gb|ABL77471.1| methyltransferase FkbM family [Thermofilum pendens Hrk 5]
Length = 259
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
S +E +++H D + F P S +DLG+ GF + S G + +E+
Sbjct: 49 SLRNLEHVFVKHDYDRIPGFTRVPRGSTVVDLGAYVGFFSVKV---HSESPGARLVAVEA 105
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQE 134
+ +LR+ ++ R + + + E
Sbjct: 106 NPQACRYLRHNLRMNGVRSEAYCLAVGE 133
>gi|3282093|emb|CAA07516.1| hypothetical protein [Thermotoga neapolitana]
Length = 258
Score = 39.7 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 12/102 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G G G I +I + V ++ + + VQK +
Sbjct: 115 LFLKKYLKKGDRVVDVGCGTG----ILAIVAKKLGASYVLAVDVDEQAVEVAKENVQKNS 170
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V + ++ D++ + + L E L
Sbjct: 171 VDVTVKRSDL--LSEVEGVFDLVVS------NILAEIHLRLL 204
>gi|293335625|ref|NP_001170456.1| hypothetical protein LOC100384449 [Zea mays]
gi|224035955|gb|ACN37053.1| unknown [Zea mays]
Length = 377
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
S VF+ P + +D+G+G G I +I + V +E+ N A R +
Sbjct: 53 YHS-AVFRNAPHFQGKVVLDVGTGSG----ILAIWSAQAGARKVYAVEATNM-AEHAREL 106
Query: 118 VQKTAAR--GKVFACRIQEAPQMITTCDVISA 147
+ +V +++ + DVI +
Sbjct: 107 ARANGVTDIVEVIQGTVEDV-DLPEKVDVIIS 137
>gi|258513864|ref|YP_003190086.1| Methyltransferase type 11 [Desulfotomaculum acetoxidans DSM 771]
gi|257777569|gb|ACV61463.1| Methyltransferase type 11 [Desulfotomaculum acetoxidans DSM 771]
Length = 247
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G GF II S G V I+ + R + Q
Sbjct: 50 ILDVGTGPGFFTIIMSQV-----GNNVTAIDCTEAMINEARANAKSEGVTASFRVSDGQN 104
Query: 135 APQMITTCDVISARALA 151
+ D+I +R +A
Sbjct: 105 LEFDDESFDLIISRNVA 121
>gi|328771746|gb|EGF81785.1| hypothetical protein BATDEDRAFT_9853 [Batrachochytrium
dendrobatidis JAM81]
Length = 265
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 16/122 (13%)
Query: 33 YFLFLKWSKKINLVSSSTVEDFWIRH-VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
Y L K+N V V D + H S L +D+G GGGF +
Sbjct: 34 YKLLH----KMNPVRVKYVRDMLVAHNAVTSESTLALPFAGMRLLDIGCGGGFLSEALAR 89
Query: 92 QLSSIEGGLVNLIESKNKKASF------LRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G V ++ + + L +++K ++ Q D +
Sbjct: 90 L-----GAQVVGADASGENINVATAHYALDRLLKKGPGSIDYRHTTAEKLAQQGEQFDAV 144
Query: 146 SA 147
A
Sbjct: 145 VA 146
>gi|300715429|ref|YP_003740232.1| methyltransferase type 11 [Erwinia billingiae Eb661]
gi|299061265|emb|CAX58374.1| Methyltransferase type 11 [Erwinia billingiae Eb661]
Length = 254
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 6/82 (7%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGK 126
+ +DLG GGG I + V + K + + ++
Sbjct: 40 FAEKDAHLLDLGCGGGHASYIAA-----QHVKSVVAYDLSAKMLAVVAEAAKERGYEHLS 94
Query: 127 VFACRIQEAPQMITTCDVISAR 148
+ P + D++ +R
Sbjct: 95 TVQGYAEYLPFADESFDIVISR 116
>gi|284029539|ref|YP_003379470.1| type 11 methyltransferase [Kribbella flavida DSM 17836]
gi|283808832|gb|ADB30671.1| Methyltransferase type 11 [Kribbella flavida DSM 17836]
Length = 251
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFAC 130
+D+G+G GF +++L+ V ++ LR V+ R ++
Sbjct: 34 GQTVVDIGAGTGF----LTVELAQRSAARVIAVDPWADAMDVLRRKVEYLGLRDVELVVS 89
Query: 131 RIQEAPQMITTCDVISA 147
+ DV+ +
Sbjct: 90 DAARLELPDGSVDVVVS 106
>gi|260913627|ref|ZP_05920103.1| methyltransferase [Pasteurella dagmatis ATCC 43325]
gi|260632166|gb|EEX50341.1| methyltransferase [Pasteurella dagmatis ATCC 43325]
Length = 495
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 5/88 (5%)
Query: 62 SLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
SL FQ + +++G G G I ++ + ++L E K+ R VV++
Sbjct: 34 SLLGFQTPEIKGAKVLEIGCGFGGNIISYALANPDTQFTGIDLSE---KQIEGGREVVKQ 90
Query: 121 TAARG-KVFACRIQEAPQMITTCDVISA 147
++ I D I
Sbjct: 91 LGLTNVELLCQDISCFENQDVKFDYIIC 118
>gi|294494733|ref|YP_003541226.1| methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
gi|292665732|gb|ADE35581.1| Methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
Length = 258
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 17/113 (15%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ W + SL + L P +D+G+G GF ++ L+ + G V I+
Sbjct: 28 EERELWKQ----SLFPY-LGQGPLKVLDIGTGRGF----LALLLADM-GHEVTAIDISQS 77
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ K K + ++ DV+ + L ++ P
Sbjct: 78 MLEKAQREAIKLNLDIKFEKGDAENLAFADSSFDVVVS-------KYLLWTLP 123
>gi|163744087|ref|ZP_02151453.1| hypothetical protein RG210_08049 [Phaeobacter gallaeciensis 2.10]
gi|161382634|gb|EDQ07037.1| hypothetical protein RG210_08049 [Phaeobacter gallaeciensis 2.10]
Length = 538
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 15/93 (16%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH D + +LG G GF + + ++ V+ ++ + +
Sbjct: 37 RHGLD--------DSGLTYCELGCGQGFTANLLAAANPHVD---VHAMDFNPAHIAGAQR 85
Query: 117 VVQKTAARGKVFACR----IQEAPQMITTCDVI 145
+ Q+ A F R +E + + DVI
Sbjct: 86 LAQEAAVPNVTFYERSFEDFEEEANLPNSFDVI 118
>gi|16803236|ref|NP_464721.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
EGD-e]
gi|47095038|ref|ZP_00232651.1| precorrin-8W decarboxylase [Listeria monocytogenes str. 1/2a F6854]
gi|224499130|ref|ZP_03667479.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
Finland 1988]
gi|224502508|ref|ZP_03670815.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
FSL R2-561]
gi|254828555|ref|ZP_05233242.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL N3-165]
gi|254830050|ref|ZP_05234705.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
10403S]
gi|254898643|ref|ZP_05258567.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
J0161]
gi|254911868|ref|ZP_05261880.1| precorrin-8W decarboxylase [Listeria monocytogenes J2818]
gi|254936193|ref|ZP_05267890.1| precorrin-8W decarboxylase [Listeria monocytogenes F6900]
gi|16410612|emb|CAC99274.1| lmo1196 [Listeria monocytogenes EGD-e]
gi|47016656|gb|EAL07576.1| precorrin-8W decarboxylase [Listeria monocytogenes str. 1/2a F6854]
gi|258600952|gb|EEW14277.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL N3-165]
gi|258608782|gb|EEW21390.1| precorrin-8W decarboxylase [Listeria monocytogenes F6900]
gi|293589825|gb|EFF98159.1| precorrin-8W decarboxylase [Listeria monocytogenes J2818]
Length = 189
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I V IE ++ K
Sbjct: 22 SIDLLSLDEKSKKLLDVGAGTGSVGLQVACNFPKIH---VTAIERNPDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 79 GLENIAVIEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 120
>gi|188590813|ref|YP_001795413.1| hypothetical protein RALTA_A0018 [Cupriavidus taiwanensis LMG
19424]
gi|170937707|emb|CAP62691.1| conserved hypothetical protein; putative methyltransferase
[Cupriavidus taiwanensis LMG 19424]
Length = 297
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 27/90 (30%), Gaps = 13/90 (14%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G G G ++ G ++ + R Q+ QE
Sbjct: 56 ILDVGCGTG--STTLALARHIGAQGHCTGVDISGPMLAVARTRAQREGINASFIHADAQE 113
Query: 135 APQMITTCDVISA-----------RALADL 153
+ D+I + RA A+L
Sbjct: 114 HAFAAASFDMIVSRLGVMFFSDPVRAFANL 143
>gi|312883994|ref|ZP_07743711.1| ribosomal RNA small subunit methyltransferase C [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309368452|gb|EFP95987.1| ribosomal RNA small subunit methyltransferase C [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 340
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 9/122 (7%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFP 85
E ++ + + ++L+ ++ + D S + P +D G G G
Sbjct: 156 FEQWFKEYQVEYRDMSLI-IRSLPGVFSHGEFDVGSQLLLDNLPDIDGKVLDFGCGAGVI 214
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G + + IE + + + + + +++ G VFA + + I
Sbjct: 215 GCVIAKLNPDIE---LEMCDISALAVASSQATLERNQLNGNVFASDV--YSDTGSDYHFI 269
Query: 146 SA 147
+
Sbjct: 270 VS 271
>gi|309800605|ref|ZP_07694749.1| methyltransferase GidB [Streptococcus infantis SK1302]
gi|308115751|gb|EFO53283.1| methyltransferase GidB [Streptococcus infantis SK1302]
Length = 40
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 5/24 (20%), Positives = 15/24 (62%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKK 42
++S + + E ++ L ++W++K
Sbjct: 15 IHLSDQQKVQFERYFELLVEWNEK 38
>gi|268326458|emb|CBH40046.1| conserved hypothetical protein, SAM-dependent methyltransferase
type 12 family [uncultured archaeon]
Length = 276
Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 10/95 (10%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+ R+V D + +D+G+G G I + V +++ L
Sbjct: 48 YGRNVID--VIKDFIEPDFEVLDIGAGPGTLTIPIARL-----VNKVTVVDPSKGMIKVL 100
Query: 115 RYVVQKTAARG-KVFACRIQEA--PQMITTCDVIS 146
T + QE ++ D++
Sbjct: 101 EESAAATGIENIETINKSWQEIDDAKIREKFDLVI 135
>gi|319956549|ref|YP_004167812.1| methyltransferase small [Nitratifractor salsuginis DSM 16511]
gi|319418953|gb|ADV46063.1| methyltransferase small [Nitratifractor salsuginis DSM 16511]
Length = 232
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 8/90 (8%)
Query: 61 DSLRVFQLH---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+ + +D+G G G ++ V L E + K + +
Sbjct: 15 DSIFLVDFIRRFKPKGKLLDVGCGVGIISLLLGRDYP----VEVYLAEKQPKMLEYALHN 70
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ EA Q+ D+I +
Sbjct: 71 FTLNGIEAHAYPGDFLEA-QIEERFDLIVS 99
>gi|116627670|ref|YP_820289.1| hypothetical protein STER_0852 [Streptococcus thermophilus LMD-9]
gi|116100947|gb|ABJ66093.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus thermophilus
LMD-9]
gi|312278193|gb|ADQ62850.1| Methyltransferase small domain protein [Streptococcus thermophilus
ND03]
Length = 196
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G I L+ ++G +I+ ++ + ++ +F
Sbjct: 55 LERGKNLLDVGCGYG----PLGISLAKVQGVQSTMIDINSRAIDLAKKNAERNGVVAHIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I + D I + RA
Sbjct: 111 QSNI--YENVSEKFDYIISNPPIRA 133
>gi|16263976|ref|NP_436768.1| hypothetical protein SM_b20238 [Sinorhizobium meliloti 1021]
gi|15140100|emb|CAC48628.1| 3-demethylubiquinone-9 3-O-methyltransferase [Sinorhizobium
meliloti 1021]
Length = 264
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF + ++ G V I+S ++ ++
Sbjct: 52 VVPEDLEGRSVLDIGCNAGF----YAQEMKRRNAGRVLGIDSDPHYLRQAKFAAEQAGLD 107
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + +A + D++ + L P L
Sbjct: 108 IEYRLMSVYDAAGLRERFDLVIF-----MGVLYHLRHPLLA 143
>gi|298489513|ref|ZP_07007523.1| predicted methyltransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298155969|gb|EFH97079.1| predicted methyltransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 314
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
S +D+G G G ++ ++ + V ++ K F + + +
Sbjct: 136 SRAVDIGCGTGAGALLIAVARPQAQ---VYAVDINPKALHFAQTNARVAGLENMQCCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLTGNFDLIVA 206
>gi|284801516|ref|YP_003413381.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
08-5578]
gi|284994658|ref|YP_003416426.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
08-5923]
gi|284057078|gb|ADB68019.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
08-5578]
gi|284060125|gb|ADB71064.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
08-5923]
Length = 189
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I V IE ++ K
Sbjct: 22 SIDLLSLDEKSKKLLDVGAGTGSVGLQVACNFPKIH---VTAIERNPDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 79 GLENIAVIEAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 120
>gi|283769319|ref|ZP_06342219.1| methyltransferase small domain protein [Bulleidia extructa W1219]
gi|283104095|gb|EFC05478.1| methyltransferase small domain protein [Bulleidia extructa W1219]
Length = 197
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
HV ++ +D+G G G GI L+ + +++++ N+ R
Sbjct: 48 HVL--IQTLLQEDLSGKGLDMGCGVGAIGISI---LAEHKKVEMDMVDINNRALRLCRSN 102
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
V + + VF + T D I +
Sbjct: 103 VVRNGLKANVFLSDG--FKNIQETYDFIVS 130
>gi|163739818|ref|ZP_02147225.1| 30S ribosomal protein S15 [Phaeobacter gallaeciensis BS107]
gi|161386852|gb|EDQ11214.1| 30S ribosomal protein S15 [Phaeobacter gallaeciensis BS107]
Length = 539
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 15/93 (16%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH D + +LG G GF + + ++ V+ ++ + +
Sbjct: 37 RHGLD--------DSGLTYCELGCGQGFTANLLAAANPHVD---VHAMDFNPAHIAGAQR 85
Query: 117 VVQKTAARGKVFACR----IQEAPQMITTCDVI 145
+ Q+ A F R +E + + DVI
Sbjct: 86 LAQEAAVPNVTFYERSFEDFEEEANLPNSFDVI 118
>gi|153006076|ref|YP_001380401.1| type 12 methyltransferase [Anaeromyxobacter sp. Fw109-5]
gi|152029649|gb|ABS27417.1| Methyltransferase type 12 [Anaeromyxobacter sp. Fw109-5]
Length = 255
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF S++++ V ++S + + R + +
Sbjct: 52 VLPERLDGRTVLDIGCNAGF----FSLEMARRGAARVVGVDSDPRYLAQARLAAEVSGLD 107
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + ++ DV+ + L P L
Sbjct: 108 VEWRELSVYDVARLGEKFDVVLF-----MGVLYHLRHPLLA 143
>gi|192359208|ref|YP_001982421.1| modification methylase, HemK family [Cellvibrio japonicus Ueda107]
gi|190685373|gb|ACE83051.1| modification methylase, HemK family [Cellvibrio japonicus Ueda107]
Length = 302
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P +DL +G G GI + E V L + + +Q +
Sbjct: 123 WLIQSPERILDLCTGSGCIGIACAYMFPEAE---VQLSDISYDALAVAEQNIQMHGLEDR 179
Query: 127 VFACRIQEAPQMITT-CDVISA 147
VFA + M D+I +
Sbjct: 180 VFALQSDGFEHMQGQVFDLIVS 201
>gi|119386620|ref|YP_917675.1| methyltransferase type 11 [Paracoccus denitrificans PD1222]
gi|119377215|gb|ABL71979.1| Methyltransferase type 11 [Paracoccus denitrificans PD1222]
Length = 232
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 10/99 (10%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
DF RHV D+ + ++ +D+G G G + + EG I+
Sbjct: 20 EEGDFSRRHVLDAPMLARIRGRGFRNALDVGCGEGRFCRMLA-----AEGIAATGIDPTQ 74
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
K L + +G R + P D++ +
Sbjct: 75 K----LIETARSRDDKGSYVQARAEALPLPDAGFDLVVS 109
>gi|257485641|ref|ZP_05639682.1| HemK family modification methylase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|331011930|gb|EGH91986.1| HemK family modification methylase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 314
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
S +D+G G G ++ ++ + V ++ K F + + +
Sbjct: 136 SRAVDIGCGTGAGALLIAVARPQAQ---VYAVDINPKALHFAQTNARVAGLENMQCCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLTGNFDLIVA 206
>gi|49476827|ref|YP_039321.1| HemK family modification methylase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49328383|gb|AAT59029.1| modification methylase, HemK family [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 283
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ + V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKDLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|330986980|gb|EGH85083.1| HemK family modification methylase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 314
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
S +D+G G G ++ ++ + V ++ K F + + +
Sbjct: 136 SRAVDIGCGTGAGALLIAVARPQAQ---VYAVDINPKALHFAQTNARVAGLENMQCCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLTGNFDLIVA 206
>gi|320321800|gb|EFW77898.1| HemK family modification methylase [Pseudomonas syringae pv.
glycinea str. B076]
Length = 314
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
S +D+G G G ++ ++ + V ++ K F + + +
Sbjct: 136 SRAVDIGCGTGAGALLIAVARPQAQ---VYAVDINPKALHFAQTNARVAGLENMQCCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLTGNFDLIVA 206
>gi|242092008|ref|XP_002436494.1| hypothetical protein SORBIDRAFT_10g003690 [Sorghum bicolor]
gi|241914717|gb|EER87861.1| hypothetical protein SORBIDRAFT_10g003690 [Sorghum bicolor]
Length = 324
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 14/111 (12%)
Query: 42 KINLVSSSTVEDFWIRHVE---DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
+N S + RH +S + + ID+G GGG + G
Sbjct: 97 VMNPTRLSFIRSTLCRHFRRDPNSSKPLE----GLKVIDVGCGGGILSEPLARM-----G 147
Query: 99 GLVNLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V I++ +K K + + T A + +E + D + +
Sbjct: 148 ATVTGIDAVDKNIKIASIHAASDPTTASIEYCCATAEELVKEKRLFDAVIS 198
>gi|220929217|ref|YP_002506126.1| ribosomal protein L11 methyltransferase [Clostridium cellulolyticum
H10]
gi|254783296|sp|B8I303|PRMA_CLOCE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|219999545|gb|ACL76146.1| ribosomal protein L11 methyltransferase [Clostridium cellulolyticum
H10]
Length = 316
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + + + +D+G G G I SI + + V I+ R ++
Sbjct: 165 SILLDKYMKDDTEVLDIGCGTG----ILSIIAAKLGAKQVEAIDIDEVAVKVARENIELN 220
Query: 122 AARGKVFACRI--QEAPQMITTCDVISA 147
KV A + + D+I A
Sbjct: 221 QEITKVSARKAVLSDLKAEEHKYDIIVA 248
>gi|320331548|gb|EFW87488.1| HemK family modification methylase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330882032|gb|EGH16181.1| HemK family modification methylase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 314
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
S +D+G G G ++ ++ + V ++ K F + + +
Sbjct: 136 SRAVDIGCGTGAGALLIAVARPQAQ---VYAVDINPKALHFAQTNARVAGLENMQCCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLTGNFDLIVA 206
>gi|292493568|ref|YP_003529007.1| methyltransferase type 11 [Nitrosococcus halophilus Nc4]
gi|291582163|gb|ADE16620.1| Methyltransferase type 11 [Nitrosococcus halophilus Nc4]
Length = 231
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P P +DL G G + + + + V L E + R +QK +
Sbjct: 47 PNPRRILDLACGTGISTLAIANRYPDCQVVGVELREEY---LNIARRKIQKLGVNNIEWV 103
Query: 130 CRIQEAPQMITTCDVISA 147
E + D IS+
Sbjct: 104 LSRAEDYRSKEPFDCISS 121
>gi|255022847|ref|ZP_05294833.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
FSL J1-208]
Length = 189
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L+ +D+G+G G G+ + I+ V IE ++ K
Sbjct: 22 SIDLLNLNEASKKLLDVGAGTGSVGLQVACNFPKIQ---VTAIERNPDAVDLIKQNQVKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 79 GLENVAVTQAYAPIELPEKETFDAI----FIGGSGGNLTDIIDWSL 120
>gi|227113589|ref|ZP_03827245.1| putative methyltransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 257
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + IDLG G G I + ++ V + ++ + +
Sbjct: 38 LAALLAPFPQARVIDLGCGAGHASFIAAQAVAE-----VVSYDLSSQMLDVVSQAAAEKG 92
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+V + P ++ D+I +R
Sbjct: 93 LHNIRVQQGVAESLPFEDSSADIIISR 119
>gi|255069891|ref|XP_002507027.1| predicted protein [Micromonas sp. RCC299]
gi|226522302|gb|ACO68285.1| predicted protein [Micromonas sp. RCC299]
Length = 368
Score = 39.7 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQ 119
D++R+ +D+G+G G I +I + V +E+ + V
Sbjct: 39 DAVRLNPALFRGKTVLDVGTGSG----ILAIWAAQCGARKVYAVEATYMATHAKKLVEAN 94
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++E ++ DVI +
Sbjct: 95 GLGDVVTIIQSTVEEV-ELPEQVDVIIS 121
>gi|319942225|ref|ZP_08016541.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B]
gi|319804278|gb|EFW01170.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B]
Length = 276
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 51/145 (35%), Gaps = 20/145 (13%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHV--EDSL----------- 63
+ ++ + + + + + + L S ++F+ RH D++
Sbjct: 45 DEAELTEDQILQFDMLVDMRAAGTPVPYLTGS---QEFFGRHFHVTDAVLIPRPDTEVLV 101
Query: 64 -RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +DLG+G G GI ++ I G V ++ R + A
Sbjct: 102 EQALLVVAGNPKVLDLGTGSGCIGITLAL---EISGAQVTATDASEAALEIARGNAAELA 158
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A+ + +A + D+I +
Sbjct: 159 AKVEFREGFWWDALVPNSQFDLIVS 183
>gi|302774172|ref|XP_002970503.1| hypothetical protein SELMODRAFT_147057 [Selaginella moellendorffii]
gi|300162019|gb|EFJ28633.1| hypothetical protein SELMODRAFT_147057 [Selaginella moellendorffii]
Length = 215
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 6/92 (6%)
Query: 57 RHVE-DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH + D + L +D+G GGG + + + G ++ +E + A L
Sbjct: 15 RHFKKDPISPRPL--DGLTILDVGCGGGLLCEPLARMGAHVTG--IDAVEENIEVAK-LH 69
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
A ++ Q D+++A
Sbjct: 70 AAKDPLTATIVYQHTTAEQLVQEKQQFDIVAA 101
>gi|38605120|sp|O86951|PRMA_THENE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
Length = 264
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 12/102 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G G G I +I + V ++ + + VQK +
Sbjct: 121 LFLKKYLKKGDRVVDVGCGTG----ILAIVAKKLGASYVLAVDVDEQAVEVAKENVQKNS 176
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V + ++ D++ + + L E L
Sbjct: 177 VDVTVKRSDL--LSEVEGVFDLVVS------NILAEIHLRLL 210
>gi|322834524|ref|YP_004214551.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602]
gi|321169725|gb|ADW75424.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602]
Length = 348
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLH----PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R DS + ++ P +D+ G G + ++ ++ + L
Sbjct: 169 IKTLPGVFSREGLDSGSLLLINSFEEPVKGKVLDVACGAGVLASVLAMYSPKMK---ITL 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + G+V A + + D+I +
Sbjct: 226 SDVSAAAIEASRATLAANDLPGEVIASNV--YSDIAGRFDMIIS 267
>gi|289648530|ref|ZP_06479873.1| HemK family modification methylase [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 314
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
S +D+G G G ++ ++ + V ++ K F + + +
Sbjct: 136 SRAVDIGCGTGAGALLIAVARPQAQ---VYAVDINPKALHFAQTNARVAGLENMQCCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLTGNFDLIVA 206
>gi|71734702|ref|YP_277258.1| HemK family modification methylase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555255|gb|AAZ34466.1| modification methylase, HemK family [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 314
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
S +D+G G G ++ ++ + V ++ K F + + +
Sbjct: 136 SRAVDIGCGTGAGALLIAVARPQAQ---VYAVDINPKALHFAQTNARVAGLENMQCCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLTGNFDLIVA 206
>gi|308064266|gb|ADO06153.1| hypothetical protein HPSAT_07255 [Helicobacter pylori Sat464]
Length = 238
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E K +F
Sbjct: 20 DSLFLYDFSRPFIKNSDAILDIGSGCGVLGL---LCARDNPLASVHLVEKDGK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFKPPIL-YDAIVC 105
>gi|55820852|ref|YP_139294.1| hypothetical protein stu0800 [Streptococcus thermophilus LMG 18311]
gi|55822767|ref|YP_141208.1| hypothetical protein str0800 [Streptococcus thermophilus CNRZ1066]
gi|55736837|gb|AAV60479.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55738752|gb|AAV62393.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 213
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G I L+ ++G +I+ ++ + ++ +F
Sbjct: 72 LERGKNLLDVGCGYG----PLGISLAKVQGVQSTMIDINSRAIDLAKKNAERNGVVAHIF 127
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I + D I + RA
Sbjct: 128 QSNI--YENVSEKFDYIISNPPIRA 150
>gi|32476161|ref|NP_869155.1| SAM-dependent methyltransferase [Rhodopirellula baltica SH 1]
gi|32446705|emb|CAD76541.1| conserved hypothetical protein-putative SAM-dependent
methyltransferase [Rhodopirellula baltica SH 1]
Length = 530
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
P ++L G G I + L + ++L K + ++ K ++
Sbjct: 66 PESCRVLELACGPGGNLISLATLLPNSHFEGIDLAAGHVKTGN---SMIGKLGLSNIQLH 122
Query: 129 ACRIQ----EAPQMITTCDVISA 147
RI+ EA D I A
Sbjct: 123 HGRIEDWVTEADSDEERFDYIIA 145
>gi|302185806|ref|ZP_07262479.1| hypothetical protein Psyrps6_05655 [Pseudomonas syringae pv.
syringae 642]
Length = 315
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ +D+G G G ++ ++ + V+ ++ K F + + +
Sbjct: 136 NRAVDIGCGTGAGAMLIAVARPQAQ---VHAVDINPKALHFAQTNAAVAGLKNMECCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLSGNFDLIVA 206
>gi|124485543|ref|YP_001030159.1| hypothetical protein Mlab_0720 [Methanocorpusculum labreanum Z]
gi|124363084|gb|ABN06892.1| Methyltransferase type 11 [Methanocorpusculum labreanum Z]
Length = 234
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 20/118 (16%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ +FW R + P I++G+G G I ++ L+ + G V I
Sbjct: 24 RITDEIEFWERIF------TPIIPAGKHLNVIEVGTGPG----ILALALAKM-GHTVTGI 72
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + + +K + + D+I + L ++ P
Sbjct: 73 DLSPEMVKKAQANAEKLGITAAFREGDAENLDLDAGSADLIIS-------KYLMWTLP 123
>gi|66048324|ref|YP_238165.1| hypothetical protein Psyr_5100 [Pseudomonas syringae pv. syringae
B728a]
gi|63259031|gb|AAY40127.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
gi|330970293|gb|EGH70359.1| hypothetical protein PSYAR_07359 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 315
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ +D+G G G ++ ++ + V+ ++ K F + + +
Sbjct: 136 NRAVDIGCGTGAGAMLIAVARPQAQ---VHAVDINPKALHFAQTNAAVAGLKNMECCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLSGNFDLIVA 206
>gi|327194785|gb|EGE61626.1| putative SAM-dependent methyltransferase protein [Rhizobium etli
CNPAF512]
Length = 248
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+V +D+G GF S+++ G V I+S + ++T
Sbjct: 47 QVVPEDLCGCSVLDIGCNAGF----YSLEMKRRNAGRVVGIDSDPHYLRQAEFAARQTGE 102
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + E ++ D++ + L P L
Sbjct: 103 DIEFKLMSVYEVEKLKERFDLVLF-----MGVLYHLRHPLLA 139
>gi|304385308|ref|ZP_07367653.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici
DSM 20284]
gi|304328515|gb|EFL95736.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici
DSM 20284]
Length = 285
Score = 39.7 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 12/105 (11%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ H+ + P +D+G+G G I ++ + V++
Sbjct: 92 LIPRVETEELVE-HILN---AHPQLNQPLRVLDIGTGSGNIAITLKLERPDWQVTAVDIA 147
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI--TTCDVISA 147
+ L Q + V R + D+I +
Sbjct: 148 ------SEALAVAQQNAHQQEAVVDFRQGSLFDAVKGERFDIIVS 186
>gi|308190291|ref|YP_003923222.1| protoporphyrinogen oxidase [Mycoplasma fermentans JER]
gi|307625033|gb|ADN69338.1| protoporphyrinogen oxidase [Mycoplasma fermentans JER]
Length = 237
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 19/151 (12%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINL-----VSSSTVEDFWI 56
+Y I Y L N ++ + + + +INL + E+
Sbjct: 13 RYGLEPKITEKEYELLRQNYP---IQLIMGYVEYL---NTRINLREQVLIPRYETEEMVD 66
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ + + +DL G GF G+ L S + LV++ + K+
Sbjct: 67 ------IYLKKFAAENQEVLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTIENSI 120
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V K++ + + DVI +
Sbjct: 121 VNFGFNHDLKIYQSDL--FTNVKGRFDVIIS 149
>gi|261250290|ref|ZP_05942866.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
CIP 102891]
gi|260939406|gb|EEX95392.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
CIP 102891]
Length = 340
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 9/106 (8%)
Query: 45 LVSSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
L ++ + D S + P +D G G G G + +I IE +
Sbjct: 172 LT-IKSLPGVFSHGEFDIGSKLLLDTLPALSGKVLDFGCGAGVIGSVMAILNPEIE---L 227
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + G+VFA I I +
Sbjct: 228 EMCDISALAVESSKATLAANGLSGRVFASDI--YSDTSNDYHFIIS 271
>gi|73667863|ref|YP_303878.1| putative methyltransferase [Methanosarcina barkeri str. Fusaro]
gi|72395025|gb|AAZ69298.1| putative methyltransferase [Methanosarcina barkeri str. Fusaro]
Length = 211
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 52 EDFWIRHV-EDSLRVFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV-NLIESKN 108
++ I H S + ++ S+ +D+G GGG ++ + + + N
Sbjct: 24 DEMNISHYELTSWGLGKIDIKQDSVILDIGCGGGRTVNRLALLAPEGKVFGIDYSNDCVN 83
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
F + ++ + ++ +++ P D+ A
Sbjct: 84 WSIEFNKELIDS--GKVEIHHASVEKIPFEDNKFDLALA 120
>gi|328886401|emb|CCA59640.1| hypothetical protein SVEN_6354 [Streptomyces venezuelae ATCC 10712]
Length = 357
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 1/85 (1%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L P +D+GSG G + + E V+ +A +
Sbjct: 107 LGTLAPVPGVRRILDVGSGPGVVTSVLARAFPEAEAVAVDGTPELLTRAREYAEA-RGLG 165
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
R + E + D+I A
Sbjct: 166 GRVSTLHAELPEGIATLGRADIIWA 190
>gi|55820226|ref|YP_138668.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
thermophilus LMG 18311]
gi|55736211|gb|AAV59853.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
thermophilus LMG 18311]
Length = 399
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+GSG G IIT+ Q +E + L E + +F
Sbjct: 159 VHHILDKL----HSEPGKKLLDIGSGWGT-LIITAAQEYGLETYGITLSEE---QYAFTN 210
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+Q+ + KV +++ + T D I++
Sbjct: 211 QRIQELGLQDKVHVM-LRDYRDVDMTFDYITS 241
>gi|55822117|ref|YP_140558.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
thermophilus CNRZ1066]
gi|55738102|gb|AAV61743.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
thermophilus CNRZ1066]
Length = 399
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+GSG G IIT+ Q +E + L E + +F
Sbjct: 159 VHHILDKL----HSEPGKKLLDIGSGWGT-LIITAAQEYGLETYGITLSEE---QYAFTN 210
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+Q+ + KV +++ + T D I++
Sbjct: 211 QRIQELGLQDKVHVM-LRDYRDVDMTFDYITS 241
>gi|88601558|ref|YP_501736.1| ribosomal RNA adenine dimethylase [Methanospirillum hungatei JF-1]
gi|88187020|gb|ABD40017.1| ribosomal RNA adenine dimethylase [Methanospirillum hungatei JF-1]
Length = 278
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 11/90 (12%)
Query: 64 RVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+V P + S +D+G+G G + V IE ++ + +
Sbjct: 50 QVLSRLPITHESRILDIGAGPGTLAFPFA-----ERAAHVTAIEPSPGMIEVMKDQIAEL 104
Query: 122 AARG-KVFACRIQEA---PQMITTCDVISA 147
+ R ++ + D+I A
Sbjct: 105 QVHNLTIVPKRWEDVDPSSDLTERFDIIVA 134
>gi|157147620|ref|YP_001454940.1| 16S ribosomal RNA m2G1207 methyltransferase [Citrobacter koseri
ATCC BAA-895]
gi|226712936|sp|A8ALZ1|RSMC_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|157084825|gb|ABV14503.1| hypothetical protein CKO_03420 [Citrobacter koseri ATCC BAA-895]
Length = 342
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 39 WSK-KIN-LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQ 92
W + +IN L T+ + R D S L + L P+ +D+G G G +
Sbjct: 159 WGEYRINDLT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASH 217
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + L + R + G+VFA + + D+I +
Sbjct: 218 SPKVR---LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSDVKGRFDMIIS 267
>gi|145633431|ref|ZP_01789161.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
3655]
gi|144985994|gb|EDJ92596.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
3655]
Length = 330
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 17/100 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + + + + + + + R + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSMIKKRAPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA------------RALADLDTLLEY 159
+ + D+I + RA+ +L T ++
Sbjct: 248 V--FSNIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKW 285
>gi|238810251|dbj|BAH70041.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 241
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 19/151 (12%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINL-----VSSSTVEDFWI 56
+Y I Y L N ++ + + + +INL + E+
Sbjct: 17 RYGLEPKITEKEYELLRQNYP---IQLIMGYVEYL---NTRINLREQVLIPRYETEEMVD 70
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ + + +DL G GF G+ L S + LV++ + K+
Sbjct: 71 ------IYLKEFAAENQEVLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTIENSI 124
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V K++ + + DVI +
Sbjct: 125 VNFGFNHDLKIYQSDL--FTNVKGRFDVIIS 153
>gi|254413900|ref|ZP_05027669.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC
7420]
gi|196179497|gb|EDX74492.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC
7420]
Length = 292
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 17/102 (16%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS-----IEGGLVNLIE 105
+ W+R + ++ P +DLG G G ++ ++ L+
Sbjct: 84 PNETWVRQEL----INRIQGTPRRILDLGCGTGSTTLLLKQAFPEAEVIGLDLSPYMLVM 139
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ K + + + +E + D+++A
Sbjct: 140 AERK--------AKAAGVEIQWRHGKAEETGLPEASFDLVTA 173
>gi|124485153|ref|YP_001029769.1| hypothetical protein Mlab_0326 [Methanocorpusculum labreanum Z]
gi|124362694|gb|ABN06502.1| Methyltransferase type 12 [Methanocorpusculum labreanum Z]
Length = 276
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 13/95 (13%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H++D L+ P S +D+G+G G + + EG +V ++E +
Sbjct: 48 HIQDQLQSLAF-PPGSTVLDIGAGPGTLAVPLT-----KEGHIVTVVEPSKAMKDAMEQY 101
Query: 118 VQKTAARGKVFACRIQEA-----PQMITTCDVISA 147
Q + + RI++ P I T D + +
Sbjct: 102 KQYCGVKADIP--RIEKLWENVDPAEIGTYDYVIS 134
>gi|170729229|ref|YP_001763255.1| ubiquinone biosynthesis O-methyltransferase [Shewanella woodyi ATCC
51908]
gi|169814576|gb|ACA89160.1| ubiquinone biosynthesis O-methyltransferase [Shewanella woodyi ATCC
51908]
Length = 270
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 22/124 (17%)
Query: 22 SRETLEKLEYFYFLFLKWSK---------KINLVSSSTVEDFWIRHV-EDSLRVFQLHPY 71
S E + K + +W NL + ++ H D + Q P+
Sbjct: 18 SHEEIAKFDALAE---EWRDPQGKFKHVLAFNLTRLTAIQMMIAEHFKRD---LTQDIPF 71
Query: 72 PS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G S +G V I++ R +K C
Sbjct: 72 NDLTMLDIGCGVGLLCEPLS-----KQGAHVTGIDASCYNIDLARQHAEKNNININYQHC 126
Query: 131 RIQE 134
++
Sbjct: 127 LAED 130
>gi|127514783|ref|YP_001095980.1| ubiquinone biosynthesis O-methyltransferase [Shewanella loihica
PV-4]
gi|126640078|gb|ABO25721.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella loihica
PV-4]
Length = 260
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 23/146 (15%)
Query: 11 RANYLLNTYNVSRETLEKLEYFYFLFLKWS------KKI---NLVSSSTVEDFWIRHVE- 60
R + + S+ + K + +W K + N + +ED H
Sbjct: 6 RLSRFKTQID-SQTEIAKFDALAK---EWRDPHGKFKHVLSFNQTRLTAIEDQIASHFGR 61
Query: 61 DSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D + Q P+ +D+G G G + +G V I++ +
Sbjct: 62 D---LTQDIPFDGLSLLDIGCGVGLLCEPLA-----SQGARVTGIDASEHNITLAHRHAN 113
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+ + C + P+ DVI
Sbjct: 114 SWSIPIEYRHCLAGDLPREQPQYDVI 139
>gi|302389475|ref|YP_003825296.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase
[Thermosediminibacter oceani DSM 16646]
gi|302200103|gb|ADL07673.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase
[Thermosediminibacter oceani DSM 16646]
Length = 314
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + ID+G G G I SI + + G V I+ R +++
Sbjct: 166 LEKYIEGGETVIDVGCGSG----ILSIAAAKLGAGKVLAIDKDEVAVKVARENIKRNDTT 221
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
V + + + D+I A
Sbjct: 222 QAVEVIKGEGLDCVDAKADIIVA 244
>gi|309355713|emb|CAP38290.2| CBR-COQ-3 protein [Caenorhabditis briggsae AF16]
Length = 262
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 43/135 (31%), Gaps = 37/135 (27%)
Query: 58 HVEDSL------RVFQLHPYP----SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
H SL + +D+GSGGG I + G V I++
Sbjct: 46 HALHSLNRIRVPWIVDNVKKGDTTSKRLVDVGSGGGLLSIPLA-----RSGFDVTGIDAT 100
Query: 108 NKKASFLRYVVQKTAA-------RGKVFACRIQ---EAPQMITTCDVISARA------LA 151
+ R +Q R + ++ + P+ + D + A +A
Sbjct: 101 KQAVDAARLSLQSAPLQRSRITERLRFEHMSVENFCQKPENKSAFDGVV--ASEIVEHVA 158
Query: 152 DLD----TLLEYSFP 162
DL +L E + P
Sbjct: 159 DLPGFIGSLAELARP 173
>gi|115351628|ref|YP_773467.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Burkholderia
ambifaria AMMD]
gi|115281616|gb|ABI87133.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia ambifaria AMMD]
Length = 411
Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S + IES ++ F+ +
Sbjct: 239 LTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQTIA---IESHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R A + D I
Sbjct: 296 GVPGLQLVAGRAPHALAGLAAPDAI 320
>gi|238606603|ref|XP_002396759.1| hypothetical protein MPER_02942 [Moniliophthora perniciosa FA553]
gi|215469916|gb|EEB97689.1| hypothetical protein MPER_02942 [Moniliophthora perniciosa FA553]
Length = 234
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
++H+ LR+ P +++GSG G I+ + + + L ++ K + R
Sbjct: 4 LKHIISVLRIPPSSNTPFRVLEIGSGWGSLSILLAQTYPHVHINTLTL-STQQKSLAEER 62
Query: 116 YVVQKTAARGKVFACRIQEAPQMITT-CDVISA 147
+ Q R V + P+ D + +
Sbjct: 63 ILAQGLQDRITVHLMDYRSMPKEWEGVFDRVVS 95
>gi|302537954|ref|ZP_07290296.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302446849|gb|EFL18665.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 416
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 18/117 (15%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH+ L + P +DLG G G ++ + + V ++ LR
Sbjct: 18 TRHL---LFLCGPLPERPRVLDLGCGPGRSALLLAAEAGGAGLAEVTAVDLYEPFLDELR 74
Query: 116 YVVQKTAARGKVFACRIQ-----EAPQMITTCDVISA----------RALADLDTLL 157
++ G+V R + D++ A RALA+ LL
Sbjct: 75 AAARERGLEGRVRTVRADMGALPSEGFEDGSFDLVWAEGSAFVLGFDRALAEWRRLL 131
>gi|330976371|gb|EGH76428.1| hypothetical protein PSYAP_06959 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 315
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ +D+G G G ++ ++ + V+ ++ K F + + +
Sbjct: 136 NRAVDIGCGTGAGAMLIAVARPQAQ---VHAVDINPKALHFAQTNATVAGLKNMECCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + + D+I A
Sbjct: 193 I--LSGLSGSFDLIVA 206
>gi|319740459|gb|ADV60523.1| arg methyltransferase [Hyles lineata]
Length = 244
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G G G I S+ + E V +E N + R +V+ G
Sbjct: 18 KHLFKGKVVLDIGCGTG----ILSMFAAKAEAAKVIAVECSN-IVDYARKIVEANGLSGV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIIKGKVEEVELPVDKVDIIIS 95
>gi|294817231|ref|ZP_06775873.1| Methyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|294322046|gb|EFG04181.1| Methyltransferase [Streptomyces clavuligerus ATCC 27064]
Length = 283
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 12/103 (11%)
Query: 63 LRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P +D+G G G PG+ + + G V I ++ +
Sbjct: 55 LLIGKLAPGPGERVLDVGCGVGVPGLRLA----ELTGADVLGISVNREQVHEANRRAGEA 110
Query: 122 AA--RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R + + P + D + A L+ + P
Sbjct: 111 GLQERARFAYADAMDLPHPDASFDAVFA-----LEVFVHLDRP 148
>gi|268534952|ref|XP_002632609.1| C. briggsae CBR-COQ-3 protein [Caenorhabditis briggsae]
Length = 255
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 43/135 (31%), Gaps = 37/135 (27%)
Query: 58 HVEDSL------RVFQLHPYP----SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
H SL + +D+GSGGG I + G V I++
Sbjct: 40 HALHSLNRIRVPWIVDNVKKGDTTSKRLVDVGSGGGLLSIPLA-----RSGFDVTGIDAT 94
Query: 108 NKKASFLRYVVQKTAA-------RGKVFACRIQ---EAPQMITTCDVISARA------LA 151
+ R +Q R + ++ + P+ + D + A +A
Sbjct: 95 KQAVDAARLSLQSAPLQRSRITERLRFEHMSVENFCQKPENKSAFDGVV--ASEIVEHVA 152
Query: 152 DLD----TLLEYSFP 162
DL +L E + P
Sbjct: 153 DLPGFIGSLAELARP 167
>gi|240139009|ref|YP_002963484.1| hypothetical protein MexAM1_META1p2426 [Methylobacterium extorquens
AM1]
gi|240008981|gb|ACS40207.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 341
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
HP P D+G G G GI+ + +L E V L++ R + +
Sbjct: 156 HPAPRRAADIGCGSGAAGILVAKRLPEAE---VVLVDINPAALRAARINARLAGVGNVRP 212
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + + D+I +
Sbjct: 213 VHSDM--LSNVEGSFDLIVS 230
>gi|329123327|ref|ZP_08251892.1| methyltransferase domain protein [Haemophilus aegyptius ATCC 11116]
gi|327471327|gb|EGF16779.1| methyltransferase domain protein [Haemophilus aegyptius ATCC 11116]
Length = 167
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKLGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|319777685|ref|YP_004137336.1| protoporphyrinogen oxidase [Mycoplasma fermentans M64]
gi|318038760|gb|ADV34959.1| Protoporphyrinogen oxidase [Mycoplasma fermentans M64]
Length = 237
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 19/151 (12%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINL-----VSSSTVEDFWI 56
+Y I Y L N ++ + + + +INL + E+
Sbjct: 13 RYGLEPKITEKEYELLRQNYP---IQLIMGYVEYL---NTRINLREQVLIPRYETEEMVD 66
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ + + +DL G GF G+ L S + LV++ + K+
Sbjct: 67 ------IYLKEFAAENQEVLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTIENSI 120
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V K++ + + DVI +
Sbjct: 121 VNFGFNHDLKIYQSDL--FTNVKGRFDVIIS 149
>gi|224122474|ref|XP_002330490.1| arginine methyltransferease [Populus trichocarpa]
gi|222872424|gb|EEF09555.1| arginine methyltransferease [Populus trichocarpa]
Length = 377
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G+G G I S+ + V +E + A+ + +V+
Sbjct: 90 KFLFKDKVVLDVGAGTG----ILSLFCAKAGAAHVYAVECSHM-ANMAKEIVESNGYSNV 144
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E + D+I +
Sbjct: 145 ITVLKGKIEEIELPVAKVDIIIS 167
>gi|118487693|gb|ABK95671.1| unknown [Populus trichocarpa]
Length = 384
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G+G G I S+ + V +E + A+ + +V+
Sbjct: 97 KFLFKDKVVLDVGAGTG----ILSLFCAKAGAAHVYAVECSHM-ANMAKEIVESNGYSNV 151
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E + D+I +
Sbjct: 152 ITVLKGKIEEIELPVAKVDIIIS 174
>gi|42784500|ref|NP_981747.1| HemK family modification methylase [Bacillus cereus ATCC 10987]
gi|42740432|gb|AAS44355.1| modification methylase, HemK family [Bacillus cereus ATCC 10987]
Length = 283
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 QENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|15644412|ref|NP_229464.1| hypothetical protein TM1664 [Thermotoga maritima MSB8]
gi|4982239|gb|AAD36731.1|AE001808_6 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 210
Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +DLG G G GI+ + +E V + + + F + +
Sbjct: 60 HGKKVLDLGCGYGVIGIVLKKEYPDLE---VYMSDINKRAVEFAKINAKD---HNVEVDI 113
Query: 131 RIQEAPQMIT--TCDVISA 147
R + D+I
Sbjct: 114 RWGNLYEPWEDMKFDMIVC 132
>gi|145636784|ref|ZP_01792450.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittHH]
gi|148825706|ref|YP_001290459.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittEE]
gi|229846931|ref|ZP_04467037.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
7P49H1]
gi|226712955|sp|A5UBC5|RSMC_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|145270082|gb|EDK10019.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittHH]
gi|148715866|gb|ABQ98076.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittEE]
gi|229810015|gb|EEP45735.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
7P49H1]
Length = 330
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 17/100 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + ++ + + + + + R + + +GKV+A
Sbjct: 191 KGKVLDLGCGAGVIGSMIKKRVPNAQ---ITMTDIHAMALESARKTLSENQLQGKVYASD 247
Query: 132 IQEAPQMITTCDVISA------------RALADLDTLLEY 159
+ + D+I + RA+ +L T ++
Sbjct: 248 V--FSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKW 285
>gi|313898203|ref|ZP_07831741.1| methyltransferase small domain protein [Clostridium sp. HGF2]
gi|312956967|gb|EFR38597.1| methyltransferase small domain protein [Clostridium sp. HGF2]
Length = 203
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G G G GI+T + V +++ + R +K +
Sbjct: 60 GNQLLDMGCGYGVVGIVTKKAWPDKQ---VEMVDVNPRAVELARDNAEKNNIEANIHVSD 116
Query: 132 IQEAPQMITTCDVIS---ARA 149
+ E T D+I+ RA
Sbjct: 117 VYEQVSGNTFTDIITNPPIRA 137
>gi|310644213|ref|YP_003948972.1| methyltransferase small [Paenibacillus polymyxa SC2]
gi|309249164|gb|ADO58731.1| Methyltransferase small [Paenibacillus polymyxa SC2]
Length = 204
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +D+G G G G+ + + G V +++ + ++ +
Sbjct: 55 LPTNASVLDVGCGYGPIGLTAATLVPD---GHVTMVDINERAVQLAIENAERNGIKNVTI 111
Query: 129 ACRIQEAPQMITTCDVI 145
A DVI
Sbjct: 112 KQSDLFAEVQHERFDVI 128
>gi|307353682|ref|YP_003894733.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
gi|307156915|gb|ADN36295.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
Length = 250
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 12/91 (13%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + + +D+G G G + + S +L + FL V +K
Sbjct: 29 SL-IGEPPEGGGEILDVGCGKGVQTMALARLCPSCRITATDLYQP------FLDVVDEKI 81
Query: 122 ---AARGKVFACRI--QEAPQMITTCDVISA 147
G+V R + P + D+I A
Sbjct: 82 ASGGLSGRVKTVRASMHDLPFEEESFDIIWA 112
>gi|145629135|ref|ZP_01784934.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
22.1-21]
gi|145639699|ref|ZP_01795302.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittII]
gi|260582074|ref|ZP_05849869.1| 16S ribosomal RNA methyltransferase [Haemophilus influenzae NT127]
gi|144978638|gb|EDJ88361.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
22.1-21]
gi|145271256|gb|EDK11170.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittII]
gi|260094964|gb|EEW78857.1| 16S ribosomal RNA methyltransferase [Haemophilus influenzae NT127]
gi|309750669|gb|ADO80653.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae R2866]
Length = 330
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + + + + + + R + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSMIKKCSPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ +L
Sbjct: 248 V--FSDVQGKFDLIISNPPFHDGIDTAYRAVKEL 279
>gi|329940440|ref|ZP_08289721.1| putative O-methyltransferase [Streptomyces griseoaurantiacus M045]
gi|329300501|gb|EGG44398.1| putative O-methyltransferase [Streptomyces griseoaurantiacus M045]
Length = 475
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ QL ++DLGSG PGI ++ + G +E + F + + +
Sbjct: 186 LQCLQL-DCGQRFLDLGSG---PGISLALAAAITGPGRATGVERDPHMSVFAQRNLDRLG 241
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
V D I
Sbjct: 242 LGATVVEGDALNGHATGAPYDRI 264
>gi|261337500|ref|ZP_05965384.1| putative methyltransferase small domain protein [Bifidobacterium
gallicum DSM 20093]
gi|270277897|gb|EFA23751.1| putative methyltransferase small domain protein [Bifidobacterium
gallicum DSM 20093]
Length = 218
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 16/96 (16%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+RH P ++DLGSG G + ++ V ++ +
Sbjct: 62 QVLLRH-------APDLPETGTFLDLGSGWGPIALAMALDAPDAR---VYAVDVNERSID 111
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
R Q + A Q+ P DV AR
Sbjct: 112 LTRENAQANGCAN-IVAGTAQDVPD-----DVRFAR 141
>gi|15643837|ref|NP_228885.1| ribosomal protein L11 methyltransferase, putative [Thermotoga
maritima MSB8]
gi|38605526|sp|Q9X0G8|PRMA_THEMA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|4981624|gb|AAD36156.1|AE001768_5 ribosomal protein L11 methyltransferase, putative [Thermotoga
maritima MSB8]
Length = 264
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + + +D+G G G I +I + V ++ + V+K
Sbjct: 123 LKKYLKEGNTVLDVGCGTG----ILAIAAKKLGASRVVAVDVDEQAVEVAEENVRKNDVD 178
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
V + ++ T D++ +
Sbjct: 179 VLVKWSDL--LSEVEGTFDIVVS 199
>gi|254388299|ref|ZP_05003535.1| NigE [Streptomyces clavuligerus ATCC 27064]
gi|197702022|gb|EDY47834.1| NigE [Streptomyces clavuligerus ATCC 27064]
Length = 278
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 12/103 (11%)
Query: 63 LRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P +D+G G G PG+ + + G V I ++ +
Sbjct: 50 LLIGKLAPGPGERVLDVGCGVGVPGLRLA----ELTGADVLGISVNREQVHEANRRAGEA 105
Query: 122 AA--RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R + + P + D + A L+ + P
Sbjct: 106 GLQERARFAYADAMDLPHPDASFDAVFA-----LEVFVHLDRP 143
>gi|148270786|ref|YP_001245246.1| ribosomal L11 methyltransferase [Thermotoga petrophila RKU-1]
gi|281413091|ref|YP_003347170.1| ribosomal L11 methyltransferase [Thermotoga naphthophila RKU-10]
gi|166223499|sp|A5IN97|PRMA_THEP1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|147736330|gb|ABQ47670.1| LSU ribosomal protein L11P methyltransferase [Thermotoga petrophila
RKU-1]
gi|281374194|gb|ADA67756.1| ribosomal L11 methyltransferase [Thermotoga naphthophila RKU-10]
Length = 264
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 6/83 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + + +D+G G G I +I + V ++ + V+K
Sbjct: 123 LKKYLKEGNTVLDVGCGTG----ILAIAAKKLGASQVVAVDVDEQAVEVAEENVRKNDVD 178
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
V + ++ T D++ +
Sbjct: 179 VLVKWSDL--LSEVEGTFDIVVS 199
>gi|107026560|ref|YP_624071.1| methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
gi|116692250|ref|YP_837783.1| methyltransferase type 11 [Burkholderia cenocepacia HI2424]
gi|105895934|gb|ABF79098.1| Methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
gi|116650250|gb|ABK10890.1| Methyltransferase type 11 [Burkholderia cenocepacia HI2424]
Length = 282
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 31/102 (30%), Gaps = 13/102 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G G G + +I I+ + R ++
Sbjct: 40 LAEAAAASFATRVLDVGCGTG--AVTLAIARRLGASAQCTGIDISARMIDAARARAERGG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISA-----------RALADL 153
+ +Q + D+I + RA A+L
Sbjct: 98 VPARFVCADVQTHAFEPASVDLIVSRLGVMFFDDPVRAFANL 139
>gi|319942739|ref|ZP_08017044.1| hypothetical protein HMPREF9464_02263 [Sutterella wadsworthensis
3_1_45B]
gi|319803681|gb|EFW00625.1| hypothetical protein HMPREF9464_02263 [Sutterella wadsworthensis
3_1_45B]
Length = 246
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 18/116 (15%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ +E+ + P +D+G+G GF + S G V I+
Sbjct: 32 ARRWLEEIVPK------LPESADNKPLRVLDVGAGTGFFTFLLSPL-----GHEVVGIDL 80
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + + + + F + + D + +R +L ++ P
Sbjct: 81 TPAMIAKAKELARHLNISAEFFVMDAEAPSFAPGSFDAVISR---NLT----WTLP 129
>gi|20090115|ref|NP_616190.1| hypothetical protein MA1251 [Methanosarcina acetivorans C2A]
gi|19915094|gb|AAM04670.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 286
Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 12/95 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L +++G+G G I + + G V+L E+ +KA+ ++ +
Sbjct: 87 LTDKKVRAVEVGTGPGILAISLAAMGHDVTG--VDLSENMLEKAA---ANAREKGVNVLL 141
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
++ P D + L L ++ P
Sbjct: 142 MRGDAEDIPLKDGEYDFV-------LSKYLLWTLP 169
>gi|319955750|ref|YP_004167017.1| protein-(glutamine-n5) methyltransferase, release factor-specific
[Cellulophaga algicola DSM 14237]
gi|319424410|gb|ADV51519.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Cellulophaga algicola DSM 14237]
Length = 283
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G G I + + V ++ K + + + I
Sbjct: 117 KILDIGTGSGCIPISLA---KHLPNSKVYTLDVSGKAIAVAKQNARLNKVAIDFIQESIL 173
Query: 134 EAPQMITTCDVISA 147
+ + D+I +
Sbjct: 174 DIETLQEEFDIIVS 187
>gi|315223720|ref|ZP_07865570.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea
F0287]
gi|314946295|gb|EFS98294.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea
F0287]
Length = 281
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 9/88 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+ + +D+G+G G I + L + +++ E K+ + L VV
Sbjct: 106 LQEYPDKSEKIKILDVGTGSGCIAISLAKALPNAVVTAIDVSEGALKVAKRNAELNNVV- 164
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
I + D+I +
Sbjct: 165 -----THFLQQDILRIETLPDKYDIIIS 187
>gi|307323320|ref|ZP_07602530.1| Methyltransferase type 11 [Streptomyces violaceusniger Tu 4113]
gi|306890809|gb|EFN21785.1| Methyltransferase type 11 [Streptomyces violaceusniger Tu 4113]
Length = 229
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 36/113 (31%), Gaps = 16/113 (14%)
Query: 46 VSSSTVEDFWIRHV---------EDSLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSS 95
+ + E FW RH + L P P +DLG G G I +
Sbjct: 18 TADADAEQFWERHYGTRRAWPAHVNPLLAETAAPLRPGAALDLGCGPGGDAIWLA----- 72
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI-TTCDVISA 147
+G V ++ +R + +V + A D++SA
Sbjct: 73 QQGWHVTAVDISTTAVERVRERARDLGVADRVVTEQHDLASSFPAGQFDLVSA 125
>gi|307109859|gb|EFN58096.1| hypothetical protein CHLNCDRAFT_142415 [Chlorella variabilis]
Length = 163
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G+G G I +I + V +E+ + A F + +V V +
Sbjct: 67 GKVVLDVGTGSG----ILAIFAARAGAKKVYAVEATDM-AKFAKRLVAAQGLEATVEVIQ 121
Query: 132 -IQEAPQMITTCDVISA 147
+ E+ ++ D+I +
Sbjct: 122 GVIESVEIPEKVDIIIS 138
>gi|111023032|ref|YP_706004.1| hypothetical protein RHA1_ro06069 [Rhodococcus jostii RHA1]
gi|110822562|gb|ABG97846.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 274
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DLGS GF + + + G V + + L V + + C
Sbjct: 128 GSVLDLGSCFGF--LPLRLARA---GRSVTATDILPGTMTLLDAVTPELGLDLRTLVCDA 182
Query: 133 QEAPQMITTCDVISA 147
P + D ++A
Sbjct: 183 AHVPVPDNSADTVTA 197
>gi|256828413|ref|YP_003157141.1| type 11 methyltransferase [Desulfomicrobium baculatum DSM 4028]
gi|256577589|gb|ACU88725.1| Methyltransferase type 11 [Desulfomicrobium baculatum DSM 4028]
Length = 236
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 11/93 (11%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI--EGGLVNLIESKNKKASFLRY 116
+ D L P + +DLG G G + + L E ++ +
Sbjct: 26 ILDELLTRIDLPANARVLDLGCGMGLTSMALAKGYGCTVTAADLWIPAEDNARRFA---- 81
Query: 117 VVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
+ G+V C + P + D++ +
Sbjct: 82 ---EAGLSGRVTAVHCEARALPFEPESFDIVVS 111
>gi|255659182|ref|ZP_05404591.1| putative SAM-dependent methyltransferase [Mitsuokella multacida DSM
20544]
gi|260848633|gb|EEX68640.1| putative SAM-dependent methyltransferase [Mitsuokella multacida DSM
20544]
Length = 257
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 12/93 (12%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G GF ++ + G V ++ K R + Q
Sbjct: 68 SILDIGTGAGFFPLLLAPL-----GHEVIGVDLSEKMVQEARKNCLAAGVPARFRKMDAQ 122
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ DVI +R +L ++ P + +
Sbjct: 123 ALDFADESFDVILSR---NLT----WTLPDVME 148
>gi|57505402|ref|ZP_00371330.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
gi|57016227|gb|EAL53013.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
Length = 237
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 61 DSLRVFQLHPYPS----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL + +D+G+G G GI+ ++++ ++L+E + + ++
Sbjct: 18 DSLLLSAFILEDKLSQKTLLDVGAGCGIIGILLKSFNTNLK---LSLLELQKENIMLIQE 74
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ ++ +E D I
Sbjct: 75 NLKQNNFEAEILHKDFKEFKNEK-RFDCIVC 104
>gi|259481155|tpe|CBF74424.1| TPA: RmtA [Source:UniProtKB/TrEMBL;Acc:Q5VLE3] [Aspergillus
nidulans FGSC A4]
Length = 345
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 41 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 96
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V A + + +++E + D+I +
Sbjct: 97 EKAREI-VAVNGLADKITLLQGKMEEVQLPFPSVDIIIS 134
>gi|188580522|ref|YP_001923967.1| methyltransferase type 12 [Methylobacterium populi BJ001]
gi|179344020|gb|ACB79432.1| Methyltransferase type 12 [Methylobacterium populi BJ001]
Length = 254
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+D+G GF S+++ V ++S + + R+V ++
Sbjct: 46 AHALPADLTGKSVLDIGCNAGF----YSVEMKRRGAARVLGLDSDERYLAQGRFVAERLG 101
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + ++ DV+ + P L
Sbjct: 102 HDIEFRNLSVYDVGRLGERFDVVIF-----MGVFYHLRHPLLA 139
>gi|33304622|gb|AAQ02691.1| RmtA [Emericella nidulans]
Length = 345
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 41 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 96
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V A + + +++E + D+I +
Sbjct: 97 EKAREI-VAVNGLADKITLLQGKMEEVQLPFPSVDIIIS 134
>gi|317151857|ref|YP_004119905.1| methyltransferase small [Desulfovibrio aespoeensis Aspo-2]
gi|316942108|gb|ADU61159.1| methyltransferase small [Desulfovibrio aespoeensis Aspo-2]
Length = 268
Score = 39.3 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 25/114 (21%)
Query: 60 EDSLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + + IDLG G G G+ ++ + V+ I+ ++ + + L V
Sbjct: 36 LDSLLLACFARPGREQVGIDLGCGCGVVGLALLLRQPDLRLTGVD-IDPESVRVAGLNAV 94
Query: 118 VQKTAARGKVFACRIQEAPQMITT--CDVIS-----------------ARALAD 152
A R +A + + Q + D + +RA+A
Sbjct: 95 NLHYADR---YAATLADVAQWRSERVVDFVVANPPYRPLGCGRVSQGESRAVAR 145
>gi|268326452|emb|CBH40040.1| conserved hypothetical protein, SAM-dependent methyltransferase
type 11 family [uncultured archaeon]
Length = 247
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 24/120 (20%)
Query: 38 KWSKK-------INLVSSS-TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+W+K+ ++ E FW + D + +DLG+G GF +
Sbjct: 17 RWNKRNARAYERYRKIAPKKDEEQFWENAIVD-----TSINKNAFVLDLGTGTGF---LA 68
Query: 90 SIQLSSIEGGLVNLIE-SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
I L +G V ++ SKN + V ++ A+ + + P ++ D+I +R
Sbjct: 69 RIILK--QGFKVLGLDLSKN-----MLDVARRKASNAFLVRGDAENIPLKDSSVDLIVSR 121
>gi|226359950|ref|YP_002777728.1| hypothetical protein ROP_05360 [Rhodococcus opacus B4]
gi|226238435|dbj|BAH48783.1| hypothetical protein [Rhodococcus opacus B4]
Length = 250
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 9/89 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D L + +D+G+G G G V +E + A+ LR
Sbjct: 25 LWDYLHGLGVLERGRRALDIGAGTGQATGPLLAA-----GLDVTAVEPGPRLAARLRRA- 78
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
V R ++ + D+ A
Sbjct: 79 ---HPDAVVINERAEDVELPDSGFDIAIA 104
>gi|222153103|ref|YP_002562280.1| methyltransferase [Streptococcus uberis 0140J]
gi|222113916|emb|CAR42122.1| putative methyltransferase [Streptococcus uberis 0140J]
Length = 196
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 10/86 (11%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L +D+G G G I L+ +G L++ N+ + +
Sbjct: 54 LFDKGDTVLDVGCGYG----PLGISLAKAQGVQATLVDINNRAIELAKKNAVINNVSATI 109
Query: 128 FACRIQEAPQMITTCDVISA----RA 149
F I ++ T D + + RA
Sbjct: 110 FQSNI--YEKVSGTFDHVISNPPIRA 133
>gi|27378697|ref|NP_770226.1| hypothetical protein bll3586 [Bradyrhizobium japonicum USDA 110]
gi|27351846|dbj|BAC48851.1| bll3586 [Bradyrhizobium japonicum USDA 110]
Length = 533
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 23/136 (16%)
Query: 46 VSSSTVEDFWI----------RHVEDSLRVFQLHPYP---SIWIDLGSGGGFPGIITSIQ 92
+ ++ + H+ V+ + P ++LG G G + + Q
Sbjct: 17 TGPTPYDEVYYPGHVYGLTHPNHLATIAAVYGMQAAPVERCRVLELGCGVGGNLLPMAFQ 76
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISARALA 151
+ E V+L ++ + + K+ C I + D I A +
Sbjct: 77 YPNSEFVGVDLSGVTIERG---QRNIATLGLSNIKLLHCDIMNVDESFGQFDYIIAHGV- 132
Query: 152 DLDTLLEYSFPWLYQK 167
+ P + +K
Sbjct: 133 -----YSWVPPAVREK 143
>gi|84502186|ref|ZP_01000334.1| hypothetical protein OB2597_19321 [Oceanicola batsensis HTCC2597]
gi|84389546|gb|EAQ02265.1| hypothetical protein OB2597_19321 [Oceanicola batsensis HTCC2597]
Length = 244
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF +I+++ V I+S + + + +
Sbjct: 45 VIPEDLSGQTVLDIGCNAGF----YAIEMARRGAEKVVGIDSDPRYLAQAKLAAEVAGVE 100
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
++ + E ++ D + + L P L
Sbjct: 101 LELQQMSVYEVGRLGMRFDFVIF-----MGVLYHLRHPLLA 136
>gi|307300171|ref|ZP_07579956.1| Methyltransferase type 11 [Sinorhizobium meliloti BL225C]
gi|307316476|ref|ZP_07595919.1| Methyltransferase type 11 [Sinorhizobium meliloti AK83]
gi|306897674|gb|EFN28417.1| Methyltransferase type 11 [Sinorhizobium meliloti AK83]
gi|306905060|gb|EFN35643.1| Methyltransferase type 11 [Sinorhizobium meliloti BL225C]
Length = 264
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF + ++ G V I+S ++ ++
Sbjct: 52 VVPEDLEGRSVLDIGCNAGF----YAQEMKRRNAGRVLGIDSDPHYLRQAKFAAEQAGVD 107
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + +A ++ D++ + L P L
Sbjct: 108 IEYRLMSVYDAARLRERFDLVIF-----MGVLYHLRHPLLA 143
>gi|326446436|ref|ZP_08221170.1| methyltransferase type 11 [Streptomyces clavuligerus ATCC 27064]
Length = 265
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 12/103 (11%)
Query: 63 LRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P +D+G G G PG+ + + G V I ++ +
Sbjct: 37 LLIGKLAPGPGERVLDVGCGVGVPGLRLA----ELTGADVLGISVNREQVHEANRRAGEA 92
Query: 122 AA--RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R + + P + D + A L+ + P
Sbjct: 93 GLQERARFAYADAMDLPHPDASFDAVFA-----LEVFVHLDRP 130
>gi|91085911|ref|XP_969126.1| PREDICTED: similar to AGAP008846-PA [Tribolium castaneum]
Length = 428
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQKTAAR--GKVF 128
+D+G+G G I S+ + V +E S K + R V+++ +V
Sbjct: 36 GRRVLDVGAGTG----ILSVFCAQAGAAKVYAVEASNVSKIA--REVIKENGFDKVIEVI 89
Query: 129 ACRIQEAPQMITTCDVISA 147
RI++ + D+I +
Sbjct: 90 NSRIEDTV-LPEKVDIIVS 107
>gi|300117842|ref|ZP_07055609.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus SJ1]
gi|298724706|gb|EFI65381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus SJ1]
Length = 283
Score = 38.9 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 30/94 (31%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH +D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFDD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|228988554|ref|ZP_04148641.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771171|gb|EEM19650.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 283
Score = 38.9 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETSQKLDVVVS 187
>gi|170289516|ref|YP_001739754.1| ribosomal L11 methyltransferase [Thermotoga sp. RQ2]
gi|226710126|sp|B1L841|PRMA_THESQ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|170177019|gb|ACB10071.1| ribosomal L11 methyltransferase [Thermotoga sp. RQ2]
Length = 264
Score = 38.9 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 6/83 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + + +D+G G G I +I + V ++ + V+K
Sbjct: 123 LKKYLKEGNTVLDVGCGTG----ILAIAAKKLGASQVVAVDVDEQAVEVAEENVRKNDVD 178
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
V + + T D++ +
Sbjct: 179 VLVKWSDL--LSDVEGTFDIVVS 199
>gi|47570470|ref|ZP_00241103.1| hemK protein [Bacillus cereus G9241]
gi|47552866|gb|EAL11284.1| hemK protein [Bacillus cereus G9241]
Length = 283
Score = 38.9 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 30/94 (31%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH +D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFDD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|332524054|ref|ZP_08400306.1| methyltransferase small domain protein [Streptococcus porcinus str.
Jelinkova 176]
gi|332315318|gb|EGJ28303.1| methyltransferase small domain protein [Streptococcus porcinus str.
Jelinkova 176]
Length = 196
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 14/95 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +SL +D+G G G I L+ +G LI+ N+ +
Sbjct: 49 LLNSLS----FGTGESLLDVGCGYG----PLGIALAKTQGVSATLIDINNRAIELAKKNA 100
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
++ I + D I + RA
Sbjct: 101 TYNEVEVTIYQSNI--YENVTGQFDHIISNPPIRA 133
>gi|84494538|ref|ZP_00993657.1| putative methylase [Janibacter sp. HTCC2649]
gi|84384031|gb|EAP99911.1| putative methylase [Janibacter sp. HTCC2649]
Length = 285
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ IDL +G G + ++ V+ +E + ++ + ++ ++
Sbjct: 119 VVIDLCTGSGAIALAIKSEVPDAR---VHAVEVSDLAVAWAQRNRERLGLDVEIVHGDAV 175
Query: 134 EAPQMITTCDVISA 147
A + + DV+ +
Sbjct: 176 TAFEELAEVDVVVS 189
>gi|241889584|ref|ZP_04776882.1| methyltransferase small [Gemella haemolysans ATCC 10379]
gi|241863206|gb|EER67590.1| methyltransferase small [Gemella haemolysans ATCC 10379]
Length = 198
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
F + + +D+G G G I + + + + +++ N+ + ++
Sbjct: 52 FTTNKENAKVVDIGCGYGVISIFLAKKYPTYK---FTMVDVNNRVLELSKKNIELNKIEN 108
Query: 126 KVFACRIQEAPQMITTCDVI 145
+V ++ T D++
Sbjct: 109 EVEVLESSSFDNVVGTFDIV 128
>gi|205355276|ref|YP_002229077.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|226712974|sp|B5R9T9|RSMC_SALG2 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|205275057|emb|CAR40145.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326630441|gb|EGE36784.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 342
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|281358480|ref|ZP_06244961.1| Methyltransferase type 11 [Victivallis vadensis ATCC BAA-548]
gi|281315103|gb|EFA99135.1| Methyltransferase type 11 [Victivallis vadensis ATCC BAA-548]
Length = 213
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 9/86 (10%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE----SKNKKASFLRYVVQKT 121
F P +D+G GGG ++ L ++ S K SF R V+
Sbjct: 39 FFELPEKGRVLDVGCGGGS---FIAMMLKRAPETQFYGVDYSPVSVKKSLSFNRGAVR-- 93
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+ K+ + P D+++A
Sbjct: 94 DGQVKIVQGSVSALPFEPDFFDLVTA 119
>gi|319942740|ref|ZP_08017045.1| UbiE/COQ5 family methyltransferase [Sutterella wadsworthensis
3_1_45B]
gi|319803682|gb|EFW00626.1| UbiE/COQ5 family methyltransferase [Sutterella wadsworthensis
3_1_45B]
Length = 267
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G GF +I + G V ++ + + R + A +
Sbjct: 59 RVLDVGTGPGFFAVIL-----NALGYAVTAVDYTDAMLNEARLNAGEAAEHIHFHCMDAE 113
Query: 134 EAPQMITTCDVISAR 148
+ + DV+ +R
Sbjct: 114 KLGFADASFDVVVSR 128
>gi|315302731|ref|ZP_07873510.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria ivanovii FSL F6-596]
gi|313628901|gb|EFR97255.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria ivanovii FSL F6-596]
Length = 189
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L+ +D+G+G G G+ + IE V IE + + K
Sbjct: 22 SIDLLGLNNTCQKVLDVGAGTGSVGLQIACLYPEIE---VTAIERNPEAVELINQNKTKF 78
Query: 122 AARGKVFACRIQEAPQMIT-TCDVISARAL-----ADLDTLLEYSF 161
+ T D I +L ++++S
Sbjct: 79 GLQNIAVIEAYAPVEMPATNQFDAI----FIGGSGGNLTDIIDWSL 120
>gi|268325520|emb|CBH39108.1| putative methyltransferase [uncultured archaeon]
gi|268326141|emb|CBH39729.1| conserved hypothetical protein, SAM dependent methyltransferases
family [uncultured archaeon]
Length = 277
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 13/97 (13%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
RH+E + +D+G+G G + + V +E
Sbjct: 55 QVLFRHLE------PYLEDNYVLVDIGAGVGALAVPIA-----KRIQKVIAVEPSTAMIE 103
Query: 113 FLRYVVQ-KTAARGKVFACRIQEAP-QMITTCDVISA 147
L ++ + ++ R +E + CDV+ A
Sbjct: 104 GLIENIRKEEDITIEIINERWEEVDIENPKKCDVVLA 140
>gi|261838778|gb|ACX98544.1| hypothetical protein KHP_1356 [Helicobacter pylori 51]
Length = 238
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I DVI
Sbjct: 76 KNAIKFPNAQVFESDFLDFNPPIL-YDVIVC 105
>gi|289177356|gb|ADC84602.1| 16S rRNA m(2)G 1207 methyltransferase [Bifidobacterium animalis
subsp. lactis BB-12]
Length = 255
Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 12/94 (12%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RH + P ++DLG G G + +++ V ++ +
Sbjct: 101 VLLRH-------APMPPLEGTFLDLGCGWGAIALALALESPE---ATVYAVDVNERAIEL 150
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
R + G + A P + DVI +
Sbjct: 151 ARSNAEANGC-GNIHAGTAAVVPGDV-RFDVIWS 182
>gi|229060275|ref|ZP_04197642.1| hypothetical protein bcere0026_23760 [Bacillus cereus AH603]
gi|228719002|gb|EEL70618.1| hypothetical protein bcere0026_23760 [Bacillus cereus AH603]
Length = 196
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFAC 130
+DLGSG G I + I S V+L++S KK L+ ++ K
Sbjct: 15 ILDLGSGVGRNSIPIAQKIMNSGGTVTCVDLLDSALKK---LQIYSKEYGVYEVIKTKHS 71
Query: 131 RIQEAPQMITTCDVISARALADLDTL 156
I++ T D I A++ L+ L
Sbjct: 72 AIEDYYIAPNTYDYIV--AVSSLEHL 95
>gi|109946712|ref|YP_663940.1| hypothetical protein Hac_0080 [Helicobacter acinonychis str.
Sheeba]
gi|109713933|emb|CAJ98941.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 238
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ L +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSCPLIKNSGAILDIGSGCGILGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I DV+
Sbjct: 76 KNALKFPNTQVFESNFLDFNPPIL-YDVVVC 105
>gi|327393651|dbj|BAK11073.1| protein methyltransferase HemK [Pantoea ananatis AJ13355]
Length = 280
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P+ +D+G+G G + + + + V ++ + + A
Sbjct: 102 ALAHLPESPARVLDMGTGSGAIALAIASERPDCD---VIGVDRIPAAVALAQRNAAHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
F A D+I +
Sbjct: 159 PNATFIQSHWFAQITPARFDLIVS 182
>gi|289677510|ref|ZP_06498400.1| hypothetical protein PsyrpsF_29771 [Pseudomonas syringae pv.
syringae FF5]
Length = 315
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ +D+G G G ++ ++ + V+ ++ K F + + +
Sbjct: 136 NRAVDIGCGTGAGAMLIAVARPQAQ---VHAVDINPKALHFAQTNATVAGLKNMECCHSD 192
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 193 I--LSGLSGNFDLIVA 206
>gi|297193672|ref|ZP_06911070.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297151875|gb|EFH31393.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 217
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 34/110 (30%), Gaps = 17/110 (15%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
D W R L L P PS +D+G G G + + G V I+ +
Sbjct: 33 DAWSR-----LLTAWLPPDPSSVLDVGCGTGSLSALVAEA-----GHRVTGIDLSPRMVD 82
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
R + + P DV+ +R L ++ P
Sbjct: 83 RARAKLSAAGLPARFLVGDAAAPPTGDERFDVLLSR-------HLVWTLP 125
>gi|262301077|gb|ACY43131.1| arg methyltransferase [Milnesium tardigradum]
Length = 246
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + + +D+G G G I S+ + V ++ N R ++++
Sbjct: 12 DSLIYNEHLIRDKVVLDVGCGTG----ILSMFAAKAGAKKVYAVDCSN-IVHSARQIIKE 66
Query: 121 TAARG--KVFACRIQ--EAPQMITTCDVISA 147
V +++ E P DVI +
Sbjct: 67 NGFENVITVIQGKVEELELPDGCEKVDVIVS 97
>gi|242074768|ref|XP_002447320.1| hypothetical protein SORBIDRAFT_06g032890 [Sorghum bicolor]
gi|241938503|gb|EES11648.1| hypothetical protein SORBIDRAFT_06g032890 [Sorghum bicolor]
Length = 388
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVF 128
+ +D+G G G I S+ + V IE+ R +V+ V
Sbjct: 81 EGKVVLDVGCGTG----ILSVFCARAGAKRVYAIEASEIAVQA-REIVKANNLTDQVVVI 135
Query: 129 ACRIQEAPQMITTCDVISA 147
R+++ + DVI +
Sbjct: 136 HGRVEDV-DLEEKVDVIIS 153
>gi|161617866|ref|YP_001591830.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|226712977|sp|A9N7C4|RSMC_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|161367230|gb|ABX70998.1| hypothetical protein SPAB_05733 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 342
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|295443078|ref|NP_594825.2| type I protein arginine N-methyltransferase Rmt1
[Schizosaccharomyces pombe 972h-]
gi|259016193|sp|Q9URX7|ANM1_SCHPO RecName: Full=Probable protein arginine N-methyltransferase
gi|254745569|emb|CAB63498.2| type I protein arginine N-methyltransferase Rmt1
[Schizosaccharomyces pombe]
Length = 340
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
I +D+G G G + + + V++ E +K + V K + R
Sbjct: 50 PHLFRDKIVLDVGCGTGILSMFCARAGAK-HVYGVDMSEIIHKAVQIVE--VNKLSDRIT 106
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 107 LIQGKMEEIQLPVEKVDIIVS 127
>gi|238756520|ref|ZP_04617824.1| Ribosomal RNA small subunit methyltransferase C [Yersinia ruckeri
ATCC 29473]
gi|238705275|gb|EEP97688.1| Ribosomal RNA small subunit methyltransferase C [Yersinia ruckeri
ATCC 29473]
Length = 346
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVEDS---LRVFQLH-PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + + DS L + + P+ +D+G G G + + Q I+ L
Sbjct: 169 VKTLPGVFSKDALDSGSYLLLSTFNEPFKGRVLDVGCGAGVLASVLAKQSPKIKWT---L 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + +V A + + D+I +
Sbjct: 226 SDVSAAAIDASRATLAANDIEAEVIASNV--YSDIQGRFDMIIS 267
>gi|242017629|ref|XP_002429290.1| protein arginine N-methyltransferase, putative [Pediculus humanus
corporis]
gi|212514186|gb|EEB16552.1| protein arginine N-methyltransferase, putative [Pediculus humanus
corporis]
Length = 335
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARGKVF 128
+ +D+G+G G I SI + V +E+ N A + VV++ R +V
Sbjct: 40 EGKVVLDVGTGTG----ILSIFCAKAGAKKVYAVEASNM-AKLAKDVVKENDLDDRIEVH 94
Query: 129 ACRIQEAPQMITTCDVISA 147
C +Q+ + DVI +
Sbjct: 95 HCLVQDL-NLPEKVDVIVS 112
>gi|269797258|ref|YP_003311158.1| methyltransferase type 11 [Veillonella parvula DSM 2008]
gi|269093887|gb|ACZ23878.1| Methyltransferase type 11 [Veillonella parvula DSM 2008]
Length = 273
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 15/118 (12%)
Query: 35 LFLKWSKKIN---LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L W K+ N L+ S DF + V + + S +D+G+G G I +
Sbjct: 31 LLEYWDKRANDFSLMRKSNDYDFGRK-VY--AALSSVLTPDSSMLDIGAGPGSFTIPFA- 86
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQ---MITTCDVI 145
V IE + + ++ + +Q+ PQ + DV+
Sbjct: 87 ----QHIKSVTAIEPSKGMVAVFKENAKELGVENFNIIEEMVQDLPQDGSFDSQFDVV 140
>gi|225867309|ref|YP_002752687.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus 03BB102]
gi|225789080|gb|ACO29297.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus 03BB102]
Length = 283
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|168262394|ref|ZP_02684367.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|205348826|gb|EDZ35457.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
Length = 342
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|86153623|ref|ZP_01071826.1| ribosomal RNA small subunit methyltransferase C [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|121612928|ref|YP_001000191.1| hypothetical protein CJJ81176_0516 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005148|ref|ZP_02270906.1| hypothetical protein Cjejjejuni_02565 [Campylobacter jejuni subsp.
jejuni 81-176]
gi|85842584|gb|EAQ59796.1| ribosomal RNA small subunit methyltransferase C [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|87250517|gb|EAQ73475.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
81-176]
Length = 233
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPYPSI---WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + I D+G+G G GI+ +I ++LI+ + + +
Sbjct: 19 DSLILADFILKQGIKGAVFDVGAGCGIIGILLK---KNIANLSLSLIDIQKENIKLIEKN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ +G +F + Q I D I
Sbjct: 76 LKSNQIQGDIFYDDFNQF-QSIKKFDFIVC 104
>gi|93004961|ref|YP_579398.1| 3-demethylubiquinone-9 3-methyltransferase [Psychrobacter
cryohalolentis K5]
gi|92392639|gb|ABE73914.1| 3-demethylubiquinone-9 3-methyltransferase [Psychrobacter
cryohalolentis K5]
Length = 276
Score = 38.9 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 20/149 (13%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKK--------INLVSSSTVEDFWIRHV--ED 61
A+ +N NV +EK + W+K IN + + +E+ R D
Sbjct: 21 ADDTINAINVDPSEVEKFNKLAGEW--WNKTGAFATLHEINPLRLNWIEENVKRGYVSAD 78
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKNKKASFLRYVVQ 119
S + ++ +D+G GGG + G V I+ ++N KA+ L
Sbjct: 79 SQKTAEMGLAGKKVLDVGCGGGILSESMA-----RRGADVTGIDLGTENLKAASLHAEQS 133
Query: 120 KTAARGKVFACRIQE-APQMITTCDVISA 147
+ ++ A DV++
Sbjct: 134 NLQDTLRYQHIPVEALAATHAGQFDVVTC 162
>gi|324329277|gb|ADY24537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Bacillus thuringiensis serovar finitimus YBT-020]
Length = 283
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKIHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|291615247|ref|YP_003525404.1| methyltransferase type 11 [Sideroxydans lithotrophicus ES-1]
gi|291585359|gb|ADE13017.1| Methyltransferase type 11 [Sideroxydans lithotrophicus ES-1]
Length = 285
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
S +D+ +G G PG+ + + L +L E + A+ + A C
Sbjct: 49 DTSQVLDIAAGTGEPGLSAAKLTPRGKVTLTDLSERMLEVAN--ENAAHRGLANVATRQC 106
Query: 131 RIQEAPQMITTCDVISAR 148
E P + D + R
Sbjct: 107 DACELPFADQSFDAVMCR 124
>gi|261820337|ref|YP_003258443.1| tellurite resistance protein TehB [Pectobacterium wasabiae WPP163]
gi|261604350|gb|ACX86836.1| tellurite resistance protein TehB [Pectobacterium wasabiae WPP163]
Length = 286
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 20/109 (18%)
Query: 41 KKINLVSSSTVEDFW--IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
KK L T + ++H+ P +DLG GGG + ++ G
Sbjct: 100 KKYGLT--RTHSEVINAVQHI-----------KPGKTLDLGCGGGRNSLYL-----NLRG 141
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V + + L +++ A ++ D I +
Sbjct: 142 FDVTACDKHEQSIDSLNNIIKSEALDNIRAGVYNINLAEIKEQYDFILS 190
>gi|255562502|ref|XP_002522257.1| hexaprenyldihydroxybenzoate methyltransferase, putative [Ricinus
communis]
gi|223538510|gb|EEF40115.1| hexaprenyldihydroxybenzoate methyltransferase, putative [Ricinus
communis]
Length = 256
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 14/111 (12%)
Query: 42 KINLVSSSTVEDFWIRHV---EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
+N + + RH + S R F ID+G GGG + G
Sbjct: 91 AMNPTRLAFIRSTLCRHFRKNQSSARPFD----GLKIIDVGCGGGILSEPLARM-----G 141
Query: 99 GLVNLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V +++ K K + L + + + ++ + D + A
Sbjct: 142 ATVTGVDAVEKNIKIACLHADLDPLTSTIEYCCTTAEKLVEEQRKFDAVIA 192
>gi|145629334|ref|ZP_01785133.1| hypothetical protein CGSHi22121_11040 [Haemophilus influenzae
22.1-21]
gi|144978837|gb|EDJ88560.1| hypothetical protein CGSHi22121_11040 [Haemophilus influenzae
22.1-21]
Length = 235
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 27 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKLGLHHLTTFHK 81
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 82 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 112
>gi|317013276|gb|ADU83884.1| hypothetical protein HPLT_07495 [Helicobacter pylori Lithuania75]
Length = 238
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E NK +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGILGL---LCARDNPLASVHLVEKDNK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFEGDFLDFNPPIL-YDAIVC 105
>gi|86749135|ref|YP_485631.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris HaA2]
gi|86572163|gb|ABD06720.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
palustris HaA2]
Length = 296
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 20/115 (17%)
Query: 62 SLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
L + L P +DLG+G G + +I + V + + + R
Sbjct: 142 CLTLLDLVLRAGPPRSVLDLGTGTG----VLAIAAAKALRQPVLATDIDRQSVAVARENA 197
Query: 119 QKTAARGKVFA----CRIQEAPQMITTCDVISA-------RALADLDTLLEYSFP 162
+ V A A D++ A RALA + E+ P
Sbjct: 198 RLNGVGNLVHAEWATGFASPAFAAHAPFDLVLANILANPLRALA--QPMSEHLAP 250
>gi|52548374|gb|AAU82223.1| ubiE/COQ5 methyltransferase [uncultured archaeon GZfos11H11]
Length = 187
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
++ + +DLG G G +I LS G V ++ ++ ++
Sbjct: 21 CAQILEAEGEKRKILDLGCGSG----KLAIYLSEETGYAVTGVDPSRERI----ENAREK 72
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
++ +E + DV+ +
Sbjct: 73 SSSVTFVVQPAEETAFADSIFDVVVS 98
>gi|145638838|ref|ZP_01794446.1| hypothetical protein CGSHiII_01590 [Haemophilus influenzae PittII]
gi|145271810|gb|EDK11719.1| hypothetical protein CGSHiII_01590 [Haemophilus influenzae PittII]
gi|309750822|gb|ADO80806.1| Hypothetical protein R2866_0855 [Haemophilus influenzae R2866]
Length = 268
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKLGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|317182709|dbj|BAJ60493.1| hypothetical protein HPF57_1419 [Helicobacter pylori F57]
Length = 238
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDGK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|313887823|ref|ZP_07821503.1| methyltransferase domain protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846166|gb|EFR33547.1| methyltransferase domain protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 275
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL-IESKNKKASFLRYVVQKTAARGKV 127
P + +D+G G G + + +++ +V I S + K F + + + A V
Sbjct: 104 IPDGGVGLDVGCGSG--ALTIACAKRNLKATMVGCDIWSGSYKVEFSKKICEDNAKAEGV 161
Query: 128 FACRIQE-----APQMITTCDVISA 147
R +E P + DV+++
Sbjct: 162 SNVRFEEGNAVKLPFEDESFDVVTS 186
>gi|160937214|ref|ZP_02084576.1| hypothetical protein CLOBOL_02104 [Clostridium bolteae ATCC
BAA-613]
gi|158439778|gb|EDP17527.1| hypothetical protein CLOBOL_02104 [Clostridium bolteae ATCC
BAA-613]
Length = 197
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 35/97 (36%), Gaps = 11/97 (11%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
I+ D + + +D+G+G G +++L+ + + L++ +
Sbjct: 15 LLIQQFLD-----DYNLSAGVALDIGTGPG----NLAVELAKVTAMDLILVDIDGEALRT 65
Query: 114 LRYVVQKTAARGKV--FACRIQEAPQMITTCDVISAR 148
+ + + ++ +++ P D I R
Sbjct: 66 AQSRLFELGVDNRISTLCADVEKLPLRDNLADFIMCR 102
>gi|118480363|ref|YP_897514.1| HemK family modification methylase [Bacillus thuringiensis str. Al
Hakam]
gi|118419588|gb|ABK88007.1| modification methylase, HemK family [Bacillus thuringiensis str. Al
Hakam]
Length = 283
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|52140234|ref|YP_086597.1| HemK family modification methylase [Bacillus cereus E33L]
gi|51973703|gb|AAU15253.1| modification methylase, HemK family [Bacillus cereus E33L]
Length = 283
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|30265351|ref|NP_847728.1| HemK family modification methylase [Bacillus anthracis str. Ames]
gi|47530890|ref|YP_022239.1| HemK family modification methylase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188163|ref|YP_031416.1| HemK family modification methylase [Bacillus anthracis str. Sterne]
gi|165871296|ref|ZP_02215945.1| modification methylase, HemK family [Bacillus anthracis str. A0488]
gi|167636691|ref|ZP_02394979.1| modification methylase, HemK family [Bacillus anthracis str. A0442]
gi|170688140|ref|ZP_02879351.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A0465]
gi|170709377|ref|ZP_02899790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A0389]
gi|177651883|ref|ZP_02934466.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A0174]
gi|196042385|ref|ZP_03109650.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus NVH0597-99]
gi|227818091|ref|YP_002818100.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. CDC 684]
gi|228930336|ref|ZP_04093340.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228936613|ref|ZP_04099407.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|229094440|ref|ZP_04225512.1| Protein hemK [Bacillus cereus Rock3-42]
gi|229602075|ref|YP_002869543.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A0248]
gi|254686249|ref|ZP_05150108.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. CNEVA-9066]
gi|254724244|ref|ZP_05186028.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A1055]
gi|254735256|ref|ZP_05192965.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. Western North America USA6153]
gi|254744459|ref|ZP_05202139.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. Kruger B]
gi|254755797|ref|ZP_05207829.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. Vollum]
gi|254762137|ref|ZP_05213983.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. Australia 94]
gi|301056796|ref|YP_003795007.1| HemK family modification methylase [Bacillus anthracis CI]
gi|30260029|gb|AAP29214.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. Ames]
gi|47506038|gb|AAT34714.1| modification methylase, HemK family [Bacillus anthracis str. 'Ames
Ancestor']
gi|49182090|gb|AAT57466.1| modification methylase, HemK family [Bacillus anthracis str.
Sterne]
gi|164712963|gb|EDR18491.1| modification methylase, HemK family [Bacillus anthracis str. A0488]
gi|167527891|gb|EDR90713.1| modification methylase, HemK family [Bacillus anthracis str. A0442]
gi|170125725|gb|EDS94639.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A0389]
gi|170667833|gb|EDT18585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A0465]
gi|172082587|gb|EDT67651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A0174]
gi|196026777|gb|EDX65419.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus NVH0597-99]
gi|227005279|gb|ACP15022.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. CDC 684]
gi|228688977|gb|EEL42804.1| Protein hemK [Bacillus cereus Rock3-42]
gi|228823048|gb|EEM68886.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228829322|gb|EEM74955.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|229266483|gb|ACQ48120.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus anthracis str. A0248]
gi|300378965|gb|ADK07869.1| modification methylase, HemK family [Bacillus cereus biovar
anthracis str. CI]
Length = 283
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|118594963|ref|ZP_01552310.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophilales
bacterium HTCC2181]
gi|118440741|gb|EAV47368.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophilales
bacterium HTCC2181]
Length = 235
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+L +D+G GGG + +EG +V I+ +K +++
Sbjct: 48 KLSLEGKSILDVGCGGGILAEALA-----LEGAIVTGIDQGDKVIKIAELHNKESKLNIN 102
Query: 127 VFACRIQE-APQMITTCDVISA 147
I++ + DVI+
Sbjct: 103 YKNMNIEDFFKKNKEKYDVITC 124
>gi|319776157|ref|YP_004138645.1| Methyltransferase type 11 [Haemophilus influenzae F3047]
gi|317450748|emb|CBY86968.1| Methyltransferase type 11 [Haemophilus influenzae F3047]
Length = 268
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKLGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|301170008|emb|CBW29612.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 268
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKLGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|283783994|ref|YP_003363859.1| methyltransferase [Citrobacter rodentium ICC168]
gi|282947448|emb|CBG86995.1| putative methyltransferase [Citrobacter rodentium ICC168]
Length = 256
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+ +D+G G G + + + V + + + Q+ V
Sbjct: 45 SARVLDMGCGAGHASFVAA-----QKVNQVVAYDLSAQMLEVVAQAAQERGLTNIVTRQG 99
Query: 131 RIQEAPQMITTCDVISAR 148
+ P D++ +R
Sbjct: 100 YAESLPFEAGAFDIVISR 117
>gi|242091926|ref|XP_002436453.1| hypothetical protein SORBIDRAFT_10g002950 [Sorghum bicolor]
gi|241914676|gb|EER87820.1| hypothetical protein SORBIDRAFT_10g002950 [Sorghum bicolor]
Length = 379
Score = 38.9 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 11/92 (11%)
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
S VF+ P + +D+G+G G I +I + V +E+ N A R +
Sbjct: 55 YHS-AVFRNAPHFQGKVVLDVGTGSG----ILAIWSAQAGARKVYAVEATNM-AEHAREL 108
Query: 118 VQKTAAR--GKVFACRIQEAPQMITTCDVISA 147
+ +V +++ ++ DVI +
Sbjct: 109 ARANGVADIVEVIQGTVEDV-ELPEKVDVIIS 139
>gi|256826086|ref|YP_003150046.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
gi|256689479|gb|ACV07281.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
Length = 410
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G G G + + +G V ++ + R ++ A
Sbjct: 67 PGRVLDIGCGEGADAVWLA-----QQGWTVTALDISPNAVALTRAAAERAGVEVTGIAAP 121
Query: 132 IQEAPQMITTCDVISA 147
EA + D++SA
Sbjct: 122 FTEAELAPGSFDLVSA 137
>gi|219683279|ref|YP_002469662.1| 16S RNA G1207 methylase RsmC precursor [Bifidobacterium animalis
subsp. lactis AD011]
gi|219620929|gb|ACL29086.1| putative 16S RNA G1207 methylase RsmC precursor [Bifidobacterium
animalis subsp. lactis AD011]
Length = 231
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 12/94 (12%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RH + P ++DLG G G + +++ V ++ +
Sbjct: 77 VLLRH-------APMPPLEGTFLDLGCGWGAIALALALESPE---ATVYAVDVNERAIEL 126
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
R + G + A P + DVI +
Sbjct: 127 ARSNAEANGC-GNIHAGTAAVVPGDV-RFDVIWS 158
>gi|157412525|ref|YP_001483391.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. MIT 9215]
gi|254526041|ref|ZP_05138093.1| magnesium protoporphyrin O-methyltransferase [Prochlorococcus
marinus str. MIT 9202]
gi|157387100|gb|ABV49805.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. MIT 9215]
gi|221537465|gb|EEE39918.1| magnesium protoporphyrin O-methyltransferase [Prochlorococcus
marinus str. MIT 9202]
Length = 233
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 28/140 (20%)
Query: 36 FLKWSKKINLVSSSTVEDFWIR-----H---VEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
F +W+K S S + + H V+D + + +P + D G G G
Sbjct: 21 FERWNKIY---SKSDEINTVQKNIRKGHQKTVDDVVSYIKNYPELTKKSYCDAGCGVGSL 77
Query: 86 GIIT-SIQLSSIEGGLV--NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
I + + ++ + +I+ K+ + + + + + ++
Sbjct: 78 SIPLLRLGIKKLQVSDISSEMIKETKKRIN-------ELGLNQGIIKYEVCDLEKLKGLF 130
Query: 143 DVISARALADLDTLLEYSFP 162
DV+ LD + Y P
Sbjct: 131 DVVVC-----LDVFIHYPQP 145
>gi|114769742|ref|ZP_01447352.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
HTCC2255]
gi|114549447|gb|EAU52329.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
HTCC2255]
Length = 246
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V ++ K + Q++
Sbjct: 62 EGLKILDIGCGGGLLSEPMARL-----GATVVGADAAEKNIPVAQIHAQQSGLEIDYRHT 116
Query: 131 RIQEAPQMITTCDVI 145
+E + DV+
Sbjct: 117 SAEEILKNSEKFDVV 131
>gi|305667254|ref|YP_003863541.1| protoporphyrinogen oxidase [Maribacter sp. HTCC2170]
gi|88708188|gb|EAR00426.1| protoporphyrinogen oxidase [Maribacter sp. HTCC2170]
Length = 481
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ +D+G+G G + + L + + V ++ NK +
Sbjct: 109 LEHGKSEINILDIGTGSGCIAVSLAKLLPNSK---VYALDISNKALEVAKKNAILNQVEV 165
Query: 126 KVFACRIQEAPQMITTCDVISA 147
+ + ++ DVI +
Sbjct: 166 EFLQADVLTLKELHLKFDVIVS 187
>gi|328874821|gb|EGG23186.1| Sterol 24-C-methyltransferase [Dictyostelium fasciculatum]
Length = 465
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 13/102 (12%)
Query: 50 TVEDFWIR--H-VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
T+E+ +R H V D+ R+ + S +D+G G G P + + G + +
Sbjct: 221 TLEEAVVRLEHDVADAARITK----DSYVLDVGCGVGGPTLEIA----QYTGCRIVGLNI 272
Query: 107 KNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVIS 146
K+ R +K R + P T DV++
Sbjct: 273 NKKQVEICRDRAKKLGLADRAAFTHGDAMKMPYADNTFDVVT 314
>gi|300113549|ref|YP_003760124.1| methyltransferase type 11 [Nitrosococcus watsonii C-113]
gi|299539486|gb|ADJ27803.1| Methyltransferase type 11 [Nitrosococcus watsonii C-113]
Length = 231
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P PS +DL G G + + + + + V L E R +QK +
Sbjct: 47 PNPSRILDLACGTGISTLAIASRYPNCQVVGVELREEY---LEIARQKIQKLGLKNIELV 103
Query: 130 CRIQEAPQMITTCDVISA 147
E D +++
Sbjct: 104 LSRAEDYHSKEPFDCVNS 121
>gi|229158890|ref|ZP_04286947.1| Protein hemK [Bacillus cereus ATCC 4342]
gi|228624501|gb|EEK81271.1| Protein hemK [Bacillus cereus ATCC 4342]
Length = 283
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|146310407|ref|YP_001175481.1| methyltransferase type 11 [Enterobacter sp. 638]
gi|145317283|gb|ABP59430.1| Methyltransferase type 11 [Enterobacter sp. 638]
Length = 256
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ +DLG G G + + V + ++ + + +
Sbjct: 46 AHVLDLGCGAGHASFVAA-----QHVAKVTAYDLSSQMLEVVSHAAKDKGLSNITTQQGY 100
Query: 132 IQEAPQMITTCDVISAR 148
+ P + D++ +R
Sbjct: 101 AESLPLTDESFDIVISR 117
>gi|108563833|ref|YP_628149.1| hypothetical protein HPAG1_1408 [Helicobacter pylori HPAG1]
gi|107837606|gb|ABF85475.1| hypothetical protein HPAG1_1408 [Helicobacter pylori HPAG1]
Length = 238
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRSLIKNSGTILDIGSGCGILGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFEGDFLDFNPPIL-YDAIVC 105
>gi|88602601|ref|YP_502779.1| putative methyltransferase [Methanospirillum hungatei JF-1]
gi|88188063|gb|ABD41060.1| putative methyltransferase [Methanospirillum hungatei JF-1]
Length = 291
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+D+G G G + + +G V ++E S L + K+
Sbjct: 66 EGEAVLDIGGGPGTIALPLA-----QKGAHVTVVEPAVGIVSVLSDNIADQGFSNIKIIH 120
Query: 130 CRIQEA-PQMITTCDVISA 147
R ++ P+ + + D I A
Sbjct: 121 SRWEDVLPEQLGSYDHIIA 139
>gi|297380641|gb|ADI35528.1| Hypothetical protein HPV225_1510 [Helicobacter pylori v225d]
Length = 238
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDGK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|154482578|ref|ZP_02025026.1| hypothetical protein EUBVEN_00245 [Eubacterium ventriosum ATCC
27560]
gi|149736603|gb|EDM52489.1| hypothetical protein EUBVEN_00245 [Eubacterium ventriosum ATCC
27560]
Length = 318
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 18/110 (16%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
I+ ++ + +DLG G G I SI + V++ +
Sbjct: 153 TGKHDTTQLCIK------QLVEYVKDGDKVLDLGCGSG----ILSIVAKKLNASKVDMTD 202
Query: 106 SKNKKASFLRY---VVQKTAARGKVFACRIQEAPQM-----ITTCDVISA 147
+ V + + KV A + E +M D++ A
Sbjct: 203 IDPAAIEAVYDNFKVNKLSMDNVKVEAGNVLEDEKMQAEFEAEQYDIVVA 252
>gi|311695181|gb|ADP98054.1| type IV-A pilus assembly ATPase PilB [marine bacterium HP15]
Length = 760
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
S + + H+ L + + + +G G G+ + S V +E
Sbjct: 31 TGHSIPREETVSHI---LSLLPEIEPDQMVMHVGGGSGYFAAVLSGL-----AHRVLYVE 82
Query: 106 SKNKKASFLRYVVQKTAARGK-VFACRIQEAPQMITTCDVISA 147
A R + V R +EAP+ CD++
Sbjct: 83 RNAVVAEAARERFVRLGMHNVDVVVARAEEAPEPDPLCDLVLC 125
>gi|261840179|gb|ACX99944.1| hypothetical protein HPKB_1407 [Helicobacter pylori 52]
Length = 238
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDGK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|168244550|ref|ZP_02669482.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|194448966|ref|YP_002048576.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|226712975|sp|B4TGY8|RSMC_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|194407270|gb|ACF67489.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|205336629|gb|EDZ23393.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
Length = 342
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|329767189|ref|ZP_08258716.1| hypothetical protein HMPREF0428_00413 [Gemella haemolysans M341]
gi|328836856|gb|EGF86503.1| hypothetical protein HMPREF0428_00413 [Gemella haemolysans M341]
Length = 198
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
F + D+G G G I + + + + +++ N+ + ++
Sbjct: 52 FSTEKENAKVADIGCGYGVISIFLAKKYPTFK---FTMVDVNNRVLELSKKNIELNKINN 108
Query: 126 KVFACRIQEAPQMITTCDVI 145
+V + D++
Sbjct: 109 EVEVLESSSFDNVEGNFDIV 128
>gi|303230005|ref|ZP_07316779.1| methyltransferase domain protein [Veillonella atypica
ACS-134-V-Col7a]
gi|302515371|gb|EFL57339.1| methyltransferase domain protein [Veillonella atypica
ACS-134-V-Col7a]
Length = 276
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 15/118 (12%)
Query: 35 LFLKWSKKIN---LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
L W K+ N L+ S DF + V + + S +D+G+G G I +
Sbjct: 31 LLEYWDKRANDFSLMRKSNDYDFGRK-VY--AALSSILTPDSSMLDIGAGPGSFTIPFA- 86
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-IQEAPQ---MITTCDVI 145
V IE + L+ ++ +Q+ PQ D++
Sbjct: 87 ----QHIKSVTAIEPSKGMVTVLKENAKELNVENINIIEELVQDLPQDGSPDFQFDLV 140
>gi|260893749|ref|YP_003239846.1| putative SAM-dependent methyltransferase [Ammonifex degensii KC4]
gi|260865890|gb|ACX52996.1| putative SAM-dependent methyltransferase [Ammonifex degensii KC4]
Length = 299
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 9/80 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G+G G ++ + EG V +E + FL ++
Sbjct: 77 GMRVLDIGAGPGTFALVLA-----REGMEVTALEPSREMLRFLEEQARQENLPITCVRST 131
Query: 132 IQEA----PQMITTCDVISA 147
QE D++ A
Sbjct: 132 WQEVDLDREGWRERFDLVLA 151
>gi|2832402|emb|CAA75340.1| dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
thaliana]
Length = 322
Score = 38.9 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 10/108 (9%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+N + + RH S P+ +ID+G GGG + G V
Sbjct: 104 MNPTRLAFIRSTLCRHF--SKDPSSAKPFEGLKFIDIGCGGGLLSEPLARM-----GATV 156
Query: 102 NLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ +K K + L + + + ++ D + +
Sbjct: 157 TGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLS 204
>gi|317181189|dbj|BAJ58975.1| hypothetical protein HPF32_1393 [Helicobacter pylori F32]
Length = 238
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDGK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|315281967|ref|ZP_07870480.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria marthii FSL S4-120]
gi|313614387|gb|EFR88018.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria marthii FSL S4-120]
Length = 189
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 13/106 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I V IE ++ K
Sbjct: 22 SIDLLGLDNTSKKLLDVGAGTGSVGLQVACNFPEIN---VTAIERNPDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
+ T D I +L ++++S
Sbjct: 79 GLKNVAVVEAYAPIELPENDTFDAI----FIGGSGGNLTDIIDWSL 120
>gi|270010158|gb|EFA06606.1| hypothetical protein TcasGA2_TC009521 [Tribolium castaneum]
Length = 401
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQKTAAR--GKVF 128
+D+G+G G I S+ + V +E S K + R V+++ +V
Sbjct: 24 GRRVLDVGAGTG----ILSVFCAQAGAAKVYAVEASNVSKIA--REVIKENGFDKVIEVI 77
Query: 129 ACRIQEAPQMITTCDVISA 147
RI++ + D+I +
Sbjct: 78 NSRIEDTV-LPEKVDIIVS 95
>gi|226315062|ref|YP_002774958.1| hypothetical protein BBR47_54770 [Brevibacillus brevis NBRC 100599]
gi|226098012|dbj|BAH46454.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 296
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 6/102 (5%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL-IES 106
+ + V + + +D+G+G G I +++ V+L +E+
Sbjct: 103 PRPETEILVEQVMAAATMLWPESEELAVVDIGTGSGAICITLALEKPQWRVTTVDLSLEA 162
Query: 107 KNKKASFLRYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ R + A + +Q + DV+ +
Sbjct: 163 ----TAIARENASRLGADVRFLQGDLVQPLLEAGEKVDVLVS 200
>gi|188528274|ref|YP_001910961.1| hypothetical protein HPSH_07720 [Helicobacter pylori Shi470]
gi|188144514|gb|ACD48931.1| hypothetical protein HPSH_07720 [Helicobacter pylori Shi470]
Length = 238
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDGK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|168464529|ref|ZP_02698432.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|195632765|gb|EDX51219.1| ribosomal RNA small subunit methyltransferase C [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
Length = 342
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGLEGEVFASNV--FSEVKGRFDMIIS 267
>gi|187923068|ref|YP_001894710.1| methyltransferase type 11 [Burkholderia phytofirmans PsJN]
gi|187714262|gb|ACD15486.1| Methyltransferase type 11 [Burkholderia phytofirmans PsJN]
Length = 250
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 32/105 (30%), Gaps = 10/105 (9%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L S + +R + +S+ + +D+G G G + V
Sbjct: 19 LTSPTHATGADLRALAESIAATP----DATVLDMGCGAGHASFAVA-----PHAREVVAY 69
Query: 105 ESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+ + + + ++ + + P + D + +R
Sbjct: 70 DIAPQMLATVEGAAKERGLANIRTQQGAAEVLPFADHSFDWVISR 114
>gi|15224587|ref|NP_180649.1| ATCOQ3 (ARABDIOPSIS THALIANA COENZYME Q 3);
hexaprenyldihydroxybenzoate methyltransferase/
polyprenyldihydroxybenzoate methyltransferase
[Arabidopsis thaliana]
gi|21264383|sp|O49354|COQ3_ARATH RecName: Full=Hexaprenyldihydroxybenzoate methyltransferase,
mitochondrial; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase;
Short=DHHB-MT; Short=DHHB-MTase; AltName:
Full=3-demethylubiquinone-n 3-methyltransferase;
AltName: Full=Dihydroxyhexaprenylbenzoate
methyltransferase; AltName: Full=Protein EMBRYO
DEFECTIVE 3002; Flags: Precursor
gi|3201619|gb|AAC20726.1| dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
thaliana]
gi|15027943|gb|AAK76502.1| putative dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
thaliana]
gi|20259179|gb|AAM14305.1| putative dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
thaliana]
gi|330253364|gb|AEC08458.1| Hexaprenyldihydroxybenzoate methyltransferase [Arabidopsis
thaliana]
Length = 322
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 10/108 (9%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+N + + RH S P+ +ID+G GGG + G V
Sbjct: 104 MNPTRLAFIRSTLCRHF--SKDPSSAKPFEGLKFIDIGCGGGLLSEPLARM-----GATV 156
Query: 102 NLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ +K K + L + + + ++ D + +
Sbjct: 157 TGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLS 204
>gi|315638933|ref|ZP_07894104.1| rRNA methyltransferase [Campylobacter upsaliensis JV21]
gi|315480962|gb|EFU71595.1| rRNA methyltransferase [Campylobacter upsaliensis JV21]
Length = 237
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 22/98 (22%)
Query: 61 DSLRVFQLHPYPS----IWIDLGSGGGFPGII-------TSIQLSSIEGGLVNLIESKNK 109
DSL + +D+G+G G GI+ + L ++ + LI+ K
Sbjct: 18 DSLLLSAFILEDKLNQKTLLDVGAGCGIIGILLKSFNVNLKLSLLELQKENIMLIQENLK 77
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +F ++ +E D I
Sbjct: 78 QNNF----------EAEILHRDFKEFKNEK-RFDCIVC 104
>gi|227114551|ref|ZP_03828207.1| tellurite resistance protein TehB [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 286
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 20/109 (18%)
Query: 41 KKINLVSSSTVEDFW--IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
KK L T + ++H+ P +DLG GGG + ++ G
Sbjct: 100 KKYGLT--RTHSEVINAVQHI-----------KPGKTLDLGCGGGRNSLYL-----NLRG 141
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V + + L +++ A ++ D I +
Sbjct: 142 FDVTACDKHAQSIDSLNNIIKSEALENIRAGVYNINLAEIKEQYDFILS 190
>gi|255544137|ref|XP_002513131.1| protein arginine n-methyltransferase, putative [Ricinus communis]
gi|223548142|gb|EEF49634.1| protein arginine n-methyltransferase, putative [Ricinus communis]
Length = 406
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VF 128
+ +D+G G G I SI + V +++ + VV+ K V
Sbjct: 98 EGKVVVDVGCGTG----ILSIFCAQAGAKRVYAVDASDIAVQA-NEVVKANNLSDKIIVL 152
Query: 129 ACRIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 153 HGRVEDV-EIDEEVDVIIS 170
>gi|21536690|gb|AAM61022.1| dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
thaliana]
Length = 322
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 10/108 (9%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+N + + RH S P+ +ID+G GGG + G V
Sbjct: 104 MNPTRLAFIRSTLCRHF--SKDPSSAKPFEGLKFIDIGCGGGLLSEPLARM-----GATV 156
Query: 102 NLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ +K K + L + + + ++ D + +
Sbjct: 157 TGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLS 204
>gi|15966368|ref|NP_386721.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
1021]
gi|307313045|ref|ZP_07592672.1| ubiquinone biosynthesis O-methyltransferase [Sinorhizobium meliloti
BL225C]
gi|307321051|ref|ZP_07600457.1| ubiquinone biosynthesis O-methyltransferase [Sinorhizobium meliloti
AK83]
gi|21363063|sp|Q92MK1|UBIG_RHIME RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|15075639|emb|CAC47194.1| Putative 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium
meliloti 1021]
gi|306893326|gb|EFN24106.1| ubiquinone biosynthesis O-methyltransferase [Sinorhizobium meliloti
AK83]
gi|306899364|gb|EFN29998.1| ubiquinone biosynthesis O-methyltransferase [Sinorhizobium meliloti
BL225C]
Length = 248
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 23/137 (16%)
Query: 23 RETLEK--LEYFYFLFLKW----SK-----KINLVSSSTVEDFWIRHV---EDSLRVFQL 68
R T+++ ++ F + +W K K N V + + D H S + +
Sbjct: 6 RTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLTYIRDRVSEHFGRDAKSRQPLE- 64
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G GGG + + V ++ K R +
Sbjct: 65 ---GLRVLDIGCGGGLLSEPMARMGAD-----VVGADASEKNIGIARTHAAGSGVSVDYR 116
Query: 129 ACRIQEAPQMITTCDVI 145
A + + + DV+
Sbjct: 117 AVTAEALAEAGESFDVV 133
>gi|67624501|ref|XP_668533.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659740|gb|EAL38305.1| hypothetical protein Chro.80394 [Cryptosporidium hominis]
Length = 324
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV---QKTAARGKVF 128
I +D+G G G I S+ + V ++ N SFL + + + KV
Sbjct: 43 GKIVLDVGCGTG----ILSMLAAKCGAKAVYAVDGSN--ISFLAKTIVEDNELSEVVKVI 96
Query: 129 ACRIQEAPQMITTCDVISA 147
I+E + D+I +
Sbjct: 97 HGVIEEIELPVNQVDIIVS 115
>gi|307720668|ref|YP_003891808.1| methyltransferase small [Sulfurimonas autotrophica DSM 16294]
gi|306978761|gb|ADN08796.1| methyltransferase small [Sulfurimonas autotrophica DSM 16294]
Length = 231
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL ++ +D+G+G G G++ + + + +E + F +
Sbjct: 15 DSLFLYDFINSFHPKGKVLDVGAGCGIVGLLVA---RDNKKVELEAVEKQEAFIHFCKTN 71
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ K++ C E + D I +
Sbjct: 72 ARVNNISYKLYECDFLELTE-KNKYDYIIS 100
>gi|254780014|ref|YP_003058121.1| hypothetical protein HELPY_1477 [Helicobacter pylori B38]
gi|254001927|emb|CAX30180.1| Conserved hypothetical protein [Helicobacter pylori B38]
Length = 238
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E NK +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGILGL---LCARDNPLASVHLVEKDNK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|163849945|ref|YP_001637988.1| methyltransferase type 12 [Methylobacterium extorquens PA1]
gi|163661550|gb|ABY28917.1| Methyltransferase type 12 [Methylobacterium extorquens PA1]
Length = 254
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G GF S+++ V ++S + R+V ++
Sbjct: 46 AQALPDDLTGKSVLDVGCNAGF----YSVEMKRRGAARVLGLDSDEHYLAQARFVAERLG 101
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + ++ DV+ + P L
Sbjct: 102 YDIEFRNLSVYDVGRLGERFDVVIF-----MGVFYHLRHPLLA 139
>gi|89056202|ref|YP_511653.1| methyltransferase type 12 [Jannaschia sp. CCS1]
gi|88865751|gb|ABD56628.1| Methyltransferase type 12 [Jannaschia sp. CCS1]
Length = 360
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 7/85 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TA 122
+ + + D G GGG + + + +L E +F V +
Sbjct: 172 LVERLEHGIDVADFGCGGGRAMMTLAKAFPNSRFHGFDLCED-----AFADTVAEAQFEG 226
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ R + + T D+++A
Sbjct: 227 LSNLSYEARDLSSAHSVGTFDLVTA 251
>gi|213408367|ref|XP_002174954.1| UbiE-like methyltransferase [Schizosaccharomyces japonicus yFS275]
gi|212003001|gb|EEB08661.1| UbiE-like methyltransferase [Schizosaccharomyces japonicus yFS275]
Length = 272
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G G G I + L + V I+ + ++ +
Sbjct: 30 VLPFLKDGMRILDIGCGPGTITIDFARMLPQAQ---VIGIDMSKDVINIAEENARRAKIK 86
Query: 125 GKVF-ACRIQEAPQMITTCDVISA 147
F I Q D++ A
Sbjct: 87 NVQFEVGDIHTLQQPKNNFDMVFA 110
>gi|157364267|ref|YP_001471034.1| methyltransferase small [Thermotoga lettingae TMO]
gi|157314871|gb|ABV33970.1| methyltransferase small [Thermotoga lettingae TMO]
Length = 210
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ V + +DLG G G GI+ + E V + + + F R +
Sbjct: 58 ILVEHAIVHGKKVLDLGCGYGVVGIVVKGEYPDSE---VYMSDVNERAVEFARINAKDNN 114
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
+ + Q DVI
Sbjct: 115 VDVTIKCGSFYDPWQE-EKFDVI 136
>gi|67923006|ref|ZP_00516500.1| Methyltransferase FkbM [Crocosphaera watsonii WH 8501]
gi|67855154|gb|EAM50419.1| Methyltransferase FkbM [Crocosphaera watsonii WH 8501]
Length = 290
Score = 38.9 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
H D + Y + +D+G+ G + + + + G ++ E K SF
Sbjct: 83 MIETHCAD--WLCSKIDYGDVVLDVGAAFGVISLPLAQAVG--KKGQIHAFEPARKTQSF 138
Query: 114 LRYVVQKTAARG-KVFACRIQEAPQMIT 140
L+ ++ + + C + + P
Sbjct: 139 LKQIIDLNQIQNITIVPCAVNDQPGKAE 166
>gi|88800042|ref|ZP_01115612.1| hypothetical protein MED297_16574 [Reinekea sp. MED297]
gi|88777168|gb|EAR08373.1| hypothetical protein MED297_16574 [Reinekea sp. MED297]
Length = 367
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 5/87 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK--KASFLRYVVQK 120
L ++ P +DLG G G G+ + V LI+ + K++ + +
Sbjct: 213 LSYYEHLPAADKVLDLGCGNGILGLAYFKAHPDAQ---VVLIDENAQALKSAEQNWTLND 269
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
A D+I
Sbjct: 270 LPGNAITVHSNGLNALAADQQFDLILC 296
>gi|332184882|gb|AEE27136.1| hypothetical protein FN3523_1833 [Francisella cf. novicida 3523]
Length = 234
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 16/101 (15%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + RH+ DS F +D+G G G + + + + ++
Sbjct: 3 DHNETYGRHILDS---FSKDKDFKNVLDIGCGAGS---DLLVVRKNNKNANLTGVD---- 52
Query: 110 KASFLRYVVQKTAARG-KVFACRIQEAPQMITT--CDVISA 147
F + +K + + I++ D+I A
Sbjct: 53 ---FGNWNQEKLSKNNIHLINIDIEKDKLPFENNHFDLIIA 90
>gi|254495977|ref|ZP_05108885.1| CrtF (hydroxyneurosporene (C20) methyltransferase) [Legionella
drancourtii LLAP12]
gi|254354855|gb|EET13482.1| CrtF (hydroxyneurosporene (C20) methyltransferase) [Legionella
drancourtii LLAP12]
Length = 396
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 23/152 (15%)
Query: 8 SILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ 67
ILR ++++ +T E+ L W + + T++ H
Sbjct: 176 DILRFGTTDSSWSWPPKTKEQ----AVLLENWMTR---TAKQTIDCILD-HF-------- 219
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ ++D+G G G + ++ + NL S + + + R V
Sbjct: 220 NFKKINSFLDVGGGDGTMACTFATAYPHLKATVYNLPHSAE--LAKANIDTKDLSGRVNV 277
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEY 159
FA + D+I A L+++
Sbjct: 278 FAGDFIKDDAFPVGFDLIL---FAR--VLMDW 304
>gi|315585890|gb|ADU40271.1| methyltransferase [Helicobacter pylori 35A]
Length = 238
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I DVI
Sbjct: 76 KNAFKFPNAQVFESDFLDFNPPIL-YDVIVC 105
>gi|323343507|ref|ZP_08083734.1| protein-(glutamine-N5) methyltransferase [Prevotella oralis ATCC
33269]
gi|323095326|gb|EFZ37900.1| protein-(glutamine-N5) methyltransferase [Prevotella oralis ATCC
33269]
Length = 276
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ P + +D+G G G + ++ +I G V + ++ Q
Sbjct: 98 CAWITHETPEDATVLDVGCGSGCIAVTLAL---NIHGAHVVAWDISDEALHIAESNAQAL 154
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
AR + P + DV+ +
Sbjct: 155 HARVDIVRQDALIPPADVEKWDVVVS 180
>gi|229050999|ref|ZP_04194548.1| Protein hemK [Bacillus cereus AH676]
gi|228722376|gb|EEL73772.1| Protein hemK [Bacillus cereus AH676]
Length = 283
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|218463768|ref|ZP_03503859.1| putative SAM-dependent methyltransferase protein [Rhizobium etli
Kim 5]
Length = 247
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+V +D+G GF S+++ G V I+S + + ++
Sbjct: 47 QVVPEDLRGCSVLDIGCNAGF----YSLEMKRRNAGRVVGIDSDPRYLKQAEFAARQIGE 102
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + E ++ D++ + L P L
Sbjct: 103 DIEFKLMSVYEVQKLKERFDLVLF-----MGVLYHLRHPLLA 139
>gi|321441993|gb|ADW85411.1| arg methyltransferase [Fulgoraecia exigua]
Length = 244
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++ G
Sbjct: 18 RHLFKGKTVLDIGCGTG----ILSMFAAKAGAEKVIAVECSN-IVDYARKIIEANGLHGV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
+V +++E + D+I +
Sbjct: 73 IEVVKGKVEEVELPVDKVDIIIS 95
>gi|146329089|ref|YP_001209570.1| S-adenosylmethionine-dependent methyltransferase [Dichelobacter
nodosus VCS1703A]
gi|146232559|gb|ABQ13537.1| S-adenosylmethionine-dependent methyltransferase [Dichelobacter
nodosus VCS1703A]
Length = 268
Score = 38.9 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 13/112 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-- 120
L F P P +D+G+G G + + G V L ++ + + + QK
Sbjct: 45 LAPFMRTPKPLEILDIGAGAGQMALWCAAF-----GHRVTLFDASERLLAQAQKQAQKES 99
Query: 121 TAARGKVFACRIQEAPQMIT--TCDVISARALADL----DTLLEYSFPWLYQ 166
A+ I + P ++ D + + A+ + L E +L
Sbjct: 100 LNAQCTFICGEITQMPDVLGARQFDFVLSHAVLEWLEDGAQLFERCQQYLKP 151
>gi|313624096|gb|EFR94176.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria innocua FSL J1-023]
Length = 189
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 15/111 (13%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE ++ K
Sbjct: 22 SIDLLGLDNTSKKLLDVGAGTGSVGLQVAYNFPHIK---VTAIERNKDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQ--EAPQMITTCDVISARAL-----ADLDTLLEYSFPWLY 165
+ E PQ D I +L ++++S L
Sbjct: 79 GVKNVAVIEAYAPIELPQE-EKFDAI----FIGGSGGNLTDIIDWSLVHLK 124
>gi|260582925|ref|ZP_05850709.1| SAM-dependent methyltransferase [Haemophilus influenzae NT127]
gi|260094025|gb|EEW77929.1| SAM-dependent methyltransferase [Haemophilus influenzae NT127]
Length = 268
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKFGLHNLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|332296061|ref|YP_004437984.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermodesulfobium narugense DSM 14796]
gi|332179164|gb|AEE14853.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermodesulfobium narugense DSM 14796]
Length = 290
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 13/109 (11%)
Query: 42 KIN---LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
K+N L+ + E+ + + P ++D+G+G G I S+ IE
Sbjct: 94 KVNEDVLIPRNETEEIID-------IIKKFFPRAKTFLDIGTGSG--AIALSLVR-EIEN 143
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + ++ KV P DVI +
Sbjct: 144 SFCVATDISERALMVAKENAKENNLENKVSFELADLFPLEKKMFDVIVS 192
>gi|312143008|ref|YP_003994454.1| Methyltransferase type 11 [Halanaerobium sp. 'sapolanicus']
gi|311903659|gb|ADQ14100.1| Methyltransferase type 11 [Halanaerobium sp. 'sapolanicus']
Length = 263
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+DLGSG GF + S E G V I+ + R QK + F
Sbjct: 78 LKEGETVLDLGSGAGFDAFLAS--REVGEKGKVIGIDMTEEMVEKARENAQKNGVKNVEF 135
Query: 129 A-CRIQEAPQMITTCDVISA 147
I++ P + DVI +
Sbjct: 136 ILGEIEDLPLADESIDVIIS 155
>gi|307638161|gb|ADN80611.1| Predicted O-methyltransferase [Helicobacter pylori 908]
gi|325996760|gb|ADZ52165.1| Predicted O-methyltransferase [Helicobacter pylori 2018]
gi|325998355|gb|ADZ50563.1| hypothetical protein hp2017_1439 [Helicobacter pylori 2017]
Length = 238
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNGGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|283458471|ref|YP_003363097.1| 16S RNA G1207 methylase RsmC [Rothia mucilaginosa DY-18]
gi|283134512|dbj|BAI65277.1| 16S RNA G1207 methylase RsmC [Rothia mucilaginosa DY-18]
Length = 207
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +D+G G G + ++ + V+ ++ ++
Sbjct: 57 PQGTRMLDIGCGWGPITLTLAMLAPQAQ---VHAVDVNSRSIGLTERNAAALGLSNVTVG 113
Query: 130 CRIQEAPQMITTCDVISA 147
P++ D I +
Sbjct: 114 TPESVDPELR--FDTIWS 129
>gi|257460669|ref|ZP_05625770.1| methyltransferase small [Campylobacter gracilis RM3268]
gi|257442000|gb|EEV17142.1| methyltransferase small [Campylobacter gracilis RM3268]
Length = 413
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G G G++ + ++L+E + + L+ + ++ E
Sbjct: 215 VLDVGAGCGILGLLLK---RDFKSINLSLLEIQERNLEILKLNSSQNGLAAEILHADFAE 271
Query: 135 APQMITTCDVISA 147
D I +
Sbjct: 272 FKSEK-RFDFIVS 283
>gi|229176004|ref|ZP_04303500.1| Protein hemK [Bacillus cereus MM3]
gi|228607497|gb|EEK64823.1| Protein hemK [Bacillus cereus MM3]
Length = 283
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYKTSQKLDVVVS 187
>gi|260814339|ref|XP_002601873.1| hypothetical protein BRAFLDRAFT_215283 [Branchiostoma floridae]
gi|229287175|gb|EEN57885.1| hypothetical protein BRAFLDRAFT_215283 [Branchiostoma floridae]
Length = 320
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFA 129
+ +D+G+G G I S+ V IE+ A R VV+ G+ V
Sbjct: 33 GKVVVDVGAGTG----ILSLFSVQAGARKVYAIEASVL-AEETRKVVKANGMEGRIEVLH 87
Query: 130 CRIQEAPQMITTCDVISA 147
R +E ++ DVI +
Sbjct: 88 GRAEEV-ELPEKADVIVS 104
>gi|134098946|ref|YP_001104607.1| hypothetical protein SACE_2382 [Saccharopolyspora erythraea NRRL
2338]
gi|291006816|ref|ZP_06564789.1| hypothetical protein SeryN2_20033 [Saccharopolyspora erythraea NRRL
2338]
gi|133911569|emb|CAM01682.1| hypothetical protein SACE_2382 [Saccharopolyspora erythraea NRRL
2338]
Length = 301
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V L P P +D+GS GF ++ L+ G V + N + LR + +
Sbjct: 146 VLTLVP-PGRVLDVGSCFGF----LALLLAERPGTRVVASDIANGTVTLLRAIAPELGLP 200
Query: 125 GKVFACRIQEAPQMITTCDVIS 146
C P D ++
Sbjct: 201 LGTLICDGARVPLPDQAVDTVT 222
>gi|148270257|ref|YP_001244717.1| methyltransferase small [Thermotoga petrophila RKU-1]
gi|147735801|gb|ABQ47141.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga petrophila RKU-1]
Length = 210
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +DLG G G GI+ + +E V + + + F + +
Sbjct: 60 HGKKVLDLGCGYGVVGIVLKKEYPDLE---VYMSDINKRAVEFAKINAKD---HNVEVDI 113
Query: 131 RIQEAPQMIT--TCDVISA 147
R + D+I
Sbjct: 114 RWGNLYEPWEGMKFDMIVC 132
>gi|330809678|ref|YP_004354140.1| methyltransferase small domain [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377786|gb|AEA69136.1| Conserved hypothetical protein, containing Methyltransferase small
domain [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 337
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G G G I+ + + V ++ + L V A G V R
Sbjct: 140 RAVDIGCGAGVGAIVIARARREAQ---VLAVDINPQALR-LSAVNAALAEVGNVEVARSD 195
Query: 134 EAPQMITTCDVISA 147
+ D+I A
Sbjct: 196 VLQDVPGNFDLIVA 209
>gi|255647533|gb|ACU24230.1| unknown [Glycine max]
Length = 379
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G+G G I S+ + V +E + A + +V+
Sbjct: 92 KFLFKNKVVLDVGAGTG----ILSLFCAKAGAEHVYAVECSHM-ADMAKEIVEANGYSNV 146
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E + D+I +
Sbjct: 147 VTVLKGKIEEIELPVAKVDIIIS 169
>gi|154149843|ref|YP_001403461.1| methyltransferase type 11 [Candidatus Methanoregula boonei 6A8]
gi|153998395|gb|ABS54818.1| Methyltransferase type 11 [Methanoregula boonei 6A8]
Length = 284
Score = 38.5 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 8/84 (9%), Positives = 23/84 (27%), Gaps = 9/84 (10%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +D+G G G + + + V + + ++ V +
Sbjct: 65 FCAEGARVLDIGCGAGSLSLPLARAGAE-----VTSFDISPGMLAQVQRVADREGLSVTT 119
Query: 128 FAC----RIQEAPQMITTCDVISA 147
A + D++ +
Sbjct: 120 IAGSWWTANIDRLGFREKFDLVIS 143
>gi|303256164|ref|ZP_07342180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Burkholderiales bacterium 1_1_47]
gi|302860893|gb|EFL83968.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Burkholderiales bacterium 1_1_47]
Length = 267
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P ++ DLG+G G +++ + +L ES A + + A
Sbjct: 95 WLIEHLPKNALVCDLGTGSGCIAATVALERPDLTVWASDLSESALAVA---QANCKALGA 151
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
K+ + + D + +
Sbjct: 152 DVKLVQGSWLDPYPAELSFDAVIS 175
>gi|331001218|ref|ZP_08324844.1| protein-(glutamine-N5) methyltransferase [Parasutterella
excrementihominis YIT 11859]
gi|329568945|gb|EGG50741.1| protein-(glutamine-N5) methyltransferase [Parasutterella
excrementihominis YIT 11859]
Length = 247
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P ++ DLG+G G +++ + +L ES A + + A
Sbjct: 75 WLIEHLPKNALVCDLGTGSGCIAATVALERPDLTVWASDLSESALAVA---QANCKALGA 131
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
K+ + + D + +
Sbjct: 132 DVKLVQGSWLDPYPAELSFDAVIS 155
>gi|329296265|ref|ZP_08253601.1| release factor-specific protein-(glutamine-N5) methyltransferase
[Plautia stali symbiont]
Length = 276
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L PS +DLG+G G + + + + + + + + Q+
Sbjct: 102 ALLRLPATPSAVLDLGTGTGAIALALASERPDCQ---ITGCDRIAAAVALAQDNAQRLHL 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
F D+I +
Sbjct: 159 TNAGFVLSHWFDDLPAQRFDLIVS 182
>gi|307354923|ref|YP_003895974.1| type 12 methyltransferase [Methanoplanus petrolearius DSM 11571]
gi|307158156|gb|ADN37536.1| Methyltransferase type 12 [Methanoplanus petrolearius DSM 11571]
Length = 282
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 9/80 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
SI +D+G+G G I + + V +E A LR + + +
Sbjct: 64 DSIILDVGAGPGTIAIPLA-----GKAAAVTAVEPSPAMAGVLREKIAENGIENITVVEK 118
Query: 132 ----IQEAPQMITTCDVISA 147
+ + D++ A
Sbjct: 119 PWEDVDPESDLNPPYDIVFA 138
>gi|242277527|ref|YP_002989656.1| methyltransferase type 11 [Desulfovibrio salexigens DSM 2638]
gi|242120421|gb|ACS78117.1| Methyltransferase type 11 [Desulfovibrio salexigens DSM 2638]
Length = 241
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 61 DSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGL-VNLIESKNKKASFLRYV 117
DSL + P + +DLG+G G I I L + GL + +E + +
Sbjct: 25 DSLLISSFVSVPSQARVLDLGTGSGV--IPLGIMLRHPDKGLNITGLEINSDMVAAAEEN 82
Query: 118 VQKTA---ARGKVFACRIQEAPQMITTCDVISA 147
VQK G V + D++ +
Sbjct: 83 VQKLGFAEEIGIVQGNVCTPDFAPAGSYDLVVS 115
>gi|109895909|sp|Q1QEI9|UBIG_PSYCK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
Length = 257
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 20/149 (13%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKK--------INLVSSSTVEDFWIRHV--ED 61
A+ +N NV +EK + W+K IN + + +E+ R D
Sbjct: 2 ADDTINAINVDPSEVEKFNKLAGEW--WNKTGAFATLHEINPLRLNWIEENVKRGYVSAD 59
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKNKKASFLRYVVQ 119
S + ++ +D+G GGG + G V I+ ++N KA+ L
Sbjct: 60 SQKTAEMGLAGKKVLDVGCGGGILSESMA-----RRGADVTGIDLGTENLKAASLHAEQS 114
Query: 120 KTAARGKVFACRIQE-APQMITTCDVISA 147
+ ++ A DV++
Sbjct: 115 NLQDTLRYQHIPVEALAATHAGQFDVVTC 143
>gi|291006175|ref|ZP_06564148.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
Length = 282
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 20/102 (19%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
++ + V D P +D+G+G G G V IE
Sbjct: 39 TRPRYPDELILDLVAD---------KPERALDIGTGTGVVGRQL-----QPHVPEVVGIE 84
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +R V ++ +V + T D++ +
Sbjct: 85 PDER----MRAVARRRGL--RVENATFESWQPGSRTFDLVVS 120
>gi|219850704|ref|YP_002465136.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
gi|219544963|gb|ACL15413.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
Length = 191
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ S+ V + +ID+G G GF + ++ + G+V I+ + + L
Sbjct: 24 ILGSIGV----REGATFIDVGCGDGFFALPAAVLVGLT--GMVYGIDVDEGRLARLSAQA 77
Query: 119 QKTAARG-KVFACRIQEAPQMITTCDVI 145
++ ++ +E+ D++
Sbjct: 78 REQGLENIRLVRGEAEESVPCQGCADIV 105
>gi|77409396|ref|ZP_00786095.1| Methyltransferase small domain family [Streptococcus agalactiae
COH1]
gi|77172005|gb|EAO75175.1| Methyltransferase small domain family [Streptococcus agalactiae
COH1]
Length = 156
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +SL +DLG G G I L+ ++G +++ + +
Sbjct: 9 LLNSL----HFEKNKSLLDLGCGYG----PLGISLAKVQGVKATMVDINTRALELAKKNA 60
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
+ +VF I + T D I + RA
Sbjct: 61 TRNGVVVEVFQSNI--YENISKTFDYIISNPPIRA 93
>gi|76800405|ref|ZP_00782027.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus agalactiae
18RS21]
gi|76584395|gb|EAO61378.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus agalactiae
18RS21]
Length = 177
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +SL +DLG G G I L+ ++G +++ + +
Sbjct: 49 LLNSL----HFEKNKSLLDLGCGYG----PLGISLAKVQGVKATMVDINTRALELAKKNA 100
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
+ +VF I + T D I + RA
Sbjct: 101 TRNGVVVEVFQSNI--YENISKTFDYIISNPPIRA 133
>gi|22537113|ref|NP_687964.1| hypothetical protein SAG0952 [Streptococcus agalactiae 2603V/R]
gi|25010994|ref|NP_735389.1| hypothetical protein gbs0940 [Streptococcus agalactiae NEM316]
gi|76788359|ref|YP_329668.1| methyltransferase domain-containing protein [Streptococcus
agalactiae A909]
gi|77406474|ref|ZP_00783529.1| Methyltransferase small domain family [Streptococcus agalactiae
H36B]
gi|77411028|ref|ZP_00787383.1| Methyltransferase small domain family [Streptococcus agalactiae
CJB111]
gi|77413257|ref|ZP_00789454.1| Methyltransferase small domain family [Streptococcus agalactiae
515]
gi|22533974|gb|AAM99836.1|AE014235_9 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|23095394|emb|CAD46599.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563416|gb|ABA46000.1| methyltransferase domain protein [Streptococcus agalactiae A909]
gi|77160717|gb|EAO71831.1| Methyltransferase small domain family [Streptococcus agalactiae
515]
gi|77162952|gb|EAO73908.1| Methyltransferase small domain family [Streptococcus agalactiae
CJB111]
gi|77174909|gb|EAO77723.1| Methyltransferase small domain family [Streptococcus agalactiae
H36B]
Length = 196
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +SL +DLG G G I L+ ++G +++ + +
Sbjct: 49 LLNSL----HFEKNKSLLDLGCGYG----PLGISLAKVQGVKATMVDINTRALELAKKNA 100
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
+ +VF I + T D I + RA
Sbjct: 101 TRNGVVVEVFQSNI--YENISKTFDYIISNPPIRA 133
>gi|158522466|ref|YP_001530336.1| ribosomal protein L11 methyltransferase [Desulfococcus oleovorans
Hxd3]
gi|226710072|sp|A8ZW25|PRMA_DESOH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|158511292|gb|ABW68259.1| ribosomal protein L11 methyltransferase [Desulfococcus oleovorans
Hxd3]
Length = 302
Score = 38.5 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 17/98 (17%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+ +H+ + ++D+G+G G I I + V +++
Sbjct: 153 EMVEKHLA----------PGTAFLDVGTGSG----ILMIAAQKLGAKTVWGVDNDGVAVK 198
Query: 113 FLRYVVQKTAARGKVFACRIQEAP---QMITTCDVISA 147
+++ ACRI A + D+++A
Sbjct: 199 IAAENLERNGIFAGGNACRIMRADLVTGVDRAFDLVTA 236
>gi|260808668|ref|XP_002599129.1| hypothetical protein BRAFLDRAFT_266113 [Branchiostoma floridae]
gi|229284405|gb|EEN55141.1| hypothetical protein BRAFLDRAFT_266113 [Branchiostoma floridae]
Length = 317
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 16/155 (10%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKK--------INLVSSSTVEDF 54
Y S+S+ + +++ E ++K + W K +N + + D
Sbjct: 54 YPSSDSVNESGTKQKKTSINPEEVKKFNALASKW--WDTKGELKGLHSMNRLRVPMIRDT 111
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
++H S+ +D+G GGG + + + + G ++ E K A+
Sbjct: 112 LVKH--HSISKKSRPLEGLRILDVGCGGGILSVPLAKLGAQVTG--LDASEEAVKAATAH 167
Query: 115 RYVVQKTAARGKVFACRIQE--APQMITTCDVISA 147
+++ A ++ D + A
Sbjct: 168 MARDPSLKDTLTFTHGTVEDLVASEVRDYYDALVA 202
>gi|150378078|ref|YP_001314673.1| methyltransferase type 11 [Sinorhizobium medicae WSM419]
gi|150032625|gb|ABR64740.1| Methyltransferase type 11 [Sinorhizobium medicae WSM419]
Length = 214
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 12/79 (15%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + LV+L E+K +SF +++ T
Sbjct: 32 FPNSARIVDLGAGSGGVAAHMAALRPDLRFCLVDLDETKLAASSFEKHIANIT------- 84
Query: 129 ACRIQEAPQMITTCDVISA 147
+ P+ D
Sbjct: 85 -----QVPEPDGAFDAAIC 98
>gi|39997721|ref|NP_953672.1| biotin synthesis protein [Geobacter sulfurreducens PCA]
gi|39984613|gb|AAR35999.1| biotin synthesis protein, putative [Geobacter sulfurreducens PCA]
gi|298506655|gb|ADI85378.1| biotin biosynthesis methyltransferase BioC [Geobacter
sulfurreducens KN400]
Length = 267
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 15/93 (16%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P+ +D+G+G G + + + S V+L ++A R + +T R A
Sbjct: 42 EPARILDVGAGTGALALRLADRYPSAAITCVDLAHGMARQA---RDNLGRTMERLVAVA- 97
Query: 131 RIQEAPQMITTCDVISA-----------RALAD 152
+ P D++ + RA A+
Sbjct: 98 DAEHLPLRDGVFDLVVSTSTFQWLTTLDRAFAE 130
>gi|332796421|ref|YP_004457921.1| methyltransferase small domain-containing protein [Acidianus
hospitalis W1]
gi|332694156|gb|AEE93623.1| methyltransferase small domain protein [Acidianus hospitalis W1]
Length = 184
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P +DLG G G GI +++ +++ V +++ + + V++ + +V
Sbjct: 42 IIPQQGTVVDLGCGYGVIGIFIALKNENLK---VYMLDVNPLAIATAKMNVERYNLQNRV 98
Query: 128 FACRIQEAPQMITTCDVI 145
+ + D I
Sbjct: 99 VVMKSDVLSALQEKVDAI 116
>gi|229153492|ref|ZP_04281670.1| Protein hemK [Bacillus cereus m1550]
gi|228630096|gb|EEK86747.1| Protein hemK [Bacillus cereus m1550]
Length = 283
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|228991484|ref|ZP_04151435.1| hypothetical protein bpmyx0001_22380 [Bacillus pseudomycoides DSM
12442]
gi|228768249|gb|EEM16861.1| hypothetical protein bpmyx0001_22380 [Bacillus pseudomycoides DSM
12442]
Length = 236
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI--EGGLVNLIESKNKKASFLRY 116
V D + +F+ +DLGSG G I + + + V+L++S +K L
Sbjct: 38 VIDLIALFE-GKDNLSVLDLGSGVGRNSIPLAQAIKENGGKVVCVDLLDSALQK---LNQ 93
Query: 117 VVQKTAAR--GKVFACRIQEAPQMITTCDVISARALADLD 154
++ + + I D I A++ L+
Sbjct: 94 YSEEYEVKEVIQTEKADIGNYDIKPNNFDFIV--AVSSLE 131
>gi|229033961|ref|ZP_04188915.1| Protein hemK [Bacillus cereus AH1271]
gi|228728387|gb|EEL79409.1| Protein hemK [Bacillus cereus AH1271]
Length = 283
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|291521629|emb|CBK79922.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Coprococcus catus GD/7]
Length = 270
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
++ +D+G+G GF II S + + ++ E KKA + A + +
Sbjct: 47 KVERKGIRILDIGTGPGFFSIILS--RAGYQVTAIDYTEEMLKKA---KNNAGILANKIE 101
Query: 127 VFACRIQEAPQMITTCDVISAR 148
+ Q T D+I +R
Sbjct: 102 WYQMDAQALRFADNTFDMIVSR 123
>gi|256820610|ref|YP_003141889.1| modification methylase, HemK family [Capnocytophaga ochracea DSM
7271]
gi|256582193|gb|ACU93328.1| modification methylase, HemK family [Capnocytophaga ochracea DSM
7271]
Length = 281
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 9/88 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+ + +D+G+G G I + L + +++ E K+ + L VV
Sbjct: 106 LQEYPDKSEKIKILDVGTGSGCIAISLAKALPNAVVTAIDVSEEALKVAKRNAELNSVV- 164
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
I + D+I +
Sbjct: 165 -----THFLQQDILRIETLSDKYDIIIS 187
>gi|30023359|ref|NP_834990.1| modification methylase, HemK family [Bacillus cereus ATCC 14579]
gi|228961592|ref|ZP_04123201.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001]
gi|229112742|ref|ZP_04242275.1| Protein hemK [Bacillus cereus Rock1-15]
gi|229130578|ref|ZP_04259534.1| Protein hemK [Bacillus cereus BDRD-Cer4]
gi|229147869|ref|ZP_04276210.1| Protein hemK [Bacillus cereus BDRD-ST24]
gi|296505753|ref|YP_003667453.1| modification methylase, HemK family [Bacillus thuringiensis BMB171]
gi|29898920|gb|AAP12191.1| Methyltransferase [Bacillus cereus ATCC 14579]
gi|228635519|gb|EEK92008.1| Protein hemK [Bacillus cereus BDRD-ST24]
gi|228652917|gb|EEL08799.1| Protein hemK [Bacillus cereus BDRD-Cer4]
gi|228670723|gb|EEL26034.1| Protein hemK [Bacillus cereus Rock1-15]
gi|228798074|gb|EEM45078.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001]
gi|296326805|gb|ADH09733.1| modification methylase, HemK family [Bacillus thuringiensis BMB171]
Length = 283
Score = 38.5 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|228924064|ref|ZP_04087340.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228835554|gb|EEM80919.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 283
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I ++ E V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLAL---ENENLHVYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTDQKLDVVVS 187
>gi|219113017|ref|XP_002186092.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582942|gb|ACI65562.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 418
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 24/83 (28%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ Q DLG G G I+ + + + +KA+F + +
Sbjct: 226 SIAQHLEDGCDVADLGCGAGVMLILLAKSFPKSSFHGFEVSQVALEKAAFHVAAARVSNV 285
Query: 124 RGKVFACRIQEAPQMITTCDVIS 146
+ + D++
Sbjct: 286 FLHNATEPGESLRDQPSQFDLVV 308
>gi|15920608|ref|NP_376277.1| hypothetical protein ST0403 [Sulfolobus tokodaii str. 7]
gi|15621391|dbj|BAB65386.1| 194aa long conserved hypothetical protein [Sulfolobus tokodaii str.
7]
Length = 194
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P + D+G G G GI +++ +++ + +I+ K V++ +V
Sbjct: 51 VLPEEGVVADIGCGYGPIGIYIALKNPNLK---IYMIDIDKKAVYLAEKNVKRYKLENRV 107
Query: 128 FACR 131
R
Sbjct: 108 IVIR 111
>gi|88854950|ref|ZP_01129616.1| hypothetical protein A20C1_08803 [marine actinobacterium PHSC20C1]
gi|88816111|gb|EAR25967.1| hypothetical protein A20C1_08803 [marine actinobacterium PHSC20C1]
Length = 378
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
++ + IDLGSG G ++ + V I+ + R +
Sbjct: 230 EMKSDAARAIDLGSGTGVLATSLAVARPKL---SVVAIDQSTAAVASTRETADANGVGAR 286
Query: 127 VFACRIQEA--PQMITTCDVISA 147
V A R ++A + + D+I
Sbjct: 287 VEAAR-EDALTERPTASADLIVC 308
>gi|319790287|ref|YP_004151920.1| methyltransferase small [Thermovibrio ammonificans HB-1]
gi|317114789|gb|ADU97279.1| methyltransferase small [Thermovibrio ammonificans HB-1]
Length = 249
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 29/126 (23%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK---KASFLRYVVQKTAARG 125
DLG+G G I+ ++ +E ++++E K K + L V ++ A
Sbjct: 39 LKGKERLADLGTGCGVIPILLLLKHPKVEAVGIDVLEENVKLALKNAELNKVAERFQAVT 98
Query: 126 KVFACRIQEAPQMITTCDVISA------------------RALAD------LDTLLEYSF 161
+ ++ DV+ + RA+A L+ ++ +
Sbjct: 99 LNVTQVKEHF--RPSSFDVVVSNPPFIEVGRGSTSTRSMHRAVARQELKAKLEDFIKAAS 156
Query: 162 PWLYQK 167
L +
Sbjct: 157 YLLKDR 162
>gi|291300902|ref|YP_003512180.1| methyltransferase type 11 [Stackebrandtia nassauensis DSM 44728]
gi|290570122|gb|ADD43087.1| Methyltransferase type 11 [Stackebrandtia nassauensis DSM 44728]
Length = 241
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + V L P + +DLGSGGG + + GG +++ + R +
Sbjct: 60 DPVAVANLRP-GDVVLDLGSGGGID--VLLSARRVLPGGSAYGLDASADMVALARRYAAE 116
Query: 121 TAARGKVF-ACRIQEAPQMITTCDVISA 147
F I+ P + DV+ +
Sbjct: 117 AGVDNVEFLQGDIENIPLPDGSVDVVIS 144
>gi|167757655|ref|ZP_02429782.1| hypothetical protein CLORAM_03205 [Clostridium ramosum DSM 1402]
gi|237735202|ref|ZP_04565683.1| 16S rRNA m(2)G 1207 methyltransferase [Mollicutes bacterium D7]
gi|167702652|gb|EDS17231.1| hypothetical protein CLORAM_03205 [Clostridium ramosum DSM 1402]
gi|229381978|gb|EEO32069.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. D7]
Length = 197
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L +L S +D+G G G G+ ++E +++I+ + + +
Sbjct: 49 LDAIELDEGKSTLLDVGCGYGTFGVALKSAYPALE---IDMIDVNERALLLAKQNLAANN 105
Query: 123 ARGKVFACRIQEAPQMITTCDVIS 146
V+ + + DVI
Sbjct: 106 LEANVYLSSV--YENVTNKYDVIV 127
>gi|167762047|ref|ZP_02434174.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC
43183]
gi|167700139|gb|EDS16718.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC
43183]
Length = 303
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ P + +D+G+G G I S L + ++ ++ + A +Q +
Sbjct: 129 LKEVPSGARILDIGTGSGCIAISLSKMLPDAKVTAWDISDTALRIARRNNEALQASV--C 186
Query: 126 KVFACRIQEAPQMITTCDVISA 147
V + P DVI +
Sbjct: 187 FVQRDVLAYVPGSGERYDVIVS 208
>gi|126654533|ref|XP_001388437.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117377|gb|EAZ51477.1| hypothetical protein cgd8_3420 [Cryptosporidium parvum Iowa II]
Length = 324
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV---QKTAARGKVF 128
I +D+G G G I S+ + V ++ N SFL + + + KV
Sbjct: 43 GKIVLDVGCGTG----ILSMLAAKCGAKAVYAVDGSN--ISFLAKTIVEDNELSEVVKVI 96
Query: 129 ACRIQEAPQMITTCDVISA 147
I+E + D+I +
Sbjct: 97 HGVIEEIELPVNQVDIIVS 115
>gi|282880495|ref|ZP_06289202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Prevotella timonensis CRIS 5C-B1]
gi|281305598|gb|EFA97651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Prevotella timonensis CRIS 5C-B1]
Length = 283
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D+++ +L +D+G+G G I S+ I+ V +
Sbjct: 102 IVDTIQESKL--KSPTILDIGTGSGCIAITLSL---EIQKAKVVAWDVSTTAIQVANQNA 156
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+ A + AP+ D+I +
Sbjct: 157 RDLGATVSIVCQNALNAPRDAMKWDIIVS 185
>gi|229164276|ref|ZP_04292209.1| Protein hemK [Bacillus cereus R309803]
gi|228619216|gb|EEK76109.1| Protein hemK [Bacillus cereus R309803]
Length = 283
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 30/94 (31%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 VERHFGD---------KELHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A K + + + D++ +
Sbjct: 154 KENAKTLGAEVKFYHGDLLSPFYETGQKLDIVVS 187
>gi|222100464|ref|YP_002535032.1| Ribosomal protein L11 methyltransferase [Thermotoga neapolitana DSM
4359]
gi|254783321|sp|B9K9N3|PRMA_THENN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|221572854|gb|ACM23666.1| Ribosomal protein L11 methyltransferase [Thermotoga neapolitana DSM
4359]
Length = 264
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 12/100 (12%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G G G I +I + V ++ + + VQK +
Sbjct: 123 LKKYLKKGDRVVDVGCGTG----ILAIVAKKLGASYVMAVDVDEQAVEVAKENVQKNSVD 178
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V R ++ D++ + + L E L
Sbjct: 179 --VIVKRSDLLSEVDGVFDLVVS------NILAEIHLRLL 210
>gi|150003436|ref|YP_001298180.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC
8482]
gi|254881265|ref|ZP_05253975.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|149931860|gb|ABR38558.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC
8482]
gi|254834058|gb|EET14367.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 278
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 22/140 (15%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGII 88
E FY L + +K + L+ + + + H Y +D+G+G G +
Sbjct: 76 EEFYGLTFEVNKHV-LIPRPETGELVD-------WIIREHKYGRVRILDIGTGSGCIAVS 127
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA- 147
+ ++E V + K ++ R + + A DVI +
Sbjct: 128 LA---KNLEEAEVVSWDVSEKALQVAERNCRRNGVRVILEQRDVLLASPAGERFDVIVSN 184
Query: 148 --------RALADLDTLLEY 159
RA + L E+
Sbjct: 185 PPYITEKERADMSANVL-EW 203
>gi|146310194|ref|YP_001175268.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter sp. 638]
gi|226712951|sp|A4W687|RSMC_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|145317070|gb|ABP59217.1| 16S rRNA m(2)G 1207 methyltransferase [Enterobacter sp. 638]
Length = 342
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + P+ +D+G G G + + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTFTPHTKGKVLDVGCGAGVLSAVLASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G VFA + ++ D+I +
Sbjct: 223 LTLSDVSAPAVEASRATLAANGLEGDVFASNV--FSEVTGRFDIIIS 267
>gi|170727754|ref|YP_001761780.1| type 12 methyltransferase [Shewanella woodyi ATCC 51908]
gi|169813101|gb|ACA87685.1| Methyltransferase type 12 [Shewanella woodyi ATCC 51908]
Length = 254
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 16/111 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--K 120
L + +L P +D G G GF + G V L + + S + + +
Sbjct: 36 LALAELGDRPLRVLDAGGGFGFFSQKLAAL-----GHEVILCDISAEMLSLAQAQIDSAE 90
Query: 121 TAARGKVFACRIQEA-PQMITTCDVISARALAD--------LDTLLEYSFP 162
+ ++ IQ D+I A+A+ L L E P
Sbjct: 91 SDLNIRLVHSPIQALTLAEYGQFDLILCHAVAEWLTDARTTLSQLTELLKP 141
>gi|15616336|ref|NP_244641.1| protoporphyrinogen oxidase [Bacillus halodurans C-125]
gi|10176398|dbj|BAB07493.1| protoporphyrinogen oxidase [Bacillus halodurans C-125]
Length = 289
Score = 38.5 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G G + ++ E V ++ ++ A ++
Sbjct: 113 EEEITILDIGTGSGAIAVTLAL---EEERTNVTAVDISRDALQVAADNARRLGANVQLIH 169
Query: 130 CRIQE-APQMITTCDVISA 147
+ E + DVI +
Sbjct: 170 GDLGEPFLKTGERFDVIVS 188
>gi|37526150|ref|NP_929494.1| hypothetical protein plu2237 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785580|emb|CAE14530.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 315
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 8/94 (8%)
Query: 59 VEDSLRVFQLHPYPSIW-----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ D V +L P +DLG G G + + + +++ + K
Sbjct: 17 IYDMATVIRLIFKPDYLTGKYVLDLGCGTGHRLLGLASMYPDTQFVGIDMTD---KALEV 73
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ E DV+ +
Sbjct: 74 ADKLISYHQLDNVTLENNTIEKLTRDNQFDVVVS 107
>gi|300864070|ref|ZP_07108970.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300337949|emb|CBN54116.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 296
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG G G ++ E V ++ QK +
Sbjct: 101 PRRILDLGCGTGSTTLMLKQAFPQAE---VIGMDLSPYMILVAEMKAQKAGLNIQWRHGN 157
Query: 132 IQEAPQMITTCDVISA 147
++ + D+++A
Sbjct: 158 AEQTGFPNASFDLVTA 173
>gi|291522780|emb|CBK81073.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Coprococcus catus GD/7]
Length = 247
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+DLG G GF ++ +G + + +K + + V +
Sbjct: 48 DNPKVLDLGCGPGFFTMLLG-----QKGCQMTAFDYSDKMLAQAKQNVASVGVTAEFVQG 102
Query: 131 RIQEAPQMITTCDVISAR 148
Q P T D+I R
Sbjct: 103 DAQNLPFEDETFDMIVTR 120
>gi|88603247|ref|YP_503425.1| generic methyltransferase [Methanospirillum hungatei JF-1]
gi|88188709|gb|ABD41706.1| generic methyltransferase [Methanospirillum hungatei JF-1]
Length = 214
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA- 129
+ +D+G+G G + L+ V+ ++ + V + +V
Sbjct: 43 HSGTALDVGTGPGH----LATALALASDCTVHALDCSPDMIEICQTRVSEKGLTKRVIPA 98
Query: 130 -CRIQEAPQMITTCDVISAR 148
+ E P T D+I +R
Sbjct: 99 LGDVSEIPYGDNTFDLIISR 118
>gi|209964101|ref|YP_002297016.1| hypothetical protein RC1_0772 [Rhodospirillum centenum SW]
gi|209957567|gb|ACI98203.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 278
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 13/108 (12%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D+L +D+G GF +I++ V I+S + R+
Sbjct: 54 FADAL---PADLRGRSVLDIGCNAGF----YAIEMKRRGAAHVLGIDSDPRYLGQARFAA 106
Query: 119 QKTAARGKVFAC-RIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ R F + + ++ D++ + L P L
Sbjct: 107 EVLGLRDIEFRELSVYDVARLGRRFDLVLF-----MGVLYHLRHPLLA 149
>gi|220917033|ref|YP_002492337.1| Methyltransferase type 11 [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954887|gb|ACL65271.1| Methyltransferase type 11 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 228
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 31/104 (29%), Gaps = 12/104 (11%)
Query: 55 WIRHVE------DSLRVFQ-----LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ +H D+L++ P + + G+G G + + V+
Sbjct: 13 YDQHFAALAPMRDALQLVTGLALGELPAGARILCAGAGTGAELLYLAAAFPGWRFTAVDP 72
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ A R + ++E P D +A
Sbjct: 73 SGPMLRRCRAKAEAAG-VADRCRFHEGTVEELPGEAGDHDGATA 115
>gi|134099436|ref|YP_001105097.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
gi|133912059|emb|CAM02172.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
Length = 276
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 31/102 (30%), Gaps = 20/102 (19%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
++ + V D P +D+G+G G G V IE
Sbjct: 33 TRPRYPDELILDLVAD---------KPERALDIGTGTGVVGRQL-----QPHVPEVVGIE 78
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +R V ++ +V + T D++ +
Sbjct: 79 PDER----MRAVARRRGL--RVENATFESWQPGSRTFDLVVS 114
>gi|94984393|ref|YP_603757.1| hypothetical protein Dgeo_0285 [Deinococcus geothermalis DSM 11300]
gi|94554674|gb|ABF44588.1| SAM-dependent methyltransferase, rRNA adenine N-6-methyltransferase
family [Deinococcus geothermalis DSM 11300]
Length = 191
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
++DL G G G+ + G V L+E L + ++
Sbjct: 55 GGTFLDLHGGSGAVGLEAA-----SRGYAVTLVEKDTGAIRALEENSRLLGLPVRILRGD 109
Query: 132 IQEAPQMITTCDVISA 147
+ + DV+ +
Sbjct: 110 ALGLLPRLGSFDVVFS 125
>gi|284989161|ref|YP_003407715.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Geodermatophilus
obscurus DSM 43160]
gi|284062406|gb|ADB73344.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Geodermatophilus obscurus DSM 43160]
Length = 414
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +L P P + D+G+G G GI S V ES ++A + +
Sbjct: 243 TLARLAPVPGQLLWDVGAGAGSIGIEWMRVHPSCRAVAV---ESSAERARRIAENAARLG 299
Query: 123 ARG-KVFACRIQEAPQMITTCDVI 145
G +V R A + D +
Sbjct: 300 VPGLQVVEGRAPAALDRLPEPDAV 323
>gi|217962817|ref|YP_002341395.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus AH187]
gi|217067117|gb|ACJ81367.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus AH187]
Length = 283
Score = 38.5 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++
Sbjct: 106 IERHFSD---------EKIHVADIGTGSGAISITLALENKNLH---VYTVDIAQGSIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|322389699|ref|ZP_08063246.1| methyltransferase domain protein [Streptococcus parasanguinis ATCC
903]
gi|321143538|gb|EFX38969.1| methyltransferase domain protein [Streptococcus parasanguinis ATCC
903]
Length = 197
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 19/139 (13%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPY--PSI 74
++V+ + + + L +K+N T + + + D S + +
Sbjct: 6 FDVNPDAAHDIHDLAVVLL--GQKMN---FYTDAGVFSKKMIDYGSQVLLSTLDFQEGES 60
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G G G + L+ +G V +++ + + + ++F+ + E
Sbjct: 61 VLDVGCGYG----PIGLSLAKAQGVAVTMVDVNERALDLAKKNASRNGVEAQIFSSDVYE 116
Query: 135 APQMITTCDVISA----RA 149
A + D + + RA
Sbjct: 117 AVE--GVFDHVISNPPIRA 133
>gi|312866659|ref|ZP_07726873.1| methyltransferase small domain protein [Streptococcus parasanguinis
F0405]
gi|311097740|gb|EFQ55970.1| methyltransferase small domain protein [Streptococcus parasanguinis
F0405]
Length = 194
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 19/139 (13%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPY--PSI 74
++V+ + + + L +K+N T + + + D S + +
Sbjct: 3 FDVNPDAAHDIHDLAVVLL--GQKMN---FYTDAGVFSKKMIDYGSQVLLSTLDFQEGES 57
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G G G + L+ +G V +++ + + + ++F+ + E
Sbjct: 58 VLDVGCGYG----PIGLSLAKAQGVAVTMVDVNERALDLAKKNASRNGVEAQIFSSDVYE 113
Query: 135 APQMITTCDVISA----RA 149
A + D + + RA
Sbjct: 114 AVE--GVFDHVISNPPIRA 130
>gi|302793634|ref|XP_002978582.1| hypothetical protein SELMODRAFT_233156 [Selaginella moellendorffii]
gi|300153931|gb|EFJ20568.1| hypothetical protein SELMODRAFT_233156 [Selaginella moellendorffii]
Length = 215
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 6/92 (6%)
Query: 57 RHVE-DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH + D + L +D+G GGG + + + G ++ +E + A L
Sbjct: 15 RHFKKDPISPRPL--DGLTILDVGCGGGLLCEPLARMGAHVTG--IDAVEENIEVAK-LH 69
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
A ++ Q D+++A
Sbjct: 70 AAKDPLTATILYQHTTAEQLVQEKQQFDIVAA 101
>gi|294792064|ref|ZP_06757212.1| precorrin-6y c5,15-methyltransferase [Veillonella sp. 6_1_27]
gi|294457294|gb|EFG25656.1| precorrin-6y c5,15-methyltransferase [Veillonella sp. 6_1_27]
Length = 195
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
SI +D+G+G G I ++ G V IE +K + ++K V
Sbjct: 34 IEEDSIVLDVGAGTGSISIEAALAAPK---GHVYAIERFDKGIDLINENIKKFNVNNMTV 90
Query: 128 FACRIQEAPQMITTCDVIS 146
+ E + + D +
Sbjct: 91 IKSKAPEGMEELPELDAVI 109
>gi|294793931|ref|ZP_06759068.1| precorrin-6y c5,15-methyltransferase [Veillonella sp. 3_1_44]
gi|294455501|gb|EFG23873.1| precorrin-6y c5,15-methyltransferase [Veillonella sp. 3_1_44]
Length = 195
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
SI +D+G+G G I ++ G V IE +K + ++K V
Sbjct: 34 IEEDSIVLDVGAGTGSISIEAALAAPK---GHVYAIERFDKGIDLINENIKKFNVNNMTV 90
Query: 128 FACRIQEAPQMITTCDVIS 146
+ E + + D +
Sbjct: 91 IKSKAPEGMEELPELDAVI 109
>gi|229142070|ref|ZP_04270595.1| Protein hemK [Bacillus cereus BDRD-ST26]
gi|228641359|gb|EEK97665.1| Protein hemK [Bacillus cereus BDRD-ST26]
Length = 213
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++
Sbjct: 36 IERHFSD---------EKIHVADIGTGSGAISITLALENKNLH---VYTVDIAQGSIEVA 83
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 84 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 117
>gi|288549961|ref|ZP_05968778.2| methlytransferase, UbiE/COQ5 family [Enterobacter cancerogenus ATCC
35316]
gi|288316777|gb|EFC55715.1| methyltransferase, UbiE/COQ5 family [Enterobacter cancerogenus ATCC
35316]
Length = 283
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR 131
+ +DLG G G + + V + ++ + +
Sbjct: 73 AHVLDLGCGAGHASFTAA-----QKVAQVVAYDLSSQMLEVVAEAAKAKGLNNVATRQGY 127
Query: 132 IQEAPQMITTCDVISAR 148
+ P T DV+ +R
Sbjct: 128 AESLPFEDETFDVVISR 144
>gi|157112795|ref|XP_001651876.1| juvenile hormone acid methyltransferase, putative [Aedes aegypti]
gi|89258596|gb|ABD65474.1| juvenile hormone acid methyl transferase [Aedes aegypti]
gi|108877952|gb|EAT42177.1| juvenile hormone acid methyltransferase, putative [Aedes aegypti]
Length = 278
Score = 38.5 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 18/125 (14%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
++ H + + +D+G G G I I + + V +
Sbjct: 15 RRDAKEILDEH----GHLLRWKEENEDSLLDIGCGSGDVLIDFVIPMVPPKRARVLGTDV 70
Query: 107 KNKKASFLRYV---VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ F R V V+ I D I++ Y W
Sbjct: 71 SEQMVRFARKVHSDVENLFFETLDIEGDISSFLNKWGCFDHITS--F--------YCLHW 120
Query: 164 LYQKK 168
+ ++
Sbjct: 121 VRSQR 125
>gi|183602406|ref|ZP_02963772.1| hypothetical protein BIFLAC_05155 [Bifidobacterium animalis subsp.
lactis HN019]
gi|241191240|ref|YP_002968634.1| hypothetical protein Balac_1216 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196646|ref|YP_002970201.1| hypothetical protein Balat_1216 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218325|gb|EDT88970.1| hypothetical protein BIFLAC_05155 [Bifidobacterium animalis subsp.
lactis HN019]
gi|240249632|gb|ACS46572.1| hypothetical protein Balac_1216 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240251200|gb|ACS48139.1| hypothetical protein Balat_1216 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295794233|gb|ADG33768.1| hypothetical protein BalV_1180 [Bifidobacterium animalis subsp.
lactis V9]
Length = 209
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 12/94 (12%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+RH + P ++DLG G G + +++ V ++ +
Sbjct: 55 VLLRH-------APMPPLEGTFLDLGCGWGAIALALALESPE---ATVYAVDVNERAIEL 104
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
R + G + A P + DVI +
Sbjct: 105 ARSNAEANGC-GNIHAGTAAVVPGDV-RFDVIWS 136
>gi|20092728|ref|NP_618803.1| ribosomal RNA adenine dimethylase [Methanosarcina acetivorans C2A]
gi|19918019|gb|AAM07283.1| ribosomal RNA adenine dimethylase [Methanosarcina acetivorans C2A]
Length = 323
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
S +D+G+G G + + V +E ++ QK ++ +
Sbjct: 107 ASRVLDVGAGPGTLAVPLA-----SRCAHVTAVEPAAGMVEVMKEFAQKEGVENLEIVSK 161
Query: 131 RIQEA--PQMITTCDVISA 147
R ++ ++ DV+ A
Sbjct: 162 RWEDIDPAELSGPYDVVFA 180
>gi|253689655|ref|YP_003018845.1| Methyltransferase type 11 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756233|gb|ACT14309.1| Methyltransferase type 11 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 257
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P + ID+G G G + + ++ V + ++ + +
Sbjct: 39 AALLAPFPQAQV-IDVGCGAGHASFVAAQAVAE-----VIAYDLSSQMLEVVSQAAMQKG 92
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+V + P ++ D+I +R
Sbjct: 93 LNNIRVQQGVAESLPFKDSSADIIISR 119
>gi|225463764|ref|XP_002267286.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 411
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFAC 130
+ +D+G G G I SI + + V +++ V + V
Sbjct: 96 GKVVVDVGCGTG----ILSIFCAQVGAKRVYAVDASEIAIQASAVVKANNLSDTVIVLHG 151
Query: 131 RIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 152 RVEDV-EIDEGVDVIIS 167
>gi|297742734|emb|CBI35368.3| unnamed protein product [Vitis vinifera]
Length = 414
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQKTAARGKVFAC 130
+ +D+G G G I SI + + V +++ V + V
Sbjct: 99 GKVVVDVGCGTG----ILSIFCAQVGAKRVYAVDASEIAIQASAVVKANNLSDTVIVLHG 154
Query: 131 RIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 155 RVEDV-EIDEGVDVIIS 170
>gi|4104516|gb|AAD02056.1| unknown [Clostridium acetobutylicum DSM 1731]
Length = 244
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + D+G+G G I +I + + V ++ + + +Q
Sbjct: 102 ALERYVNEDAEVFDIGTGSG----ILAIAAAKLNAKKVLGVDLDSVAVKAAKENIQYNNV 157
Query: 124 RG-KVFACRIQEAPQMITTCDVISA 147
++ + E Q D+I A
Sbjct: 158 NNIEILHGNLMEVVQ--GKADIIVA 180
>gi|541428|pir||S41759 ribosomal protein L11 methyltransferase (EC 2.1.1.-) - Clostridium
acetobutylicum
Length = 300
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + D+G+G G I +I + + V ++ + + +Q
Sbjct: 169 ALERYVNEDAEVFDIGTGSG----ILAIAAAKLNAKKVLGVDLDSVAVKAAKENIQYNNV 224
Query: 124 RG-KVFACRIQEAPQMITTCDVISA 147
++ + E Q D+I A
Sbjct: 225 NNIEILHGNLMEVVQ--GKADIIVA 247
>gi|15887638|ref|NP_353319.1| Sun protein [Agrobacterium tumefaciens str. C58]
gi|15155185|gb|AAK86104.1| Sun protein [Agrobacterium tumefaciens str. C58]
Length = 429
Score = 38.5 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D +GGG G ++ S G V+ ++ K+ + + +++ R
Sbjct: 231 EGEQVLDYCAGGG--GKTLAMAASMNNKGQVHAFDADRKRLAPIIERLKRAGTRNVQVHD 288
Query: 131 RIQEAPQMITTCDVI 145
R D +
Sbjct: 289 RAAGLAPFQEKFDRV 303
>gi|119871751|ref|YP_929758.1| methyltransferase type 12 [Pyrobaculum islandicum DSM 4184]
gi|119673159|gb|ABL87415.1| Methyltransferase type 12 [Pyrobaculum islandicum DSM 4184]
Length = 254
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
S +++G+G G + + V +E + A +LR ++ + V R
Sbjct: 58 SSVLEVGAGAGAYAVPLA-----KRVSRVVAVEPSREMARYLRKYAEEEGVKVDVVEKRW 112
Query: 133 QEAP-QMITTCDVISARALADLDTLLE 158
+E + + D+ ALA L+E
Sbjct: 113 EEVSLEEVGRHDL----ALAAHSILVE 135
>gi|21223923|ref|NP_629702.1| DNA methylase [Streptomyces coelicolor A3(2)]
gi|4007726|emb|CAA22410.1| putative DNA methylase [Streptomyces coelicolor A3(2)]
Length = 195
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+DL +G G G+ S G V L+E+ + A +R V G +V A
Sbjct: 46 DGERVLDLYAGSGAVGLEAL----SRGAGHVLLVEADARAARTVRANVDSLGLPGAEVRA 101
Query: 130 CRIQEA---PQMITTCDVI 145
R ++ P DV+
Sbjct: 102 GRAEQIIRTPAPAEPYDVV 120
>gi|309778357|ref|ZP_07673282.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
3_1_53]
gi|308913888|gb|EFP59703.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
3_1_53]
Length = 203
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G G G GI+ + V +++ + + +K +
Sbjct: 60 GNQLLDMGCGYGVVGIVAKKAWPDKQ---VEMVDVNPRAVELAKDNAEKNNIEANIHVSD 116
Query: 132 IQEAPQMITTCDVIS---ARA 149
+ E T D+I+ RA
Sbjct: 117 VYEQVSGNTFTDIITNPPIRA 137
>gi|256784978|ref|ZP_05523409.1| DNA methylase [Streptomyces lividans TK24]
gi|289768870|ref|ZP_06528248.1| RsmD family RNA methyltransferase [Streptomyces lividans TK24]
gi|289699069|gb|EFD66498.1| RsmD family RNA methyltransferase [Streptomyces lividans TK24]
Length = 195
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+DL +G G G+ S G V L+E+ + A +R V G +V A
Sbjct: 46 DGERVLDLYAGSGAVGLEAL----SRGAGHVLLVEADARAARTVRANVDSLGLPGAEVRA 101
Query: 130 CRIQEA---PQMITTCDVI 145
R ++ P DV+
Sbjct: 102 GRAEQIIRTPAPAEPYDVV 120
>gi|218530637|ref|YP_002421453.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
gi|218522940|gb|ACK83525.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
Length = 341
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
HP P D+G G G GI+ + +L E V L++ R + +
Sbjct: 156 HPAPRRAADIGCGSGAAGILVAKRLPEAE---VVLVDINPAALRAARINARLAVVDNVRP 212
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + + D+I +
Sbjct: 213 VHSDM--LSNVEGSFDLIVS 230
>gi|111017889|ref|YP_700861.1| methyltransferase [Rhodococcus jostii RHA1]
gi|110817419|gb|ABG92703.1| probable methyltransferase [Rhodococcus jostii RHA1]
Length = 283
Score = 38.5 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 60 EDSLRVF---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DS+ + + P +D+G+G G + + Q + E V I+ + LR
Sbjct: 38 LDSVAEWVGQRTRDTPRRVVDVGAGTGVGSLTLARQFPAAE---VIAIDRSEMMLTRLRT 94
Query: 117 VVQKTAARGK--VFACRIQEAPQMITTCDVISA 147
G+ V + A + DV+ A
Sbjct: 95 AAHGQGLAGRVSVVHADLNVAWPAVGAADVVWA 127
>gi|328885737|emb|CCA58976.1| Protein-L-isoaspartate O-methyltransferase 1 [Streptomyces
venezuelae ATCC 10712]
Length = 437
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+++LG G PG+ ++ + GL +E A+F + + +V
Sbjct: 163 GQRYLELGPG---PGVSLALAAAITGPGLATGVERDGHMAAFAQRNLDHLGVGAEVIEGD 219
Query: 132 IQEAPQMITTCDVI 145
E + D I
Sbjct: 220 ALEGHEARAPYDRI 233
>gi|157693136|ref|YP_001487598.1| O-methyltransferase [Bacillus pumilus SAFR-032]
gi|157681894|gb|ABV63038.1| possible O-methyltransferase [Bacillus pumilus SAFR-032]
Length = 221
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 30/142 (21%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFL----FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+Y+ + + S + + +LE + ++ VS + L++ +
Sbjct: 10 DYIEHLIHPSPDAIAQLEAYAKEHHVPIMEK------VSI----ELL-------LQLLSM 52
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +++G+ G+ I + L E + IE K+ +++ + ++
Sbjct: 53 -KKPKKILEVGTAIGYSAIRMATALPDAE---IFTIERNAKRYEEATRNIEELKLKERIH 108
Query: 129 -----ACRIQEAPQMITTCDVI 145
A + Q + DVI
Sbjct: 109 VFFGDAMESAKTVQTMAPYDVI 130
>gi|16800228|ref|NP_470496.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria innocua
Clip11262]
gi|16413618|emb|CAC96390.1| lin1159 [Listeria innocua Clip11262]
Length = 189
Score = 38.5 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 13/110 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE ++ K
Sbjct: 22 SIDLLGLDNTSKKLLDVGAGTGSVGLQVAYNFPHIK---VTAIERNKDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVISARAL-----ADLDTLLEYSFPWLY 165
D I +L ++++S L
Sbjct: 79 GVENVAVIEAYAPIELSQEEKFDAI----FIGGSGGNLTDIIDWSLVHLK 124
>gi|317473462|ref|ZP_07932756.1| methyltransferase domain-containing protein [Anaerostipes sp.
3_2_56FAA]
gi|316899112|gb|EFV21132.1| methyltransferase domain-containing protein [Anaerostipes sp.
3_2_56FAA]
Length = 264
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
E+F+ R + D + +D+G+G G I ++ G I+ ++
Sbjct: 30 PEEFYQR-LLD----RGVCTLGQDVLDIGTGTGV--IPRNLY---SHGARFTGIDISGQQ 79
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + ++ P + + D ++A
Sbjct: 80 IEQAKKLAAAGHMDIRFLCTPAEDVPFLPGSFDAVTA 116
>gi|145297572|ref|YP_001140413.1| ribosomal RNA small subunit methyltransferase C [Aeromonas
salmonicida subsp. salmonicida A449]
gi|226712987|sp|A4SIE3|RSMC_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|142850344|gb|ABO88665.1| ribosomal RNA small subunit methyltransferase C [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 342
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + P +D G G G G + + + +E V +++ R + +
Sbjct: 196 LAAVPPMTGELLDFGCGAGVIGSVLAKRNPGLE---VKMVDISALALESSRRTLAINGLQ 252
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
G+V A + + D I +
Sbjct: 253 GQVQASDV--YSDITGKFDHIVS 273
>gi|119486111|ref|ZP_01620171.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106]
gi|119456602|gb|EAW37731.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106]
Length = 297
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG G G + E ++L + L+ +K +
Sbjct: 102 PRQILDLGCGTGSTTLRLKQAFPEAEVIGIDLS-PYMLVVAELK--AKKAGLEIQFHHAN 158
Query: 132 IQEAPQMITTCDVISA 147
++ + D++SA
Sbjct: 159 AEDTGFPDGSFDLVSA 174
>gi|78778556|ref|YP_396668.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. MIT 9312]
gi|78712055|gb|ABB49232.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. MIT 9312]
Length = 233
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 28/140 (20%)
Query: 36 FLKWSKKINLVSSSTVEDFWIR-----H---VEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
F +W+K S S + + H V+D + + +P + D G G G
Sbjct: 21 FERWNKIY---SKSDEINTVQKNIRKGHQKTVDDVVSYIKNYPELTKKSFCDAGCGVGSL 77
Query: 86 GIIT-SIQLSSIEGGLV--NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
I + + ++ + +I+ K+ +++ A + + Q+
Sbjct: 78 SIPLLRLGIKDLQVSDISCEMIKETKKR-------IKELALNKAKIKYEVCDLEQLKGLF 130
Query: 143 DVISARALADLDTLLEYSFP 162
DV+ LD + Y P
Sbjct: 131 DVVVC-----LDVFIHYPQP 145
>gi|15894566|ref|NP_347915.1| ribosomal protein L11 methyltransferase [Clostridium acetobutylicum
ATCC 824]
gi|18314338|sp|P45558|PRMA_CLOAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|15024213|gb|AAK79255.1|AE007641_1 SAM-dependent methyltransferase [Clostridium acetobutylicum ATCC
824]
gi|325508698|gb|ADZ20334.1| ribosomal protein L11 methyltransferase [Clostridium acetobutylicum
EA 2018]
Length = 311
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + D+G+G G I +I + + V ++ + + +Q
Sbjct: 169 ALERYVNEDAEVFDIGTGSG----ILAIAAAKLNAKKVLGVDLDSVAVKAAKENIQYNNV 224
Query: 124 RG-KVFACRIQEAPQMITTCDVISA 147
++ + E Q D+I A
Sbjct: 225 NNIEILHGNLMEVVQ--GKADIIVA 247
>gi|317010122|gb|ADU80702.1| hypothetical protein HPIN_07590 [Helicobacter pylori India7]
Length = 238
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGILGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFEGDFLDFNPPIL-YDAIVC 105
>gi|308185275|ref|YP_003929408.1| hypothetical protein HPSJM_07675 [Helicobacter pylori SJM180]
gi|308061195|gb|ADO03091.1| hypothetical protein HPSJM_07675 [Helicobacter pylori SJM180]
Length = 238
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFEGDFLDFNPPIL-YDAIVC 105
>gi|167569216|ref|ZP_02362090.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
oklahomensis C6786]
Length = 251
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+L + +DLG G G + V + + + + +
Sbjct: 30 LDTLAAEIGATPDARVLDLGCGAGHASFAAA----RGGAKEVVAYDLAPRMLATVEAAAR 85
Query: 120 KTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+ +V + P + D I +R
Sbjct: 86 ERGLASVRVEQGAAERLPFADASFDWIVSR 115
>gi|88858733|ref|ZP_01133374.1| aspartate aminotransferase [Pseudoalteromonas tunicata D2]
gi|83629180|gb|ABC26373.1| aspartate aminotransferase [Pseudoalteromonas tunicata]
gi|88818959|gb|EAR28773.1| aspartate aminotransferase [Pseudoalteromonas tunicata D2]
Length = 382
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 20/150 (13%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV---FQLHPYPSIWIDL 78
S E L +L + +KI+++S ++ + R DS V + + +
Sbjct: 176 SAEQLAQLAQKLTELAQHGQKIDVIS----DEAYARVTYDSASVPSIIDFYEHSIRVVSF 231
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS---FLR--YVVQKTAARGKVFACRIQ 133
G GI ++ ++ L + F+ + QK +G I+
Sbjct: 232 SKDLGLAGIRIGYIETTPNYRMLKLQDKLGAMIRNLGFVNTSTLAQKALLKGLNETVSIE 291
Query: 134 EAPQMITTCDVISARALADLDTL-LEYSFP 162
+A LD L + Y P
Sbjct: 292 YYQAQKDQI-------VAILDELNISYCAP 314
>gi|257462415|ref|ZP_05626829.1| methyltransferase [Fusobacterium sp. D12]
gi|317060079|ref|ZP_07924564.1| methyltransferase [Fusobacterium sp. D12]
gi|313685755|gb|EFS22590.1| methyltransferase [Fusobacterium sp. D12]
Length = 368
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ L +D+G+G G I + ++ E V I+ K S + +
Sbjct: 189 AKILSLEKENPSILDIGTGSGAIAITLAKEVPEAE---VLGIDKSEKALSLAKENKEYQL 245
Query: 123 ARGKVF-ACRIQEAPQMITTCDVISA 147
R F + EA Q D+I +
Sbjct: 246 VRNVSFLQSDLFEALQG-QRFDIIVS 270
>gi|255546199|ref|XP_002514159.1| protein arginine n-methyltransferase 1, putative [Ricinus communis]
gi|223546615|gb|EEF48113.1| protein arginine n-methyltransferase 1, putative [Ricinus communis]
Length = 387
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G+G G I S+ + V +E A + +V+
Sbjct: 100 KFLFKNKVVLDVGAGTG----ILSLFCAKAGAAHVYAVECSAM-ADMAKEIVESNGFSNV 154
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +++E + D+I +
Sbjct: 155 VTVLKGKVEELELPVAKVDIIIS 177
>gi|167561968|ref|ZP_02354884.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
oklahomensis EO147]
Length = 251
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+L + +DLG G G + V + + + + +
Sbjct: 30 LDTLAAEIGATPDARVLDLGCGAGHASFAAA----RGGAKEVVAYDLAPRMLATVEAAAR 85
Query: 120 KTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+ +V + P + D I +R
Sbjct: 86 ERGLASVRVEQGAAERLPFADASFDWIVSR 115
>gi|318042218|ref|ZP_07974174.1| putative methyltransferase [Synechococcus sp. CB0101]
Length = 248
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 9/98 (9%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D+LR+ Q +D G G G + + L +E + +N++ F+
Sbjct: 85 IADTLRL-QAQFACGHVLDFGGGIGTHALAAA-ALPQVEAVWFVDLNPENRR--FVEARA 140
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL 156
++ + K+ R EAP++ D I LD L
Sbjct: 141 ERFGLQQKLRCFRDLEAPELPAQFDTIVC-----LDVL 173
>gi|226525304|gb|ACO70903.1| protein-(glutamine-N5) methyltransferase release factor-specific
[uncultured Verrucomicrobia bacterium]
Length = 280
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 28/88 (31%), Gaps = 6/88 (6%)
Query: 63 LRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L V + P +D+G+G G + ++ + ++ + + R
Sbjct: 104 LVVAEFKKRSVSPRRILDVGTGSGVIALTLAMTWPD---AAMEAVDVSPEALTLARENAA 160
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++ + D++ A
Sbjct: 161 RLGLADRIRLVESDLFAAVEGEFDLVVA 188
>gi|239928030|ref|ZP_04684983.1| hypothetical protein SghaA1_07386 [Streptomyces ghanaensis ATCC
14672]
gi|291436364|ref|ZP_06575754.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291339259|gb|EFE66215.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 217
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 12/91 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G G G + + G V ++ K + ++ G+
Sbjct: 47 PVSVLDVGCGTGSLSKLLAEA-----GHHVTGVDLTPKMVDQAQAKLRVAGLEGRFLVGD 101
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFP 162
P DV+ +R L ++ P
Sbjct: 102 AANPPTGGEQFDVLLSR-------HLVWTLP 125
>gi|1246430|emb|CAA48793.1| orfB [Clostridium acetobutylicum]
Length = 298
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + D+G+G G I +I + + V ++ + + +Q
Sbjct: 169 ALERYVNEDAEVFDIGTGSG----ILAIAAAKLNAKKVLGVDLDSVAVKAAKENIQYNNV 224
Query: 124 RG-KVFACRIQEAPQMITTCDVISA 147
++ + E Q D+I A
Sbjct: 225 NNIEILHGNLMEVVQ--GKADIIVA 247
>gi|229082543|ref|ZP_04215006.1| Protein hemK [Bacillus cereus Rock4-2]
gi|228700975|gb|EEL53498.1| Protein hemK [Bacillus cereus Rock4-2]
Length = 283
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I ++ E V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLAL---ENENLHVYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|118595205|ref|ZP_01552552.1| SAM (and some other nucleotide) binding motif [Methylophilales
bacterium HTCC2181]
gi|118440983|gb|EAV47610.1| SAM (and some other nucleotide) binding motif [Methylophilales
bacterium HTCC2181]
Length = 282
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK--KASFLR 115
H+ D L + + P +DLG G G G+ S + + + +L + + K FL
Sbjct: 31 HLYDKLALINIDPQ--SVLDLGCGTGRNGVRLSERFKAGKLVNYDLSDEMLRLTKDKFLE 88
Query: 116 Y--VVQKTAARGKVFACRIQEAPQMITTCDVI 145
+ + A I++ P + D+I
Sbjct: 89 LFPLPSRMADTSHYICGDIEQLPFQDNSFDLI 120
>gi|94968650|ref|YP_590698.1| demethylmenaquinone methyltransferase [Candidatus Koribacter
versatilis Ellin345]
gi|94550700|gb|ABF40624.1| demethylmenaquinone methyltransferase [Candidatus Koribacter
versatilis Ellin345]
Length = 251
Score = 38.2 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+ SG G P I + L++ G V + ++ + + F +
Sbjct: 21 RVLDVASGTGEPAISIATALNAT--GRVIATDISSEPLTIGEQRAHERGLTNIEFQHADV 78
Query: 133 QEAPQMITTCDVISAR 148
+ P + D++++R
Sbjct: 79 HDLPFPDNSFDLVTSR 94
>gi|304396475|ref|ZP_07378356.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB]
gi|304355984|gb|EFM20350.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB]
Length = 343
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVEDS---LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R DS L + P+ +D+G G G + +
Sbjct: 167 LT-IHTLPGVFSRDGLDSGSALLLSTFTPHTKGKVLDMGCGAGVIAASLPARSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + + + G+VFA + + D+I +
Sbjct: 223 LWLCDVHAAAIEASKLTLAANGIEGEVFASNV--FSDVTGRFDMIIS 267
>gi|237731779|ref|ZP_04562260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Citrobacter sp. 30_2]
gi|226907318|gb|EEH93236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Citrobacter sp. 30_2]
Length = 277
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 36/142 (25%), Gaps = 15/142 (10%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSST---------VEDFWIRHVEDSL---RV 65
++ ++L+ + +L R + L +
Sbjct: 44 ETELTEAQRQQLDTLLERRQRGEPVAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQAL 103
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+L +DLG+G G + + + V ++ + Q+
Sbjct: 104 ARLPASACRILDLGTGTGAIALALATERPDC---AVTAVDRMPDAVALAIRNKQQLGINN 160
Query: 126 KVFACRIQEAPQMITTCDVISA 147
+ D+I +
Sbjct: 161 VCVLQSNWFSALQGQQFDMIVS 182
>gi|15606087|ref|NP_213464.1| hypothetical protein aq_674 [Aquifex aeolicus VF5]
gi|2983274|gb|AAC06868.1| hypothetical protein aq_674 [Aquifex aeolicus VF5]
Length = 239
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 8/89 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + IDLG+G GF SI L+ G V E + LR V+
Sbjct: 35 LSKIKPPKRNYRIIDLGAGFGF----LSITLAKKYGVKVVAFEYDERMVKLLRKNVKLNG 90
Query: 123 AR--GKVFACRIQEAPQM--ITTCDVISA 147
+V I+E + + +++ +
Sbjct: 91 VEHLVEVVEGDIKEIEKHLSRGSFNLVVS 119
>gi|317037326|ref|XP_001398973.2| HNRNP arginine N-methyltransferase [Aspergillus niger CBS 513.88]
Length = 348
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 44 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 99
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V + + + +++E D+I +
Sbjct: 100 EKAREI-VAVNGLSDKITLLQGKMEEVVLPYPKVDIIIS 137
>gi|296101375|ref|YP_003611521.1| methyltransferase type 11 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055834|gb|ADF60572.1| methyltransferase type 11 [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 257
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 22/77 (28%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR 131
+ +DLG G G + V + ++ + +
Sbjct: 47 ATVLDLGCGAGHASFTAA-----QHVAQVTAYDLSSQMLEVVAEAAKAKGLNNVDTRQGY 101
Query: 132 IQEAPQMITTCDVISAR 148
+ P + DV+ +R
Sbjct: 102 AESLPFEEASFDVVISR 118
>gi|218900454|ref|YP_002448865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus G9842]
gi|218544940|gb|ACK97334.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus G9842]
Length = 283
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------KELHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|225445416|ref|XP_002285026.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 381
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ H +D+G+G G I +I + V +E+ K + R +V+ +
Sbjct: 64 KHHFRGKAVLDVGTGSG----ILAIWSAQAGARKVYAVEAT-KMSEHARELVKANNLQDI 118
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+V +++ + DVI +
Sbjct: 119 VEVIEGSVEDV-TLPEKVDVIIS 140
>gi|134084565|emb|CAK97441.1| unnamed protein product [Aspergillus niger]
Length = 349
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 44 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 99
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V + + + +++E D+I +
Sbjct: 100 EKAREI-VAVNGLSDKITLLQGKMEEVVLPYPKVDIIIS 137
>gi|153003144|ref|YP_001377469.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp.
Fw109-5]
gi|152026717|gb|ABS24485.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp.
Fw109-5]
Length = 286
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G+G G +I + + G V ++ + R + A ++
Sbjct: 151 GASVLDVGTGSGL----LAIAAAKLGAGRVAANDNDPVAVAVARENADRNGAALELTGAA 206
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYS 160
+ E T D++ A LA +TL+E +
Sbjct: 207 VGEIA---GTFDLVVANILA--NTLVELA 230
>gi|116250586|ref|YP_766424.1| hypothetical protein RL0814 [Rhizobium leguminosarum bv. viciae
3841]
gi|32261059|emb|CAE00210.1| putative methyltransferase [Rhizobium leguminosarum bv. viciae
3841]
gi|115255234|emb|CAK06309.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 280
Score = 38.2 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK---ASFLRYVVQ 119
+ + P P +D+G+G G + EG V +E A +R +
Sbjct: 50 AIREFLPQAPGTAVDIGAGRGIASYALA-----KEGFEVTALEPDASDLVGAGAIRALFN 104
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ + + P DV+ ARA+
Sbjct: 105 EVHLPISIAEEFSERLPFSDNAFDVVFARAV 135
>gi|303270819|ref|XP_003054771.1| protein arginine methyltransferase [Micromonas pusilla CCMP1545]
gi|226462745|gb|EEH60023.1| protein arginine methyltransferase [Micromonas pusilla CCMP1545]
Length = 389
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFA 129
+ +D+G+G G I +I + V +E+ R ++ V
Sbjct: 72 DKVVLDVGTGSG----ILAIWAAQAGAKKVYAVEATYMATHA-RKLIAANGLENVITVMQ 126
Query: 130 CRIQEAPQMITTCDVISA 147
++E ++ DVI +
Sbjct: 127 STVEEV-ELPEKVDVIIS 143
>gi|255935369|ref|XP_002558711.1| Pc13g02720 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583331|emb|CAP91341.1| Pc13g02720 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 347
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 43 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAARAGAKHVIGVDMSSII 98
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V + + + +++E D+I +
Sbjct: 99 EKARQIVEV-NGLSDKITLLQGKMEEVNLPFPKVDIIIS 136
>gi|206895554|ref|YP_002247219.1| ribosomal protein L11 methyltransferase [Coprothermobacter
proteolyticus DSM 5265]
gi|206738171|gb|ACI17249.1| ribosomal protein L11 methyltransferase [Coprothermobacter
proteolyticus DSM 5265]
Length = 251
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 8/92 (8%)
Query: 63 LRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + + P +D+G+G G I +I V ++ + +
Sbjct: 114 LVLLSILPLQGKSLLDVGTGSG----ILAIYAKKRGCSKVTGVDIDP---ISVENALDNA 166
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADL 153
+ + +A ++ DV+SA + DL
Sbjct: 167 KLNDVDISFEVADAYELKGEYDVVSANLVTDL 198
>gi|255639209|gb|ACU19903.1| unknown [Glycine max]
Length = 376
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G+G G I S+ + V +E + A + +V+
Sbjct: 89 RFLFKNKVVLDVGAGTG----ILSLFCAKAGAEHVYAVECSHM-ADMAKEIVEANGYSNV 143
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E + D+I +
Sbjct: 144 VTVLKGKIEEIELPVAKVDIIIS 166
>gi|229196423|ref|ZP_04323170.1| Methyltransferase type 12 [Bacillus cereus m1293]
gi|228587060|gb|EEK45131.1| Methyltransferase type 12 [Bacillus cereus m1293]
Length = 292
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 39/127 (30%), Gaps = 12/127 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
W+ K L D + S V P +D G G G+ G+I L
Sbjct: 5 DWNSK--LTYLKNTRDLYYNDDYVSFLVNTVWRITKPVHIVDYGCGYGYLGLILMPLLP- 61
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+G I+S + R + + + E ++ D+ A
Sbjct: 62 -KGSKYTGIDSGGTLIAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAICHAF----- 114
Query: 156 LLEYSFP 162
LL + P
Sbjct: 115 LLHMTTP 121
>gi|206975144|ref|ZP_03236058.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|206746565|gb|EDZ57958.1| conserved hypothetical protein [Bacillus cereus H3081.97]
Length = 292
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 39/127 (30%), Gaps = 12/127 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
W+ K L D + S V P +D G G G+ G+I L
Sbjct: 5 DWNSK--LTYLKNTRDLYYNDDYVSFLVNTVWRITKPVHIVDYGCGYGYLGLILMPLLP- 61
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+G I+S + R + + + E ++ D+ A
Sbjct: 62 -KGSKYTGIDSGGTLIAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAICHAF----- 114
Query: 156 LLEYSFP 162
LL + P
Sbjct: 115 LLHMTTP 121
>gi|320167100|gb|EFW43999.1| Hemk1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 459
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L++ L P +++G G G G+ L+ + G ++ R Q+
Sbjct: 277 LQISLLVNRPPCILEVGPGTGAIGLSI---LAELPGLHYLALDVNPFACELTRVNAQRLG 333
Query: 123 ARGK--VFACRIQEAPQMITTCDVISA 147
+ V ++ + D I +
Sbjct: 334 LESRTAVHHVAFEQFTLLEGQFDAIVS 360
>gi|270291032|ref|ZP_06197255.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
gi|270280428|gb|EFA26263.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
Length = 285
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 32/105 (30%), Gaps = 12/105 (11%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ H+ + +D+G+G G I ++ + V++
Sbjct: 92 LIPRVETEELVE-HILN---AHPQLNQSLRVLDIGTGSGNIAITLKLERPDWQVTAVDIA 147
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI--TTCDVISA 147
+ L Q + V R + D+I +
Sbjct: 148 ------SEALAVAQQNAHQQEAVVDFRQGSLFDAVKGERFDIIVS 186
>gi|294494828|ref|YP_003541321.1| methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
gi|292665827|gb|ADE35676.1| Methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
Length = 278
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
H S +D+G+G G I + V +E + L+ +
Sbjct: 61 HDSDSRILDIGAGPGSMAIPLA-----QRVSHVTAVEPADGMTEVLKENIADYNLDNVTC 115
Query: 128 FACRIQE--APQMITTCDVISA 147
++ ++ DVI A
Sbjct: 116 IQKNWEDVAVEELDGMYDVIIA 137
>gi|291566902|dbj|BAI89174.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 442
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 50/137 (36%), Gaps = 15/137 (10%)
Query: 15 LLNTYNVSRETLEKLE--YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LH 69
++N ++ R+ E+ + + + ++ S + + E +I ++ + +
Sbjct: 3 IINESDLQRKIREQFDFTQYPKIPVEESPQ------TDYERLYIHNLVTPYYLRNQQVIK 56
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D G G G+ + ++ G + I+ K R ++ F
Sbjct: 57 TEGKVILDAGCGSGYKALALALANP---GAKIVGIDISEKSVEASRNRLKYHGIENAEFH 113
Query: 130 C-RIQEAPQMITTCDVI 145
I+E P + D I
Sbjct: 114 AMYIEELPSLGWEFDYI 130
>gi|268610815|ref|ZP_06144542.1| putative methyltransferase [Ruminococcus flavefaciens FD-1]
Length = 198
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P DLG G G+ + + +++ + KKA + ++ R K+
Sbjct: 39 IPGNGKVADLGCGSGYNIRRMLEMSAKAKFIGLDISDESVKKAQKVNK--EELGKRVKII 96
Query: 129 ACRIQEAPQMITTCDVISA 147
++ P + D+I+A
Sbjct: 97 KGSAEKLPFKDNSIDLITA 115
>gi|284052982|ref|ZP_06383192.1| methyltransferase type 11 [Arthrospira platensis str. Paraca]
gi|291571130|dbj|BAI93402.1| putative methyltransferase [Arthrospira platensis NIES-39]
Length = 289
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 10/99 (10%)
Query: 51 VEDFWIRH-VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ W+R D++ V P +DLG G G ++ + E V ++
Sbjct: 83 PNETWVRQEAIDTITV-----KPRRILDLGCGTGSTTLLLKQTFPNAE---VIGLDLSPY 134
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITT-CDVISA 147
+ ++ K + +E+ + D+++A
Sbjct: 135 MLAVAETKAKQAGLDIKFYHGLAEESDRFEPQSFDLVTA 173
>gi|308185569|ref|YP_003929700.1| ribosomal RNA small subunit methyltransferase [Pantoea vagans C9-1]
gi|308056079|gb|ADO08251.1| ribosomal RNA small subunit methyltransferase [Pantoea vagans C9-1]
Length = 379
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVEDS---LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R DS L + P+ +D+G G G + +
Sbjct: 203 LT-IHTLPGVFSRDGLDSGSALLLSTFTPHTKGKVLDMGCGAGVIAASLPARSPKVR--- 258
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + + + G+VFA + + D+I +
Sbjct: 259 LWLCDVHAAAIEASKLTLAANGIEGEVFASNV--FSDVTGRFDMIIS 303
>gi|317051904|ref|YP_004113020.1| O-methyltransferase family 3 [Desulfurispirillum indicum S5]
gi|316946988|gb|ADU66464.1| O-methyltransferase family 3 [Desulfurispirillum indicum S5]
Length = 229
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 25/86 (29%), Gaps = 3/86 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L P +++G+G GF +E +K+ R + ++
Sbjct: 52 LSSLTALSRPRSILEIGTGAGFSTHALMEGADRKTLERFVTLEFNHKRLEVARQMAERLG 111
Query: 123 ARGKV---FACRIQEAPQMITTCDVI 145
+V ++ D I
Sbjct: 112 WANRVQMLHTNALEFMACNRDDFDFI 137
>gi|260771831|ref|ZP_05880749.1| ribosomal RNA small subunit methyltransferase C [Vibrio
metschnikovii CIP 69.14]
gi|260613123|gb|EEX38324.1| ribosomal RNA small subunit methyltransferase C [Vibrio
metschnikovii CIP 69.14]
Length = 340
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ DSL Q +D G G G G + SI I+ + + + + +
Sbjct: 193 LLDSLPSLQ-----GKVLDFGCGAGVLGCVMSILNPEIQ---LEMCDISALAIYSSQATL 244
Query: 119 QKTAARGKVFACRI 132
G+VFA +
Sbjct: 245 AANGLTGRVFASDV 258
>gi|251771815|gb|EES52390.1| modification methylase, HemK family [Leptospirillum
ferrodiazotrophum]
Length = 308
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 25/95 (26%), Gaps = 6/95 (6%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+ +RH P +DLGSG G + ++ V E
Sbjct: 122 ELALRH-----TAASKGREPLRILDLGSGSGVIALSFLLERPEARAVAVER-EPLALATL 175
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R V +E D I +
Sbjct: 176 LENRRRHRLVDRLAVVRGDWEEMFGERPVFDCILS 210
>gi|254037381|ref|ZP_04871458.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
1_1_43]
gi|226840487|gb|EEH72489.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
1_1_43]
gi|323935213|gb|EGB31573.1| methyltransferase small domain-containing protein [Escherichia coli
E1520]
Length = 343
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|56552550|ref|YP_163389.1| 3-demethylubiquinone-9 3-methyltransferase [Zymomonas mobilis
subsp. mobilis ZM4]
gi|241762209|ref|ZP_04760291.1| ubiquinone biosynthesis O-methyltransferase [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|260753792|ref|YP_003226685.1| 3-demethylubiquinone-9 3-methyltransferase [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|56544124|gb|AAV90278.1| ubiquinone biosynthesis O-methyltransferase [Zymomonas mobilis
subsp. mobilis ZM4]
gi|241373256|gb|EER62875.1| ubiquinone biosynthesis O-methyltransferase [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|258553155|gb|ACV76101.1| ubiquinone biosynthesis O-methyltransferase [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 263
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 21/132 (15%)
Query: 39 WSK--------KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
W+ ++N V S + ++ S +D+G G G
Sbjct: 44 WNPFGSSAMLHRMNPVRLSYIRQAIDQYFV-SAFGNPFPLMGKSVLDIGCGAGLLSEPLC 102
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL 150
GG V +++ + + + ++ + ++ T D+I+A
Sbjct: 103 RL-----GGDVTGVDAAFENIAVAKAHAEEQHLNIRYLTGELESVED--TNFDLITA--- 152
Query: 151 ADLDTLLEYSFP 162
++ L + P
Sbjct: 153 --MEVLEHVAEP 162
>gi|229072795|ref|ZP_04205994.1| Protein hemK [Bacillus cereus F65185]
gi|228710286|gb|EEL62261.1| Protein hemK [Bacillus cereus F65185]
Length = 283
Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I ++ E V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLAL---ENENLHVYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|15602823|ref|NP_245895.1| 16S ribosomal RNA m2G1207 methyltransferase [Pasteurella multocida
subsp. multocida str. Pm70]
gi|81856739|sp|Q9CM79|RSMC_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|12721282|gb|AAK03042.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 328
Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 17/97 (17%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +DLG G G G Q +E + + + + + + + +V
Sbjct: 186 QPVRGKVLDLGCGAGVIGAYIKQQYPQVE---LTMADIHALALASSQRTLAENQLEAEVI 242
Query: 129 ACRIQEAPQMITTCDVISA------------RALADL 153
A + + D+I + RA+++L
Sbjct: 243 ASDV--FSNVAGKFDLIISNPPFHDGIDTAYRAVSEL 277
>gi|332970820|gb|EGK09799.1| protein-(glutamine-N5) methyltransferase [Psychrobacter sp.
1501(2011)]
Length = 300
Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 23/137 (16%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVED-------SLRVFQLHP--YPSIWIDLGS 80
+ F+ L + ++ L+ + + V D SL V P P +DLG+
Sbjct: 76 QAFWSLEFEVNEYT-LI-PRPDTEVLVEQVLDWITQHKNSLSVLNDEPILAPYQLLDLGT 133
Query: 81 GGGFPGIITSIQLSSI--EGGLVNLIE------SKNKKASFLRYVVQKTAARGKVFAC-- 130
G G I + +L++I + V ++ + K+ + L V + F+
Sbjct: 134 GSGCIAISLAHELATIYPKQWQVTALDFSTEALAVAKRNAQLNAVSNIQFLQSDWFSALK 193
Query: 131 RIQEAPQMITTCDVISA 147
R ++ Q + D+I +
Sbjct: 194 RSEDTDQPL--FDIIVS 208
>gi|206970195|ref|ZP_03231148.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus AH1134]
gi|206734772|gb|EDZ51941.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus AH1134]
Length = 283
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I ++ E V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLAL---ENENLHVYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|289616517|emb|CBI56682.1| unnamed protein product [Sordaria macrospora]
Length = 345
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 9/100 (9%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ + S+ + I +D+G G G I S+ ++ V ++
Sbjct: 39 KDEVRTKSYMHSIVQNKHLFKDKIVLDVGCGTG----ILSMFAANAGAKHVFGVDMST-- 92
Query: 111 ASF-LRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
F R +V+ K+ +++E + D+I +
Sbjct: 93 IIFKAREIVEVNGLSDKITLIQGKMEEIKLPVGEVDIIIS 132
>gi|225556504|gb|EEH04792.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 319
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 18/117 (15%)
Query: 47 SSSTVEDF----WIRHVE------DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
S + ++ H+ D + + + P P +D+G+G G I +
Sbjct: 40 SPNDEDEQDRMDLTHHIYKLLLGGD-IYISPIKPNPQRVLDIGTGTGIWAIDFADAHPES 98
Query: 97 E--GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
+ G ++ I+ + AS R ++ A D I AR LA
Sbjct: 99 QVVGNDLSPIQPSCQLASTCR-----VPTNCVFEIDDLEAAWPYTRPFDFIHARELA 150
>gi|224091294|ref|XP_002309219.1| arginine methyltransferease [Populus trichocarpa]
gi|222855195|gb|EEE92742.1| arginine methyltransferease [Populus trichocarpa]
Length = 328
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G+G G I S+ + V +E + A+ + +V+
Sbjct: 41 KFLFKDKVVLDVGAGTG----ILSLFCAKAGAAHVYAVECSH-IANMAKEIVESNGFSNV 95
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I++ + D+I +
Sbjct: 96 ITVLKGKIEDIELPVAKVDIIIS 118
>gi|325294547|ref|YP_004281061.1| O-methyltransferase family 3 [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325064995|gb|ADY73002.1| O-methyltransferase family 3 [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 220
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 7/87 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR+ P +++G+G G+ + + + ++S K++ + ++
Sbjct: 54 LRLLVSLTKPKRVLEIGTGIGYSTLNIYFAHPEAK---ITTVDSNRKRSVVAKKFFKRAG 110
Query: 123 ARGKVFACR----IQEAPQMITTCDVI 145
+V I++ D I
Sbjct: 111 IEIEVLEADGFKVIRDYLAENEKFDFI 137
>gi|324998996|ref|ZP_08120108.1| type 11 methyltransferase [Pseudonocardia sp. P1]
Length = 252
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 23/121 (19%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L++ P +D+G G G + + + V+L E ++ R V
Sbjct: 31 LQLAGELPDRPRIVDIGCGTGPATLPLAAATGG-DVVAVDLHEPYLRRLQA-RAAVSGLG 88
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----------RALADLDTLL-----------EYSF 161
R + + + P D++ + ALA LL E++
Sbjct: 89 ERVRPLVAPMDDLPLPDGEADLVWSEGAAYVMGFDAALASWRRLLAPDGVLVLTEAEWTT 148
Query: 162 P 162
P
Sbjct: 149 P 149
>gi|260912922|ref|ZP_05919407.1| ribosomal RNA small subunit methyltransferase C [Pasteurella
dagmatis ATCC 43325]
gi|260632912|gb|EEX51078.1| ribosomal RNA small subunit methyltransferase C [Pasteurella
dagmatis ATCC 43325]
Length = 328
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 17/93 (18%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DLG G G G Q + V + + + + + + V A +
Sbjct: 190 GKVLDLGCGAGVIGAYIKQQNPKTQ---VIMTDIHAMALASAKRTLAENKLEADVLASDV 246
Query: 133 QEAPQMITTCDVISA------------RALADL 153
+ D+I + RA+++L
Sbjct: 247 --FSHIEGKFDLIISNPPFHDGVDTAYRAVSEL 277
>gi|85858480|ref|YP_460682.1| SAM-dependent methyltransferase [Syntrophus aciditrophicus SB]
gi|85721571|gb|ABC76514.1| SAM-dependent methyltransferase [Syntrophus aciditrophicus SB]
Length = 257
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 12/91 (13%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ + D + +D+G G G + L +G V +E K
Sbjct: 28 EKLILD----LSMPRTGERLLDVGCGTG-----EHLLLFRNQGCSVTGVERSLDKI---E 75
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
K R ++A ++ P D+++
Sbjct: 76 SARNKLGHRADIYAGEAEDLPFSDNEFDIVT 106
>gi|57504746|ref|ZP_00370800.1| conserved hypothetical protein [Campylobacter coli RM2228]
gi|305433049|ref|ZP_07402205.1| possible rRNA methyltransferase [Campylobacter coli JV20]
gi|57019402|gb|EAL56100.1| conserved hypothetical protein [Campylobacter coli RM2228]
gi|304443750|gb|EFM36407.1| possible rRNA methyltransferase [Campylobacter coli JV20]
Length = 233
Score = 38.2 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + + +++GSG G GI+ +S+++ ++L++ + + +
Sbjct: 19 DSLLLADFVLEMGIKNQVLEVGSGCGIIGILLKKFVSNLD---LSLLDIQQENIELIHRN 75
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ + V Q D I
Sbjct: 76 LKQNNIQAGVLHEDF-RNFQNDKKFDFIVC 104
>gi|294634635|ref|ZP_06713169.1| ribosomal RNA small subunit methyltransferase [Edwardsiella tarda
ATCC 23685]
gi|291091965|gb|EFE24526.1| ribosomal RNA small subunit methyltransferase [Edwardsiella tarda
ATCC 23685]
Length = 373
Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 29/99 (29%), Gaps = 9/99 (9%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
D + SL H +D+G G G + + L +
Sbjct: 204 RDGLDIGSHLLLSSL----PHGLKGRVLDVGCGAGVLSAAIARMSPET---TLTLCDVNA 256
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + + G+V A + + D+I +
Sbjct: 257 AALAASRQTLAQNDIPGEVIASNV--FSDIDGRFDLIIS 293
>gi|159123330|gb|EDP48450.1| ubiE/COQ5 methyltransferase, putative [Aspergillus fumigatus A1163]
Length = 276
Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 2/85 (2%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G G G + + + V L S ++A L +
Sbjct: 31 AYLLPHLRPDMHILDVGCGPGTITVDLARLIPQGHITGVELSPSVLEQARAL--AADQAL 88
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ P T D++
Sbjct: 89 TNVTFLSADANALPFEEGTFDLVLC 113
>gi|70986829|ref|XP_748902.1| ubiE/COQ5 methyltransferase [Aspergillus fumigatus Af293]
gi|66846532|gb|EAL86864.1| ubiE/COQ5 methyltransferase, putative [Aspergillus fumigatus Af293]
Length = 276
Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 2/85 (2%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G G G + + + V L S ++A L +
Sbjct: 31 AYLLPHLRPDMHILDVGCGPGTITVDLARLIPQGHITGVELSPSVLEQARAL--AADQAL 88
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ P T D++
Sbjct: 89 TNVTFLSADANALPFEEGTFDLVLC 113
>gi|258646706|ref|ZP_05734175.1| SmtA protein [Dialister invisus DSM 15470]
gi|260404134|gb|EEW97681.1| SmtA protein [Dialister invisus DSM 15470]
Length = 249
Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G GF + +++ E+ ++A+ + + + Q
Sbjct: 49 ILDVGTGPGF--FPVLLGEKGHHVTGIDITENMIRRAA---ENISAAGVKADLAVMDCQN 103
Query: 135 APQMITTCDVISAR 148
+ D++ R
Sbjct: 104 IQYHDESFDLVVCR 117
>gi|228968457|ref|ZP_04129446.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001]
gi|228791237|gb|EEM38850.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001]
Length = 283
Score = 38.2 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------KELHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKAGQKLDVVVS 187
>gi|262274964|ref|ZP_06052775.1| 16S RNA G1207 methylase RsmC [Grimontia hollisae CIP 101886]
gi|262221527|gb|EEY72841.1| 16S RNA G1207 methylase RsmC [Grimontia hollisae CIP 101886]
Length = 341
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D G G G G + + + L++ + R ++ G+VFA +
Sbjct: 201 GSVLDFGCGAGVIGAVIKQRYPETH---ITLVDISALAVASARETLRFNHLDGEVFASDV 257
Query: 133 QEAPQMITTCDVISA 147
+ T + I +
Sbjct: 258 --YSDINTPFNNIVS 270
>gi|228955576|ref|ZP_04117578.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|229181576|ref|ZP_04308902.1| Protein hemK [Bacillus cereus 172560W]
gi|229193580|ref|ZP_04320524.1| Protein hemK [Bacillus cereus ATCC 10876]
gi|228589885|gb|EEK47760.1| Protein hemK [Bacillus cereus ATCC 10876]
gi|228601944|gb|EEK59439.1| Protein hemK [Bacillus cereus 172560W]
gi|228804104|gb|EEM50721.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001]
Length = 283
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I ++ E V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLAL---ENENLHVYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|329298871|ref|ZP_08256207.1| 3-oxoacyl-ACP reductase [Plautia stali symbiont]
Length = 188
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GG GI +I ++ G I ++ + L V T R + A + A +
Sbjct: 12 GGSSGIGLAIARRFVQEGAHVFI--TGRREAQLAAAVTLTGGRIEAIAGDLTSADDVARL 69
Query: 142 CDVISARALADLDTLL 157
D + ARA LD L+
Sbjct: 70 FDTVQARA-GRLDILV 84
>gi|321442015|gb|ADW85422.1| arg methyltransferase [Poecilocampa populi]
Length = 244
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+ G
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGATKVIAVECSN-IVDYARKIVEANGLSGV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVDKVDIIIS 95
>gi|20089725|ref|NP_615800.1| hypothetical protein MA0841 [Methanosarcina acetivorans C2A]
gi|19914657|gb|AAM04280.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 302
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ + L +P S +D+G G G + S + V ++ + L+ V
Sbjct: 74 ILEFLEEAGFNPEGSRVLDIGCGPGTLSLPLSRLGAE-----VTALDISSGMLDRLKDAV 128
Query: 119 QKTAARGKVFAC-----RIQEAPQMITTCDVISA 147
+K + V C I E D++ A
Sbjct: 129 KKESLPVDVIECSWWTADIDELG-FRNKFDLVIA 161
>gi|228949049|ref|ZP_04111321.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228810622|gb|EEM56971.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 283
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNL---YVYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|15612462|ref|NP_224115.1| hypothetical protein jhp1397 [Helicobacter pylori J99]
gi|4156002|gb|AAD06963.1| putative [Helicobacter pylori J99]
Length = 238
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|83310710|ref|YP_420974.1| 3-demethylubiquinone-9 3-methyltransferase [Magnetospirillum
magneticum AMB-1]
gi|109895673|sp|Q2W6W0|UBIG_MAGMM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|82945551|dbj|BAE50415.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
[Magnetospirillum magneticum AMB-1]
Length = 249
Score = 38.2 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 17/101 (16%)
Query: 54 FWIRHVE------DSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
F RH +SL + P+ +D+GSGGG + G V I++
Sbjct: 47 FMRRHFAAHFGRDESL----MRPFEGLTLLDVGSGGGLLSEPLARM-----GFAVTGIDA 97
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+K + R ++T ++ DV+ +
Sbjct: 98 GDKNVAVARLHAEQTGVPVDYRVSTPEQL-DPNEAFDVVLS 137
>gi|297826511|ref|XP_002881138.1| ATCOQ3 [Arabidopsis lyrata subsp. lyrata]
gi|297326977|gb|EFH57397.1| ATCOQ3 [Arabidopsis lyrata subsp. lyrata]
Length = 323
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 10/108 (9%)
Query: 43 INLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+N + + RH S P+ +ID+G GGG + G V
Sbjct: 105 MNPTRLAFIRSTLCRHF--SKDPSSAKPFEGLRFIDIGCGGGLLSEPLARM-----GATV 157
Query: 102 NLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ +K K + L + + + + D + +
Sbjct: 158 TGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEMLADEGRKFDAVLS 205
>gi|288576289|ref|ZP_06394294.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria mucosa ATCC
25996]
gi|288565811|gb|EFC87371.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria mucosa ATCC
25996]
Length = 239
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS +D+G GGG I S ++ V I+ K +
Sbjct: 46 IDSFA----QLAGKRVLDVGCGGG----ILSESMAKRGAAHVTGIDMAEKSLQTAQAHAA 97
Query: 120 KTAARGKVFAC-RIQE-APQMITTCDVISA 147
+ C R+++ A + + DV++
Sbjct: 98 AEGVDNIDYRCIRVEDLAAEQPHSFDVVTC 127
>gi|152989353|ref|YP_001347016.1| hypothetical protein PSPA7_1632 [Pseudomonas aeruginosa PA7]
gi|150964511|gb|ABR86536.1| hypothetical protein PSPA7_1632 [Pseudomonas aeruginosa PA7]
Length = 357
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 25/98 (25%), Gaps = 9/98 (9%)
Query: 55 WIRHVE-----DSL-RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
W +H SL V + +D G G G I+ + + V +
Sbjct: 154 WYKHFLVEHWIPSLDGVKEKLQAGGSVLDFGCGSGLAAIMMAKAFPEAQ---VYGCDFHG 210
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
R + +V D ++
Sbjct: 211 PSIERARANAEAAGVGDRVRFEVADSDALAGKKFDFVT 248
>gi|146302781|ref|YP_001197372.1| HemK family modification methylase [Flavobacterium johnsoniae
UW101]
gi|146157199|gb|ABQ08053.1| modification methylase, HemK family [Flavobacterium johnsoniae
UW101]
Length = 284
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G G + + ++ V I+ K + +
Sbjct: 115 KEKIKILDIGTGSGCIAVSLA---KNLPNADVYAIDVSKKAIETAKRNAIRNDVNVTFIF 171
Query: 130 CRIQEAPQMITTCDVISA 147
I +A ++ DVI +
Sbjct: 172 QDILQAEELKCKYDVIVS 189
>gi|89054513|ref|YP_509964.1| hypothetical protein Jann_2022 [Jannaschia sp. CCS1]
gi|88864062|gb|ABD54939.1| Methyltransferase type 11 [Jannaschia sp. CCS1]
Length = 261
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+GSG GF + I S G V I+ + R + +
Sbjct: 37 EGERVLDIGSGPGF--LAAQIADQSGPDGEVVGIDISEQMVD--RATQRSEHSWLSYRCA 92
Query: 131 RIQEAPQMITTCDVISARALAD-LDTLLEYS 160
E P + DV+ + +A+ + + ++
Sbjct: 93 DATELPFEDSYFDVVVSTQVAEYVPDIAKFC 123
>gi|325291723|ref|YP_004277587.1| Sun protein [Agrobacterium sp. H13-3]
gi|325059576|gb|ADY63267.1| Sun protein [Agrobacterium sp. H13-3]
Length = 429
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D +GGG G ++ S G V+ ++ K+ + + +++ R
Sbjct: 231 EGEQILDYCAGGG--GKTLAMAASMNNKGQVHAFDADRKRLAPIIERLKRAGTRNVQVHD 288
Query: 131 RIQEAPQMITTCDVI 145
R D +
Sbjct: 289 RAAGLVPFHEKFDRV 303
>gi|268323315|emb|CBH36903.1| conserved hypothetical protein, methyltransferase domain family
[uncultured archaeon]
Length = 253
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 13/106 (12%)
Query: 58 HVEDSLRVFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
H S+ ++ +D+G+G GF ++ + + G V I+ R
Sbjct: 36 HFWKSILKTEIGTDRNLNILDVGTGTGF----LALLFAEL-GHKVTGIDISKSMLEKSRC 90
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
K + P + D++ ++ L ++ P
Sbjct: 91 NAYKQKLAVNFMHGDAENLPFDDGSFDIV-------MNRYLLWTLP 129
>gi|269837716|ref|YP_003319944.1| 50S ribosomal protein L11 methyltransferase [Sphaerobacter
thermophilus DSM 20745]
gi|269786979|gb|ACZ39122.1| ribosomal protein L11 methyltransferase [Sphaerobacter thermophilus
DSM 20745]
Length = 312
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 13/107 (12%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +D G+G G I +I + V I+ KA + +
Sbjct: 165 WLEELPVEGKTLLDAGAGSGILSIA-AIARGAAHVDAVE-IDPVAVKALRHNLDLNQVTD 222
Query: 124 RGKVFACRIQEAPQMITTCDVISA--------RALADLDTLLEYSFP 162
R +V + E + D++ A RA TL + P
Sbjct: 223 RVRVIQGDVVEVVEPSGGYDLVLANIISNVLIRA---APTLAGAARP 266
>gi|197120676|ref|YP_002132627.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp. K]
gi|220915388|ref|YP_002490692.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|196170525|gb|ACG71498.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp. K]
gi|219953242|gb|ACL63626.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 287
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G+G G +I + G V ++ + R +
Sbjct: 149 GASVLDVGTGSGL----LAIAARKLGAGRVTGNDNDPVAVAVARENAARNGVPEVALTED 204
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYS 160
P + DV+ A LA +TL+E +
Sbjct: 205 A--LPAIGGAFDVVVANILA--NTLVELA 229
>gi|332711036|ref|ZP_08430971.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
majuscula 3L]
gi|332350162|gb|EGJ29767.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
majuscula 3L]
Length = 295
Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 19/103 (18%)
Query: 51 VEDFWIRH-VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS-----IEGGLVNLI 104
+ W+R + DS+ P +DLG G G ++ + ++ L+
Sbjct: 84 PNETWVRQGLIDSI-----VGKPRRILDLGCGTGSTTLMLKQRFPDAQVIGLDLSPYMLV 138
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ K K + ++ + D+++A
Sbjct: 139 MADYK--------ANKANVDIQWLHGMAEQTGLADQSFDLVTA 173
>gi|330811121|ref|YP_004355583.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327379229|gb|AEA70579.1| Putative methyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 302
Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 9/104 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ S + + +H E L P+ +DL +G G GI + + E V L
Sbjct: 104 LIPRSPIGELIEKHFE-----PWLGQEPARILDLCTGSGCIGIACAYEFPEAE---VVLA 155
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT-CDVISA 147
+ + +++ +VF + + D+I +
Sbjct: 156 DLSFEALEVANQNIERHGVDERVFTVQGDGFDGLPGQRFDLIVS 199
>gi|255642086|gb|ACU21309.1| unknown [Glycine max]
Length = 275
Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFA 129
+ +D+G G G I SI + V I++ + A VV+ V
Sbjct: 96 GKVVVDVGCGTG----ILSIFCAQAGAKRVYAIDASD-IALQANEVVKANNLSDVIVVLH 150
Query: 130 CRIQEAPQMITTCDVISA 147
R+++ ++ DVI +
Sbjct: 151 GRVEDV-EIDEEVDVIIS 167
>gi|120554489|ref|YP_958840.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Marinobacter aquaeolei VT8]
gi|120324338|gb|ABM18653.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
[Marinobacter aquaeolei VT8]
Length = 301
Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + +DL +G G GI + E V+L + + ++
Sbjct: 120 LQPWLGATQVQRILDLCTGSGCIGIGAATVFDEAE---VDLSDVSADALAVAESNIELHG 176
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G+V A + + DVI +
Sbjct: 177 LEGRVRAIQSDVFDNIEGRYDVIVS 201
>gi|308070985|ref|YP_003872590.1| hypothetical protein PPE_04288 [Paenibacillus polymyxa E681]
gi|305860264|gb|ADM72052.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 200
Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +D+G G G G+ + + G V +++ + ++ +
Sbjct: 55 LPAQASVLDVGCGYGPIGLTAAALVPE---GHVTMVDINERAVQLAIENAERNGVKNVTI 111
Query: 129 ACRIQEAPQMITTCDVI 145
A DVI
Sbjct: 112 KQSDLFAEVKNERFDVI 128
>gi|87307525|ref|ZP_01089669.1| phosphatidylethanolamine N-methyltransferase [Blastopirellula
marina DSM 3645]
gi|87289695|gb|EAQ81585.1| phosphatidylethanolamine N-methyltransferase [Blastopirellula
marina DSM 3645]
Length = 250
Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G+G G + + + G ++ + S + + ++
Sbjct: 56 RRALDMGTGPG----TIAQIWAEL-GYETTGVDFSSTMLSAAQQAATRRGLSIELIEADA 110
Query: 133 QEAPQMITTCDVISARAL 150
+ P + D++S+RAL
Sbjct: 111 EYPPFEPESFDLVSSRAL 128
>gi|146278801|ref|YP_001168960.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
ATCC 17025]
gi|166201214|sp|A4WW91|UBIG_RHOS5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|145557042|gb|ABP71655.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
ATCC 17025]
Length = 247
Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 5/80 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L +D+G GGG + + V ++ + R +++
Sbjct: 57 APLPFQGLRLLDIGCGGGLLSEPMARLGAD-----VVGADAAPRNIPVARLHAEQSGLTI 111
Query: 126 KVFACRIQEAPQMITTCDVI 145
++ DV+
Sbjct: 112 DYRNTTAEDLAAAGERFDVV 131
>gi|317130772|ref|YP_004097054.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cellulosilyticus DSM 2522]
gi|315475720|gb|ADU32323.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cellulosilyticus DSM 2522]
Length = 290
Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 33/103 (32%), Gaps = 13/103 (12%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+F P +D+G+G G I ++ + V+ ++ R A
Sbjct: 112 SLFLNREQPIRIVDVGTGSGIIAITLAL---EVVHSHVHAVDISQAALDVARSNATALGA 168
Query: 124 RGKVFACR-IQEAPQMITTCDVISA---------RALADLDTL 156
+ ++ + D++ + RA+ + L
Sbjct: 169 KVTFHEGDLLEPFLAESSEFDIVISNPPYIPEGDRAIMKENVL 211
>gi|114773221|ref|ZP_01450456.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
HTCC2255]
gi|114546340|gb|EAU49249.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
HTCC2255]
Length = 277
Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 5/76 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + V I++ Q T
Sbjct: 84 QGLSILDVGCGGGLVSEPLARLGAE-----VTGIDASAMSIQVATQHAQNTLTPVTYVHT 138
Query: 131 RIQEAPQMITTCDVIS 146
++ DV+
Sbjct: 139 LAEDLVAQQQQFDVVI 154
>gi|3873397|gb|AAC77473.1| unknown [Rhodococcus erythropolis]
Length = 205
Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DLGS GF + + + G V + L V + C
Sbjct: 128 GSVLDLGSCFGF--LPLRLARA---GMDVTATDILPGTMILLDAVAPELGITIDTVICDA 182
Query: 133 QEAPQMITTCDVISA 147
E P + D ++A
Sbjct: 183 GEVPAPDNSADTVTA 197
>gi|172058077|ref|YP_001814537.1| O-methyltransferase family protein [Exiguobacterium sibiricum
255-15]
gi|171990598|gb|ACB61520.1| O-methyltransferase family 3 [Exiguobacterium sibiricum 255-15]
Length = 213
Score = 37.8 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L P ++LG+ G+ I + L + +E K+ + + ++++
Sbjct: 43 LSLLTLQ-QPKRILELGTAIGYSAIRMARALPDAR---ITTVERNAKRYAEAKMFIERSD 98
Query: 123 ARGK---VFACRIQEAPQMITTCDVI 145
+ VFA ++ A + D +
Sbjct: 99 VADRIDIVFADAVELAETLEQQFDAV 124
>gi|330878207|gb|EGH12356.1| hypothetical protein PSYMP_20644 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 301
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+G G G ++ ++ + V ++ K F + + +
Sbjct: 123 KRAADIGCGTGAGALLIAVARPDAQ---VYAVDINPKALHFAQANAVVAGLQNMECCHSD 179
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 180 I--LSGLTGNFDLIVA 193
>gi|307352672|ref|YP_003893723.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
gi|307155905|gb|ADN35285.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
Length = 282
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 15/105 (14%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ E L L P +D+GSG G + + + V +E
Sbjct: 46 AIKNPERV---QFI--LEKLPLSP-GLRVLDIGSGPGTIAVPVA-----GQVDHVTGVEP 94
Query: 107 KNKKASFLRYVVQKTAARG-KVFACRIQEAP---QMITTCDVISA 147
A + + + R +E + D++ A
Sbjct: 95 SPGMADVMEEYAAEKGVDNLDIIRKRWEEIDLSTDLKGPYDLVFA 139
>gi|302340141|ref|YP_003805347.1| methyltransferase small [Spirochaeta smaragdinae DSM 11293]
gi|301637326|gb|ADK82753.1| methyltransferase small [Spirochaeta smaragdinae DSM 11293]
Length = 417
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 19/93 (20%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
++ ID+G G G G+ + I L + +F + ++
Sbjct: 56 KIAEGKRSLIDIGCGAGVIGLSIKKRHPEINAT---LQDRDALAVAFSQAAARRNGL--- 109
Query: 127 VFACRIQEAPQMI------------TTCDVISA 147
+E+P + T D+I +
Sbjct: 110 -LPDGAEESPDLRFAGALAFEGQEGRTFDLIVS 141
>gi|300710969|ref|YP_003736783.1| protein-L-isoaspartate O-methyltransferase [Halalkalicoccus
jeotgali B3]
gi|299124652|gb|ADJ14991.1| protein-L-isoaspartate O-methyltransferase [Halalkalicoccus
jeotgali B3]
Length = 204
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Query: 62 SLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
SL + P P +DLG G G + + + G V + R +
Sbjct: 33 SLVIEHADPGPEETVLDLGCGTGAIALALA-----PDAGRVVGRDISEGMMERAREKAAE 87
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
F AP D++++
Sbjct: 88 RGLNNVEFGEGRFRAPNYDGPVDIVTS 114
>gi|269218655|ref|ZP_06162509.1| RNA methyltransferase, RsmD family [Actinomyces sp. oral taxon 848
str. F0332]
gi|269211766|gb|EEZ78106.1| RNA methyltransferase, RsmD family [Actinomyces sp. oral taxon 848
str. F0332]
Length = 185
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+DL SG G G+ + S V +ES K A +R + R KV
Sbjct: 43 EGRAVLDLYSGSGALGLEAA----SRGAAFVECVESSRKAAELIRANARALNLRAKVSCM 98
Query: 131 RIQEAPQMITT--CDVI 145
R++ + DV+
Sbjct: 99 RVELRLADPSQTAFDVV 115
>gi|218906506|ref|YP_002454340.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus AH820]
gi|229124832|ref|ZP_04254010.1| Protein hemK [Bacillus cereus 95/8201]
gi|218534962|gb|ACK87360.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus AH820]
gi|228658623|gb|EEL14285.1| Protein hemK [Bacillus cereus 95/8201]
Length = 283
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNL---YVYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|206978498|ref|ZP_03239357.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus H3081.97]
gi|206743288|gb|EDZ54736.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus H3081.97]
Length = 283
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I S++ ++ V++ + K A
Sbjct: 106 IDRHFND---------EKLHVADIGTGSGAISITLSLENKNLHVYTVDIAQESIKVA--- 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|78062726|ref|YP_372634.1| methylase involved in ubiquinone/menaquinone biosynthesis-like
[Burkholderia sp. 383]
gi|77970611|gb|ABB11990.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
protein [Burkholderia sp. 383]
Length = 282
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 35/112 (31%), Gaps = 17/112 (15%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+ + + D+ +D+G G G + +I I+ +
Sbjct: 34 EPLEKLLVDAAAP----SSARSVLDVGCGTG--AVTLAIARRLGADVQCTGIDISARMID 87
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA-----------RALADL 153
+ ++++ + +Q + D+I + RA A+L
Sbjct: 88 AAQARAERSSVPVRFVCADVQTHAFEPASVDLIVSRLGVMFFDDPVRAFANL 139
>gi|315048339|ref|XP_003173544.1| methyltransferase [Arthroderma gypseum CBS 118893]
gi|311341511|gb|EFR00714.1| methyltransferase [Arthroderma gypseum CBS 118893]
Length = 499
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 12/93 (12%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D V + +D+GSG G +I + G IE + L
Sbjct: 258 LTRHEFD--AVLKAVESNKEVLDIGSGHG-----VAIA---KQLGKAYAIEPNCDRNEVL 307
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++ ++ P D A
Sbjct: 308 --ASNSAKSSVEIRQGTAEKLPFEDNKFDAAVA 338
>gi|251782462|ref|YP_002996764.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391091|dbj|BAH81550.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 210
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 10/86 (11%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+DLG G G I L+ ++ L++ N+ + ++ +
Sbjct: 65 HFNKGERVLDLGCGYG----PLGISLAKVQEVEATLVDINNRAIDLAQKNARQNQVDVTI 120
Query: 128 FACRIQEAPQMITTCDVISA----RA 149
F I + + + I + RA
Sbjct: 121 FQSNI--YENVRGSFNHIISNPPIRA 144
>gi|110637918|ref|YP_678125.1| arsenite S-adenosylmethyltransferase [Cytophaga hutchinsonii ATCC
33406]
gi|110280599|gb|ABG58785.1| SAM-dependent methyltransferase [Cytophaga hutchinsonii ATCC 33406]
Length = 280
Score = 37.8 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+DLGSG G + G V I+ + +K F
Sbjct: 72 IKKGDTVVDLGSGAGNDAFVARTLTGE--EGEVIGIDMTEAMIQKAKGNTEKLGFTNVAF 129
Query: 129 A-CRIQEAPQMITTCDVISARALADL 153
I++ P DV+ + + +L
Sbjct: 130 RLGDIEDIPLSSKRADVVVSNCVMNL 155
>gi|332020901|gb|EGI61299.1| Protein arginine N-methyltransferase 6 [Acromyrmex echinatior]
Length = 349
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVF 128
+ +D+G+G G I SI + + V +E+ A+ + V + + +V
Sbjct: 39 QNKVVMDIGAGSG----ILSIFCAQVGAKKVYAVEASML-ANSIEQVSIENNMQDKVEVI 93
Query: 129 ACRIQE-APQMITTCDVISA 147
++++ +P + DVI +
Sbjct: 94 HSKVEDISPDSLEKVDVIVS 113
>gi|222098800|ref|YP_002532858.1| modification methylase, hemk family [Bacillus cereus Q1]
gi|221242859|gb|ACM15569.1| modification methylase, HemK family [Bacillus cereus Q1]
Length = 283
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I S++ ++ V++ + K A
Sbjct: 106 IDRHFND---------EKLHVADIGTGSGAISITLSLENKNLHVYTVDIAQESIKVA--- 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|167044203|gb|ABZ08884.1| putative protein-L-isoaspartate(D-aspartate) O-methyltransferase
(PCMT) [uncultured marine microorganism HF4000_APKG5H11]
Length = 246
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+++G+G G+ + + + V L+ S ++A R + + V
Sbjct: 108 ADRVLEVGAGSGYQAAVLAELVPDGNVVAVELVRSLAQRA---RDTLDDLDYKNIVVEDA 164
Query: 132 IQEAP-QMITTCDVISARALAD 152
+ D I A A
Sbjct: 165 SESLGCSWRGPYDAIVVSAAAP 186
>gi|170735747|ref|YP_001777007.1| methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
gi|169817935|gb|ACA92517.1| Methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
Length = 282
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 13/92 (14%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +D+G G G + ++ I+ + R ++ + +
Sbjct: 50 TRVLDVGCGTG--AVTLAVARRLGASAQCTGIDISARMIDAARARAERGGVPARFVCADV 107
Query: 133 QEAPQMITTCDVISA-----------RALADL 153
Q + D+I + RA A+L
Sbjct: 108 QTHAFEPASVDLIVSRLGVMFFDDPVRAFANL 139
>gi|317048991|ref|YP_004116639.1| ribosomal protein L3-specific protein-(glutamine-N5)
methyltransferase [Pantoea sp. At-9b]
gi|316950608|gb|ADU70083.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Pantoea sp. At-9b]
Length = 310
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ PS +D+ +G G I + E V+ ++ + +++ V
Sbjct: 129 IADNPSHILDMCTGSGCIAIACAYAFPEAE---VDAVDISTDALAVAEQNIEEHGLLNHV 185
Query: 128 FACRIQEAPQMIT-TCDVIS 146
R + D+I
Sbjct: 186 TPIRADLFRGLPEVKYDLIV 205
>gi|146322495|ref|XP_750368.2| histone H4 arginine methyltransferase RmtA [Aspergillus fumigatus
Af293]
gi|129557045|gb|EAL88330.2| histone H4 arginine methyltransferase RmtA [Aspergillus fumigatus
Af293]
gi|159130842|gb|EDP55955.1| histone H4 arginine methyltransferase RmtA [Aspergillus fumigatus
A1163]
Length = 352
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 48 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 103
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V + + + +++E T D+I +
Sbjct: 104 EKAREI-VAVNGLSDKITLLQGKMEEVQLPFPTVDIIIS 141
>gi|317179683|dbj|BAJ57471.1| hypothetical protein HPF30_1374 [Helicobacter pylori F30]
Length = 238
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|296133075|ref|YP_003640322.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Thermincola sp. JR]
gi|296031653|gb|ADG82421.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Thermincola potens JR]
Length = 201
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL ++ P SI D+G+G G + +I G V IE + + V K
Sbjct: 34 SLAQAKIQP-NSIIYDIGAGTGSFTVEAAICAPE---GRVYAIEKEQAGIDLISRNVDKF 89
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
++ + + DV+
Sbjct: 90 GLTNVEIIHGTAPQVLHGLPRPDVV 114
>gi|291229052|ref|XP_002734493.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 363
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+V L + +D+G G G I+ + + ++ ++ + R +K A
Sbjct: 167 KVKCLLDSGAKVVDIGCGSG---IVLNRLGPQFPKSEFHGVDFSSEAVTKARDDAEKMGA 223
Query: 124 RGKVFAC-RIQEAP-QMITTCDVISA 147
+F + P + + D + A
Sbjct: 224 TNVLFHEYDAAKLPADWLNSFDYVIA 249
>gi|170698892|ref|ZP_02889953.1| Methyltransferase type 11 [Burkholderia ambifaria IOP40-10]
gi|170136215|gb|EDT04482.1| Methyltransferase type 11 [Burkholderia ambifaria IOP40-10]
Length = 282
Score = 37.8 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 26/89 (29%), Gaps = 13/89 (14%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G G G + +I ++ + + + ++ Q
Sbjct: 53 LDVGCGTG--AVTLAIARRLGTHAHCTGVDISARMIAAAQARAERDGLGASFVDADAQTH 110
Query: 136 PQMITTCDVISA-----------RALADL 153
D+I + RA A+L
Sbjct: 111 AFAPDQFDLIVSRFGVMFFDDPVRAFANL 139
>gi|330964404|gb|EGH64664.1| hypothetical protein PSYAC_07090 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 301
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+G G G ++ ++ + V ++ K F + + +
Sbjct: 123 KRAADIGCGTGAGALLIAVARPDAQ---VYAVDINPKALHFAQANAVVAGLQNMECCHSD 179
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 180 I--LSGLTGNFDLIVA 193
>gi|262301023|gb|ACY43104.1| arg methyltransferase [Armadillidium vulgare]
Length = 243
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 12/85 (14%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ I +D+G G G I S+ + V IE ++ + + AA
Sbjct: 18 RHLFKNKIVLDVGCGTG----ILSMFAAKAGAAKVYGIE----MSNIVEQAKKIIAANNF 69
Query: 126 ---KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 70 DNIEIIHGKVEEVKLPVEKVDIIIS 94
>gi|1199500|emb|CAA64969.1| gidB [Borrelia burgdorferi]
gi|2689171|emb|CAA06006.1| glucose inhibited division protein B [Borrelia burgdorferi]
Length = 209
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 58 HVEDSL----RVFQLHPYPSIW-----IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
HV DSL V +++P W +D F GII +I +S + L+E
Sbjct: 55 HVIDSLLGLSTVKEINPSEVPWTLEVVLD------FRGIILAIFDTSRK---YYLLERSK 105
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
KK++FL+ + + E + I+ RA ++ EY+
Sbjct: 106 KKSTFLKMIKLELDLENVKILEYEIEKEKKKYEF--ITIRAFRSMN---EYAL 153
>gi|317178212|dbj|BAJ56001.1| hypothetical protein HPF16_1404 [Helicobacter pylori F16]
Length = 238
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|295098508|emb|CBK87598.1| 16S rRNA m(2)G 1207 methyltransferase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 342
Score = 37.8 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVEDS---LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D+ L + L P+ +D+G G G + + +
Sbjct: 167 LT-IKTLPGVFSRDALDTGSKLLLSTLTPHTKGKVLDVGCGAGVLSTVLASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G VFA + + D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGIEGDVFASNV--FSDVTGRFDMIIS 267
>gi|292655468|ref|YP_003535365.1| hypothetical protein HVO_1313 [Haloferax volcanii DS2]
gi|291370338|gb|ADE02565.1| conserved hypothetical protein [Haloferax volcanii DS2]
Length = 467
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 32/101 (31%), Gaps = 7/101 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L P +D+G+G G P + L + +E A L ++ +T
Sbjct: 152 LAERSLLPRKPRVLDVGAGTGGPALGLHDYLPDDSVVDYHAVEPSA-SADVLDRMLGETR 210
Query: 123 ARGK-VFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ EA D++ A L E P
Sbjct: 211 RNFRTTVHRETAEAFAPDGEYDIVL---FAS--VLSELDDP 246
>gi|224475689|ref|YP_002633295.1| putative rRNA methylase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222420296|emb|CAL27110.1| putative rRNA methylase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 201
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 8/90 (8%)
Query: 65 VFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P PS ID+G G G G++ + + V L++ ++ + +K
Sbjct: 53 LKEHPPGPSKTIIDVGCGYGPIGLMIAKVSPHHK---VILLDVNHRALDLAKENSEKNHI 109
Query: 124 RGKVFACRIQEAPQMITTCDVISA----RA 149
V A + D+I RA
Sbjct: 110 DNAVIQESDGLAEIPDDSADMIVTNPPIRA 139
>gi|170596601|ref|XP_001902826.1| hypothetical protein Bm1_56845 [Brugia malayi]
gi|158589258|gb|EDP28326.1| hypothetical protein Bm1_56845 [Brugia malayi]
Length = 907
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 16/73 (21%)
Query: 44 NLVSSST----VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
NL+S S + D +H S+ H +PS +ID G+ S+ +
Sbjct: 149 NLISISDTSLPLYDVCTKHFIHSV----FHRFPSNFID--------GLKLSLSACDTKST 196
Query: 100 LVNLIESKNKKAS 112
+ + + KK +
Sbjct: 197 PLCIFDEIAKKLN 209
>gi|145348351|ref|XP_001418614.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578844|gb|ABO96907.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 394
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D++R+ + +D+G+G G + ++ + V +E+ + R +V
Sbjct: 60 DAVRLNPDSFRGKVVLDVGTGSG----VLAMWAAQAGAKKVYAVEATHMAVQA-RKIVAA 114
Query: 121 TAAR--GKVFACRIQEAPQMITTCDVISA 147
+V ++E ++ DVI +
Sbjct: 115 NGLSDVVEVIQGSMEEV-ELPEKVDVIIS 142
>gi|226305284|ref|YP_002765242.1| hypothetical protein RER_17950 [Rhodococcus erythropolis PR4]
gi|226184399|dbj|BAH32503.1| hypothetical protein RER_17950 [Rhodococcus erythropolis PR4]
Length = 277
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DLGS GF + + + G V + L V + C
Sbjct: 128 GSVLDLGSCFGF--LPLRLARA---GMDVTATDILPGTMILLDAVAPELGITIDTVICDA 182
Query: 133 QEAPQMITTCDVISA 147
E P + D ++A
Sbjct: 183 GEVPAPDNSADTVTA 197
>gi|20089875|ref|NP_615950.1| hypothetical protein MA0999 [Methanosarcina acetivorans C2A]
gi|19914826|gb|AAM04430.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 295
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P ID G G G+ G+ L +G I+ K + + K +
Sbjct: 38 NPIKIIDFGCGSGYLGLKFLPLLP--KGSTYIGIDKGEKLIEEAKKIFSKLPYDTEFIVS 95
Query: 131 RIQEAPQMITTCDVISARAL 150
+++ DV +AL
Sbjct: 96 DVEQVQLWEMKYDVAICQAL 115
>gi|229156472|ref|ZP_04284563.1| Methyltransferase type 11 [Bacillus cereus ATCC 4342]
gi|228626975|gb|EEK83711.1| Methyltransferase type 11 [Bacillus cereus ATCC 4342]
Length = 261
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+ + +D+ +GGG + + V ++ K + + F A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFQE-----VVALDLTEKMLENAKKFIISNGHENVTFVA 95
Query: 130 CRIQEAPQMITTCDVISAR 148
++ P + DVI+ R
Sbjct: 96 GNAEDLPFSDRSFDVITCR 114
>gi|269798205|ref|YP_003312105.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella parvula DSM 2008]
gi|269094834|gb|ACZ24825.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella parvula DSM 2008]
Length = 195
Score = 37.8 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
SI +D+G+G G I ++ G V IE +K + ++K V
Sbjct: 34 IEEDSIVLDVGAGTGSISIEAALAAPK---GHVYAIERFDKGIDLINENMKKFNVNNMTV 90
Query: 128 FACRIQEAPQMITTCDVIS 146
+ E + + D +
Sbjct: 91 IKSKAPEGMEELPKLDAVI 109
>gi|328767129|gb|EGF77180.1| hypothetical protein BATDEDRAFT_14235 [Batrachochytrium
dendrobatidis JAM81]
Length = 328
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKNKKASFLRYVVQKTAAR 124
+ + I +D+G G G I S+ + V ++ + KKA + +
Sbjct: 35 KAYFKDKIVLDVGCGTG----ILSMFAAKAGAKQVIAVDNSTIIKKAKLIAAANKVDDVI 90
Query: 125 GKVF-ACRIQEAPQMITTCDVISA 147
+VF A +I+E + DVI +
Sbjct: 91 TQVFIAGKIEEIKLPVDKVDVIVS 114
>gi|302771289|ref|XP_002969063.1| hypothetical protein SELMODRAFT_90833 [Selaginella moellendorffii]
gi|300163568|gb|EFJ30179.1| hypothetical protein SELMODRAFT_90833 [Selaginella moellendorffii]
Length = 351
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D++ Q + ID+G G G I SI ++ V +++ + R VV+
Sbjct: 44 DAIFAHQEAIKDKVVIDVGCGTG----ILSIFCAAAGARKVYAVDASDIAVQA-REVVKA 98
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
V R++E Q+ DVI +
Sbjct: 99 NGFSDVITVIVGRVEEI-QLEEKADVIIS 126
>gi|302822408|ref|XP_002992862.1| hypothetical protein SELMODRAFT_236632 [Selaginella moellendorffii]
gi|300139310|gb|EFJ06053.1| hypothetical protein SELMODRAFT_236632 [Selaginella moellendorffii]
Length = 342
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D++ Q + ID+G G G I SI ++ V +++ + R VV+
Sbjct: 49 DAIFAHQEAIKDKVVIDVGCGTG----ILSIFCAAAGARKVYAVDASDIAVQA-REVVKA 103
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
V R++E Q+ DVI +
Sbjct: 104 NGFSDVITVIVGRVEEI-QLEEKADVIIS 131
>gi|158520779|ref|YP_001528649.1| arsenite S-adenosylmethyltransferase [Desulfococcus oleovorans
Hxd3]
gi|158509605|gb|ABW66572.1| Methyltransferase type 11 [Desulfococcus oleovorans Hxd3]
Length = 266
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P +DLGSGGGF + + + G V ++ + + R ++ A
Sbjct: 74 AIASLKP-GETVLDLGSGGGFDCFLAG--RAVGDSGQVIGVDMTPEMVAKARRNAEQLGA 130
Query: 124 RGKVFA-CRIQEAPQMITTCDVISA 147
F ++ P T DV+ +
Sbjct: 131 ENVEFRLGELENLPVADGTVDVVIS 155
>gi|73667975|ref|YP_303990.1| hypothetical protein Mbar_A0427 [Methanosarcina barkeri str.
Fusaro]
gi|72395137|gb|AAZ69410.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 2/80 (2%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P ID G G G+ G+ L +G I+ K + + K +
Sbjct: 38 NPIKIIDFGCGLGYLGLKFLPLLP--KGSTYIGIDKGEKLIEEAKEIFSKLPYDTEFIVS 95
Query: 131 RIQEAPQMITTCDVISARAL 150
+++ DV +AL
Sbjct: 96 DVEQVQLWEMKYDVAICQAL 115
>gi|307110474|gb|EFN58710.1| hypothetical protein CHLNCDRAFT_140353 [Chlorella variabilis]
Length = 325
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D+L+ QL +D+G G GF + + I + LI+ ++ + R
Sbjct: 82 DALQPAQLDSADLKVVDVGGGTGF--CTQGVVKAGIPPANITLIDQSPQQLAKARAKADL 139
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
+ ++ P T D +
Sbjct: 140 KG--ATILEGDAEDLPFETDTFDRYVS 164
>gi|229542477|ref|ZP_04431537.1| modification methylase, HemK family [Bacillus coagulans 36D1]
gi|229326897|gb|EEN92572.1| modification methylase, HemK family [Bacillus coagulans 36D1]
Length = 287
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D+G+G G ++L + LV + K + + A + +
Sbjct: 121 KLADIGTGSGIIATTIKLELPEL---LVYASDISEKALAVAEKNAEALHADIRFVHGDLL 177
Query: 134 EAPQMITTCDVISA 147
+ D++ +
Sbjct: 178 QPFIHGEKLDIVLS 191
>gi|188581630|ref|YP_001925075.1| methyltransferase small [Methylobacterium populi BJ001]
gi|179345128|gb|ACB80540.1| methyltransferase small [Methylobacterium populi BJ001]
Length = 341
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P P +D+G G G GI+ + +L E V L++ R + V
Sbjct: 157 PAPRRVVDIGCGSGATGILVAKRLPEAE---VVLVDINPAALRAARINARLAGVPN-VHP 212
Query: 130 CRIQEAPQMITTCDVISA 147
+ D+I +
Sbjct: 213 VHSDMLQGVEGAFDLIVS 230
>gi|148359499|ref|YP_001250706.1| methoxymalonyl CoA synthase [Legionella pneumophila str. Corby]
gi|148281272|gb|ABQ55360.1| methoxymalonyl CoA synthase [Legionella pneumophila str. Corby]
Length = 630
Score = 37.8 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L+ Y +D+G G G + ++ + NL ES K +
Sbjct: 450 LACLDLNQY-RSILDVGGGDGTIACALAQAYPHLKITVYNLPESA--KIAQKNIDAMGLQ 506
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
R VFA Q D+I
Sbjct: 507 KRISVFAGDFINDEQFPAGFDLI 529
>gi|242237730|ref|YP_002985911.1| methyltransferase type 11 [Dickeya dadantii Ech703]
gi|242129787|gb|ACS84089.1| Methyltransferase type 11 [Dickeya dadantii Ech703]
Length = 258
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G GF + ++ G V ++ R +
Sbjct: 58 RVLDIGTGPGFFAVTLALA-----GHRVTAVDVTQAMLDQARANAAHYRTTIDFVHSDVH 112
Query: 134 EAPQMITTCDVISAR 148
P D++ +R
Sbjct: 113 ALPFADNGFDLVVSR 127
>gi|261350436|ref|ZP_05975853.1| methyltransferase domain protein [Methanobrevibacter smithii DSM
2374]
gi|288861219|gb|EFC93517.1| methyltransferase domain protein [Methanobrevibacter smithii DSM
2374]
Length = 272
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L + +DLG G G + + + V ++S K L Q+
Sbjct: 49 DLLFSKLILNENDSLLDLGCGEGSITLPIA-----KQVRKVTGVDSSTKMLELLNQRAQE 103
Query: 121 TAARGK-VFACRIQE-APQMITTCDVISA 147
+ +++ + + I DV+ A
Sbjct: 104 QNIKNVDTILKSLEDISYEEIGDYDVVLA 132
>gi|257076758|ref|ZP_05571119.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Ferroplasma acidarmanus fer1]
Length = 396
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 15/111 (13%)
Query: 35 LFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
L K + N+ + + S+ L+ ++W D+GSG G I S+
Sbjct: 218 LLRKNN---NIT-KKEIREI-------SISELDLNNGDTMW-DVGSGSGSVAIYASLINP 265
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G + IE +F+ ++K + + EA I + +
Sbjct: 266 D---GNIFAIEKDKALCNFIDENMRKFSTDINIINGEAPEALDGIPDPEAV 313
>gi|322411856|gb|EFY02764.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 210
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+DLG G G I L+ ++ L++ N+ + ++ +F
Sbjct: 66 FNKGERILDLGCGYG----PLGISLAKVQDVEATLVDINNRAIDLAKKNARQNQVNVTIF 121
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I + + + I + RA
Sbjct: 122 QSNI--YENVRGSFNHIISNPPIRA 144
>gi|229020547|ref|ZP_04177292.1| Protein hemK [Bacillus cereus AH1273]
gi|229026768|ref|ZP_04183100.1| Protein hemK [Bacillus cereus AH1272]
gi|228734491|gb|EEL85153.1| Protein hemK [Bacillus cereus AH1272]
gi|228740767|gb|EEL91020.1| Protein hemK [Bacillus cereus AH1273]
Length = 283
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEELHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|226493498|ref|NP_001141741.1| hypothetical protein LOC100273874 [Zea mays]
gi|194705760|gb|ACF86964.1| unknown [Zea mays]
Length = 214
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-------QKTAAR 124
++LGSG G G++ + +S V + + + A +++ + +T +
Sbjct: 35 SKKVLELGSGYGLAGLVIA---ASTNADEVVISDGNPQVAEYIQKNISINAETFGETKVK 91
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ ++A +M+ T D+I A
Sbjct: 92 SLILHWDKEQASEMLNTFDIIVA 114
>gi|121702523|ref|XP_001269526.1| protein arginine n-methyltransferase 1, [Aspergillus clavatus NRRL
1]
gi|119397669|gb|EAW08100.1| protein arginine n-methyltransferase 1 [Aspergillus clavatus NRRL
1]
Length = 352
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 48 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 103
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V + + + +++E D+I +
Sbjct: 104 EKAREI-VAVNGLSDKVTLLQGKMEEVVLPYPEVDIIIS 141
>gi|116252881|ref|YP_768719.1| methyltransferase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257529|emb|CAK08626.1| putative methyltransferase [Rhizobium leguminosarum bv. viciae
3841]
Length = 260
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 5/86 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ + P +D+G G G + V ++ + R + A
Sbjct: 31 KLLPIAPRSEHLLDIGCGPGKISRALAGAF-----TSVTAVDPSEHMIALGRSLPGGNAG 85
Query: 124 RGKVFACRIQEAPQMITTCDVISARA 149
+ ++ P D+ A A
Sbjct: 86 NIRWIESFAEDFPANGGPFDLTVAAA 111
>gi|28872664|ref|NP_795283.1| hypothetical protein PSPTO_5559 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855920|gb|AAO58978.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 324
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+G G G ++ ++ + V ++ K F + + +
Sbjct: 146 KRAADIGCGTGAGALLIAVARPDAQ---VYAVDINPKALHFAQANAVVAGLQNMECCHSD 202
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 203 I--LSGLTGNFDLIVA 216
>gi|56962279|ref|YP_174004.1| S-adenosylmethionine (SAM)-dependent methyltransferase [Bacillus
clausii KSM-K16]
gi|56908516|dbj|BAD63043.1| S-adenosylmethionine (SAM)-dependent methyltransferase [Bacillus
clausii KSM-K16]
Length = 252
Score = 37.8 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 7/89 (7%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D L+ + D+ G G G+ + + ++ + + +
Sbjct: 27 IDQLKTLLGEVHDKAICDVACGSGHLGLALA-------PHSLTSVDPSESMLANVEKLAA 79
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISAR 148
K +E P D++ R
Sbjct: 80 TKGKSVKTVCAYAEELPFDSEQFDIVVTR 108
>gi|148643508|ref|YP_001274021.1| SAM-dependent methyltransferase [Methanobrevibacter smithii ATCC
35061]
gi|148552525|gb|ABQ87653.1| SAM-dependent methyltransferase [Methanobrevibacter smithii ATCC
35061]
Length = 272
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L + +DLG G G + + + V ++S K L Q+
Sbjct: 49 DLLFSKLILNENDSLLDLGCGEGSITLPIA-----KQVRKVTGVDSSTKMLELLNQRAQE 103
Query: 121 TAARGK-VFACRIQE-APQMITTCDVISA 147
+ +++ + + I DV+ A
Sbjct: 104 QNIKNVDTILKSLEDISYEEIGDYDVVLA 132
>gi|295135419|ref|YP_003586095.1| modification methylase HemK [Zunongwangia profunda SM-A87]
gi|294983434|gb|ADF53899.1| modification methylase HemK [Zunongwangia profunda SM-A87]
Length = 283
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D + + Q +D+G+G G I L + +++ E K A+
Sbjct: 105 ILDEVSLKQ--QQDLHILDIGTGSGCIPISLKKHLPKAQISAIDISEEALKVANL---NT 159
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+K + I ++ DVI +
Sbjct: 160 EKNKVSVHLVHQDILSTQKLSRQFDVIVS 188
>gi|255068177|ref|ZP_05320032.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC
29256]
gi|255047604|gb|EET43068.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC
29256]
Length = 372
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D + L+P+ D+G+G G + + L+ + ++ K + +
Sbjct: 181 LDLIAQAPLNPHIQTAFDIGTGSG----VIAAILAKRGISEIIATDTNPKAIACATANLA 236
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ +V + P+ D+I
Sbjct: 237 RLGLDKQVVVQAVDLFPE--GRADLIVC 262
>gi|237739618|ref|ZP_04570099.1| methyltransferase [Fusobacterium sp. 2_1_31]
gi|229423226|gb|EEO38273.1| methyltransferase [Fusobacterium sp. 2_1_31]
Length = 514
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 28/89 (31%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
LR+ + +++G G I +I+ V ++ + ++
Sbjct: 37 LRLLDFISPDLKNAKVLEIGCSFGGNIIPFAIENPD---ATVVGVDLSKVQVDEGNKIID 93
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISA 147
+ +++ I + + D I
Sbjct: 94 FLGLKNIRIYHKNILDYNEHFEQFDYIIC 122
>gi|207110723|ref|ZP_03244885.1| glucose-inhibited division protein B [Helicobacter pylori
HPKX_438_CA4C1]
Length = 48
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
L+ + + L+W++ NL + + + + D+L+ +
Sbjct: 5 LQDYARILLEWNQTHNLSGARNLSEL-EPQITDALKPLEFIKD 46
>gi|4731342|gb|AAD28459.1|AF127374_14 MitM [Streptomyces lavendulae]
Length = 283
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFA 129
S +DLG G G PG+ + + G V I +++ + ++ R +
Sbjct: 72 GSRVLDLGCGVGTPGVRIA----RLSGAHVTGISVSHEQVVRANALAEEAGLADRARFQR 127
Query: 130 CRIQEAPQMITTCDVISA 147
+ P + D + A
Sbjct: 128 ADAMDLPFEDESFDAVIA 145
>gi|110633855|ref|YP_674063.1| methyltransferase type 11 [Mesorhizobium sp. BNC1]
gi|110284839|gb|ABG62898.1| Methyltransferase type 11 [Chelativorans sp. BNC1]
Length = 360
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D G G G + + +L E F +K F R
Sbjct: 182 VLDAGCGRGLALMEMARYFPQSRFTGYDLGE---DAIEFATDAARKAGLTNVKFEARDLT 238
Query: 135 APQMITTCDVISA 147
D+I++
Sbjct: 239 GYDEKARFDLITS 251
>gi|34763569|ref|ZP_00144504.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27886758|gb|EAA23896.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 370
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ V I+ K
Sbjct: 174 CIQLMREVEEPN-ILDIGSGSGAISIAIA---NELKSSSVTGIDINEKAIELANENKTLN 229
Query: 122 AARGKVF-ACRIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 230 KIENVNFIKSDLFEKIDKDFKYDLIVS 256
>gi|332674277|gb|AEE71094.1| methyltransferase [Helicobacter pylori 83]
Length = 238
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|323939813|gb|EGB36015.1| methyltransferase small domain-containing protein [Escherichia coli
E482]
Length = 343
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+GSG G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGSGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|124486263|ref|YP_001030879.1| hypothetical protein Mlab_1447 [Methanocorpusculum labreanum Z]
gi|124363804|gb|ABN07612.1| Methyltransferase type 12 [Methanocorpusculum labreanum Z]
Length = 280
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 15/100 (15%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS+ + S +D+G+G G + + G V ++E + +
Sbjct: 61 LDSMNILP----GSSVLDVGAGPGTLSVPLA-----ASGCSVTVVEPSSPMIRGMEAYRS 111
Query: 120 KTAA-RGKVFACRIQEA-PQMITTCDVISARALADLDTLL 157
T A + +EA P I DV+ A L ++
Sbjct: 112 LTNAPPIRTIQKTWEEASPDEIGKHDVVI----ASLSLMM 147
>gi|75762681|ref|ZP_00742520.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228903803|ref|ZP_04067919.1| Protein hemK [Bacillus thuringiensis IBL 4222]
gi|228942475|ref|ZP_04105012.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228975407|ref|ZP_04135963.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228982044|ref|ZP_04142337.1| Protein hemK [Bacillus thuringiensis Bt407]
gi|74489827|gb|EAO53204.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228777708|gb|EEM25982.1| Protein hemK [Bacillus thuringiensis Bt407]
gi|228784389|gb|EEM32412.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228817217|gb|EEM63305.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228855830|gb|EEN00374.1| Protein hemK [Bacillus thuringiensis IBL 4222]
gi|326943126|gb|AEA19022.1| modification methylase, HemK family [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 283
Score = 37.8 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------KELHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFDKTGQKLDVVVS 187
>gi|307825644|ref|ZP_07655861.1| Methyltransferase type 11 [Methylobacter tundripaludum SV96]
gi|307733221|gb|EFO04081.1| Methyltransferase type 11 [Methylobacter tundripaludum SV96]
Length = 260
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 32/103 (31%), Gaps = 13/103 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P DL G G G+ + + ++ + ++ + + +
Sbjct: 34 LLPRVDSVCDLACGAGHSGLGFAGI-----ASRIVAVDPAPNMLAQVQRLAAERDVAVET 88
Query: 128 FACRIQEAPQMITTCDVISAR-A---LADLDT----LLEYSFP 162
+ P + D++ R A +DL + + P
Sbjct: 89 VEAFAESIPLASASFDLVVCRLAAHHFSDLPKAMTEMTRLAKP 131
>gi|258625579|ref|ZP_05720465.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
VM603]
gi|258582132|gb|EEW06995.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
VM603]
Length = 340
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 9/105 (8%)
Query: 45 LVSSSTVEDFWIRHVED--SLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
L ++ + D S + P ID+G G G G + + +IE +
Sbjct: 172 LT-IRSLPGVFSHGEFDLGSRLLLDTLPTLSGKVIDIGCGAGVLGCVMAKLNPNIE---L 227
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ + + + RG V+ + D +
Sbjct: 228 EMTDISALAIRSSQETLLANHLRGTVYPSDM--FSDTKHKYDYVV 270
>gi|229133782|ref|ZP_04262608.1| Methyltransferase type 11 [Bacillus cereus BDRD-ST196]
gi|228649817|gb|EEL05826.1| Methyltransferase type 11 [Bacillus cereus BDRD-ST196]
Length = 264
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+ + +D+ +GGG + + V ++ K + ++ F A
Sbjct: 44 HNTRLLDIATGGGHVANLLAPMFKE-----VVALDLTEKMLEKAKGFIEGNGHENVSFVA 98
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D I+ R
Sbjct: 99 GHAERLPFADESFDTITCR 117
>gi|222444994|ref|ZP_03607509.1| hypothetical protein METSMIALI_00610 [Methanobrevibacter smithii
DSM 2375]
gi|222434559|gb|EEE41724.1| hypothetical protein METSMIALI_00610 [Methanobrevibacter smithii
DSM 2375]
Length = 272
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L + +DLG G G + + + V ++S K L Q+
Sbjct: 49 DLLFSKLILNENDSLLDLGCGEGSITLPIA-----KQVRKVTGVDSSTKMLELLNQRAQE 103
Query: 121 TAARGK-VFACRIQE-APQMITTCDVISA 147
+ +++ + + I DV+ A
Sbjct: 104 QNIKNVDTILKSLEDISYEEIGDYDVVLA 132
>gi|188501470|gb|ACD54602.1| modification methylase HemK family-like protein [Adineta vaga]
Length = 322
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G G G I+ + + E V++ ++ + S + A V A
Sbjct: 141 PAVRRVVDIGCGAGPGAIMLAKTYPNAEILGVDINDTALRLTS-----INARLANVNVVA 195
Query: 130 CRIQEAPQMITTCDVISA 147
C + D+I +
Sbjct: 196 CHSDLLKDVQGDFDMIIS 213
>gi|2073517|emb|CAA72463.1| hypothetical protein [Rickettsia prowazekii]
Length = 216
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
S ++LG G I ++ + V+L SK + V+ + +
Sbjct: 71 ENSKILELGCAAGGNLIPHAVLYPNAHFVGVDL--SKVQ-IDEANKNVRALGLKNIEFHH 127
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 128 CSITDIDDSFGKFDYIIC 145
>gi|327193406|gb|EGE60306.1| 3-demethylubiquinone-9 3-methyltransferase protein [Rhizobium etli
CNPAF512]
Length = 248
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + K + + A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GASVVGADPSEKNIGIASTHAKASGVPVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+E + T D++
Sbjct: 119 TAEELAEAGETFDIV 133
>gi|229018208|ref|ZP_04175081.1| Methyltransferase type 11 [Bacillus cereus AH1273]
gi|228743133|gb|EEL93260.1| Methyltransferase type 11 [Bacillus cereus AH1273]
Length = 261
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+ + +D+ +GGG + + V ++ K + ++ F A
Sbjct: 41 HNNRLLDIATGGGHVANLLAPMFKE-----VVALDLTEKMLEKAKGFIEGNGHENVSFVA 95
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D I+ R
Sbjct: 96 GHAERLPFAEESFDTITCR 114
>gi|194692720|gb|ACF80444.1| unknown [Zea mays]
Length = 342
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-------QKTAAR 124
++LGSG G G++ + +S V + + + A +++ + +T +
Sbjct: 163 SKKVLELGSGYGLAGLVIA---ASTNADEVVISDGNPQVAEYIQKNISINAETFGETKVK 219
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ ++A +M+ T D+I A
Sbjct: 220 SLILHWDKEQASEMLNTFDIIVA 242
>gi|126695526|ref|YP_001090412.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. MIT 9301]
gi|126542569|gb|ABO16811.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. MIT 9301]
Length = 232
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 28/140 (20%)
Query: 36 FLKWSKKINLVSSSTVEDFWIR-----H---VEDSLRVFQLHPY--PSIWIDLGSGGGFP 85
F +W+K S S + + H V+D + + +P + D G G G
Sbjct: 21 FERWNKIY---SKSDEINTVQKNIRKGHQKTVDDVVSYIKNYPELTKKSYCDAGCGVGSL 77
Query: 86 GIIT-SIQLSSIEGGLV--NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC 142
I + + ++ + +I+ K+ + + + + ++
Sbjct: 78 SIPLLRLGIKELQVSDISSEMIKETKKRIN-------ELGLNQGKIKYEVCDLEKLKGLF 130
Query: 143 DVISARALADLDTLLEYSFP 162
DV+ LD + Y P
Sbjct: 131 DVVVC-----LDVFIHYPQP 145
>gi|254252367|ref|ZP_04945685.1| Precorrin-6B methylase 2 [Burkholderia dolosa AUO158]
gi|124894976|gb|EAY68856.1| Precorrin-6B methylase 2 [Burkholderia dolosa AUO158]
Length = 364
Score = 37.8 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S IE+ ++ F+ +
Sbjct: 188 LTLARLAPAPGELLWDVGAGSGSIGIEWMRAHPSCRAIA---IEADPERQCFIEHNRDAL 244
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 245 GVPGLQLVAGRAPDALTGLAAPDAI 269
>gi|229024393|ref|ZP_04180845.1| Methyltransferase type 11 [Bacillus cereus AH1272]
gi|228736911|gb|EEL87454.1| Methyltransferase type 11 [Bacillus cereus AH1272]
Length = 128
Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+ + +D+ +GGG + + V ++ K + ++ F A
Sbjct: 41 HNNRLLDIATGGGHVANLLAPMFKE-----VVALDLTEKMLEKAKGFIEGNGHENVSFVA 95
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D I+ R
Sbjct: 96 GHAERLPFAEESFDTITCR 114
>gi|307610649|emb|CBX00237.1| hypothetical protein LPW_19821 [Legionella pneumophila 130b]
Length = 630
Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L+ Y +D+G G G + ++ + NL ES K +
Sbjct: 450 LACLDLNQY-RSILDVGGGDGAIACALAKAYPHLKITVYNLPESA--KIAQKNIDAMGLQ 506
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
R VFA Q T D+I
Sbjct: 507 KRISVFAGDFINEEQFPTGFDLI 529
>gi|134100355|ref|YP_001106016.1| putative SAM-dependent methyltransferase [Saccharopolyspora
erythraea NRRL 2338]
gi|291007674|ref|ZP_06565647.1| putative SAM-dependent methyltransferase [Saccharopolyspora
erythraea NRRL 2338]
gi|133912978|emb|CAM03091.1| putative SAM-dependent methyltransferase [Saccharopolyspora
erythraea NRRL 2338]
Length = 238
Score = 37.8 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 11/100 (11%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
++ E R V D L V +D+GSG G+ + + G V +E
Sbjct: 19 PTSEEKL--RLVADYLEVSP----GDRVLDVGSGRGWWNVELA-----ARGADVTGLEIN 67
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
A+ ++ A + E DV++
Sbjct: 68 EDFAAAAVQRAEQAGAAVRTVVGPAAEFEPEAGAYDVVTC 107
>gi|302541520|ref|ZP_07293862.1| probable methyltransferase [Streptomyces hygroscopicus ATCC 53653]
gi|302459138|gb|EFL22231.1| probable methyltransferase [Streptomyces himastatinicus ATCC 53653]
Length = 351
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+GSG G + + E V+ + ++A R + G+V
Sbjct: 108 RRVLDVGSGPGVLTCLLARAFPEAEVVAVDGTPALLERA---RERAARLGLDGRVTTVHA 164
Query: 133 Q----EAPQMITTCDVISA 147
+ P +I T D++ +
Sbjct: 165 ELPEGLDPAVIGTADLVWS 183
>gi|229490554|ref|ZP_04384392.1| methyltransferase domain protein [Rhodococcus erythropolis SK121]
gi|229322374|gb|EEN88157.1| methyltransferase domain protein [Rhodococcus erythropolis SK121]
Length = 277
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DLGS GF + + + G V + L V + C
Sbjct: 128 GSVLDLGSCFGF--LPLRLARA---GMDVTATDILPGTMILLDAVAPELGITIDTVICDA 182
Query: 133 QEAPQMITTCDVISA 147
E P + D ++A
Sbjct: 183 GEVPAPDNSADTVTA 197
>gi|7688721|gb|AAF67508.1|AF170880_15 NovO [Streptomyces caeruleus]
Length = 230
Score = 37.8 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 21/118 (17%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D L V +DL G G +I S + S+ V+L E +R
Sbjct: 28 FVD-LLVGAGIADGQTVVDLCCGSGELEVILSSRFPSLNLVGVDLSEDM------VRIAR 80
Query: 119 QKTAARGKVFACRIQEA------PQMITTCDVISAR-AL-------ADLDTLLEYSFP 162
+ A +GK R +A + D++ +R A A DT+L + P
Sbjct: 81 EYAAEQGKALEFRHGDAQLLAGMEDLAGKADLVVSRNAFHRLTRLPAAFDTMLRLAKP 138
>gi|330508056|ref|YP_004384484.1| phosphatidylethanolamine N-methyltransferase [Methanosaeta concilii
GP-6]
gi|328928864|gb|AEB68666.1| phosphatidylethanolamine N-methyltransferase, putative
[Methanosaeta concilii GP-6]
Length = 256
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 12/90 (13%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G+G GF +I + G V ++ + R Q +
Sbjct: 47 KRVLDVGTGPGFMALILAEM-----GLDVTGVDISSGMIEKARQNAQSMGLQVDFRHADG 101
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFP 162
++ + D++ R L ++ P
Sbjct: 102 EQLSFDSESFDLLVNR-------HLLWTLP 124
>gi|319901687|ref|YP_004161415.1| Methyltransferase type 11 [Bacteroides helcogenes P 36-108]
gi|319416718|gb|ADV43829.1| Methyltransferase type 11 [Bacteroides helcogenes P 36-108]
Length = 212
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF-LRYVVQKTAARGKVFAC 130
+D+G GGG + L G V I+ + +F + ++ R +
Sbjct: 51 DGNVLDIGCGGG---ANLACMLQKCPHGKVYGIDISEESVTFACKRNRKQMNTRCFIRQG 107
Query: 131 RIQEAPQMITTCDVISA 147
+ E P D ++A
Sbjct: 108 DVTELPYNDGQFDAVTA 124
>gi|237715307|ref|ZP_04545788.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262405148|ref|ZP_06081698.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides sp. 2_1_22]
gi|294643552|ref|ZP_06721358.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides ovatus SD CC 2a]
gi|294807059|ref|ZP_06765878.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides xylanisolvens SD CC 1b]
gi|229444616|gb|EEO50407.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262356023|gb|EEZ05113.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides sp. 2_1_22]
gi|292641127|gb|EFF59339.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides ovatus SD CC 2a]
gi|294445758|gb|EFG14406.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides xylanisolvens SD CC 1b]
Length = 278
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +P +D+G+G G I +L E V + + + R AR
Sbjct: 103 IVEENPNARRLLDIGTGSGCIAISLDKKLPDAE---VEAWDISEEALAIARKNNDALEAR 159
Query: 125 GKVFACRI-QEAPQMITTCDVISA 147
+ + + + I + DVI +
Sbjct: 160 VRFLQRDVLADDWEKIPSFDVIVS 183
>gi|115760465|ref|XP_796763.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
gi|115965803|ref|XP_001182312.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 862
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Query: 60 EDSL--RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+S+ V Q+ S +D SGGG GI + L ++ E K+A L V
Sbjct: 649 LESIVTAVQQIAQPGSRILDFCSGGGHLGIALAYCLPDCHVIMIENKEESLKRA--LGRV 706
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
Q + + D+ +
Sbjct: 707 -QTLGLQNVTLY--LSNIDYFYGQFDIGVS 733
>gi|331266183|ref|YP_004325813.1| 16S RNA G1207 methylase RsmC [Streptococcus oralis Uo5]
gi|326682855|emb|CBZ00472.1| 16S RNA G1207 methylase RsmC [Streptococcus oralis Uo5]
Length = 196
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ R ++ +F
Sbjct: 55 VNEGETVLDVGCGYG----PLGLSLAKAYGAQATMVDINNRALDLARQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 111 QSNI--YEQVEGKFDHVISNPPIRA 133
>gi|296113366|ref|YP_003627304.1| protein methyltransferase HemK [Moraxella catarrhalis RH4]
gi|295921060|gb|ADG61411.1| protein methyltransferase HemK [Moraxella catarrhalis RH4]
gi|326559851|gb|EGE10251.1| protein methyltransferase HemK [Moraxella catarrhalis 7169]
gi|326560801|gb|EGE11168.1| protein methyltransferase HemK [Moraxella catarrhalis 103P14B1]
gi|326563538|gb|EGE13797.1| protein methyltransferase HemK [Moraxella catarrhalis 12P80B1]
gi|326569661|gb|EGE19713.1| protein methyltransferase HemK [Moraxella catarrhalis BC1]
gi|326570144|gb|EGE20189.1| protein methyltransferase HemK [Moraxella catarrhalis BC8]
gi|326570883|gb|EGE20907.1| protein methyltransferase HemK [Moraxella catarrhalis BC7]
gi|326574432|gb|EGE24374.1| protein methyltransferase HemK [Moraxella catarrhalis 101P30B1]
gi|326575975|gb|EGE25898.1| protein methyltransferase HemK [Moraxella catarrhalis CO72]
Length = 295
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG+G G GI ++ +E V L++ ++ + AR ++
Sbjct: 133 ILDLGTGTGCIGITLAL---ELEFAQVVLVDISSEALKVAEQNNHRLNARCQLLQSHW-- 187
Query: 135 APQMITTCDVISA 147
++ D+I +
Sbjct: 188 LQKVSGQFDIIVS 200
>gi|260772337|ref|ZP_05881253.1| hypothetical adenine-specific methylase yfcB [Vibrio metschnikovii
CIP 69.14]
gi|260611476|gb|EEX36679.1| hypothetical adenine-specific methylase yfcB [Vibrio metschnikovii
CIP 69.14]
Length = 234
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ +Q +
Sbjct: 52 WLLDEPTRIMDLCTGSGCIAIACAYAFPEAE---VDAIDISADALQVAEQNIQDHGLEQQ 108
Query: 127 VFACRIQEAPQM-ITTCDVIS 146
VF R + D+I
Sbjct: 109 VFPIRSDLFRDLPKEQYDIIV 129
>gi|229187554|ref|ZP_04314694.1| Protein hemK [Bacillus cereus BGSC 6E1]
gi|228595921|gb|EEK53601.1| Protein hemK [Bacillus cereus BGSC 6E1]
Length = 283
Score = 37.8 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLLPFYETGQKLDVVVS 187
>gi|240276873|gb|EER40384.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 391
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G S + V+L S +R T
Sbjct: 90 LHLAPIGSSPQNILDIGAGTGIWCCQMGDDYPSAQILGVDL--------SAIRNTKHVTP 141
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR----ALADLDTLLEYSFPWLYQ 166
+ I+ I + D I R A+ D L+E F L
Sbjct: 142 ENVRFEIDDIESDWTFIDSFDYIHCRYMYAAIRDWPKLVERCFNHLTP 189
>gi|229014498|ref|ZP_04171616.1| Protein hemK [Bacillus mycoides DSM 2048]
gi|228746848|gb|EEL96733.1| Protein hemK [Bacillus mycoides DSM 2048]
Length = 283
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEELHIADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGADVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|225554755|gb|EEH03050.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 380
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G S + V+L S +R T
Sbjct: 79 LHLAPIGSSPQNILDIGAGTGIWCCQMGDDYPSAQILGVDL--------SAIRNTKHVTP 130
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR----ALADLDTLLEYSFPWLYQ 166
+ I+ I + D I R A+ D L+E F L
Sbjct: 131 ENVRFEIDDIESDWTFIDSFDYIHCRYMYAAIRDWPKLVERCFNHLTP 178
>gi|189501489|ref|YP_001957206.1| HemK family modification methylase [Candidatus Amoebophilus
asiaticus 5a2]
gi|189496930|gb|ACE05477.1| modification methylase, HemK family [Candidatus Amoebophilus
asiaticus 5a2]
Length = 285
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G+G G I + LS + +++ E K A R Q+
Sbjct: 106 LIIKENSKPGLHILDIGTGSGCIAITLAKDLSDAQVDGLDISEPALKVA---RSNAQRLQ 162
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A I + P D+I +
Sbjct: 163 ANVNWIQANILQDPLPGRKWDIIVS 187
>gi|46201570|ref|ZP_00054798.2| COG0500: SAM-dependent methyltransferases [Magnetospirillum
magnetotacticum MS-1]
Length = 218
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+ +DLGSG GF + E G V ++ ++ + R K F
Sbjct: 33 GEVVVDLGSGAGFDAFLA--VRQVGESGRVIGVDMTHEMLAKARANAAKLGLANVEFRLG 90
Query: 131 RIQEAPQMITTCDVISA 147
I+ P T DV+ +
Sbjct: 91 EIEHLPIADNTADVVIS 107
>gi|326559213|gb|EGE09644.1| protein methyltransferase HemK [Moraxella catarrhalis 46P47B1]
gi|326576387|gb|EGE26296.1| protein methyltransferase HemK [Moraxella catarrhalis O35E]
Length = 295
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG+G G GI ++ +E V L++ ++ + AR ++
Sbjct: 133 ILDLGTGTGCIGITLAL---ELEFAQVVLVDISSEALKVAEQNNHRLNARCQLLQSHW-- 187
Query: 135 APQMITTCDVISA 147
++ D+I +
Sbjct: 188 LQKVSGQFDIIVS 200
>gi|289209006|ref|YP_003461072.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Thioalkalivibrio sp. K90mix]
gi|288944637|gb|ADC72336.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Thioalkalivibrio sp. K90mix]
Length = 306
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DL +GGG GI T++ L + L ++ E A+ R +V +
Sbjct: 140 ERVLDLCTGGGCIGIATALALPQAQVDLSDVSEPALAVAA-RNIERHDVGDRVQVRHSDV 198
Query: 133 QEAPQMITTCDVISA 147
+A D+I +
Sbjct: 199 LDALGPEDRYDLIVS 213
>gi|157136843|ref|XP_001656935.1| protein arginine n-methyltransferase [Aedes aegypti]
gi|108880964|gb|EAT45189.1| protein arginine n-methyltransferase [Aedes aegypti]
Length = 354
Score = 37.8 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVFA 129
+D+G+G G I SI + V IE+ N A R VV++ +VF
Sbjct: 49 DKTVLDVGTGTG----ILSIFCAQAGVKKVYAIEASNL-ARLAREVVRENGFEQVIEVFE 103
Query: 130 CRIQEA--PQMITTCDVISA 147
C++++ P D+I +
Sbjct: 104 CKVEDFQLPSGADKVDIIVS 123
>gi|330954911|gb|EGH55171.1| biotin biosynthesis protein BioC [Pseudomonas syringae Cit 7]
Length = 269
Score = 37.8 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLGSG G+ + + EG +++ E LR+ +
Sbjct: 45 LTCLPAQCNPSRWLDLGSGTGYFSRALAQAFNGSEGIALDIAEGM------LRHA-RPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P TC +I + L ++ +
Sbjct: 98 GAQHFVAGDAEHLPLRDQTCGLI----FSSLAV--QWCADF 132
>gi|224457984|ref|ZP_03666457.1| hypothetical protein FtultM_10426 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282160099|gb|ADA79490.1| hypothetical protein NE061598_10370 [Francisella tularensis subsp.
tularensis NE061598]
Length = 214
Score = 37.8 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 16/101 (15%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + RH+ DS F +D+G G G ++ + +
Sbjct: 3 DHNETYGRHILDS---FSKFRGFKNVLDIGCGAGSDLLVVKKCNNKANLTGI-------- 51
Query: 110 KASFLRYVVQKTAARG-KVFACRIQEAPQMITT--CDVISA 147
F + +K + + I++ + D+I A
Sbjct: 52 --DFGNWNQEKLSKNNINLINLDIEKDKLPFESNHFDLIIA 90
>gi|254368403|ref|ZP_04984420.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|157121297|gb|EDO65498.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
Length = 248
Score = 37.8 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 16/101 (15%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + RH+ DS F +D+G G G ++ + +
Sbjct: 33 DHNETYGRHILDS---FSKFRGFKNVLDIGCGAGSDLLVVKKCNNKANLTGI-------- 81
Query: 110 KASFLRYVVQKTAARG-KVFACRIQEAPQMITT--CDVISA 147
F + +K + + I++ + D+I A
Sbjct: 82 --DFGNWNQEKLSKNNINLINLDIEKDKLPFESNHFDLIIA 120
>gi|134302783|ref|YP_001122751.1| hypothetical protein FTW_2004 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050560|gb|ABO47631.1| hypothetical protein FTW_2004 [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 264
Score = 37.8 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 16/101 (15%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + RH+ DS F +D+G G G ++ + +
Sbjct: 33 DHNETYGRHILDS---FSKFRGFKNVLDIGCGAGSDLLVVKKCNNKANLTGI-------- 81
Query: 110 KASFLRYVVQKTAARG-KVFACRIQEAPQMITT--CDVISA 147
F + +K + + I++ + D+I A
Sbjct: 82 --DFGNWNQEKLSKNNINLINLDIEKDKLPFESNHFDLIIA 120
>gi|56708773|ref|YP_170669.1| hypothetical protein FTT_1781c [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110671245|ref|YP_667802.1| hypothetical protein FTF1781c [Francisella tularensis subsp.
tularensis FSC198]
gi|254371383|ref|ZP_04987384.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254875641|ref|ZP_05248351.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56605265|emb|CAG46414.1| hypothetical protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110321578|emb|CAL09797.1| hypothetical protein FTF1781c [Francisella tularensis subsp.
tularensis FSC198]
gi|151569622|gb|EDN35276.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254841640|gb|EET20076.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 249
Score = 37.8 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 16/101 (15%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + RH+ DS F +D+G G G ++ + +
Sbjct: 38 DHNETYGRHILDS---FSKFRGFKNVLDIGCGAGSDLLVVKKCNNKANLTGI-------- 86
Query: 110 KASFLRYVVQKTAARG-KVFACRIQEAPQMITT--CDVISA 147
F + +K + + I++ + D+I A
Sbjct: 87 --DFGNWNQEKLSKNNINLINLDIEKDKLPFESNHFDLIIA 125
>gi|229064979|ref|ZP_04200277.1| Protein hemK [Bacillus cereus AH603]
gi|228716280|gb|EEL67992.1| Protein hemK [Bacillus cereus AH603]
Length = 283
Score = 37.8 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEELHIADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGADVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|188501450|gb|ACD54583.1| HemK-like protein methyltransferase-like protein [Adineta vaga]
Length = 322
Score = 37.8 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G G G I+ + + E V++ ++ + S + A V A
Sbjct: 141 PAVRRVVDIGCGAGPGAIMLAKTYPNAEILGVDINDTALRLTS-----INARLANVNVIA 195
Query: 130 CRIQEAPQMITTCDVISA 147
C + D+I +
Sbjct: 196 CHSDLLKDVQGDFDMIIS 213
>gi|306821075|ref|ZP_07454693.1| ribosomal protein L11 methyltransferase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550911|gb|EFM38884.1| ribosomal protein L11 methyltransferase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 319
Score = 37.4 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 6/85 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + ID+G G G I SI + + V ++ + V+
Sbjct: 173 AIEKYMKKGDSLIDIGCGSG----ILSIAAAHLGAQKVVAVDLDRLAVKVSKENVELNGF 228
Query: 124 RGKVFACRIQEAPQMI-TTCDVISA 147
+ R + +I DVI A
Sbjct: 229 SNTIDV-RYGDLTDVIDEKADVIVA 252
>gi|167587182|ref|ZP_02379570.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia ubonensis Bu]
Length = 287
Score = 37.4 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S IES ++ ++ +
Sbjct: 117 LTLARLAPAPDELLWDVGAGCGSIGIEWMRAHPSCRAIA---IESHAERQRYIEHNRDAL 173
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 174 GVPGLQLVAGRAPDALAGLAAPDAI 198
>gi|90414824|ref|ZP_01222791.1| putative adenine-specific methylase [Photobacterium profundum 3TCK]
gi|90324067|gb|EAS40654.1| putative adenine-specific methylase [Photobacterium profundum 3TCK]
Length = 310
Score = 37.4 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P+ +DL +G G GI + E V+L++ + + +V
Sbjct: 129 LQQEPTRIMDLCTGSGCIGIACAHAFPDAE---VDLVDISIDALAVAEQNINDHGLEQQV 185
Query: 128 FACR---IQEAPQMITTCDVIS 146
R +++ P+ D+I
Sbjct: 186 IPLRSDLLRDVPK--DKYDLIV 205
>gi|331682701|ref|ZP_08383320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli H299]
gi|331080332|gb|EGI51511.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli H299]
Length = 277
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALACERPDCE---ITAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|261492828|ref|ZP_05989375.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261494807|ref|ZP_05991285.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261309518|gb|EEY10743.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311510|gb|EEY12666.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 329
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + + G+V A
Sbjct: 190 KGKVLDLGCGAGVIGATLKQQFPKIK---LTMSDIHAMALESGRRTLAENQLEGEVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ +L
Sbjct: 247 V--FSHINERFDLIVSNPPFHDGVDTAYRAVEEL 278
>gi|229170036|ref|ZP_04297728.1| Protein hemK [Bacillus cereus AH621]
gi|228613461|gb|EEK70594.1| Protein hemK [Bacillus cereus AH621]
Length = 283
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEELHIADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGADVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|254363054|ref|ZP_04979113.1| rRNA (guanine-N(2)-)-methyltransferase [Mannheimia haemolytica
PHL213]
gi|153094719|gb|EDN75509.1| rRNA (guanine-N(2)-)-methyltransferase [Mannheimia haemolytica
PHL213]
Length = 329
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + + G+V A
Sbjct: 190 KGKVLDLGCGAGVIGATLKQQFPKIK---LTMSDIHAMALESGRRTLAENQLEGEVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ +L
Sbjct: 247 V--FSHINERFDLIVSNPPFHDGVDTAYRAVEEL 278
>gi|163943016|ref|YP_001647900.1| HemK family modification methylase [Bacillus weihenstephanensis
KBAB4]
gi|163865213|gb|ABY46272.1| modification methylase, HemK family [Bacillus weihenstephanensis
KBAB4]
Length = 283
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEELHIADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGADVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|315633573|ref|ZP_07888863.1| methyltransferase domain protein [Aggregatibacter segnis ATCC
33393]
gi|315477615|gb|EFU68357.1| methyltransferase domain protein [Aggregatibacter segnis ATCC
33393]
Length = 266
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 21/130 (16%)
Query: 38 KWSKKI-----NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQ 92
KW KK NLV ++ + + + ++++V +D+G G G I +
Sbjct: 28 KWDKKAVKMAENLVGKASR---YNQQLLETMQVQP----DESVLDIGCGPGTFAIPLA-- 78
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI-QEAPQMITTCDVIS-ARA- 149
+G V ++ L QK R E + DVI +R+
Sbjct: 79 ---QQGSQVYALDYSTGMLDVLAEYKQKLQLENLNLIRRSWLENWDDVPQADVILASRST 135
Query: 150 -LADLDTLLE 158
+ DLD ++E
Sbjct: 136 LVDDLDDMIE 145
>gi|302038102|ref|YP_003798424.1| methyltransferase, ubiE family [Candidatus Nitrospira defluvii]
gi|300606166|emb|CBK42499.1| Methyltransferase, ubiE family [Candidatus Nitrospira defluvii]
Length = 273
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 14/95 (14%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+F+ R L++ S +D+G G G ++ + +G V ++
Sbjct: 39 EFYER-----LQIAP----GSRLLDVGCGSGQLALLAA-----KDGVEVTGVDIAANWVE 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + P + DVI +
Sbjct: 85 RAQARARAEGVNARFKVADAEALPFEAASFDVIVS 119
>gi|228911167|ref|ZP_04074973.1| Protein hemK [Bacillus thuringiensis IBL 200]
gi|228848530|gb|EEM93378.1| Protein hemK [Bacillus thuringiensis IBL 200]
Length = 283
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------KELHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKSLGAEVTFYHGDLLSPFDKTGQKLDVVVS 187
>gi|229136147|ref|ZP_04264900.1| Protein hemK [Bacillus cereus BDRD-ST196]
gi|228647306|gb|EEL03388.1| Protein hemK [Bacillus cereus BDRD-ST196]
Length = 283
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEELHIADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGADVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|229199454|ref|ZP_04326117.1| Protein hemK [Bacillus cereus m1293]
gi|228584030|gb|EEK42185.1| Protein hemK [Bacillus cereus m1293]
Length = 283
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ + ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---MYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKTLGAEVTFYHGDLLSPFYETGQKLDVVVS 187
>gi|222147270|ref|YP_002548227.1| Sun protein [Agrobacterium vitis S4]
gi|221734260|gb|ACM35223.1| Sun protein [Agrobacterium vitis S4]
Length = 428
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D +GGG G ++ + G V+ +S K+ + + +++
Sbjct: 231 EGHQVLDFCAGGG--GKTLAMAAAMGNKGQVHAYDSDRKRLAPIIERLKRAGTHNIQVHD 288
Query: 131 RIQEAPQMITTCDVI 145
R+ + D +
Sbjct: 289 RVAALQSLTGRFDKV 303
>gi|220928239|ref|YP_002505148.1| methyltransferase small [Clostridium cellulolyticum H10]
gi|219998567|gb|ACL75168.1| methyltransferase small [Clostridium cellulolyticum H10]
Length = 198
Score = 37.4 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P +D+G G G G+ + +I+ N+ + +
Sbjct: 51 IKNFTPSGMSVLDIGCGYGAIGLYIKSIFPQQN---ITMIDVNNRALDYTKKNAASNNLS 107
Query: 125 GKVFACRIQEAPQMITTCDVIS 146
+ + A + T D+IS
Sbjct: 108 VEALNSNLFTALEGRTFDDIIS 129
>gi|322418261|ref|YP_004197484.1| type 11 methyltransferase [Geobacter sp. M18]
gi|320124648|gb|ADW12208.1| Methyltransferase type 11 [Geobacter sp. M18]
Length = 273
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 7/77 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT-AARGKVFAC 130
P +D+G+G G + ++ V+L + R +V
Sbjct: 46 PVQLLDIGAGTGRLLARLADLYPDVDAVGVDLAPGM------CETAARNLAGRRVRVMNA 99
Query: 131 RIQEAPQMITTCDVISA 147
+ P + DV+ +
Sbjct: 100 DAESLPFEAGSFDVVVS 116
>gi|213968468|ref|ZP_03396611.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301386087|ref|ZP_07234505.1| hypothetical protein PsyrptM_25774 [Pseudomonas syringae pv. tomato
Max13]
gi|302060245|ref|ZP_07251786.1| hypothetical protein PsyrptK_09647 [Pseudomonas syringae pv. tomato
K40]
gi|302131987|ref|ZP_07257977.1| hypothetical protein PsyrptN_11384 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213926756|gb|EEB60308.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 319
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+G G G ++ ++ + V ++ K F + +
Sbjct: 141 KRAADIGCGTGAGALLIAVARPDAQ---VYAVDINPKALHFAQANAVVAGLHNMQCCHSD 197
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 198 I--LSGLTGNFDLIVA 211
>gi|138895345|ref|YP_001125798.1| cobalamin biosynthesis protein CbiET [Geobacillus
thermodenitrificans NG80-2]
gi|134266858|gb|ABO67053.1| Cobalamin biosynthesis protein CbiET [Geobacillus
thermodenitrificans NG80-2]
Length = 401
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +L P +W D+G+ G I + G V IE + R ++K
Sbjct: 236 SLSALRLRPDSVVW-DIGTCTGSVAIEAA---KIARDGAVFAIEKNEQDIELCRQNLRKF 291
Query: 122 AARGKVFACRIQEAPQMITTCDVI----SARALADL 153
+ R + D I ++ A+A L
Sbjct: 292 RVDITLVHGRAPDRLDEFADPDAIFIGGTSGAMAPL 327
>gi|116750353|ref|YP_847040.1| O-methyltransferase family protein [Syntrophobacter fumaroxidans
MPOB]
gi|116699417|gb|ABK18605.1| O-methyltransferase, family 3 [Syntrophobacter fumaroxidans MPOB]
Length = 196
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + W+++G+G G+ + ++ LV +E +K R ++ T
Sbjct: 45 IALLAASAPEGDWLEIGTGAGYSTLWLALACLETSRNLVT-VEVSEEKVRLARETIRLTG 103
Query: 123 ARGKVFACR 131
V R
Sbjct: 104 LESIVKCIR 112
>gi|78221602|ref|YP_383349.1| modification methylase HemK [Geobacter metallireducens GS-15]
gi|78192857|gb|ABB30624.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter
metallireducens GS-15]
Length = 284
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P+ + +D+G G G + + L + V +E + R V++ R
Sbjct: 111 ALRRAPHAATVLDIGVGSGCIAVALAKNLPDAQ---VWGVEQSAGAITLARQNVERHGVR 167
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ A + E P D+I +
Sbjct: 168 VILCAGSLFE-PFADQRFDLIVS 189
>gi|126441078|ref|YP_001058118.1| UbiE/COQ5 family methlytransferase [Burkholderia pseudomallei 668]
gi|126220571|gb|ABN84077.1| methyltransferase, UbiE/COQ5 family [Burkholderia pseudomallei 668]
Length = 251
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + ++ ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVQAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|319745564|gb|EFV97866.1| tellurite resistance protein TehB [Streptococcus agalactiae ATCC
13813]
Length = 291
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK L T + + L S +DLG G G + S+ G
Sbjct: 103 KKYGLT--RTHSEV--------IASAPLLSEKSNILDLGCGQGRNSLYLSLL-----GHQ 147
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++S + L + + + I A + D I +
Sbjct: 148 VTSVDSNGQSIVALENMALEEGLPYNIKWYDINTA-TIEGHYDFILS 193
>gi|194691654|gb|ACF79911.1| unknown [Zea mays]
Length = 181
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-------QKTAAR 124
++LGSG G G++ + +S V + + + A +++ + +T +
Sbjct: 2 SKKVLELGSGYGLAGLVIA---ASTNADEVVISDGNPQVAEYIQKNISINAETFGETKVK 58
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ ++A +M+ T D+I A
Sbjct: 59 SLILHWDKEQASEMLNTFDIIVA 81
>gi|197123372|ref|YP_002135323.1| methyltransferase type 11 [Anaeromyxobacter sp. K]
gi|196173221|gb|ACG74194.1| Methyltransferase type 11 [Anaeromyxobacter sp. K]
Length = 221
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 22/106 (20%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +++G+G G + G V IE + LR + V A
Sbjct: 51 PRTIVEIGAGSG------ANFRYLAPGTHVIAIEPNVHVHASLRAAAARCQLTVDVRATA 104
Query: 132 IQEAPQMITTCDVISA-----------RALADLDTLLE-----YSF 161
+ P + D + + RALA++ +L +
Sbjct: 105 AERLPLPDRSVDAVISSLVLCTVPDPARALAEIRRVLRADGRFWCL 150
>gi|85111383|ref|XP_963910.1| protein arginine N-methyltransferase 1 [Neurospora crassa OR74A]
gi|28925659|gb|EAA34674.1| protein arginine N-methyltransferase 1 [Neurospora crassa OR74A]
Length = 346
Score = 37.4 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 9/100 (9%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ + S+ + I +D+G G G I S+ + V ++
Sbjct: 41 KDEVRTKSYMHSIVQNKHLFKDKIVLDVGCGTG----ILSMFAAKAGAKHVIGVDMST-- 94
Query: 111 ASF-LRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
F R +V+ K+ +++E D+I +
Sbjct: 95 IIFKAREIVKVNGLSDKITLIQGKMEEIELPFPKVDIIIS 134
>gi|167835843|ref|ZP_02462726.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
thailandensis MSMB43]
Length = 251
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+L + +DLG G G + + V + + + + +
Sbjct: 30 LDTLAAEIGATPGARVLDLGCGAGHASFAAARGGAQ----EVIAYDLAPQMLATVEAAAR 85
Query: 120 KTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+ ++ + P + D I +R
Sbjct: 86 ERGLADVRIEQGAAERLPFADASFDWIVSR 115
>gi|171184846|ref|YP_001793765.1| methyltransferase type 12 [Thermoproteus neutrophilus V24Sta]
gi|170934058|gb|ACB39319.1| Methyltransferase type 12 [Thermoproteus neutrophilus V24Sta]
Length = 254
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
S +++G+G G + + V +E + A +LR ++ + V R
Sbjct: 58 SSVLEVGAGAGAYAVPLA-----KRVSRVVAVEPSREMARYLRKYAEEEGVKVDVVEKRW 112
Query: 133 QEAP-QMITTCDVISARALADLDTLLE 158
+E + + D+ ALA L+E
Sbjct: 113 EEVSLEEVGRHDL----ALAAHSLLVE 135
>gi|54024505|ref|YP_118747.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152]
gi|54016013|dbj|BAD57383.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152]
Length = 385
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ D+G+G G + + L+ V + + R +++ +V
Sbjct: 205 VVFDIGTGTG----VLAAVLAQRGAADVRATDLNPRAVRCARSNLRRLGLDDRVHVAEAD 260
Query: 134 EAPQMITTCDVISA 147
P + D+I
Sbjct: 261 LWPAVPAHADLIVC 274
>gi|256845603|ref|ZP_05551061.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Fusobacterium sp. 3_1_36A2]
gi|256719162|gb|EEU32717.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Fusobacterium sp. 3_1_36A2]
Length = 383
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ V I+ K
Sbjct: 187 CIQLMREVEEPN-ILDIGSGSGAISIAIA---NELKSSSVTGIDINEKAIELANENKTLN 242
Query: 122 AARGKVF-ACRIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 243 KIENVNFIKSDLFEKIDKDFKYDLIVS 269
>gi|229085650|ref|ZP_04217881.1| Methyltransferase type 11 [Bacillus cereus Rock3-44]
gi|228697676|gb|EEL50430.1| Methyltransferase type 11 [Bacillus cereus Rock3-44]
Length = 261
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRI 132
+D+ +GGG + S V ++ K + + F A
Sbjct: 44 HLLDIATGGGHVVNTLAPLFKS-----VIALDLTEKMIEKAKEFIHSNGHDNVSFVAGNA 98
Query: 133 QEAPQMITTCDVISAR 148
++ P + D + R
Sbjct: 99 EDLPFSDASFDTVVCR 114
>gi|218437389|ref|YP_002375718.1| methyltransferase type 11 [Cyanothece sp. PCC 7424]
gi|218170117|gb|ACK68850.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424]
Length = 277
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 11/107 (10%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+ N + R V + ++ P +++G G G + + +G
Sbjct: 28 EAYNKTRPRYPQKILDR-VLELAQI----PQNGSILEIGCGPGTATVDLA-----EKGFK 77
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +E + R Q +V +E D + A
Sbjct: 78 MVCLEPSLEACQIARQNCQ-NYPHVEVKNSTFEEWELDTEKFDAVVA 123
>gi|91773863|ref|YP_566555.1| methyltransferase type 12 [Methanococcoides burtonii DSM 6242]
gi|91712878|gb|ABE52805.1| methyltransferase [Methanococcoides burtonii DSM 6242]
Length = 291
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 8/82 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
S +D+GSG G I S V +E + S L+ +++
Sbjct: 69 LKSDSRVLDIGSGPGALAIPIS-----KRVREVVAVEPSDGMMSVLQENIEELDISNINC 123
Query: 128 FACRIQE--APQMITTCDVISA 147
++ ++ D++ A
Sbjct: 124 IHKGWEDINIDELGGKFDLVIA 145
>gi|20094199|ref|NP_614046.1| RNA methylase [Methanopyrus kandleri AV19]
gi|19887221|gb|AAM01976.1| Predicted RNA methylase [Methanopyrus kandleri AV19]
Length = 248
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ DLG+G G S+ + V +E K+A L ++K +
Sbjct: 42 EDTFADLGAGTG----PLSVVAAHAGAERVIAVEKNPKRARLLEKNLRKHVPHDVEWEVV 97
Query: 132 IQEAPQMITTCDVI 145
+ +A + DV+
Sbjct: 98 VGDARDVDVNADVV 111
>gi|56475930|ref|YP_157519.1| 3-demethylubiquinone-9 3-methyltransferase [Aromatoleum aromaticum
EbN1]
gi|81358433|sp|Q5P7U3|UBIG_AZOSE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|56311973|emb|CAI06618.1| 3-demethylubiquinone-9 3-methyltransferase [Aromatoleum aromaticum
EbN1]
Length = 234
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG + G V I+ K R + ++ +
Sbjct: 49 GKRVLDIGCGGGILSESMAAA-----GAHVTGIDLSEKALGVARLHLFESGQKVDYHHAS 103
Query: 132 IQE-APQMITTCDVISA 147
+E A Q D+++
Sbjct: 104 AEEFAAQHAGEFDIVTC 120
>gi|37523940|ref|NP_927317.1| hypothetical protein glr4371 [Gloeobacter violaceus PCC 7421]
gi|35214946|dbj|BAC92312.1| glr4371 [Gloeobacter violaceus PCC 7421]
Length = 281
Score = 37.4 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ W+R D L V + P +DLG G G ++ + G V ++
Sbjct: 82 PNETWVR---DCL-VKAVTRPPGRILDLGCGTGSTTVLLARAFP---GARVTGLDLSADM 134
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
R ++ + + + + D++SA
Sbjct: 135 LVAARLKAKREKLAVEWLHGDARASGLPEASFDLVSA 171
>gi|331017756|gb|EGH97812.1| hypothetical protein PLA106_17069 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 319
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
D+G G G ++ ++ + V ++ K F + +
Sbjct: 141 KRAADIGCGTGAGALLIAVARPDAQ---VYAVDINPKALHFAQANAVVAGLHNMQCCHSD 197
Query: 132 IQEAPQMITTCDVISA 147
I + D+I A
Sbjct: 198 I--LSGLTGNFDLIVA 211
>gi|298482443|ref|ZP_07000629.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides sp. D22]
gi|295088114|emb|CBK69637.1| HemK family putative methylases [Bacteroides xylanisolvens XB1A]
gi|298271422|gb|EFI12997.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides sp. D22]
Length = 278
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +P +D+G+G G I +L + V + + + R AR
Sbjct: 103 IVEENPNARRLLDIGTGSGCIAISLDKKLPDAK---VEAWDISEEALAIARKNNDALEAR 159
Query: 125 GKVFACRI-QEAPQMITTCDVISA 147
+ + + + I + DVI +
Sbjct: 160 VRFLQRDVLADDWEKIPSFDVIVS 183
>gi|209965919|ref|YP_002298834.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodospirillum centenum
SW]
gi|209959385|gb|ACJ00022.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodospirillum centenum
SW]
Length = 263
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 21/77 (27%), Gaps = 5/77 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + V I++ + +T
Sbjct: 79 EGIRILDVGCGGGLIAEPLARLGAE-----VVGIDASERNVKTAATHALETGTTVDYRVG 133
Query: 131 RIQEAPQMITTCDVISA 147
+ DV+ A
Sbjct: 134 TAEALAATGERFDVVLA 150
>gi|119946174|ref|YP_943854.1| 3-demethylubiquinone-9 3-methyltransferase [Psychromonas ingrahamii
37]
gi|119864778|gb|ABM04255.1| 3-demethylubiquinone-9 3-methyltransferase [Psychromonas ingrahamii
37]
Length = 254
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 13/110 (11%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+SL+ F+ ++D+G GGG + + V ++ + + +K
Sbjct: 59 NSLKPFE----GLRFLDIGCGGGLLSEPMAQLGAE-----VVGADAAARNIPVAQIHAEK 109
Query: 121 TAARGKVFACRIQEAPQMITTCDVI----SARALADLDTLLEYSFPWLYQ 166
+ + DVI +A L L
Sbjct: 110 SGLTIDYRHTMAEALVDEGELFDVILNMEVIEHVASPQVFLNACAELLKP 159
>gi|332799053|ref|YP_004460552.1| 50S ribosomal protein L11 methyltransferase [Tepidanaerobacter sp.
Re1]
gi|332696788|gb|AEE91245.1| Ribosomal protein L11 methyltransferase [Tepidanaerobacter sp. Re1]
Length = 314
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + + ID+G G G I SI + V I+ R +++
Sbjct: 163 CLEILEKYIKKDITVIDVGCGSG----ILSIASGKLGAKQVLAIDRDENAVRIARENIKR 218
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
V A + + + D+I A
Sbjct: 219 NNLETCVRAVKGDKLQNINFKADIIVA 245
>gi|239946840|ref|ZP_04698593.1| methyltransferase [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921116|gb|EER21140.1| methyltransferase [Rickettsia endosymbiont of Ixodes scapularis]
Length = 554
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
S ++LG G I ++ V+L SK + V++ + +
Sbjct: 72 ENSKILELGCAAGGNLIPHAVLYPKAHFVGVDL--SKVQ-IDEANKNVKELGLKNIEFHH 128
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 129 CSITDIDDSFGKFDYIIC 146
>gi|170751295|ref|YP_001757555.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
gi|170657817|gb|ACB26872.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
Length = 324
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G G G GI + G V L++ R + G R
Sbjct: 143 RRAVDIGCGSGAAGICVA---KRAPGAEVVLVDINPAAMRAARVNARLAGTDGVDVR-RS 198
Query: 133 QEAPQMITTCDVISA 147
+ D+I +
Sbjct: 199 DMLRDVEGQFDLIVS 213
>gi|119487764|ref|ZP_01621273.1| hypothetical protein L8106_29820 [Lyngbya sp. PCC 8106]
gi|119455597|gb|EAW36734.1| hypothetical protein L8106_29820 [Lyngbya sp. PCC 8106]
Length = 441
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 8/106 (7%)
Query: 47 SSSTVEDF-WIRHVEDSLRV---FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
S D +I ++ S + ++ + +D G G G+ ++ + G +
Sbjct: 29 SPKESYDILYIHNLVTSYYLRNQKFINTEGKVILDAGCGSGYKSLVLAEANP---GAKIV 85
Query: 103 LIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQMITTCDVISA 147
++ K + ++ F I+E PQ+ D I+A
Sbjct: 86 GVDLSAKSVDLAQKRLEHYGFTNCEFHAISIEELPQLGLEFDYINA 131
>gi|67459646|ref|YP_247270.1| hypothetical protein RF_1254 [Rickettsia felis URRWXCal2]
gi|67005179|gb|AAY62105.1| unknown [Rickettsia felis URRWXCal2]
Length = 509
Score = 37.4 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ ++LG G I ++ V+L SK + V++ + +
Sbjct: 69 ENAKILELGCAAGGNLIPHAVLYPKAHFVGVDL--SKVQ-VDEANKNVKELGLKNIEFHH 125
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 126 CSITDIDDSFGKFDYIIC 143
>gi|315159265|gb|EFU03282.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0312]
Length = 277
Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 12/92 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++L E K + + Q A + +
Sbjct: 139 IAIDLSE---KALTVAKQNAQALGAGIEFYHG 167
>gi|297802326|ref|XP_002869047.1| hypothetical protein ARALYDRAFT_328155 [Arabidopsis lyrata subsp.
lyrata]
gi|297314883|gb|EFH45306.1| hypothetical protein ARALYDRAFT_328155 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-------TAAR 124
I+LGSG G G++ + E V + + + ++++ ++ T+ +
Sbjct: 132 GKRVIELGSGYGLAGLVIAAV---TEASEVVISDGNPQVVNYIKRNIESNSMAFGGTSVK 188
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
E P++ T D+I A
Sbjct: 189 AMELHWNQHELPELTNTFDIIVA 211
>gi|256963677|ref|ZP_05567848.1| modification methylase HemK [Enterococcus faecalis HIP11704]
gi|307271623|ref|ZP_07552894.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0855]
gi|256954173|gb|EEU70805.1| modification methylase HemK [Enterococcus faecalis HIP11704]
gi|306511501|gb|EFM80500.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0855]
gi|315170192|gb|EFU14209.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX1342]
Length = 277
Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 12/92 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++L E K + + Q A + +
Sbjct: 139 IAIDLSE---KALTVAKQNAQALGAGIEFYHG 167
>gi|269124815|ref|YP_003298185.1| type 11 methyltransferase [Thermomonospora curvata DSM 43183]
gi|268309773|gb|ACY96147.1| Methyltransferase type 11 [Thermomonospora curvata DSM 43183]
Length = 356
Score = 37.4 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D+G G G+ + + + V+ I++ R + G+ R +
Sbjct: 178 RIADVGCGQGWSSLALARAFPN---AWVDGIDADAASIEDARRHAAEAGLDGR-LRFRCE 233
Query: 134 EAPQM-ITTCDVIS 146
+A ++ D+I
Sbjct: 234 DAAELADGPYDLIV 247
>gi|332346417|gb|AEE59751.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
UMNK88]
Length = 343
Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 16/110 (14%)
Query: 45 LVSSSTVEDFWIRHVEDSL------RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIE 97
L T+ + R DSL + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSR---DSLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR 222
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 ---LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|312899932|ref|ZP_07759250.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0470]
gi|311292928|gb|EFQ71484.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0470]
Length = 277
Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 12/92 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++L E K + + Q A + +
Sbjct: 139 IAIDLSE---KALTVAKQNAQALGAGIEFYHG 167
>gi|292572438|gb|ADE30353.1| Putative methyltransferase [Rickettsia prowazekii Rp22]
Length = 553
Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
S ++LG G I ++ + V+L SK + V+ + +
Sbjct: 71 ENSKILELGCAAGGNLIPHAVLYPNAHFVGVDL--SKVQ-IDEANKNVRALGLKNIEFHH 127
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 128 CSITDIDDSFGKFDYIIC 145
>gi|237719658|ref|ZP_04550139.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450927|gb|EEO56718.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 232
Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +P +D+G+G G I +L E V + + + R AR
Sbjct: 57 IVEENPNARRLLDIGTGSGCIAISLDKKLPDAE---VEAWDISEEALAIARKNNDALEAR 113
Query: 125 GKVFACRI-QEAPQMITTCDVISA 147
+ + + + I + DVI +
Sbjct: 114 VRFLQRDVLADDWEKIPSFDVIVS 137
>gi|212526022|ref|XP_002143168.1| ubiE/COQ5 methyltransferase, putative [Penicillium marneffei ATCC
18224]
gi|210072566|gb|EEA26653.1| ubiE/COQ5 methyltransferase, putative [Penicillium marneffei ATCC
18224]
Length = 272
Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Query: 60 EDSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+S + +D+G G G + + + G + +ES + R +
Sbjct: 28 LNSAAYILPHLKPDMKVLDIGCGPGTITVDLASYVP---RGYITGLESAEGVLTQARALA 84
Query: 119 QKTAARGKVF-ACRIQEAPQMITTCDVISA 147
++ + F + DV+
Sbjct: 85 EEKGVKNIDFVVGDANGLAYEDQSFDVVIC 114
>gi|168004451|ref|XP_001754925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694029|gb|EDQ80379.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 10/108 (9%)
Query: 43 INLVSSSTVEDFWIRHVE-DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+N S V +H D+ L +D+G GGG + GG V
Sbjct: 53 MNPTRVSYVRSQICKHFGKDANTPRPL--EGLKILDVGCGGGLVCEPLARM-----GGEV 105
Query: 102 NLIESKNKKA--SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ +K + + A K + Q DV+ A
Sbjct: 106 TGVDAVDKNIGVASVHAARDPATASIKYVCTTAEHLVQEQQKFDVVLA 153
>gi|56420335|ref|YP_147653.1| precorrin-6Y C5,15-methyltransferase [Geobacillus kaustophilus
HTA426]
gi|56380177|dbj|BAD76085.1| precorrin-6Y C5,15-methyltransferase [decarboxylating] (precorrin-6
methyltransferase) [Geobacillus kaustophilus HTA426]
Length = 401
Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 8/96 (8%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +L P +W D+G+ G I + G V IE + R ++K
Sbjct: 236 SLSALRLRPDSVVW-DIGTCTGSVAIEAA---KIARDGAVFAIEKNEQDIELCRQNLRKF 291
Query: 122 AARGKVFACRIQEAPQMITTCDVI----SARALADL 153
+ R + D I ++ A+A L
Sbjct: 292 RVDITLVHGRAPDRLDEFADPDAIFIGGTSGAMAPL 327
>gi|15604621|ref|NP_221139.1| hypothetical protein RP789 [Rickettsia prowazekii str. Madrid E]
gi|6226396|sp|O05979|Y789_RICPR RecName: Full=Uncharacterized protein RP789
gi|3861316|emb|CAA15215.1| unknown [Rickettsia prowazekii]
Length = 553
Score = 37.4 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
S ++LG G I ++ + V+L SK + V+ + +
Sbjct: 71 ENSKILELGCAAGGNLIPHAVLYPNAHFVGVDL--SKVQ-IDEANKNVRALGLKNIEFHH 127
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 128 CSITDIDDSFGKFDYIIC 145
>gi|321441999|gb|ADW85414.1| arg methyltransferase [Janiodes laverna nigropuncta]
Length = 244
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGATKVIAVECSN-IVDYARKIIEANGLSEV 72
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|307110906|gb|EFN59141.1| hypothetical protein CHLNCDRAFT_137966 [Chlorella variabilis]
Length = 821
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+IN + + H +L V P +D G+ GF + + + +
Sbjct: 567 RINSTDILVFQQIYRHHYLRALYVLLRDYQPRYILDAGANAGFSTSLFKLLFPN---ATI 623
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
+E + L ++ + +V A + + D
Sbjct: 624 VSLEPDAHNHAALMRNTEEFSDVHRVRAGLWSRQANITQSFD 665
>gi|294102752|ref|YP_003554610.1| Methyltransferase type 11 [Aminobacterium colombiense DSM 12261]
gi|293617732|gb|ADE57886.1| Methyltransferase type 11 [Aminobacterium colombiense DSM 12261]
Length = 267
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L P I +DLGSGGGF + + + + G V ++ R + +K
Sbjct: 77 LGIASLKP-GDIVLDLGSGGGFDCFLAAQAVG--KDGFVIGVDMTPNMIDKARSIAEKEN 133
Query: 123 ARGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P + D++ +
Sbjct: 134 YSNVEFRLGEIEHLPVADASVDIVIS 159
>gi|307728967|ref|YP_003906191.1| methyltransferase type 11 [Burkholderia sp. CCGE1003]
gi|307583502|gb|ADN56900.1| Methyltransferase type 11 [Burkholderia sp. CCGE1003]
Length = 250
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 31/105 (29%), Gaps = 10/105 (9%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L S + +R + D++ + +D+G G G + V
Sbjct: 19 LTSPTHASGADLRTLADAVAATP----GATVLDMGCGAGHASFAVA-----PHAKEVVAY 69
Query: 105 ESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+ + + ++ + + P T D + +R
Sbjct: 70 DIAAPMLATVEGAAKERGLANIRTQQGAAESLPFDDQTFDWVISR 114
>gi|271500610|ref|YP_003333635.1| type 11 methyltransferase [Dickeya dadantii Ech586]
gi|270344165|gb|ACZ76930.1| Methyltransferase type 11 [Dickeya dadantii Ech586]
Length = 256
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ +DLG G G + + + V + + + Q+ +
Sbjct: 47 TCVLDLGCGAGHVSFTIASLVEN-----VVACDLSPRMLDVVASAAQEKGLANIRTEQAV 101
Query: 132 IQEAPQMITTCDVISAR 148
+ P + DV+ +R
Sbjct: 102 AESLPFADGSFDVVVSR 118
>gi|297559190|ref|YP_003678164.1| methyltransferase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296843638|gb|ADH65658.1| methyltransferase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 193
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +DL +G G G+ ++ + L+E+ + A LR +Q G ++ A
Sbjct: 45 DGARVMDLYAGSGAIGLE-ALSRGAAHA---LLVEADRRAAQVLRDNIQTLGLPGARLVA 100
Query: 130 CRIQE---APQMITTCDVISA 147
R++ A DV+ A
Sbjct: 101 DRVERVVGADNTGDPYDVVVA 121
>gi|218513832|ref|ZP_03510672.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli 8C-3]
Length = 247
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + +K + + A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GASVVGADPSDKNIGIASTHAKASGVPVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+E + T D++
Sbjct: 119 TAEELAEAGETFDIV 133
>gi|198455174|ref|XP_001359888.2| GA19687 [Drosophila pseudoobscura pseudoobscura]
gi|198133129|gb|EAL29040.2| GA19687 [Drosophila pseudoobscura pseudoobscura]
Length = 514
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI S + I++ + + V + ++ R
Sbjct: 242 GKTVLDVGCGTG----ILSIFASQAGASRIVGIDNSEIVYTAMDIVRKNNVKNVELVKGR 297
Query: 132 IQEAPQMITTCDVISA 147
+++ D+I +
Sbjct: 298 LEDTELPEAKYDIIIS 313
>gi|86359343|ref|YP_471235.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli CFN 42]
gi|109895911|sp|Q2K3S8|UBIG_RHIEC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|86283445|gb|ABC92508.1| 3-demethylubiquinone-9 3-methyltransferase protein [Rhizobium etli
CFN 42]
Length = 248
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + K + + A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GASVVGADPSEKNIGIASTHAKASGVSVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+E + T D++
Sbjct: 119 TAEELAEAGETFDIV 133
>gi|53725184|ref|YP_102495.1| UbiE/COQ5 family methlytransferase [Burkholderia mallei ATCC 23344]
gi|67640107|ref|ZP_00438926.1| methyltransferase, UbiE/COQ5 family [Burkholderia mallei GB8 horse
4]
gi|121601303|ref|YP_993597.1| UbiE/COQ5 family methlytransferase [Burkholderia mallei SAVP1]
gi|124385978|ref|YP_001028941.1| UbiE/COQ5 family methlytransferase [Burkholderia mallei NCTC 10229]
gi|126449979|ref|YP_001081146.1| UbiE/COQ5 family methlytransferase [Burkholderia mallei NCTC 10247]
gi|167003499|ref|ZP_02269285.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei PRL-20]
gi|254178057|ref|ZP_04884712.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei ATCC
10399]
gi|254199400|ref|ZP_04905766.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei FMH]
gi|254205715|ref|ZP_04912067.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei JHU]
gi|254357873|ref|ZP_04974146.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei
2002721280]
gi|52428607|gb|AAU49200.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei ATCC
23344]
gi|121230113|gb|ABM52631.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei SAVP1]
gi|124293998|gb|ABN03267.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei NCTC
10229]
gi|126242849|gb|ABO05942.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei NCTC
10247]
gi|147748996|gb|EDK56070.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei FMH]
gi|147753158|gb|EDK60223.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei JHU]
gi|148027000|gb|EDK85021.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei
2002721280]
gi|160699096|gb|EDP89066.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei ATCC
10399]
gi|238520761|gb|EEP84218.1| methyltransferase, UbiE/COQ5 family [Burkholderia mallei GB8 horse
4]
gi|243060973|gb|EES43159.1| methlytransferase, UbiE/COQ5 family [Burkholderia mallei PRL-20]
Length = 251
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|67925070|ref|ZP_00518449.1| similar to Methylase involved in ubiquinone/menaquinone
biosynthesis [Crocosphaera watsonii WH 8501]
gi|67853093|gb|EAM48473.1| similar to Methylase involved in ubiquinone/menaquinone
biosynthesis [Crocosphaera watsonii WH 8501]
Length = 306
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
S+ QL P +D+G G + + ++L A RY Q
Sbjct: 126 YHSILKQQLSLNPQTILDIGCSVGMSTFPLQEMYPNAKLTGLDLSAYHLAVA---RYRSQ 182
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ +E + D++S+
Sbjct: 183 QRNLDIDWVHAAAEETSLPSASFDLVSS 210
>gi|108805666|ref|YP_645603.1| type 11 methyltransferase [Rubrobacter xylanophilus DSM 9941]
gi|108766909|gb|ABG05791.1| Methyltransferase type 11 [Rubrobacter xylanophilus DSM 9941]
Length = 246
Score = 37.4 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + + L P + +DLGSGGG GG V ++ + R +
Sbjct: 51 DPVSLAGLSP-GEVVLDLGSGGGLDA--LRAARRVSPGGRVYGLDMTGEMVELARRNASE 107
Query: 121 TAARGKVF-ACRIQEAPQMITTCDVISA 147
F I++ P + D + +
Sbjct: 108 AGVHNVEFLQGEIEDIPLPDASVDAVMS 135
>gi|312602569|ref|YP_004022414.1| hypothetical protein RBRH_00230 [Burkholderia rhizoxinica HKI 454]
gi|312169883|emb|CBW76895.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
Length = 216
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 11/90 (12%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ D L V+ P + +DLG+G G + + + L++ +
Sbjct: 35 HI-DQLLVWAELPIGANVLDLGAGNG---CVAARMRARRPDLSFCLVDQDRR-------A 83
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + I P+ + D +
Sbjct: 84 LDAAGSTWHTHCADICNIPEPNGSFDALLC 113
>gi|289165160|ref|YP_003455298.1| methyltransferase [Legionella longbeachae NSW150]
gi|288858333|emb|CBJ12201.1| putative methyltransferase [Legionella longbeachae NSW150]
Length = 261
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 15/132 (11%), Positives = 41/132 (31%), Gaps = 26/132 (19%)
Query: 48 SSTVEDFW--IRHVEDSLR-------VFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSI 96
+ + W + + S + + +P+ +D+G G G + + +
Sbjct: 3 INEPKVLWDPEHYFKHSATQFGHATGLLKNYPFKGDESILDVGCGDGKITAAIANLVPN- 61
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCDVISARALADLDT 155
G V ++ F + Q T F + + ++ D+I + +
Sbjct: 62 --GKVIGLDKDITTIKFAQAKFQPTNHNNLSFLHGDVTQISEL-GKFDLIVS--FS---- 112
Query: 156 LLEYSFPWLYQK 167
++ +
Sbjct: 113 ----CLHFVKDQ 120
>gi|229549321|ref|ZP_04438046.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterococcus faecalis ATCC 29200]
gi|255972030|ref|ZP_05422616.1| modification methylase HemK [Enterococcus faecalis T1]
gi|256957797|ref|ZP_05561968.1| modification methylase HemK [Enterococcus faecalis DS5]
gi|257079735|ref|ZP_05574096.1| modification methylase HemK [Enterococcus faecalis JH1]
gi|294779687|ref|ZP_06745077.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecalis PC1.1]
gi|300861227|ref|ZP_07107314.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecalis TUSoD Ef11]
gi|307270730|ref|ZP_07552021.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX4248]
gi|312953587|ref|ZP_07772424.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0102]
gi|229305558|gb|EEN71554.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterococcus faecalis ATCC 29200]
gi|255963048|gb|EET95524.1| modification methylase HemK [Enterococcus faecalis T1]
gi|256948293|gb|EEU64925.1| modification methylase HemK [Enterococcus faecalis DS5]
gi|256987765|gb|EEU75067.1| modification methylase HemK [Enterococcus faecalis JH1]
gi|294453241|gb|EFG21653.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecalis PC1.1]
gi|300850266|gb|EFK78016.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecalis TUSoD Ef11]
gi|306513040|gb|EFM81681.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX4248]
gi|310628425|gb|EFQ11708.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0102]
gi|315035853|gb|EFT47785.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0027]
gi|315151854|gb|EFT95870.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0031]
gi|323481493|gb|ADX80932.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecalis 62]
gi|327535787|gb|AEA94621.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
OG1RF]
gi|329578087|gb|EGG59500.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX1467]
Length = 277
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 12/92 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++L E K + + Q A + +
Sbjct: 139 IAIDLSE---KALTVAKQNAQALGAGIEFYHG 167
>gi|225174523|ref|ZP_03728522.1| Methyltransferase type 11 [Dethiobacter alkaliphilus AHT 1]
gi|225170308|gb|EEG79103.1| Methyltransferase type 11 [Dethiobacter alkaliphilus AHT 1]
Length = 241
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P + +D+G G G I + G V +++ FL ++
Sbjct: 26 LSLIPVLPEKPLILDIGCGSGMQTIELA----RATNGTVTGVDNYQ---PFLDVLLANAK 78
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
K + + P T D+I +
Sbjct: 79 HNVKTVNASMDQLPFDKGTFDLIWS 103
>gi|195157612|ref|XP_002019690.1| GL12077 [Drosophila persimilis]
gi|194116281|gb|EDW38324.1| GL12077 [Drosophila persimilis]
Length = 514
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI S + I++ + + V + ++ R
Sbjct: 242 GKTVLDVGCGTG----ILSIFASQAGASRIVGIDNSEIVYTAMDIVRKNNVKNVELVKGR 297
Query: 132 IQEAPQMITTCDVISA 147
+++ D+I +
Sbjct: 298 LEDTELPEAKYDIIIS 313
>gi|53718654|ref|YP_107640.1| putative biotin biosyntehsis related protein [Burkholderia
pseudomallei K96243]
gi|52209068|emb|CAH35008.1| putative biotin biosyntehsis related protein [Burkholderia
pseudomallei K96243]
Length = 257
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 48 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 103
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 104 AAERLPFADASFDWIVSR 121
>gi|320528066|ref|ZP_08029232.1| methyltransferase domain protein [Solobacterium moorei F0204]
gi|320131692|gb|EFW24256.1| methyltransferase domain protein [Solobacterium moorei F0204]
Length = 253
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 9/97 (9%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK-ASFLR 115
R + + + + P +D+G G G I + + L+ I+ K+ ASF +
Sbjct: 71 RQIIEGIAEYVKVPAGGSCLDVGCGSGALTIACAKRNPD---ALITGIDRWGKEYASFSQ 127
Query: 116 YVVQKTA-----ARGKVFACRIQEAPQMITTCDVISA 147
+ ++ A + + D +++
Sbjct: 128 ELCERNAMAEGVENTRFIHGDAVSLNFPDESFDAVTS 164
>gi|284164313|ref|YP_003402592.1| methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
gi|284013968|gb|ADB59919.1| Methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
Length = 258
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 9/102 (8%)
Query: 60 EDSLRVFQLH------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
DS H +DLGSG G + ++ + G V ++ + + +
Sbjct: 56 IDSFAGVGYHFDLADPQEGEDVLDLGSGSGMDAFVAALHVGD--AGSVTGLDMTDGQLAK 113
Query: 114 LRYVVQKTAARGKVF-ACRIQEAPQMITTCDVISARALADLD 154
R + + F I++ P + DV+ + + +L
Sbjct: 114 ARRLRDEAGMENVSFEQGYIEDLPFADESFDVVVSNGVINLS 155
>gi|242041581|ref|XP_002468185.1| hypothetical protein SORBIDRAFT_01g041300 [Sorghum bicolor]
gi|241922039|gb|EER95183.1| hypothetical protein SORBIDRAFT_01g041300 [Sorghum bicolor]
Length = 358
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARGKVFAC 130
++LGSG G G++ + +S V + + +K L +T + +
Sbjct: 185 SKKVLELGSGYGLAGLVVA---ASTNADEVVISDGNPQKNITLNAKTFGETKVKSMILHW 241
Query: 131 RIQEAPQMITTCDVISA 147
++A +++ T D+I A
Sbjct: 242 DKEQASEILNTFDIIVA 258
>gi|258404841|ref|YP_003197583.1| methyltransferase small [Desulfohalobium retbaense DSM 5692]
gi|257797068|gb|ACV68005.1| methyltransferase small [Desulfohalobium retbaense DSM 5692]
Length = 249
Score = 37.4 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 10/92 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L F P + +DLG+G G G +++ I+ V + + + R +
Sbjct: 29 LACFSPAPTGTQVLDLGAGCGVVGFGLALRQPGIQLTGV---DCNPEMVAAARENAARLG 85
Query: 123 ARGKVFACRIQEA-------PQMITTCDVISA 147
+ A P + ++
Sbjct: 86 LEQRAVFVEADAALVRDTATPLDPESFPLVVC 117
>gi|325108316|ref|YP_004269384.1| methyltransferase regulatory domain-containing protein
[Planctomyces brasiliensis DSM 5305]
gi|324968584|gb|ADY59362.1| Methyltransferase regulatory domain-containing protein
[Planctomyces brasiliensis DSM 5305]
Length = 532
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
P S +++G G I ++ L E +L ++ + VV + ++
Sbjct: 50 PASSRVLEIGCAAGGNLIPMAVSLPGSEFVGFDL---SRRELEDGQNVVDAIGLKNVRLE 106
Query: 129 ACRIQEAPQMITTCDVISA 147
I + + T D I
Sbjct: 107 HADILDFHRPGETFDYIVC 125
>gi|291616166|ref|YP_003518908.1| RsmC [Pantoea ananatis LMG 20103]
gi|291151196|gb|ADD75780.1| RsmC [Pantoea ananatis LMG 20103]
Length = 374
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + P+ +D+G G G +I + + + L + + +
Sbjct: 218 LLLSTFTPHTKGKVLDIGCGAG---VIAASLPAHSPKVRLWLCDVHAAAIEASKATLAAN 274
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + + D+I +
Sbjct: 275 GLEGEVFASNV--FSDVTGRFDMIIS 298
>gi|323528009|ref|YP_004230161.1| precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
[Burkholderia sp. CCGE1001]
gi|323385011|gb|ADX57101.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia sp. CCGE1001]
Length = 422
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE+ ++ F+ +
Sbjct: 239 ITLARLAPTPGQLLWDVGAGSGSIGIEWMRAHPACRAIA---IEAHAERQGFIGHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + + D +
Sbjct: 296 GVPGLQLVAGRAPQALEGLPAPDAV 320
>gi|300777693|ref|ZP_07087551.1| protein-(glutamine-N5) methyltransferase [Chryseobacterium gleum
ATCC 35910]
gi|300503203|gb|EFK34343.1| protein-(glutamine-N5) methyltransferase [Chryseobacterium gleum
ATCC 35910]
Length = 282
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 10/95 (10%), Positives = 30/95 (31%), Gaps = 8/95 (8%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
+ IR +++S + +D+G+G G ++ ++ ++ K +
Sbjct: 103 EIAIREIKNS----KFKDQDIKILDIGTGSGIISLVLKKYFPEAH---ISSVDFSEKALN 155
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + D+I +
Sbjct: 156 TAKRNAEYHQLEINFIHADY-LNYEPGEDYDIIIS 189
>gi|170691943|ref|ZP_02883107.1| Methyltransferase type 11 [Burkholderia graminis C4D1M]
gi|170143227|gb|EDT11391.1| Methyltransferase type 11 [Burkholderia graminis C4D1M]
Length = 250
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 23/78 (29%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +D+G G G + V + + + ++ +
Sbjct: 42 GATVLDMGCGAGHASFAVA-----PHAQEVVAYDIAAPMLAIVESAAKERGLANIRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
++ P T D + +R
Sbjct: 97 AAEKLPFGDHTFDWVVSR 114
>gi|170583563|ref|XP_001896639.1| hypothetical protein [Brugia malayi]
gi|158596116|gb|EDP34517.1| conserved hypothetical protein [Brugia malayi]
Length = 350
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+GSG G I S+ + V IE N A+ + +V+
Sbjct: 60 KHLFKDKVVMDVGSGTG----ILSMFAAKAGARRVIAIEFSNM-ATQSKQIVKDNDLENI 114
Query: 126 -KVFACRIQEAPQM---ITTCDVISA 147
+V ++++ ++ I DVI +
Sbjct: 115 IEVIHGKVEDVKELPDGIEKVDVIIS 140
>gi|146309099|ref|YP_001189564.1| biotin biosynthesis protein BioC [Pseudomonas mendocina ymp]
gi|145577300|gb|ABP86832.1| pimeloyl-CoA biosynthesis protein BioC [Pseudomonas mendocina ymp]
Length = 267
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 13/98 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L P W+DLG G GF + + S EG V++ E LR+ +
Sbjct: 42 LARLPASLQPQRWLDLGCGTGFFTRALAERYPSGEGVAVDIAEGM------LRHA-RPLG 94
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A + P T+ D++ + L L++
Sbjct: 95 GATHFIAGDAEALPLQCTSADLL----FSSLA--LQWC 126
>gi|194900938|ref|XP_001980012.1| GG20792 [Drosophila erecta]
gi|190651715|gb|EDV48970.1| GG20792 [Drosophila erecta]
Length = 517
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI + V I++ + + + + + ++ R
Sbjct: 245 GKTVLDVGCGTG----ILSIFAAKAGAARVVGIDNSDIVYTAMDIIRKNKVENVELIKGR 300
Query: 132 IQEAPQMITTCDVISA 147
+++ D+I +
Sbjct: 301 LEDTDLPEAKYDIIIS 316
>gi|124024956|ref|YP_001014072.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. NATL1A]
gi|123960024|gb|ABM74807.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. NATL1A]
Length = 233
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 26/88 (29%), Gaps = 9/88 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ D G G G I + + ++L + + + ++ R
Sbjct: 65 DKSFCDAGCGVGSLSIPLA----KLGAKSIHLSDISEAMINETKSRAKEEGLDFNKLNFR 120
Query: 132 IQEAPQMITTCDVISARALADLDTLLEY 159
+ + + + + LD + Y
Sbjct: 121 TSDLENLKGSFNTVVC-----LDVFIHY 143
>gi|134281081|ref|ZP_01767790.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei 305]
gi|167901764|ref|ZP_02488969.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
pseudomallei NCTC 13177]
gi|254181388|ref|ZP_04887985.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
1655]
gi|134247387|gb|EBA47472.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei 305]
gi|184211926|gb|EDU08969.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
1655]
Length = 251
Score = 37.4 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|261339036|ref|ZP_05966894.1| hypothetical protein ENTCAN_05245 [Enterobacter cancerogenus ATCC
35316]
gi|288318871|gb|EFC57809.1| ribosomal RNA small subunit methyltransferase C [Enterobacter
cancerogenus ATCC 35316]
Length = 342
Score = 37.4 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + +
Sbjct: 167 LT-IKTLPGVFSRDYLDVGSKLLLSTLTPHTKGKVLDVGCGAGVLATVLASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+V A + + D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGFEGEVIASNV--FSDVTGRFDMIIS 267
>gi|327396406|dbj|BAK13828.1| ribosomal RNA small subunit methyltransferase C RsmC [Pantoea
ananatis AJ13355]
Length = 367
Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + P+ +D+G G G +I + + + L + + +
Sbjct: 211 LLLSTFTPHTKGKVLDIGCGAG---VIAASLPAHSPKVRLWLCDVHAAAIEASKATLAAN 267
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + + D+I +
Sbjct: 268 GLEGEVFASNV--FSDVTGRFDMIIS 291
>gi|167910004|ref|ZP_02497095.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
pseudomallei 112]
Length = 251
Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|312074706|ref|XP_003140090.1| hypothetical protein LOAG_04505 [Loa loa]
gi|307764748|gb|EFO23982.1| hypothetical protein LOAG_04505 [Loa loa]
Length = 339
Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+GSG G I S+ + V IE N A+ + +V+
Sbjct: 60 KHLFKDKVVMDVGSGTG----ILSMFAARAGARKVIAIEFSNM-ATQSKQIVKDNNLENV 114
Query: 126 -KVFACRIQEAPQM---ITTCDVISA 147
+V ++++ ++ I DVI +
Sbjct: 115 IEVIHGKVEDVKELPDGIEKVDVIIS 140
>gi|217419661|ref|ZP_03451167.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei 576]
gi|217396965|gb|EEC36981.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei 576]
Length = 251
Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|167900270|ref|ZP_02487671.1| putative biotin biosyntehsis related protein [Burkholderia
pseudomallei 7894]
Length = 251
Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|254190788|ref|ZP_04897295.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
Pasteur 52237]
gi|157938463|gb|EDO94133.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
Pasteur 52237]
Length = 251
Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|134296609|ref|YP_001120344.1| type 11 methyltransferase [Burkholderia vietnamiensis G4]
gi|134139766|gb|ABO55509.1| Methyltransferase type 11 [Burkholderia vietnamiensis G4]
Length = 250
Score = 37.4 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 32/111 (28%), Gaps = 17/111 (15%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D L + +DLG G G + V + + + +
Sbjct: 30 LDMLAAAVRATPAAAVLDLGCGAGHASFAVA-----PHVRDVVAYDLAAPMLATVDAAAR 84
Query: 120 KTAA-RGKVFACRIQEAPQMITTCDVISAR-----------ALADLDTLLE 158
+ + + P + D + +R ALAD+ +L+
Sbjct: 85 ERGLANVRTQQGPAERLPFEAGSFDWVISRMSAHHWHDVPAALADMRRVLK 135
>gi|262163962|ref|ZP_06031701.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus VM223]
gi|262027490|gb|EEY46156.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus VM223]
Length = 340
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 9/105 (8%)
Query: 45 LVSSSTVEDFWIRHVED--SLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
L ++ + D S + P ID+G G G G + + +IE +
Sbjct: 172 LT-IRSLPGVFSHGEFDLGSRLLLDTLPTLSGKVIDIGCGAGVLGCVMAKLNPNIE---L 227
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ + + + RG V+ + D I
Sbjct: 228 EMTDISALAIRSSQETLLANHLRGTVYPSDM--FSDTKHKYDYIV 270
>gi|222085790|ref|YP_002544320.1| protein-L-isoaspartate O-methyltransferase [Agrobacterium
radiobacter K84]
gi|221723238|gb|ACM26394.1| protein-L-isoaspartate O-methyltransferase [Agrobacterium
radiobacter K84]
Length = 217
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 34/107 (31%), Gaps = 14/107 (13%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
D +R + SL++ +++G+G GF + + V ++ +
Sbjct: 67 DLVVR-ILHSLKIKP----GHRVLEIGTGSGFTAAVMARI-----VERVLTVDRYKTLTT 116
Query: 113 FLRYVVQKTAARGKVFACRIQEAP-QMITTCD--VISARALADLDTL 156
+ + R + T D V+++ A +
Sbjct: 117 AAQQRMDTLGLRNVIIRQADGSVGLPGEGTFDRIVVTS-AFTAMPRF 162
>gi|209551103|ref|YP_002283020.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|226725557|sp|B5ZRR7|UBIG_RHILW RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|209536859|gb|ACI56794.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 252
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + K + + A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GATVTGADPSEKNIGIASTHAKASGVSVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+E T D++
Sbjct: 119 TAEELADAGETFDIV 133
>gi|167854534|ref|ZP_02477315.1| hypothetical protein HPS_02109 [Haemophilus parasuis 29755]
gi|167854289|gb|EDS25522.1| hypothetical protein HPS_02109 [Haemophilus parasuis 29755]
Length = 170
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 21/103 (20%)
Query: 38 KWSKKINLVSSS------TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
KW KK + E+ + R D +++ +D+GSG G I +
Sbjct: 29 KWDKK----AVRFAETFVEKENSYTRQFLDKMKIEP----TDSVLDIGSGPGTLAIPLAR 80
Query: 92 QLSSIEGGLVNLIESKNKK-----ASFLRYVVQKTAARGKVFA 129
+ + L+ ++ +FL+ + +G+ +
Sbjct: 81 LCKQVYAFYIYLLNRLYQRGIQAELTFLQG--ETGGLQGETYQ 121
>gi|153003698|ref|YP_001378023.1| methyltransferase small [Anaeromyxobacter sp. Fw109-5]
gi|152027271|gb|ABS25039.1| methyltransferase small [Anaeromyxobacter sp. Fw109-5]
Length = 414
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 27/84 (32%), Gaps = 5/84 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ I++G+G G ++ + G V + + + R +
Sbjct: 226 AAAEWPVAGKRVIEVGTGTGVLALVLARA-----GARVIATDVEPAAVACARENAARLGL 280
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
+V R P + D++ +
Sbjct: 281 AERVEVVRADLFPDGVGPADLVVS 304
>gi|108707128|gb|ABF94923.1| expressed protein [Oryza sativa Japonica Group]
Length = 348
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-------QKTAAR 124
++LGSG G G+ + +S + V + + + +++ + +T +
Sbjct: 170 SKKVLELGSGYGLAGLAIA---ASTDADEVVISDGNPQVVGYIQQNISINTETFGQTKVK 226
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
V +A ++I++ D+I A
Sbjct: 227 SMVLHWDAGQASEIISSFDIIVA 249
>gi|90579978|ref|ZP_01235786.1| putative adenine-specific methylase [Vibrio angustum S14]
gi|90438863|gb|EAS64046.1| putative adenine-specific methylase [Vibrio angustum S14]
Length = 310
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L+ P+ +DL +G G GI + E V++++ + + + +V
Sbjct: 129 LNQEPTRIMDLCTGSGCIGIACAHMFPEAE---VDIVDISPEALAVAEQNIADHGLEQQV 185
Query: 128 FACRIQEAPQ-MITTCDVISA 147
R D I +
Sbjct: 186 IPLRSDLLRDVPKDKYDFIVS 206
>gi|73668710|ref|YP_304725.1| ribosomal RNA adenine dimethylase [Methanosarcina barkeri str.
Fusaro]
gi|72395872|gb|AAZ70145.1| ribosomal RNA adenine dimethylase [Methanosarcina barkeri str.
Fusaro]
Length = 274
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FAC 130
S +D+GSG G I + + V +E + L+ ++
Sbjct: 61 DSKVLDIGSGPGTLTIPLAGMVKH-----VTAVEPSDGMLYCLKENIKAMGLNNVSWIQK 115
Query: 131 RIQEA--PQMITTCDVISA 147
+ ++ + DV+ A
Sbjct: 116 KWEDVDIKDLDAPYDVVVA 134
>gi|115533050|ref|NP_001041045.1| COenzyme Q (ubiquinone) biosynthesis family member (coq-3)
[Caenorhabditis elegans]
gi|3881187|emb|CAB16512.1| C. elegans protein Y57G11C.11a, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 268
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 41/136 (30%), Gaps = 38/136 (27%)
Query: 58 HVEDSLRVFQL-----------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
H SL ++ P +D+GSGGG I + G V I++
Sbjct: 51 HALHSLNRIRVPWIVDNVRKSDQKAPPRLVDVGSGGGLLSIPLA-----RSGFDVTGIDA 105
Query: 107 KNKKASFLRYVVQKTAA-------RGKVFACRIQEA---PQMITTCDVISARA------L 150
+ + R + +++ P + D + A +
Sbjct: 106 TKQAVEAANQSLTAKPLQIAGISKRLRFEHTSVEDFCQKPHNKSAYDAVV--ASEIVEHV 163
Query: 151 ADLDT----LLEYSFP 162
ADL L E + P
Sbjct: 164 ADLPGFIGCLAELARP 179
>gi|84516321|ref|ZP_01003681.1| modification methylase, HemK family [Loktanella vestfoldensis
SKA53]
gi|84510017|gb|EAQ06474.1| modification methylase, HemK family [Loktanella vestfoldensis
SKA53]
Length = 277
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ L + +DLG+G G + G V+L ++ A+ R
Sbjct: 97 IVTAALADPFAHVLDLGTGSGCILLSLLAARPQATGLGVDLSDAALAVAAQNRSA---LG 153
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ R + + D+I +
Sbjct: 154 LDQRATLVRSDWFTAVTGSFDLIVS 178
>gi|150389783|ref|YP_001319832.1| methyltransferase type 11 [Alkaliphilus metalliredigens QYMF]
gi|149949645|gb|ABR48173.1| Methyltransferase type 11 [Alkaliphilus metalliredigens QYMF]
Length = 251
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 63 LRVFQ---LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L++F+ + +D+G+G GF ++ + EG V I+ +
Sbjct: 35 LQLFKKYGMTERKLKVLDVGTGSGFFAVLLA-----QEGHDVTGIDYTPNMLKHAEETAR 89
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISAR 148
K + + Q + D+I R
Sbjct: 90 KFNVKLDLRQMDAQNLEFEDESFDLIVTR 118
>gi|76799622|ref|ZP_00781739.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
agalactiae 18RS21]
gi|76585028|gb|EAO61669.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
agalactiae 18RS21]
Length = 332
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 16/104 (15%)
Query: 55 WIRHVEDSLRVFQLHP-----------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ +H DSL QL+ +D+G G G I + + + + L
Sbjct: 74 YFKHENDSLEQAQLNKVHHILNKLNAQPGGKLLDIGCGWGTLIITAAKEY-GLNATGITL 132
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
E +ASF+ +++ KV I++ + T D I++
Sbjct: 133 SEE---QASFITKRIKEEGLENKVTVL-IKDYRDIRETYDYITS 172
>gi|76811425|ref|YP_332638.1| UbiE/COQ5 family methlytransferase [Burkholderia pseudomallei
1710b]
gi|126452650|ref|YP_001065354.1| UbiE/COQ5 family methlytransferase [Burkholderia pseudomallei
1106a]
gi|167737622|ref|ZP_02410396.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
pseudomallei 14]
gi|167814756|ref|ZP_02446436.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
pseudomallei 91]
gi|167851428|ref|ZP_02476936.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
pseudomallei B7210]
gi|242314588|ref|ZP_04813604.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
1106b]
gi|254258817|ref|ZP_04949871.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
1710a]
gi|254298286|ref|ZP_04965738.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
406e]
gi|76580878|gb|ABA50353.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
1710b]
gi|126226292|gb|ABN89832.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
1106a]
gi|157808170|gb|EDO85340.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
406e]
gi|242137827|gb|EES24229.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
1106b]
gi|254217506|gb|EET06890.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
1710a]
Length = 251
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|22537887|ref|NP_688738.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
agalactiae 2603V/R]
gi|77408801|ref|ZP_00785530.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
agalactiae COH1]
gi|22534784|gb|AAN00611.1|AE014271_6 cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
agalactiae 2603V/R]
gi|77172582|gb|EAO75722.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptococcus
agalactiae COH1]
Length = 396
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 16/104 (15%)
Query: 55 WIRHVEDSLRVFQLHP-----------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ +H DSL QL+ +D+G G G I + + + + L
Sbjct: 138 YFKHENDSLEQAQLNKVHHILNKLNAQPGGKLLDIGCGWGTLIITAAKEY-GLNATGITL 196
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
E +ASF+ +++ KV I++ + T D I++
Sbjct: 197 SEE---QASFITKRIKEEGLENKVTVL-IKDYRDIRETYDYITS 236
>gi|299140951|ref|ZP_07034089.1| SmtA protein [Prevotella oris C735]
gi|298577917|gb|EFI49785.1| SmtA protein [Prevotella oris C735]
Length = 231
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + + + +D+G+G G ++ + + + +++ E R +
Sbjct: 25 DGVLLGAWARGGNRVLDIGTGTGVIALMLAQRFPEAKITAIDIAE------EACRQAKEN 78
Query: 121 TAARGKVFACRIQEAP----QMITTCDVISA 147
+A ++++ + D I +
Sbjct: 79 VSASPFAHQVQVEQISLQEFESAERFDCIVS 109
>gi|298368399|ref|ZP_06979717.1| methyltransferase domain protein [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282402|gb|EFI23889.1| methyltransferase domain protein [Neisseria sp. oral taxon 014 str.
F0314]
Length = 335
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D + L+P+ D+G+G G + + L+ + I++ K + +
Sbjct: 144 LDLIAQAPLNPHIQTAFDIGTGSG----VIAAILAKRGIPEITAIDTNPKAIACATANLA 199
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ +V + P+ D+I
Sbjct: 200 RLGLDKQVAVQAVDLFPE--GRADLIVC 225
>gi|218672596|ref|ZP_03522265.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli GR56]
Length = 146
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + K + + A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GASVTGADPSEKNIGIASTHAKASGVSVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+E T D++
Sbjct: 119 TAEELADAGETFDIV 133
>gi|190894626|ref|YP_001984919.1| putative methyltransferase [Rhizobium etli CIAT 652]
gi|190700287|gb|ACE94369.1| putative methyltransferase protein [Rhizobium etli CIAT 652]
Length = 244
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF ++++ G V I+S + R+ A
Sbjct: 47 VVPDDLAGRSVLDIGCNAGF----YTLEMKRRNAGRVLGIDSDPRYLEQARFAADHFALD 102
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + E Q+ T D++ + L P L
Sbjct: 103 IEFRQMSVYEVAQLGETFDLVLF-----MGVLYHLRHPLLA 138
>gi|190893594|ref|YP_001980136.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli CIAT
652]
gi|226725556|sp|B3PP83|UBIG_RHIE6 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|190698873|gb|ACE92958.1| 3-demethylubiquinone-9 3-methyltransferase protein [Rhizobium etli
CIAT 652]
Length = 248
Score = 37.4 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + +K + + A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GASVVGADPSDKNIGIASTHAKASGVPVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+E + T D++
Sbjct: 119 TAEELAEAGETFDIV 133
>gi|269791949|ref|YP_003316853.1| protein-L-isoaspartate(D-aspartate)O-methyltransferase
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099584|gb|ACZ18571.1| Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 223
Score = 37.4 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +++GSG G+ + + G V +E A + R V+ +
Sbjct: 88 PVRVLEVGSGCGYQCAVLARM-----GCSVVGVERIRDLADWSREVLGGLGMEVSIIHGD 142
Query: 132 IQEAPQMITTCDVIS 146
+ + D I
Sbjct: 143 GRALGGDLGPFDGIV 157
>gi|302337291|ref|YP_003802497.1| methyltransferase type 11 [Spirochaeta smaragdinae DSM 11293]
gi|301634476|gb|ADK79903.1| Methyltransferase type 11 [Spirochaeta smaragdinae DSM 11293]
Length = 187
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 13/106 (12%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
NL + + + + S+ D+GSGGGF + G V
Sbjct: 12 NLRAKKEAAEIFT---------YLPLRQGSVVADIGSGGGF--FAVEFARKIGDTGEVYA 60
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC--DVISA 147
++ K FL + ++ A +E ++ D+I +
Sbjct: 61 VDISGKNLRFLMDYARNKGMESRIIAVLGEEHSCLLPEASQDLIFS 106
>gi|294508496|ref|YP_003572554.1| methyltransferase [Salinibacter ruber M8]
gi|294344825|emb|CBH25603.1| methyltransferase [Salinibacter ruber M8]
Length = 713
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIIT-SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+DLGSG G + V+ E KA R F
Sbjct: 517 GERVLDLGSGAGMDAFVARRTVGPDGHVHGVDFAEEMVAKA---RANADTLDYDNVTFEV 573
Query: 130 CRIQEAPQMITTCDVISA 147
I+ P DV+ +
Sbjct: 574 GDIEALPVESGAFDVVLS 591
>gi|156936955|ref|YP_001434751.1| methyltransferase small [Ignicoccus hospitalis KIN4/I]
gi|156565939|gb|ABU81344.1| methyltransferase small [Ignicoccus hospitalis KIN4/I]
Length = 194
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L F P +D+G G G GI+ + ++E V +++ + +
Sbjct: 46 LAEFMEIPKEGKVLDVGCGYGVLGILMAKLNPNLE---VYMVDVNPVAVDAAKRNAELNG 102
Query: 123 ARGKVFACRIQEAPQMITTCDV--ISA 147
R V + E ++ D I +
Sbjct: 103 VRVTVLQGNLYEPTDLLGIKDFSTIVS 129
>gi|110677790|ref|YP_680797.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter
denitrificans OCh 114]
gi|123172998|sp|Q16D32|UBIG_ROSDO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|109453906|gb|ABG30111.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter
denitrificans OCh 114]
Length = 248
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Query: 65 VFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P+ +D+G GGG + + V ++ + R +++
Sbjct: 56 LASPEPFKGLRILDIGCGGGLLAEPMARLGAD-----VVGADAAERNIPVARVHAEQSGL 110
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ DV+
Sbjct: 111 TIDYRHTTAEALAAEGEQFDVV 132
>gi|68250203|ref|YP_249315.1| hypothetical protein NTHI1897 [Haemophilus influenzae 86-028NP]
gi|68058402|gb|AAX88655.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 268
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 13/93 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKLGLHNLTTFHK 114
Query: 131 RIQEAPQMITTCDVISARA-----LADLDTLLE 158
+ + DV+ A + DLD ++E
Sbjct: 115 SWTDNWDDVPQADVVL--ASHSTLVDDLDDMIE 145
>gi|315179199|gb|ADT86113.1| 16S RNA G1207 methylase RsmC [Vibrio furnissii NCTC 11218]
Length = 340
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 8/80 (10%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
D R + D+L P +D G G G G + ++ +I + + +
Sbjct: 187 DMGSRLLLDTL-----PPLQGKVLDFGCGAGVLGGVMAMLYPNI---ALEMCDISALAIR 238
Query: 113 FLRYVVQKTAARGKVFACRI 132
+ + G+VFA +
Sbjct: 239 SSQETLAANGLSGRVFASDV 258
>gi|260771195|ref|ZP_05880122.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
CIP 102972]
gi|260613792|gb|EEX38984.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
CIP 102972]
Length = 340
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 8/80 (10%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
D R + D+L P +D G G G G + ++ +I + + +
Sbjct: 187 DMGSRLLLDTL-----PPLQGKVLDFGCGAGVLGGVMAMLYPNI---ALEMCDISALAIR 238
Query: 113 FLRYVVQKTAARGKVFACRI 132
+ + G+VFA +
Sbjct: 239 SSQETLAANGLSGRVFASDV 258
>gi|229139235|ref|ZP_04267810.1| hypothetical protein bcere0013_23470 [Bacillus cereus BDRD-ST26]
gi|228644294|gb|EEL00551.1| hypothetical protein bcere0013_23470 [Bacillus cereus BDRD-ST26]
Length = 158
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFAC 130
+DLGSG G I + IQ +S V+L++S K L+ ++ K
Sbjct: 15 VLDLGSGVGRNSIPIAQKIQNASGTVTCVDLLDSALTK---LQTYSKEYGVINNMKTEQA 71
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 72 AIENYYIQRNTYDYIV--AVSSLE 93
>gi|226508404|ref|NP_001148683.1| protein arginine N-methyltransferase 6 [Zea mays]
gi|195621380|gb|ACG32520.1| protein arginine N-methyltransferase 6 [Zea mays]
gi|223944945|gb|ACN26556.1| unknown [Zea mays]
Length = 387
Score = 37.4 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVF 128
+ +D+G G G I S+ + V +E+ R +V+ V
Sbjct: 80 EGKVVLDVGCGTG----ILSVFCARAGAKRVYAVEACEIVVQA-REIVKANNLTDQIVVI 134
Query: 129 ACRIQEAPQMITTCDVISA 147
R+++ + DVI +
Sbjct: 135 HGRVEDV-DLEEKVDVIIS 152
>gi|324112056|gb|EGC06034.1| methyltransferase small domain-containing protein [Escherichia
fergusonii B253]
Length = 343
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 39 WSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSI 91
W + N L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 159 WGE-YNVDGLT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFAR 216
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I + L + R + G+VFA + ++ D+I +
Sbjct: 217 HSPKIR---LTLCDVSAPAVEASRATLAANGIEGEVFASNV--FSEVKGRFDMIIS 267
>gi|229060571|ref|ZP_04197931.1| Methyltransferase type 11 [Bacillus cereus AH603]
gi|228718745|gb|EEL70370.1| Methyltransferase type 11 [Bacillus cereus AH603]
Length = 271
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+ + +D+ +GGG + + V ++ K + ++ F A
Sbjct: 51 HNTRLLDIATGGGHVANLLAPMFKE-----VVALDLTEKMLEKAKGFIEGNGHENVSFVA 105
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D I+ R
Sbjct: 106 GNAENLPFADESFDTITCR 124
>gi|119496549|ref|XP_001265048.1| protein arginine n-methyltransferase 1 [Neosartorya fischeri NRRL
181]
gi|119413210|gb|EAW23151.1| protein arginine n-methyltransferase 1 [Neosartorya fischeri NRRL
181]
Length = 352
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 48 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 103
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V + + + +++E D+I +
Sbjct: 104 EKAREI-VAVNGLSDKITLLQGKMEEVQLPFPAVDIIIS 141
>gi|67078245|ref|YP_245865.1| methyltransferase [Bacillus cereus E33L]
gi|66970551|gb|AAY60527.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 225
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK-------KASFLR 115
L + Q +D+G+G G +I +S G V + +K KA
Sbjct: 68 LSLAQAKSGDE-LLDVGTGRGL----LAIS-ASQRGCKVTATDVWSKWDLGGNGKAKLQA 121
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+V ++ A + +E P + DV+ +
Sbjct: 122 NMVAESVAEIDIVDADARELPFSDESFDVVVS 153
>gi|170681708|ref|YP_001746825.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
SMS-3-5]
gi|226712950|sp|B1LEH4|RSMC_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|170519426|gb|ACB17604.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
SMS-3-5]
Length = 343
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 39 WSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSI 91
W + N L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 159 WGE-YNVDGLT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFAR 216
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I + L + R + G+VFA + ++ D+I +
Sbjct: 217 HSPKIR---LTLCDVSAPAVEASRATLAANGIEGEVFASNV--FSEVKGRFDMIIS 267
>gi|167918034|ref|ZP_02505125.1| putative biotin biosyntehsis related protein [Burkholderia
pseudomallei BCC215]
Length = 251
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|107022748|ref|YP_621075.1| precorrin-6y C5,15-methyltransferase, subunit CbiE [Burkholderia
cenocepacia AU 1054]
gi|116689697|ref|YP_835320.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia cenocepacia HI2424]
gi|105892937|gb|ABF76102.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia cenocepacia AU 1054]
gi|116647786|gb|ABK08427.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia cenocepacia HI2424]
Length = 461
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI S + IE+ ++ F+ +
Sbjct: 277 MTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCQAIA---IEAHAERQRFIEHNRDTL 333
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 334 GVPGLQLVAGRAPDALAGLAAPDAI 358
>gi|91774053|ref|YP_566745.1| putative methyltransferase [Methanococcoides burtonii DSM 6242]
gi|91713068|gb|ABE52995.1| tRNA (1-methyladenosine) methyltransferase [Methanococcoides
burtonii DSM 6242]
Length = 250
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D G+G G I ++ L SI V E ++ A R +++
Sbjct: 93 LNKNDTVLDAGTGSG----ILAMYLGSI-AKRVLSFEVRDDFAEVARENIRRAGLDNVEV 147
Query: 129 ACR--IQEAPQMITTCDVIS 146
C + E ++ D+++
Sbjct: 148 RCGNIVDEVKELDEKFDIVT 167
>gi|254196231|ref|ZP_04902655.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei S13]
gi|169652974|gb|EDS85667.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei S13]
Length = 251
Score = 37.4 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|293365627|ref|ZP_06612336.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
gi|291315995|gb|EFE56439.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
Length = 196
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ R ++ +F
Sbjct: 55 VNEGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINNRALDLARQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 111 QSNI--YEQIEGKFDHVISNPPIRA 133
>gi|258623082|ref|ZP_05718095.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
VM573]
gi|258584695|gb|EEW09431.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
VM573]
Length = 340
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 9/105 (8%)
Query: 45 LVSSSTVEDFWIRHVED--SLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
L ++ + D S + P ID+G G G G + + +IE +
Sbjct: 172 LT-IRSLPGVFSHGEFDLGSRLLLDTLPTLSGKVIDIGCGAGVLGCVMAKLNPNIE---L 227
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ + + + RG V+ + D I
Sbjct: 228 EMTDISALAIRSSQETLLANHLRGTVYPSDM--LSDTKHKYDYIV 270
>gi|89097498|ref|ZP_01170387.1| Ubiquinone/menaquinone biosynthesis methyltransferase UBIE
[Bacillus sp. NRRL B-14911]
gi|89087794|gb|EAR66906.1| Ubiquinone/menaquinone biosynthesis methyltransferase UBIE
[Bacillus sp. NRRL B-14911]
Length = 245
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +++G G G + L IE A + + + G V
Sbjct: 45 PSGKEILEIGCGDG----SYAASLLEAGCASYTGIEGSQNMARLAQK--RMGNSNGTVIH 98
Query: 130 CRIQEAPQMITTCDVISARAL 150
RI++ D++ +R +
Sbjct: 99 SRIEDYEWEQEKYDLVLSRLV 119
>gi|296165798|ref|ZP_06848304.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898852|gb|EFG78352.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 218
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 10/95 (10%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
W R L +D+G G G+ I + GG V I+ S
Sbjct: 41 RMWDR-----LVGLSGAEPGHRVLDVGCGTGY--FTRRIARAVQPGGSVVGIDPSQ---S 90
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ Y ++ A ++ P + D++ +
Sbjct: 91 MVDYAARRGPANSTFQVAAAEDLPFADQSFDLVVS 125
>gi|172058269|ref|YP_001814729.1| tRNA (guanine-N(7)-)-methyltransferase [Exiguobacterium sibiricum
255-15]
gi|226706033|sp|B1YKF9|TRMB_EXIS2 RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; AltName:
Full=tRNA(m7G46)-methyltransferase
gi|171990790|gb|ACB61712.1| tRNA (guanine-N(7)-)-methyltransferase [Exiguobacterium sibiricum
255-15]
Length = 213
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 10/97 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ I+I++GSG G + Q + + L ES + ++ +V++ A +
Sbjct: 34 EFKNENPIYIEVGSGKGAFITGMAKQYPEVNFVAIELFESVA--VAIVQKMVEEPLANVR 91
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
V ++ + AR L +S PW
Sbjct: 92 VLTVDAKDLRDFFEKGE--VAR------VYLNFSDPW 120
>gi|167823210|ref|ZP_02454681.1| putative biotin biosyntehsis related protein [Burkholderia
pseudomallei 9]
gi|226194421|ref|ZP_03790019.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
Pakistan 9]
gi|225933506|gb|EEH29495.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
Pakistan 9]
Length = 251
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|86156674|ref|YP_463459.1| 50S ribosomal protein L11P methyltransferase [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85773185|gb|ABC80022.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 287
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G+G G +I + G V ++ + R +
Sbjct: 149 GASVLDVGTGSGL----LAIAARKLGAGRVTGNDNDPVAVAVARENAARNGVPEVALTEA 204
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYS 160
P + DV+ A LA +TL+E +
Sbjct: 205 A--LPAIGGAFDVVVANILA--NTLVELA 229
>gi|91773078|ref|YP_565770.1| methyltransferase [Methanococcoides burtonii DSM 6242]
gi|91712093|gb|ABE52020.1| methyltransferase [Methanococcoides burtonii DSM 6242]
Length = 283
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 9/83 (10%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-V 127
S +D+GSG G I S + V +E L+ + K
Sbjct: 63 LKKGSRVLDIGSGPGSLAIPLS-----EKVAHVTAVEPGKGMMELLQENISKYGINNIGC 117
Query: 128 FACRIQEA---PQMITTCDVISA 147
R ++ + D++ A
Sbjct: 118 VNKRWEDLNVEDDLEGPYDIVIA 140
>gi|251790840|ref|YP_003005561.1| tellurite resistance protein TehB [Dickeya zeae Ech1591]
gi|247539461|gb|ACT08082.1| tellurite resistance protein TehB [Dickeya zeae Ech1591]
Length = 287
Score = 37.4 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV-QKTAARGKVFA 129
P +DLG GGG + +++G V + L +++ ++ +R + F
Sbjct: 119 QPGKALDLGCGGGRNALYL-----NLKGFDVTACDKNAMSIDKLNHIIADESLSRIEAFV 173
Query: 130 CRIQEAPQMITTCDVISA 147
I +A + D I +
Sbjct: 174 HDINQA-DVRHQYDFILS 190
>gi|229115689|ref|ZP_04245094.1| Methyltransferase type 12 [Bacillus cereus Rock1-3]
gi|228667831|gb|EEL23268.1| Methyltransferase type 12 [Bacillus cereus Rock1-3]
Length = 300
Score = 37.4 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 36/124 (29%), Gaps = 12/124 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 9 LETY-----DWNSK--LTYLKNTRDLYYNDDYVSFLVNSVWKINKPVHIVDFGCGYGYLG 61
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + E ++ D+
Sbjct: 62 LVLMPLLPE--GSKYTGIDSGETLLAEARELFHLLPYESEFIEGDATEI-ELNDKYDIAI 118
Query: 147 ARAL 150
A
Sbjct: 119 CHAF 122
>gi|218551620|ref|YP_002385412.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia fergusonii
ATCC 35469]
gi|226712954|sp|B7LNK6|RSMC_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|218359162|emb|CAQ91825.1| 16S RNA m2G1207 methylase [Escherichia fergusonii ATCC 35469]
Length = 343
Score = 37.4 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 39 WSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSI 91
W + N L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 159 WGE-YNVDGLT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFAR 216
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I + L + R + G+VFA + ++ D+I +
Sbjct: 217 HSPKIR---LTLCDVSAPAVEASRATLAANGIEGEVFASNV--FSEVKGRFDMIIS 267
>gi|75676594|ref|YP_319015.1| hypothetical protein Nwi_2409 [Nitrobacter winogradskyi Nb-255]
gi|74421464|gb|ABA05663.1| 3-demethylubiquinone-9 3-O-methyltransferase [Nitrobacter
winogradskyi Nb-255]
Length = 217
Score = 37.4 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 7/87 (8%)
Query: 63 LRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L+ ++L + +D+G GF + + V ++ ++ R Q
Sbjct: 51 LKAYRLLDHIRDKTVLDIGCNAGFLSVSLAKA-----AQHVTGLDINPFLSALARTAAQA 105
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
F E + DV+ +
Sbjct: 106 LGRTNTEFLATGFEDAPLRGPYDVVMS 132
>gi|197100344|ref|NP_001126260.1| protein arginine N-methyltransferase 1 [Pongo abelii]
gi|55730867|emb|CAH92152.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 37.4 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 21/90 (23%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITS---------IQLSSIEGGLVNLIESKNKKASFLRYV 117
+ + +D+GSG G + + I+ SI V ++ KA+ L +V
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECPSISDYAVKIV-----KANKLDHV 120
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
V + +++E + D+I +
Sbjct: 121 V-------TIIKGKVEEVELPVEKVDIIIS 143
>gi|145221333|ref|YP_001132011.1| methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
gi|145213819|gb|ABP43223.1| Methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
Length = 236
Score = 37.4 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 15/96 (15%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +D+GSG G + ++ + GGL ++ + R V +
Sbjct: 77 LPVGGVALDVGSGPG--NVTAALGRAVGPGGLALGVDVSEPMLA--RAVAAEAGPNVGFL 132
Query: 129 ACRIQEAPQMITTCDVISA-----------RALADL 153
Q+ P + D + + RA+A++
Sbjct: 133 RADAQDLPLSDESVDGVVSIAMLQLIPEPARAVAEM 168
>gi|302686362|ref|XP_003032861.1| hypothetical protein SCHCODRAFT_15469 [Schizophyllum commune H4-8]
gi|300106555|gb|EFI97958.1| hypothetical protein SCHCODRAFT_15469 [Schizophyllum commune H4-8]
Length = 273
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 26/123 (21%)
Query: 45 LVSSSTVEDFWIRH---VEDSLRVFQLH------PYPSIWIDLGSGGGFPGIITSIQLSS 95
L + T W H + S H P + ++LG+G G P I+ +
Sbjct: 56 LTTPDTDAANWELHASSIWTSAVYLADHIEEIELPPEASVLELGAGAGLPSIVLAALHPH 115
Query: 96 IEGGLVNLIE-SKNKKASFLRYVVQKTAARGKVFACRIQ---------EAPQMITT-CDV 144
V + + + + L+ ++ CR + + DV
Sbjct: 116 ---ASVTITDYPDQQVLATLQQNIESNH---VASHCRAAGYAWGTDPVHVLRYAPSGYDV 169
Query: 145 ISA 147
+ A
Sbjct: 170 VLA 172
>gi|240138279|ref|YP_002962751.1| putative ubiE/COQ5 methyltransferase family enzyme
[Methylobacterium extorquens AM1]
gi|240008248|gb|ACS39474.1| putative ubiE/COQ5 methyltransferase family enzyme
[Methylobacterium extorquens AM1]
Length = 269
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 8/96 (8%)
Query: 55 WIRHVEDSL--RVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
R + DS+ V +L P P +DL +G G+ + + G V +
Sbjct: 26 ISRGIADSIEHCVLRLDPKPGERVLDLATGTGWTSRVVA-----RRGAQVTGADISADLL 80
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
SF + + P D I +
Sbjct: 81 SFAAEQARAEGLDINYQLGDAERLPFADGAFDAIIS 116
>gi|218514500|ref|ZP_03511340.1| putative methyltransferase protein [Rhizobium etli 8C-3]
Length = 133
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 9/101 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G GF ++++ G V I+S + R+ A
Sbjct: 42 VVPDDLAGRSVLDIGCNAGF----YTLEMKRRNAGRVLGIDSDPRYLEQARFAADHFALD 97
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + E Q+ T D++ + L P L
Sbjct: 98 IEFRQMSVYEVAQLGETFDLVLF-----MGVLYHLRHPLLA 133
>gi|217034302|ref|ZP_03439719.1| hypothetical protein HP9810_885g33 [Helicobacter pylori 98-10]
gi|216943274|gb|EEC22739.1| hypothetical protein HP9810_885g33 [Helicobacter pylori 98-10]
Length = 238
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFFSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+VF + I D I
Sbjct: 76 KNALKFPNAQVFESDFLDFNPPIL-YDAIVC 105
>gi|162448507|ref|YP_001610874.1| precorrin-6Y C(5,15)-methyltransferase (decarboxylating) [Sorangium
cellulosum 'So ce 56']
gi|161159089|emb|CAN90394.1| Precorrin-6Y C(5,15)-methyltransferase (decarboxylating) [Sorangium
cellulosum 'So ce 56']
Length = 442
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + P +W D+G+G G I ++ G V IE + R V+
Sbjct: 248 SIASMTIRPDAVVW-DVGAGSGSVSIEAAMLCP---LGRVYAIEVDPEGVEICRDNVRAH 303
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
+V A R EA + D +
Sbjct: 304 GVDNVRVVAGRAPEALAALEDPDAV 328
>gi|126641069|ref|YP_001084053.1| putative methyltransferase [Acinetobacter baumannii ATCC 17978]
Length = 143
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ +Q A+ +
Sbjct: 5 QNAHVLDICTGSGALGFEAL----SRGAASVYMIEPDKMQARFLKDNIQLLKAQNCHLIN 60
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 61 ATAQQALPRLKEQFDVV 77
>gi|313619328|gb|EFR91061.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
(decarboxylating) [Listeria innocua FSL S4-378]
Length = 189
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 15/107 (14%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + I+ V IE ++ K
Sbjct: 22 SIDLLGLDNTSKKLLDVGAGTGSVGLQVAYNFPHIK---VTAIERNKDAVDLIKQNQAKF 78
Query: 122 AARGKVFACRIQ--EAPQMITTCDVISARAL-----ADLDTLLEYSF 161
E PQ D I +L ++++S
Sbjct: 79 GVENLAVIEAYAPIELPQE-EKFDAI----FIGGSGGNLTDIIDWSL 120
>gi|305663755|ref|YP_003860043.1| O-methyltransferase family 3 [Ignisphaera aggregans DSM 17230]
gi|304378324|gb|ADM28163.1| O-methyltransferase family 3 [Ignisphaera aggregans DSM 17230]
Length = 194
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 63 LRVFQLHPYPS---IWIDLGSGGGFPGIITSIQLSS--IEGGLVNLIESKNKKASFLRYV 117
L VF P +D G+G GF I + L V +E +K+ LR V
Sbjct: 36 LVVFLYVPQQGSSITVVDGGAGIGFSTIWMAKALEDSCRSSCRVIAVEVNDKRVKMLRRV 95
Query: 118 VQKTAAR---GKVFACRIQEAPQM--ITTCDVI 145
+ + + + ++F + +M + D+
Sbjct: 96 IDELSLKRVSIEIFHGDFIDFIEMMPEESIDIA 128
>gi|255076253|ref|XP_002501801.1| predicted protein [Micromonas sp. RCC299]
gi|226517065|gb|ACO63059.1| predicted protein [Micromonas sp. RCC299]
Length = 524
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 7/87 (8%)
Query: 63 LRVFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L V L + +D G GGG + + L+++K +
Sbjct: 160 LFVAPLLRRKPTAKVVDFGCGGGHQTLPLAYHFPD---ATFVLVDAKARSLEVAERRAAA 216
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
R C + DV A
Sbjct: 217 AGLRN--VRCVLGFIEDFDEDFDVGVA 241
>gi|15891430|ref|NP_357102.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium
tumefaciens str. C58]
gi|24418727|sp|Q8UA66|UBIG_AGRT5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|15159834|gb|AAK89887.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium
tumefaciens str. C58]
Length = 250
Score = 37.0 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + K +++ A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GATVVGADPSEKNIGIASTHARESGVSVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
++ + + DVI
Sbjct: 119 TAEQLQEAGESFDVI 133
>gi|300939355|ref|ZP_07154023.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
gi|300455759|gb|EFK19252.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
Length = 343
Score = 37.0 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 39 WSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSI 91
W + N L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 159 WGE-YNVDGLT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFAR 216
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I + L + R + G+VFA + ++ D+I +
Sbjct: 217 HSPKIR---LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|262301065|gb|ACY43125.1| arg methyltransferase [Metajapyx subterraneus]
Length = 244
Score = 37.0 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN-----KKASFLR 115
+S+ + + +D+G G G I S+ + V IE N KK
Sbjct: 12 NSMYHNKHLFKDKVVLDVGCGTG----ILSMFAAKAGAKAVYGIECSNIVEFAKKIVEQN 67
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ + + +++E + D+I +
Sbjct: 68 HMSE----TVHIVRGKVEEVQLPVEKVDIIIS 95
>gi|191167391|ref|ZP_03029206.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
B7A]
gi|256025289|ref|ZP_05439154.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia sp.
4_1_40B]
gi|190902531|gb|EDV62265.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
B7A]
Length = 343
Score = 37.0 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 39 WSKKIN---LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSI 91
W + N L T+ + R D S L + L P+ +D+G G G + +
Sbjct: 159 WGE-YNVDGLT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFAR 216
Query: 92 QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
I + L + R + G+VFA + ++ D+I +
Sbjct: 217 HSPKIR---LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|317123953|ref|YP_004098065.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Intrasporangium calvum DSM 43043]
gi|315588041|gb|ADU47338.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Intrasporangium calvum DSM 43043]
Length = 412
Score = 37.0 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 5/98 (5%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+ + + + + L P P + DLG+G G GI + Q I V +E
Sbjct: 226 DHDGQLTKRIIRAAALAHLAPQPGDVMWDLGAGAGSVGIEFARQHPRIR---VYAVERDQ 282
Query: 109 KKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVI 145
+A +R + +V +A ++ D I
Sbjct: 283 LRAKRIRTNADRLGVPTLEVVVASAADATGILPAPDAI 320
>gi|229087818|ref|ZP_04219934.1| Protein hemK [Bacillus cereus Rock3-44]
gi|228695493|gb|EEL48362.1| Protein hemK [Bacillus cereus Rock3-44]
Length = 283
Score = 37.0 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 23/81 (28%), Gaps = 4/81 (4%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
D+G+G G I ++ + V ++ + + A
Sbjct: 110 FGKQELHVADIGTGSGAISITLAL---ENQNLHVYTVDIAKESIEVAQENANALGANVTF 166
Query: 128 FACR-IQEAPQMITTCDVISA 147
+ + + DV+ +
Sbjct: 167 YHGDLLSPFYETGQKLDVVVS 187
>gi|226354990|ref|YP_002784730.1| hypothetical protein Deide_01670 [Deinococcus deserti VCD115]
gi|226316980|gb|ACO44976.1| putative methyltransferase, HemK family [Deinococcus deserti
VCD115]
Length = 284
Score = 37.0 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 8/97 (8%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
E W+ H+ SL+ P +D+G+G G + + V + +
Sbjct: 96 PETEWLLHL--SLQDLSAVSLP-RVLDVGTGSGALALGLKAARPDAQ---VWATDISPEA 149
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + + D+I +
Sbjct: 150 LTLAQENSARNGLEVTFVQGSL--LAGLAGPFDLIVS 184
>gi|321442003|gb|ADW85416.1| arg methyltransferase [Lacosoma chiridota]
Length = 244
Score = 37.0 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIVEANHLDDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|307703575|ref|ZP_07640517.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
gi|307622982|gb|EFO01977.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
Length = 193
Score = 37.0 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ R ++ +F
Sbjct: 52 VNEGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINNRALDLARQNAERNKVEATIF 107
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 108 QSNI--YEQIEGKFDHVISNPPIRA 130
>gi|281424314|ref|ZP_06255227.1| SmtA protein [Prevotella oris F0302]
gi|281401583|gb|EFB32414.1| SmtA protein [Prevotella oris F0302]
Length = 231
Score = 37.0 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + + + +D+G+G G ++ + + + +++ E ++A
Sbjct: 25 DGVLLGAWARGGNRVLDIGTGTGVIALMLAQRFPEAKITAIDIAEEACRQAKE-NVSASP 83
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
A + +V +QE D I +
Sbjct: 84 FAHQVQVEQTSLQEFES-AERFDCIVS 109
>gi|237742324|ref|ZP_04572805.1| methyltransferase [Fusobacterium sp. 4_1_13]
gi|229429972|gb|EEO40184.1| methyltransferase [Fusobacterium sp. 4_1_13]
Length = 370
Score = 37.0 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ V I+ K
Sbjct: 174 CIQLMREVEEPN-ILDIGSGTGAISIAIA---NELKSSSVTGIDINEKAIELANENKTLN 229
Query: 122 AARGKVF-ACRIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 230 KIENVNFIKSDLFEKIDKDFKYDLIVS 256
>gi|218235275|ref|YP_002370105.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus B4264]
gi|218163232|gb|ACK63224.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacillus cereus B4264]
Length = 283
Score = 37.0 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHFGD---------EKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + + DV+ +
Sbjct: 154 KENAKALGAVVTFYHGDLLSPFHKTGQKLDVVVS 187
>gi|254248615|ref|ZP_04941935.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184]
gi|124875116|gb|EAY65106.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184]
Length = 282
Score = 37.0 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 13/92 (14%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +D+G G G + +I I+ + R ++ + +
Sbjct: 50 TRVLDVGCGTG--AVTLAIARRLGASAQCTGIDISARMIDAARARAERGGVPARFVCADV 107
Query: 133 QEAPQMITTCDVISA-----------RALADL 153
Q + D++ + RA A+L
Sbjct: 108 QTHAFEPASVDLLVSRLGVMFFDDPVRAFANL 139
>gi|325107536|ref|YP_004268604.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
gi|324967804|gb|ADY58582.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
Length = 252
Score = 37.0 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 12/92 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-- 120
L + + P ++ G G G I + L E V + + FL + +
Sbjct: 34 LSLLKDLPANPRIVEFGCGTGVASIPLARSL-DCELTAVEIHQP------FLDKLAENAS 86
Query: 121 ---TAARGKVFACRIQEAPQMITTCDVISARA 149
R + + E + DVI + A
Sbjct: 87 RDGVGDRIETVQADMGEPAFPEKSFDVIWSEA 118
>gi|254488301|ref|ZP_05101506.1| 3-demethylubiquinone-9 3-O-methyltransferase [Roseobacter sp.
GAI101]
gi|214045170|gb|EEB85808.1| 3-demethylubiquinone-9 3-O-methyltransferase [Roseobacter sp.
GAI101]
Length = 248
Score = 37.0 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V ++ + + +++ +
Sbjct: 66 RILDIGCGGGLLSEPMARLGAD-----VVGADAAERNIPVAQVHAEQSGLTIDYRHTTAE 120
Query: 134 EAPQMITTCDVI 145
+ DV+
Sbjct: 121 AMAEAGEQFDVV 132
>gi|187920066|ref|YP_001889097.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Burkholderia
phytofirmans PsJN]
gi|187718504|gb|ACD19727.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia phytofirmans PsJN]
Length = 407
Score = 37.0 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI +S IE ++ F+ +
Sbjct: 239 ITLARLAPTPGELLWDVGAGSGSIGIEWMRAHASCRAIA---IEGHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R EA Q + D +
Sbjct: 296 GVPGLQLVAGRAPEALQGLPVPDAV 320
>gi|321442033|gb|ADW85431.1| arg methyltransferase [Trogoptera salvita]
Length = 244
Score = 37.0 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIVEANHLDDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|27479674|gb|AAO17201.1| TcdA2 [Photorhabdus luminescens]
Length = 2499
Score = 37.0 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 19/78 (24%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKL---------------EYFYFLFLKWSKKINLVS 47
S + RA YL + YN++ + L + E + LK++K INL
Sbjct: 277 EIKSIQMARAEYLKSYYNLTDKELNQFSKKIKQIDSLWNIGDEITQYHLLKFNKAINLSR 336
Query: 48 SSTVEDFWIRHVEDSLRV 65
S+ + + +S+ +
Sbjct: 337 STELSPI----ILNSIAI 350
>gi|20806632|ref|NP_621803.1| SAM-dependent methyltransferase [Thermoanaerobacter tengcongensis
MB4]
gi|20515079|gb|AAM23407.1| SAM-dependent methyltransferases [Thermoanaerobacter tengcongensis
MB4]
Length = 251
Score = 37.0 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS-FLRYV-VQK 120
L F +DLG G G I I + + + +E + + +R V +
Sbjct: 37 LANFVTAKRGDRIVDLGCGNGI--IPILIA-AKTKDTFIYGVEIQEEMVDMAIRSVAINS 93
Query: 121 TAARGKVFACRIQEAPQMI--TTCDVISA 147
R K+ ++E +++ DV+++
Sbjct: 94 LENRIKIIHGDVREVEKLLGYEKFDVVTS 122
>gi|255282729|ref|ZP_05347284.1| methlytransferase, UbiE/COQ5 family [Bryantella formatexigens DSM
14469]
gi|255266750|gb|EET59955.1| methlytransferase, UbiE/COQ5 family [Bryantella formatexigens DSM
14469]
Length = 252
Score = 37.0 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 5/79 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G+G GF +I L+ G V ++ R +
Sbjct: 48 PEQVSVLDIGTGPGF----FAIILAEA-GYHVTAVDYTAAMLKQARRNAGVLSDSITWKI 102
Query: 130 CRIQEAPQMITTCDVISAR 148
Q T DVI +R
Sbjct: 103 MDAQNLDFEDNTFDVIVSR 121
>gi|218510200|ref|ZP_03508078.1| hypothetical protein RetlB5_23674 [Rhizobium etli Brasil 5]
Length = 280
Score = 37.0 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 64 RVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK---ASFLRYVVQ 119
+ + P P +D+G+G G + EG V +E A +R +
Sbjct: 50 AIREFLPRAPGTAVDIGAGRGIASYALA-----KEGFEVTALEPDASDLVGAGAIRALFN 104
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ + ++ P DV+ ARA+
Sbjct: 105 EVHLPISIAEEFSEKLPFSDNAFDVVFARAV 135
>gi|283788394|ref|YP_003368259.1| ribosomal RNA small subunit methyltransferase C [Citrobacter
rodentium ICC168]
gi|282951848|emb|CBG91558.1| ribosomal RNA small subunit methyltransferase C [Citrobacter
rodentium ICC168]
Length = 342
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVALASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGIEGDVFASNV--FSEVTGRFDMIIS 267
>gi|260555953|ref|ZP_05828173.1| RsmD family RNA methyltransferase [Acinetobacter baumannii ATCC
19606]
gi|260410864|gb|EEX04162.1| RsmD family RNA methyltransferase [Acinetobacter baumannii ATCC
19606]
Length = 183
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ +Q A+ +
Sbjct: 45 QNAHVLDICTGSGALGFEAL----SRGAASVYMIEPDKMQARFLKDNIQLLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|255066163|ref|ZP_05318018.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sicca ATCC
29256]
gi|255049708|gb|EET45172.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sicca ATCC
29256]
Length = 239
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 10/90 (11%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS +D+G GGG I S +++ V I+ K +
Sbjct: 46 IDSFA----QLAGKRVLDVGCGGG----ILSESMATRGAAHVTGIDMAEKSLETAQAHAA 97
Query: 120 KTAARGKVFAC-RIQE-APQMITTCDVISA 147
+ C R+++ A + + DV++
Sbjct: 98 AEGVDNIDYRCIRVEDLAAEQPHSFDVVTC 127
>gi|242782141|ref|XP_002479941.1| histone H4 arginine methyltransferase RmtA [Talaromyces stipitatus
ATCC 10500]
gi|218720088|gb|EED19507.1| histone H4 arginine methyltransferase RmtA [Talaromyces stipitatus
ATCC 10500]
Length = 346
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + I +D+G G G I S+ V ++ S
Sbjct: 41 KDDVRTRSYRDSIYQNKHIFKDKIVLDVGCGTG----ILSMFAVRAGAKHVIGVDMSSII 96
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V A + + +++E D+I +
Sbjct: 97 EKAREI-VAVNGMADKITLLQGKMEEVTLPFPKVDIIVS 134
>gi|284107232|ref|ZP_06386373.1| hypothetical methyltransferase [Candidatus Poribacteria sp. WGA-A3]
gi|283829979|gb|EFC34258.1| hypothetical methyltransferase [Candidatus Poribacteria sp. WGA-A3]
Length = 475
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 25/86 (29%), Gaps = 7/86 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G G G + ++ I+ + R Q
Sbjct: 84 AIVNVLEGALRVLDVGCGVGILTTWYAACFPNV---TFLGIDRSLQSIEVARQFAQSRHL 140
Query: 124 RGKVFACRIQEAPQM--ITTCDVISA 147
F R + PQ T D I +
Sbjct: 141 DNVSF--RHCDIPQHEIPGTFDTIVS 164
>gi|228914115|ref|ZP_04077735.1| Methyltransferase, UbiE/COQ5 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228845568|gb|EEM90599.1| Methyltransferase, UbiE/COQ5 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 233
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
+D+G GGG ++ + V I+ F + ++Q F
Sbjct: 9 QNKRIVDIGCGGGIYTKELALMGAK----SVVGID-------FSKEILQAAKENCSGFSN 57
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
P T D++ +RA+
Sbjct: 58 ISFIHGDAHSTPYPNDTFDIVISRAV 83
>gi|229096712|ref|ZP_04227683.1| Methyltransferase type 12 [Bacillus cereus Rock3-29]
gi|228686918|gb|EEL40825.1| Methyltransferase type 12 [Bacillus cereus Rock3-29]
Length = 300
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 36/124 (29%), Gaps = 12/124 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 9 LETY-----DWNSK--LTYLKNTRDLYYNDDYVSFLVNSVWKINKPVHIVDFGCGYGYLG 61
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + E ++ D+
Sbjct: 62 LVLMPLLPE--GSKYTGIDSGETLLAEARELFHLLPYESEFIEGDATEI-ELNDKYDIAI 118
Query: 147 ARAL 150
A
Sbjct: 119 CHAF 122
>gi|255282418|ref|ZP_05346973.1| O-methyltransferase family protein [Bryantella formatexigens DSM
14469]
gi|255267002|gb|EET60207.1| O-methyltransferase family protein [Bryantella formatexigens DSM
14469]
Length = 214
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L++ P+ +++G+ GF I+ ++ V IE K+ S + +
Sbjct: 45 LKMLLRIKRPARILEVGTATGFSAILM--CENTPPETTVTTIEKYEKRISEAKENFARVG 102
Query: 123 ARGKV---FACRIQEAPQMITTCDVI 145
G++ ++ ++ + D +
Sbjct: 103 LSGRITLLEGDAMERLKELEGSFDFV 128
>gi|168703374|ref|ZP_02735651.1| methyltransferase small [Gemmata obscuriglobus UQM 2246]
Length = 348
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 9/88 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPG-IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L V ++ P +DLG G G G + ++ V I+S + + +
Sbjct: 200 LEVAEIRP-GDTVLDLGCGNGAVGCLAGAMAGPDAR---VTFIDSSLRAIALAELNAKAN 255
Query: 122 AARGK--VFACRIQEAPQMITTCDVISA 147
V A R+Q + DVI A
Sbjct: 256 GVTNTRFVNATRLQGLEE--DKFDVILA 281
>gi|196036882|ref|ZP_03104268.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus W]
gi|195990504|gb|EDX54486.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus W]
Length = 258
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
+D+G GGG ++ + V I+ F + ++Q F
Sbjct: 34 QNKRIVDIGCGGGIYTKELALMGAK----SVVGID-------FSKEILQAAKENCSGFSN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
P T D++ +RA+
Sbjct: 83 ISFIHGDAHSTPYPNDTFDIVISRAV 108
>gi|118477001|ref|YP_894152.1| methyltransferase [Bacillus thuringiensis str. Al Hakam]
gi|229183736|ref|ZP_04310956.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus BGSC 6E1]
gi|118416226|gb|ABK84645.1| methyltransferase [Bacillus thuringiensis str. Al Hakam]
gi|228599779|gb|EEK57379.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus BGSC 6E1]
Length = 258
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
+D+G GGG ++ + V I+ F + ++Q F
Sbjct: 34 QNKRIVDIGCGGGIYTKELALMGAK----SVVGID-------FSKEILQAAKENCSGFSN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
P T D++ +RA+
Sbjct: 83 ISFIHGDAHSTPYPNDTFDIVISRAV 108
>gi|49481067|ref|YP_035660.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49332623|gb|AAT63269.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 258
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
+D+G GGG ++ + V I+ F + ++Q F
Sbjct: 34 QNKRIVDIGCGGGIYTKELALMGAK----SVVGID-------FSKEILQAAKENCSGFSN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
P T D++ +RA+
Sbjct: 83 ISFIHGDAHSTPYPNDTFDIVISRAV 108
>gi|15893857|ref|NP_347206.1| putative methyltransferase [Clostridium acetobutylicum ATCC 824]
gi|15023435|gb|AAK78546.1|AE007572_1 Putative methyltransferase [Clostridium acetobutylicum ATCC 824]
Length = 209
Score = 37.0 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 15/105 (14%)
Query: 51 VEDFWIRHV------EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
V+D RH D +++ +D+G GGG + + E G V I
Sbjct: 23 VDDMNERHYELTGWGLDKIKI----DKAYKMLDIGCGGG---RTVNRLSKAAEEGEVYGI 75
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
+ + + ++ G+V ++ P DV++A
Sbjct: 76 DYSSDCVRWASEYNKELIKEGRVHISEASVEKLPFEDNKFDVVTA 120
>gi|332667230|ref|YP_004450018.1| type 11 methyltransferase [Haliscomenobacter hydrossis DSM 1100]
gi|332336044|gb|AEE53145.1| Methyltransferase type 11 [Haliscomenobacter hydrossis DSM 1100]
Length = 268
Score = 37.0 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
F +DLGSG G + + E G V ++ + R V K
Sbjct: 70 FAQIKPGDTVLDLGSGAGNDCFVAR--HETGEKGQVIGVDFSEAMIARARTNVAKLGFNN 127
Query: 126 KVF-ACRIQEAPQMITTCDVISA 147
F I+ P + DV+ +
Sbjct: 128 VEFRHGDIENLPVASNSVDVVVS 150
>gi|254480896|ref|ZP_05094142.1| Methyltransferase domain family protein [marine gamma
proteobacterium HTCC2148]
gi|214038691|gb|EEB79352.1| Methyltransferase domain family protein [marine gamma
proteobacterium HTCC2148]
Length = 321
Score = 37.0 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P S +D+G GGGF L G + ++ + F R + V
Sbjct: 77 LPKKSRMLDIGGGGGFYCWSFEYFL----FGEAHYVDVDPQSCEFAR---NELRLDN-VH 128
Query: 129 ACRIQEAPQMITTCDVISAR 148
C QE P + D+I R
Sbjct: 129 NCFAQELP-IDQKYDLIVCR 147
>gi|212711978|ref|ZP_03320106.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM
30120]
gi|212685500|gb|EEB45028.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM
30120]
Length = 277
Score = 37.0 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G G+ + +L + V ++ + + + Q+ A
Sbjct: 102 ALVRLPNAECRILDLGTGTGAIGLALASELPN---SCVVGVDFNPEAVALAQRNQQRLAL 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
F+ A D+I +
Sbjct: 159 PNIQFSQSDWFASLPNELFDMIVS 182
>gi|33599374|ref|NP_886934.1| heme biosynthesis protein [Bordetella bronchiseptica RB50]
gi|33566970|emb|CAE30883.1| heme biosynthesis protein [Bordetella bronchiseptica RB50]
Length = 251
Score = 37.0 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+DLG+G G + ++ E V + + Q+ AR + A
Sbjct: 88 RVLDLGTGSGAIAVSVALGCPQAE---VTATDLSAAALAVAEGNAQRLGARVRCLAGDWY 144
Query: 134 EAPQMITTCDVISA 147
EA D+I +
Sbjct: 145 EALPAQDRYDLIVS 158
>gi|148549090|ref|YP_001269192.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas putida F1]
gi|148513148|gb|ABQ80008.1| modification methylase, HemK family [Pseudomonas putida F1]
gi|313500007|gb|ADR61373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas putida BIRD-1]
Length = 302
Score = 37.0 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI+ + E V L + + +++ G+
Sbjct: 121 WLASEPARILDLCTGSGCIGIVAADVFPEAE---VVLADLSFQALEVANQNIERHGLDGR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFGGLPGQRFDLILS 199
>gi|157964937|ref|YP_001499761.1| putative methyltransferase [Rickettsia massiliae MTU5]
gi|157844713|gb|ABV85214.1| Putative methyltransferase [Rickettsia massiliae MTU5]
Length = 554
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ ++LG G I ++ V+L SK + V+ + +
Sbjct: 72 ENAKILELGCAAGGNVIPHAVLYPKAHFVGVDL--SKVQ-IDEANKNVKALGLKNIEFHH 128
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 129 CSITDIDDSFGKFDYIIC 146
>gi|293408055|ref|ZP_06651895.1| rsmC [Escherichia coli B354]
gi|291472306|gb|EFF14788.1| rsmC [Escherichia coli B354]
Length = 343
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|158336806|ref|YP_001517980.1| Mg-protoporphyrin IX methyl transferase [Acaryochloris marina
MBIC11017]
gi|158307047|gb|ABW28664.1| magnesium protoporphyrin O-methyltransferase [Acaryochloris marina
MBIC11017]
Length = 230
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ D G G G I + G V+ + K + Q+T + +
Sbjct: 61 GQSFCDAGCGVGSLSIPLATM-----GIQVSASDISKKMVEEAQSRAQQTLGQDQNPNFS 115
Query: 132 IQEAPQMITTCDVISARALADLDTLLEY 159
+Q+ + + D + LD L+ Y
Sbjct: 116 VQDLETLSGSFDTVIC-----LDVLIHY 138
>gi|110833385|ref|YP_692244.1| methyltransferase [Alcanivorax borkumensis SK2]
gi|110646496|emb|CAL15972.1| methyltransferase [Alcanivorax borkumensis SK2]
Length = 280
Score = 37.0 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P + +DLG+G G GI +++ + + V L+++ ++ A
Sbjct: 103 LALALPANARVVDLGTGTGAIGITLALEQPAWQ---VTLVDNSAAALQVAAANARQLGAT 159
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ D++ +
Sbjct: 160 VRCLQGSW--LTPCDGFFDLVVS 180
>gi|212712228|ref|ZP_03320356.1| hypothetical protein PROVALCAL_03314 [Providencia alcalifaciens DSM
30120]
gi|212684974|gb|EEB44502.1| hypothetical protein PROVALCAL_03314 [Providencia alcalifaciens DSM
30120]
Length = 310
Score = 37.0 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ S + + H V L P +DL +G G I + + E V+ +
Sbjct: 111 LIPRSPIGELINNHF-----VGLLSDEPQTILDLCTGSGCIAIACAYEFPEAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +V R M D+I
Sbjct: 163 DISTDVLAVTEQNIANHGLEHRVIPIRSDLFRDMPEVKYDLIV 205
>gi|328951707|ref|YP_004369042.1| Methyltransferase type 11 [Marinithermus hydrothermalis DSM 14884]
gi|328452031|gb|AEB12932.1| Methyltransferase type 11 [Marinithermus hydrothermalis DSM 14884]
Length = 235
Score = 37.0 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D G G GF + + + ++ + ++ + AR + R
Sbjct: 43 GRRVLDAGCGAGFNTVWLARAGAEA-----YGVDFSEAQLAYALRLAFTQGARAEFVLAR 97
Query: 132 IQEAPQMITTCDVISA 147
++ P + D++ +
Sbjct: 98 LEALPYPDASFDLVVS 113
>gi|302380503|ref|ZP_07268968.1| O-methyltransferase [Finegoldia magna ACS-171-V-Col3]
gi|303234056|ref|ZP_07320705.1| O-methyltransferase [Finegoldia magna BVS033A4]
gi|302311446|gb|EFK93462.1| O-methyltransferase [Finegoldia magna ACS-171-V-Col3]
gi|302494981|gb|EFL54738.1| O-methyltransferase [Finegoldia magna BVS033A4]
Length = 214
Score = 37.0 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 19/135 (14%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+YL + ET+ +LE F N + E +R + L++ L P
Sbjct: 11 DYLRQLSKSNDETILELEIFAKE--------NHIPIVEPE---VRQL---LKIILLMEQP 56
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFAC 130
+++G+ G+ II + + +E+ K A+F R +K VF
Sbjct: 57 KSILEIGTAIGYSSIIMKKTCPDAK---IITVENYEKNANFARENFKKYGYDDIQLVFGD 113
Query: 131 RIQEAPQMITTCDVI 145
+ M T D+I
Sbjct: 114 GYEVMKNMDTKFDLI 128
>gi|241896266|ref|ZP_04783562.1| cyclopropane-fatty-acyl-phospholipid synthase [Weissella
paramesenteroides ATCC 33313]
gi|241870507|gb|EER74258.1| cyclopropane-fatty-acyl-phospholipid synthase [Weissella
paramesenteroides ATCC 33313]
Length = 396
Score = 37.0 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+GSG G IIT+ Q +E V L E + ++
Sbjct: 157 VHHILDKL----NSEPGKTLLDIGSGWGT-LIITAAQEYGLESYGVTLSEE---QYAYTL 208
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V++ KV +++ + D +++
Sbjct: 209 QQVKELGLEDKVHVM-LKDYRDIDQQFDYVTS 239
>gi|126730063|ref|ZP_01745875.1| 3-demethylubiquinone-9 3-methyltransferase [Sagittula stellata
E-37]
gi|126709443|gb|EBA08497.1| 3-demethylubiquinone-9 3-methyltransferase [Sagittula stellata
E-37]
Length = 250
Score = 37.0 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 9/91 (9%), Positives = 28/91 (30%), Gaps = 10/91 (10%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V +++ + ++ +
Sbjct: 67 RILDIGCGGGLLCEPMARLGAE-----VVGVDAAARNIPVAEAHAAQSGLAIDYRHTTAE 121
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFPWL 164
+ DV+ +++ + + P +
Sbjct: 122 DLAAAGERFDVVL-----NMEVVEHVADPLV 147
>gi|68248563|ref|YP_247675.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
86-028NP]
gi|81337010|sp|Q4QPN2|RSMC_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|68056762|gb|AAX87015.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
influenzae 86-028NP]
Length = 330
Score = 37.0 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 17/100 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + S + + + + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSVIK---KSSTNAQITMTDIHAMALESAHKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA------------RALADLDTLLEY 159
+ + D+I + RA+ +L T ++
Sbjct: 248 V--FSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKW 285
>gi|309972854|gb|ADO96055.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae R2846]
Length = 330
Score = 37.0 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 17/100 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + S + + + + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSVIK---KSSTNAQITMTDIHAMALESAHKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA------------RALADLDTLLEY 159
+ + D+I + RA+ +L T ++
Sbjct: 248 V--FSDIEGKFDLIISNPPFHDGIDTAYRAVTELITQAKW 285
>gi|229105921|ref|ZP_04236545.1| Protein hemK [Bacillus cereus Rock3-28]
gi|228677495|gb|EEL31748.1| Protein hemK [Bacillus cereus Rock3-28]
Length = 283
Score = 37.0 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEKLHVADIGTGSGAISITLALENKNLH---VYTVDIAQESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + ++ DV+ +
Sbjct: 154 KENAKALGAEVTFYHGDLLSPFYKIHQKLDVVVS 187
>gi|189347186|ref|YP_001943715.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Chlorobium limicola DSM 245]
gi|189341333|gb|ACD90736.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Chlorobium limicola DSM 245]
Length = 296
Score = 37.0 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 34/105 (32%), Gaps = 8/105 (7%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ + H + L + +D+G+G G + + +E V ++
Sbjct: 101 PRPETELLVEHAAEFLTTRKPVNPECRLLDIGTGSGCIAVTLAGLFPYLE---VTALDRS 157
Query: 108 NKKASFLRYVVQKTAARGKV--FACRIQE---APQMITTCDVISA 147
R +K ++ F + + + + DVI +
Sbjct: 158 EDALDVARGNARKQGVLDRILFFQADMFDPDLVSRFSSPFDVIVS 202
>gi|331701736|ref|YP_004398695.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929]
gi|329129079|gb|AEB73632.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929]
Length = 203
Score = 37.0 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 13/86 (15%)
Query: 39 WSKKI---NLVSSSTVEDFWIRHVED--SLRVFQLHPYP----SIWIDLGSGGGFPGIIT 89
W+ + NLV ++ + +H D S + Y +D+G+G G GI
Sbjct: 21 WNFALLGNNLV-FTSDNGVFSKHTVDYGSRVLVNHINYDLIPDGKLLDMGTGYGPIGISI 79
Query: 90 SIQLSSIEGGLVNLIE---SKNKKAS 112
+ + ++++ E + KK +
Sbjct: 80 AKAFPDRQIDMIDVNEVALALAKKNA 105
>gi|260913362|ref|ZP_05919843.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260632593|gb|EEX50763.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 270
Score = 37.0 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFA 129
+D+G GGG I+ S+ + V ++ S L+ Q
Sbjct: 63 NADTLLDVGCGGG--AIVLSVA---SQLRQVYGLDYSEGMLSVLQQRAQNLGLDNVQSIR 117
Query: 130 CRIQEAPQMITTCDV-ISARA--LADLDT 155
+E + CD+ +S+R+ +ADLD
Sbjct: 118 KSWEENWDDVPECDICVSSRSSMVADLDK 146
>gi|209527308|ref|ZP_03275817.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
gi|209492234|gb|EDZ92580.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
Length = 442
Score = 37.0 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
Query: 16 LNTYNVSRETLEKLE--YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LHP 70
+N ++ R+ E+ + + + ++ S + N E +I ++ + +
Sbjct: 4 INESDLQRKIREQFDFTLYPRIPVEKSPETN------YEHLYIHNLLTPYYLRNQQVIQT 57
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D G G G+ + ++ G + I+ K R ++ F
Sbjct: 58 EGKVILDAGCGSGYKALALALANP---GAKIVGIDISEKSVEASRDRLKYHGIENAEFHA 114
Query: 131 -RIQEAPQMITTCDVI 145
I+E P + D I
Sbjct: 115 MYIEELPSLGWEFDYI 130
>gi|156101910|ref|XP_001616648.1| protein-L-isoaspartate O-methyltransferase beta-aspartate
methyltransferase [Plasmodium vivax SaI-1]
gi|148805522|gb|EDL46921.1| protein-L-isoaspartate O-methyltransferase beta-aspartate
methyltransferase, putative [Plasmodium vivax]
Length = 224
Score = 37.0 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
Query: 62 SLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLS--SIEGGLVNLIESKNKKASFLRYVV 118
SL+ + + S ID+GSG G+ + +I+ + V +E A+F +
Sbjct: 67 SLKRLMDVLKPGSRAIDVGSGSGYITVCMAIRTKVLENKDSFVIGLERVKDVANFSIENI 126
Query: 119 -----QKTAARG-KVFACRI----QEAPQMITTCDVI 145
+ K+ I ++ + + D I
Sbjct: 127 KRDKPELLHLDNFKIIHKNIYQVSEQEKEELGLFDAI 163
>gi|78187699|ref|YP_375742.1| methylase involved in ubiquinone/menaquinone biosynthesis-like
[Chlorobium luteolum DSM 273]
gi|78167601|gb|ABB24699.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
protein [Chlorobium luteolum DSM 273]
Length = 282
Score = 37.0 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK---ASFLRYVVQKTAARGKVF 128
+D+G+G G + +G V +E + A +R + + + V
Sbjct: 60 SGKALDVGAGRGIASYALA-----RDGFTVTALEPDTSELVGAEAIRRLAIEESLPISVE 114
Query: 129 ACRIQEAPQMITTCDVISARAL 150
+ P + DV+ ARA+
Sbjct: 115 VEFSERLPFADNSFDVVFARAV 136
>gi|308050534|ref|YP_003914100.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas
balearica DSM 9799]
gi|307632724|gb|ADN77026.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas
balearica DSM 9799]
Length = 279
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + ++ ++ + R + V
Sbjct: 108 LPDDAEVVDLGTGTGAIALALKSEQPGWR---ISAVDRIADAVALARANSEALDLPITVH 164
Query: 129 ACRIQEAPQMITTCDVISA 147
E P D+I +
Sbjct: 165 HGSWFE-PLSGQRFDLIVS 182
>gi|193076741|gb|ABO11451.2| putative methyltransferase [Acinetobacter baumannii ATCC 17978]
Length = 183
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ +Q A+ +
Sbjct: 45 QNAHVLDICTGSGALGFEAL----SRGAASVYMIEPDKMQARFLKDNIQLLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|281355321|ref|ZP_06241815.1| Methyltransferase type 11 [Victivallis vadensis ATCC BAA-548]
gi|281318201|gb|EFB02221.1| Methyltransferase type 11 [Victivallis vadensis ATCC BAA-548]
Length = 241
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G G G + E LV+L + ++A + V + A +
Sbjct: 56 RRILDIGCGAGNNTLKLLELAPGAECTLVDLAGAMVERA--VERVKRAGAGKVTGIQGDF 113
Query: 133 QEAPQMITTCDVISARAL 150
+E DVI A A+
Sbjct: 114 RETTLPERGFDVILAAAV 131
>gi|78222064|ref|YP_383811.1| UbiE/COQ5 methyltransferase [Geobacter metallireducens GS-15]
gi|78193319|gb|ABB31086.1| UbiE/COQ5 methyltransferase [Geobacter metallireducens GS-15]
Length = 269
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 6/76 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G+G G + + V+L A Q+ +R V
Sbjct: 43 PLRILDVGAGTGLLARQLADCHPAALLSCVDLAPGMAATAR------QRLGSRALVAVAD 96
Query: 132 IQEAPQMITTCDVISA 147
+ P + D + +
Sbjct: 97 AEHLPFAGASFDCVVS 112
>gi|33595094|ref|NP_882737.1| heme biosynthesis protein [Bordetella parapertussis 12822]
gi|33565171|emb|CAE35967.1| heme biosynthesis protein [Bordetella parapertussis]
Length = 270
Score = 37.0 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+DLG+G G + ++ + V + + Q+ AR + A
Sbjct: 107 RVLDLGTGSGAIAVSVALGCPQAQ---VTATDLSAAALAVAEGNAQRLGARVRCLAGDWY 163
Query: 134 EAPQMITTCDVISA 147
EA D+I +
Sbjct: 164 EALPAQDRYDLIVS 177
>gi|294785108|ref|ZP_06750396.1| methyltransferase [Fusobacterium sp. 3_1_27]
gi|294486822|gb|EFG34184.1| methyltransferase [Fusobacterium sp. 3_1_27]
Length = 383
Score = 37.0 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ V I+ K
Sbjct: 187 CIQLMREVEEPN-ILDIGSGSGAISIAIA---NELKSSSVTGIDINEKAIELANENKTLN 242
Query: 122 AARGKVFA-CRIQEAPQMITTCDVISA 147
+ F + E D+I +
Sbjct: 243 KIKNINFVKSNLFEKIDKDFKYDLIVS 269
>gi|226495789|ref|NP_001140251.1| hypothetical protein LOC100272292 [Zea mays]
gi|194698696|gb|ACF83432.1| unknown [Zea mays]
Length = 326
Score = 37.0 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 14/111 (12%)
Query: 42 KINLVSSSTVEDFWIRHVE---DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
+N S + RH +S + + ID+G GGG + G
Sbjct: 99 VMNPTRLSFIRSTLCRHFRRDPNSSKPLE----GLKVIDVGCGGGILSEPLARM-----G 149
Query: 99 GLVNLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V I++ +K K + + T A + + + D + +
Sbjct: 150 ATVTAIDAVDKNIKIASIHAASDPTTASIEYCCATAEGLVKEKRLFDAVIS 200
>gi|158302788|dbj|BAF85841.1| C5-O-methyltransferase [Streptomyces cyaneogriseus subsp.
noncyanogenus]
Length = 284
Score = 37.0 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FAC 130
+D+G G G P + + E + I ++ + +++ +V
Sbjct: 72 RRVLDVGCGSGRPALRLA----HSEPVDIVGITISPRQVELATALAERSGLANRVRFECA 127
Query: 131 RIQEAPQMITTCDVISA 147
+ P + D + A
Sbjct: 128 DAMDLPFPDASFDAVWA 144
>gi|150397704|ref|YP_001328171.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium medicae
WSM419]
gi|166201224|sp|A6UCF6|UBIG_SINMW RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|150029219|gb|ABR61336.1| ubiquinone biosynthesis O-methyltransferase [Sinorhizobium medicae
WSM419]
Length = 248
Score = 37.0 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + V ++ K R + R A
Sbjct: 64 EGLRLLDIGCGGGLLCEPMARMGAD-----VLGADASEKNIGIARTHAAGSGVRVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+ + + DV+
Sbjct: 119 TAEALAEAGESFDVV 133
>gi|329116075|ref|ZP_08244792.1| methyltransferase small domain protein [Streptococcus parauberis
NCFD 2020]
gi|326906480|gb|EGE53394.1| methyltransferase small domain protein [Streptococcus parauberis
NCFD 2020]
Length = 199
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L HP +DLG G G I L+ ++ +++ N+ + ++
Sbjct: 50 LSTLYFHP-GDKVLDLGCGYG----PLGISLAKVQKVDATMVDINNRAIDLSQKNAERNG 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+ I + T D I + RA
Sbjct: 105 VTATIKQSNI--YGNVQGTFDHIISNPPIRA 133
>gi|282850432|ref|ZP_06259811.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella parvula ATCC 17745]
gi|282579925|gb|EFB85329.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella parvula ATCC 17745]
Length = 195
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
SI +D+G+G G I ++ G V IE +K + ++K V
Sbjct: 34 IEENSIVLDVGAGTGSISIEAALAAPK---GHVYAIERFDKGIDLINENMKKFNVNNMTV 90
Query: 128 FACRIQEAPQMITTCDVIS 146
+ E + + D +
Sbjct: 91 IKSKAPEGMEELPELDAVI 109
>gi|220933877|ref|YP_002512776.1| hypothetical protein Tgr7_0697 [Thioalkalivibrio sp. HL-EbGR7]
gi|219995187|gb|ACL71789.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 509
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ P + ++LG G I + L + V L +A+ + +VQ
Sbjct: 36 IAAPDPSRARVLELGCAAGGNLIPMAWYLPEGQYLGVEL---SGAQAAHGQRMVQHLGLG 92
Query: 124 RGKVFACRIQEAPQMITTCDVIS 146
++ I + P D I
Sbjct: 93 NVEIRHADIMDLPLDGEPFDYII 115
>gi|297196406|ref|ZP_06913804.1| methyltransferase type 11 [Streptomyces pristinaespiralis ATCC
25486]
gi|197720881|gb|EDY64789.1| methyltransferase type 11 [Streptomyces pristinaespiralis ATCC
25486]
Length = 360
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G+G G ++ + + ++ R + F I ++
Sbjct: 184 LDVGTGQGHAPVVLAKAFP---RSRFHGLDQSEAGVEAGRAEAARLGLDNVRFL--IGDS 238
Query: 136 PQMITTCDVISA 147
++ D+I+A
Sbjct: 239 AEISGEYDLITA 250
>gi|195036128|ref|XP_001989523.1| GH18753 [Drosophila grimshawi]
gi|193893719|gb|EDV92585.1| GH18753 [Drosophila grimshawi]
Length = 507
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI S V I++ + + V + K+ R
Sbjct: 236 GKTVLDVGCGTG----ILSIFASQAGAESVVGIDNSKIVYTAMDIVRKNQVQNVKLIKGR 291
Query: 132 IQEAPQMITTCDVISA 147
+++ D+I +
Sbjct: 292 LEDTELPEPKYDIIIS 307
>gi|77918469|ref|YP_356284.1| QbsJ-like methyltransferase [Pelobacter carbinolicus DSM 2380]
gi|77544552|gb|ABA88114.1| QbsJ-like methyltransferase [Pelobacter carbinolicus DSM 2380]
Length = 366
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P S +DLGSG G GI + SS++ L + + V+ +
Sbjct: 161 AALPEFPSFSRMLDLGSGPGMIGIAVTAAHSSLQCCLFD----QPAVCKVADEVIAEYGM 216
Query: 124 RGKVFACRIQEAPQMITT-CDVISA 147
+V I D + A
Sbjct: 217 EDRVTTLSGDYLVDDIGKDYDFVLA 241
>gi|26988557|ref|NP_743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas putida KT2440]
gi|24983329|gb|AAN67446.1|AE016372_1 modification methylase, HemK family [Pseudomonas putida KT2440]
Length = 302
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI+ + E V L + + +++ G+
Sbjct: 121 WLASEPARILDLCTGSGCIGIVAADVFPEAE---VVLADLSFQALEVANQNIERHGLDGR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFGGLPGQRFDLILS 199
>gi|302185794|ref|ZP_07262467.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. syringae
642]
Length = 269
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLGSG G+ + EG +++ E LR+ +
Sbjct: 45 LARLPAQCNPSRWLDLGSGTGYFSRALAQAFGRSEGIALDIAEGM------LRHA-RPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P +C +I + L ++ +
Sbjct: 98 GAQHFIAGDAEHLPLHDQSCGLI----FSSLAV--QWCADF 132
>gi|254479291|ref|ZP_05092632.1| Methyltransferase small domain superfamily protein
[Carboxydibrachium pacificum DSM 12653]
gi|214034766|gb|EEB75499.1| Methyltransferase small domain superfamily protein
[Carboxydibrachium pacificum DSM 12653]
Length = 241
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS-FLRYV-VQKTAARGKVFA 129
+DLG G G I I + + + +E + + +R V + R K+
Sbjct: 36 GDRIVDLGCGNGI--IPILIA-AKTKDTFIYGVEIQEEMVDMAIRSVAINSLENRIKIIH 92
Query: 130 CRIQEAPQMI--TTCDVISA 147
++E +++ DV+++
Sbjct: 93 GDVREVEKLLGYEKFDVVTS 112
>gi|206603662|gb|EDZ40142.1| Modification methylase (HemK) [Leptospirillum sp. Group II '5-way
CG']
Length = 293
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 28/93 (30%), Gaps = 16/93 (17%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE----GGLVNLIESKNKKASFL 114
V DS P +DLG G G GI + V +E K A F
Sbjct: 117 VLDS-------RSPQRILDLGCGSGVLGISLLKEFPKARCLAVDRSVMPLEVSRKNALF- 168
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+R E ++ D+I +
Sbjct: 169 ----HGVQSRIHFIHGDWTEMLRLDQRFDLIVS 197
>gi|168029186|ref|XP_001767107.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681603|gb|EDQ68028.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 381
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 4/88 (4%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS+ H +D+G+G G I +I + V +E+ + V
Sbjct: 55 YDSIFKNARHFKGKTVLDVGTGSG----ILAIWSAQAGARKVYAVEATDMATHARALVAG 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
E + D+I +
Sbjct: 111 NKMENVVEVIEGSVEDISLPEQVDIIIS 138
>gi|73661501|ref|YP_300282.1| SAM-dependent methyltransferase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494016|dbj|BAE17337.1| putative SAM-dependent methyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 240
Score = 37.0 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 12/91 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G+G GF +I ++ G V I+ + + +
Sbjct: 46 GMKILDIGTGAGF----LAILCGNL-GSDVTGIDLSPEMIQSAKQNAESHHQDIHFQVMD 100
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ T D++ +R + + P
Sbjct: 101 AESLQFNDETFDMVISRNVT-------WLLP 124
>gi|296107542|ref|YP_003619243.1| methoxymalonyl CoA synthase [Legionella pneumophila 2300/99 Alcoy]
gi|295649444|gb|ADG25291.1| methoxymalonyl CoA synthase [Legionella pneumophila 2300/99 Alcoy]
Length = 630
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L+ Y +D+G G G + ++ + NL ES K +
Sbjct: 450 LACLDLNQY-RSILDVGGGDGTIACALAQAYPHLKITVYNLPESA--KIAQKNIDAMGLQ 506
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
R VF+ Q D+I
Sbjct: 507 KRISVFSGDFINDEQFPAGFDLI 529
>gi|282864607|ref|ZP_06273662.1| Methyltransferase type 11 [Streptomyces sp. ACTE]
gi|282560546|gb|EFB66093.1| Methyltransferase type 11 [Streptomyces sp. ACTE]
Length = 268
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +L P +D+G G PG IT+ + + G V ++S V ++
Sbjct: 33 LAELRP-GQRVLDVGCG---PGTITADLAALVAPGRVTGVDSSGDVLGQAAEVAEERGLD 88
Query: 125 GKVFA-CRIQEAPQMITTCDVI 145
FA + T DV+
Sbjct: 89 NVEFAVADVHALDFPDDTFDVV 110
>gi|270291186|ref|ZP_06197409.1| 16S RNA methylase RsmC [Pediococcus acidilactici 7_4]
gi|270280582|gb|EFA26417.1| 16S RNA methylase RsmC [Pediococcus acidilactici 7_4]
Length = 201
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 10/93 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L S +D+G G G GI + Q V + + + + +
Sbjct: 50 LEALPLDVPQSSILDVGCGYGPMGIALAKQFPEAR---VEMTDVNERALALAERNAEANG 106
Query: 123 A--RGKVFACRIQEAPQMITTCDVISA----RA 149
R +V+ EA T + + RA
Sbjct: 107 VAARTRVYHSDAYEAVA-KTDFTTVVSNPPVRA 138
>gi|257877102|ref|ZP_05656755.1| modification methylase HemK [Enterococcus casseliflavus EC20]
gi|257811268|gb|EEV40088.1| modification methylase HemK [Enterococcus casseliflavus EC20]
Length = 285
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ + L P +D+G+G G I + V+ +
Sbjct: 91 LIPRPETEELVE----NCLTKLP-ADQPLRVVDIGTGTGAIAIALKLARPQW---AVSAV 142
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + A + F E P D+I +
Sbjct: 143 DLSAEALAVAKENAAALGAEIRFFQGDTLE-PVADQQWDLIVS 184
>gi|257867024|ref|ZP_05646677.1| modification methylase HemK [Enterococcus casseliflavus EC30]
gi|257873359|ref|ZP_05653012.1| modification methylase HemK [Enterococcus casseliflavus EC10]
gi|257801080|gb|EEV30010.1| modification methylase HemK [Enterococcus casseliflavus EC30]
gi|257807523|gb|EEV36345.1| modification methylase HemK [Enterococcus casseliflavus EC10]
Length = 285
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ + L P +D+G+G G I + V+ +
Sbjct: 91 LIPRPETEELVE----NCLTKLP-ADQPLRVVDIGTGTGAIAIALKLARPQW---AVSAV 142
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + A + F E P D+I +
Sbjct: 143 DLSAEALAVAKENAAALGAEIRFFQGDTLE-PVADQQWDLIVS 184
>gi|303275215|ref|XP_003056906.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461258|gb|EEH58551.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 428
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 6/75 (8%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D G+G G + + S++ +E K + A + V I
Sbjct: 161 KVVDFGAGSGNLTLPLAAAFPSMD---FVAVEMKRRSADLVSQRAAAAGLSNVTVLCGMI 217
Query: 133 QEAPQMITTCDVISA 147
+ A I DV A
Sbjct: 218 ERAE--IGPFDVGVA 230
>gi|167031411|ref|YP_001666642.1| biotin biosynthesis protein BioC [Pseudomonas putida GB-1]
gi|166857899|gb|ABY96306.1| biotin biosynthesis protein BioC [Pseudomonas putida GB-1]
Length = 272
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 12/95 (12%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P W+DLGSG G + + + + G V++ E LR+ +
Sbjct: 48 LPAGLQPLHWLDLGSGTGHFSRMLAERFAQASGVAVDIAEGM------LRHARHEQGGAQ 101
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A + P + D++ + L ++
Sbjct: 102 YHVAGDAERLPLRDGSVDLV----FSSLAV--QWC 130
>gi|104780101|ref|YP_606599.1| methylase of polypeptide chain release factors [Pseudomonas
entomophila L48]
gi|95109088|emb|CAK13785.1| Methylase of polypeptide chain release factors [Pseudomonas
entomophila L48]
Length = 276
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 64 RVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+L P P+ +DLG+G G + + + + + V ++ + + Q+
Sbjct: 100 TALELVPAKPARVLDLGTGTGAIALALASECPAWQ---VTAVDRIEEAVALAERNRQRLG 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
D+I +
Sbjct: 157 LGNVQVRASHWYDALEGEHFDLILS 181
>gi|11499776|ref|NP_071019.1| rRNA (adenine-N6)-methyltransferase, putative [Archaeoglobus
fulgidus DSM 4304]
gi|2648335|gb|AAB89062.1| rRNA (adenine-N6)-methyltransferase, putative [Archaeoglobus
fulgidus DSM 4304]
Length = 180
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 19/101 (18%)
Query: 58 HVEDSLR-------------VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
H+ DS + L P ++ D+G+G G+ I + V +
Sbjct: 11 HILDSEWRRKIFPPEKVVEFIESLRPKKNVLFDVGAGTGYLTIPLARVFKK-----VYAV 65
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
E + A LR V++ ++ P++ DV+
Sbjct: 66 EISEEMAEVLRRRVEEEGLLNIGIIV-SEKPPEVDFRVDVV 105
>gi|73668813|ref|YP_304828.1| hypothetical protein Mbar_A1285 [Methanosarcina barkeri str.
Fusaro]
gi|1124958|emb|CAA63626.1| orf3 [Methanosarcina barkeri]
gi|72395975|gb|AAZ70248.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
gi|1587234|prf||2206350B ORF 3
Length = 262
Score = 37.0 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 19/113 (16%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
D W R ++ P S +D+G G G S+ + + G V I+ +
Sbjct: 43 ERDAWKRAFL------KVFPGKSLKILDVGCGTG----ELSLLFAEM-GHEVAGIDISGQ 91
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + A + P ++ D++ +R L ++ P
Sbjct: 92 MLKIAKAKAEALGADITFREGDAENPPFDTSSYDIVFSR-------HLLWTLP 137
>gi|317142561|ref|XP_001818952.2| HNRNP arginine N-methyltransferase [Aspergillus oryzae RIB40]
Length = 352
Score = 37.0 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 48 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 103
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + + + + +++E D+I +
Sbjct: 104 EKAKQI-VACNGLSDKITLLQGKMEEVVLPYPKVDIIIS 141
>gi|288937273|ref|YP_003441332.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22]
gi|290512677|ref|ZP_06552043.1| ribosomal RNA small subunit methyltransferase C [Klebsiella sp.
1_1_55]
gi|288891982|gb|ADC60300.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22]
gi|289775018|gb|EFD83020.1| ribosomal RNA small subunit methyltransferase C [Klebsiella sp.
1_1_55]
Length = 342
Score = 37.0 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 44 NLVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGG 99
NL T+ + R D S L + L P+ +D+G G G + + +
Sbjct: 166 NLT-IKTLPGVFSRDGLDVGSQLLLSTLEPHTKGKVLDVGCGAGVLAAVLASHSPKVR-- 222
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G VFA + ++ D+I +
Sbjct: 223 -LTLCDVSAPAVEASRATLAANGFAGDVFASNV--FSEVNGRFDMIIS 267
>gi|229161755|ref|ZP_04289734.1| Methyltransferase type 11 [Bacillus cereus R309803]
gi|228621722|gb|EEK78569.1| Methyltransferase type 11 [Bacillus cereus R309803]
Length = 261
Score = 37.0 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG I + + ++L E+ +KA Y+ Q A
Sbjct: 41 HNTRLLDIATGGGHVANILAPMFEEV--VALDLTETMLEKAK--GYIKQNGHENVSFVAG 96
Query: 131 RIQEAPQMITTCDVISAR 148
++ P + D I+ R
Sbjct: 97 NAEDLPFADHSFDTITCR 114
>gi|227510127|ref|ZP_03940176.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227190332|gb|EEI70399.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 288
Score = 37.0 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+G G I + ++ +S K A + Q
Sbjct: 116 YTNRPLKVLDIGTGSGAIAIALKANRPEWQVNASDISDSALKVA---QQNAQLHHVAINF 172
Query: 128 FACRIQEAPQMITTCDVISA 147
I + D+I +
Sbjct: 173 ILSDI--FAHINEAFDLIVS 190
>gi|83766810|dbj|BAE56950.1| unnamed protein product [Aspergillus oryzae]
Length = 345
Score = 37.0 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ + V ++ S
Sbjct: 40 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAAKAGAKHVIGVDMSSII 95
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + + + + +++E D+I +
Sbjct: 96 EKAKQI-VACNGLSDKITLLQGKMEEVVLPYPKVDIIIS 133
>gi|54297862|ref|YP_124231.1| hypothetical protein lpp1917 [Legionella pneumophila str. Paris]
gi|53751647|emb|CAH13069.1| hypothetical protein lpp1917 [Legionella pneumophila str. Paris]
Length = 630
Score = 37.0 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L+ Y +D+G G G + ++ + NL ES K +
Sbjct: 450 LACLDLNQY-RSILDVGGGDGTIACALAQAYPHLKITVYNLPESA--KIAQKNIDAMGLQ 506
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
R VF+ Q D+I
Sbjct: 507 KRISVFSGDFINDEQFPAGFDLI 529
>gi|291547717|emb|CBL20825.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Ruminococcus sp. SR1/5]
Length = 242
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEG--GLVNLIESKNKKASFLRYVVQKTAARG 125
L P P +++G G GF II + ++ G ++E + V+ G
Sbjct: 41 LGPEPLRILEVGCGPGFMSIIAARLGHDVKAIDGSSGMVEKARRNMRQYHQQVEICEEDG 100
Query: 126 KVFACRIQEAPQMITTCDVISAR-AL 150
++ + DVI +R A+
Sbjct: 101 VTLPLEQEQ------SYDVILSRDAV 120
>gi|229016798|ref|ZP_04173728.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH1273]
gi|229023003|ref|ZP_04179520.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH1272]
gi|228738309|gb|EEL88788.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH1272]
gi|228744534|gb|EEL94606.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH1273]
Length = 258
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
ID+G GGG ++ + V ++ F + ++Q K F
Sbjct: 34 QNKQVIDIGCGGGIYTKELALMGAK----SVVGLD-------FSKEILQAAKENCKGFPN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
P T D+I +RA+
Sbjct: 83 ISFIHGDAHNIPYPNETFDLIISRAV 108
>gi|195107291|ref|XP_001998247.1| GI23860 [Drosophila mojavensis]
gi|193914841|gb|EDW13708.1| GI23860 [Drosophila mojavensis]
Length = 387
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V ++ N F R V+ +
Sbjct: 98 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAANVIAVDCSN-IIEFARQVIIDNNLQDI 152
Query: 126 -KVFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 153 ITVVKGKIEEIELPNGIEKVDIIIS 177
>gi|223939251|ref|ZP_03631132.1| Methyltransferase type 11 [bacterium Ellin514]
gi|223892083|gb|EEF58563.1| Methyltransferase type 11 [bacterium Ellin514]
Length = 259
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +D+ +GGG G++ + G V L + +
Sbjct: 42 LPVKAKVLDVATGGGHTGLLLASL-----GHEVMLADIAQPMLDRAARTALERGFSVSTK 96
Query: 129 ACRIQEAPQMITTCDVISAR-A---LADLDTLLEYSFPWLYQK 167
++ P D+++ R A + + + + L K
Sbjct: 97 QHAAEQLPYPEEEFDLVTCRVAAHHFSSPENFIRETARVLKPK 139
>gi|159044281|ref|YP_001533075.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12]
gi|157912041|gb|ABV93474.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12]
Length = 274
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V HP+ +D+GSG G + + G +++ A R +
Sbjct: 101 VALAHPFD-TVLDIGSGSGCILLSLLAERPEATGLGIDISAPALDVA---RRNADRLGLA 156
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
G+ R ++ D+I +
Sbjct: 157 GRARFRRSDWLAEVDEQFDLIVS 179
>gi|52549692|gb|AAU83541.1| putative methyltransferase [uncultured archaeon GZfos30H9]
Length = 187
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
R+ + +DLG G G +I LS G V ++ ++ ++
Sbjct: 21 CARILEAEEEKRKILDLGCGSG----KLAIYLSEETGYDVTGVDPGRERI----EKAREN 72
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
++ +E T DV+ +
Sbjct: 73 SSSVTFEVQPAEETTFADNTFDVVVS 98
>gi|52842153|ref|YP_095952.1| methoxymalonyl CoA synthase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629264|gb|AAU28005.1| methoxymalonyl CoA synthase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 630
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L+ Y +D+G G G + ++ + NL ES K +
Sbjct: 450 LACLDLNQY-RSILDVGGGDGTIACALAQAYPHLKITVYNLPESA--KIAQKNIDAMGLQ 506
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
R VF+ Q D+I
Sbjct: 507 KRISVFSGDFINDEQFPAGFDLI 529
>gi|83648966|ref|YP_437401.1| SAM-dependent methyltransferase [Hahella chejuensis KCTC 2396]
gi|83637009|gb|ABC32976.1| SAM-dependent methyltransferase [Hahella chejuensis KCTC 2396]
Length = 291
Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 60 EDSLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL+ P P+ ID+G G GF + + + +V L +++ L +
Sbjct: 72 ADSLKALSKLPITPTSIIDIGCGKGFSTRLLA---QHTQAQIVAL-DNEQSALDELGECL 127
Query: 119 QKTAARGKVFACRIQ--EAPQMITTCDVISARALA 151
+V E P + D I + A A
Sbjct: 128 TAQGLDARVTLSCASMTEPPFTPESFDCIWSEAAA 162
>gi|323136533|ref|ZP_08071615.1| ubiquinone biosynthesis O-methyltransferase [Methylocystis sp. ATCC
49242]
gi|322398607|gb|EFY01127.1| ubiquinone biosynthesis O-methyltransferase [Methylocystis sp. ATCC
49242]
Length = 257
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 20/151 (13%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSKKI------NLVSSSTVEDFWIRHVEDSLRVF--- 66
++ +V+ E + + L+ S K+ N + + + D R + + +
Sbjct: 8 PHSASVNPEDVARFNRLGELWWDKSGKMGILHDINPIRVTYIRDHIRRLLLNDPKALNES 67
Query: 67 -QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ D+G GGG I S L+ + G V I+ + +K+
Sbjct: 68 GERPLEGVRIADIGCGGG----ILSESLAEL-GARVTGIDPAPNNIAVASRHAEKSGLDI 122
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTL 156
+ + D A+A L+ +
Sbjct: 123 DYRNITAEALAETGEQFD-----AVAALEVI 148
>gi|260550710|ref|ZP_05824918.1| N6-adenine-specific methylase [Acinetobacter sp. RUH2624]
gi|260406216|gb|EEW99700.1| N6-adenine-specific methylase [Acinetobacter sp. RUH2624]
Length = 181
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ +Q A+ +
Sbjct: 45 QNAQVLDICTGSGALGFEAL----SRGAAFVYMIEPDKTQARFLKENIQLLKAQNCHLVN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|239616734|ref|YP_002940056.1| ribosomal L11 methyltransferase [Kosmotoga olearia TBF 19.5.1]
gi|239505565|gb|ACR79052.1| ribosomal L11 methyltransferase [Kosmotoga olearia TBF 19.5.1]
Length = 273
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G G G I S+ + + G V I++ R +
Sbjct: 131 LKKFLKPGDSLLDVGCGTG----ILSVLAAKLRAGHVVGIDNDPNAIEKTRETSKINGVS 186
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ +A +I +
Sbjct: 187 LNILESNFLQALASDEKFHIIVS 209
>gi|157804158|ref|YP_001492707.1| seryl-tRNA synthetase [Rickettsia canadensis str. McKiel]
gi|157785421|gb|ABV73922.1| seryl-tRNA synthetase [Rickettsia canadensis str. McKiel]
Length = 554
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
S ++LG G I ++ V+L SK + + V++ + + +
Sbjct: 72 ENSRILELGCAAGGNLIPHAVLYPKAHFVGVDL--SKVQ-IDEAKKNVKELGLKNIEFYH 128
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 129 CSITDIDNSFGKFDYIIC 146
>gi|89073464|ref|ZP_01159987.1| putative adenine-specific methylase [Photobacterium sp. SKA34]
gi|89050728|gb|EAR56209.1| putative adenine-specific methylase [Photobacterium sp. SKA34]
Length = 310
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P+ +DL +G G GI + E V++++ + + + +V
Sbjct: 129 LSQEPTRIMDLCTGSGCIGIACAHMFPEAE---VDIVDISPEALAVAEQNIADHGLEQQV 185
Query: 128 FACR---IQEAPQMITTCDVISA 147
R +++ P+ D I +
Sbjct: 186 IPLRSDLLRDVPK--DKYDFIVS 206
>gi|325507984|gb|ADZ19620.1| Putative methyltransferase [Clostridium acetobutylicum EA 2018]
Length = 214
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 15/105 (14%)
Query: 51 VEDFWIRHV------EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
V+D RH D +++ +D+G GGG + + E G V I
Sbjct: 28 VDDMNERHYELTGWGLDKIKI----DKAYKMLDIGCGGG---RTVNRLSKAAEEGEVYGI 80
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
+ + + ++ G+V ++ P DV++A
Sbjct: 81 DYSSDCVRWASEYNKELIKEGRVHISEASVEKLPFEDNKFDVVTA 125
>gi|325964479|ref|YP_004242385.1| methylase involved in ubiquinone/menaquinone biosynthesis
[Arthrobacter phenanthrenivorans Sphe3]
gi|323470566|gb|ADX74251.1| methylase involved in ubiquinone/menaquinone biosynthesis
[Arthrobacter phenanthrenivorans Sphe3]
Length = 197
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 13/99 (13%)
Query: 65 VFQLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P P DLG G G ++ G V ++ K R +
Sbjct: 37 LLPLIPRPGSAVADLGCGTGTLSLLLGGA-----GHRVQGVDLSGKMVDIARAKAARGGI 91
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P + DV+ AR L ++ P
Sbjct: 92 AAEFVVGDASLPPLPPASFDVVLAR-----HVL--WALP 123
>gi|319740473|gb|ADV60530.1| arg methyltransferase [Phiditia sp. JCR-2009]
Length = 244
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKDKTVLDIGCGTG----ILSMFAAKAGASKVIAVECSN-IVDYARKIVEANGLSDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEQVDIIIS 95
>gi|237748471|ref|ZP_04578951.1| biotin synthesis protein bioC [Oxalobacter formigenes OXCC13]
gi|229379833|gb|EEO29924.1| biotin synthesis protein bioC [Oxalobacter formigenes OXCC13]
Length = 259
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 17/98 (17%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L PS +D G G GF + +L + +V + +G
Sbjct: 41 LPLSFKPSSLLDAGCGTGFGTQCLKCFWPDADMTGCDLS----------QEMVDRMHEKG 90
Query: 126 -KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+++ P D I L L++ P
Sbjct: 91 FSAVVGDLEKMPFDSDRFDFIWC----SLA--LQWCHP 122
>gi|206579318|ref|YP_002240577.1| ribosomal RNA small subunit methyltransferase C [Klebsiella
pneumoniae 342]
gi|226712957|sp|B5Y286|RSMC_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|206568376|gb|ACI10152.1| ribosomal RNA small subunit methyltransferase C [Klebsiella
pneumoniae 342]
Length = 342
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 10/108 (9%)
Query: 44 NLVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGG 99
NL T+ + R D S L + L P+ +D+G G G + + +
Sbjct: 166 NLT-IKTLPGVFSRDGLDVGSQLLLSTLEPHTKGKVLDVGCGAGVLAAVLASHSPKVR-- 222
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G VFA + ++ D+I +
Sbjct: 223 -LTLCDVSAPAVEASRATLAANGFAGDVFASNV--FSEVNGRFDMIIS 267
>gi|169824330|ref|YP_001691941.1| caffeoyl-CoA O-methyltransferase [Finegoldia magna ATCC 29328]
gi|167831135|dbj|BAG08051.1| caffeoyl-coA O-methyltransferase [Finegoldia magna ATCC 29328]
Length = 214
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 19/135 (14%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP 72
+YL + ET+ +LE F N + E +R + L++ L P
Sbjct: 11 DYLRQLSKSNDETILELEIFAKE--------NHIPIVEPE---VRQL---LKIILLMEQP 56
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFAC 130
+++G+ G+ II + + +E+ K A+F R +K VF
Sbjct: 57 KSILEIGTAIGYSSIIMKKTCPDAK---IITVENYEKNANFARENFKKYGYDDIQLVFGD 113
Query: 131 RIQEAPQMITTCDVI 145
+ M T D+I
Sbjct: 114 GYEVMKNMDTKFDLI 128
>gi|163851097|ref|YP_001639140.1| methyltransferase type 11 [Methylobacterium extorquens PA1]
gi|163662702|gb|ABY30069.1| Methyltransferase type 11 [Methylobacterium extorquens PA1]
Length = 269
Score = 37.0 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 8/96 (8%)
Query: 55 WIRHVEDSL--RVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
R + DS+ V +L P P +DL +G G+ + + G V +
Sbjct: 26 ISRGIADSIEHCVLRLDPKPGERVLDLATGTGWTSRVVA-----RRGAQVTGADISADLL 80
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
SF + + P D I +
Sbjct: 81 SFAAEQARAEGLDIDYQLGDAERLPFADGAFDAIIS 116
>gi|288917673|ref|ZP_06412036.1| Methyltransferase type 11 [Frankia sp. EUN1f]
gi|288350888|gb|EFC85102.1| Methyltransferase type 11 [Frankia sp. EUN1f]
Length = 221
Score = 37.0 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 4/87 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + ++L G GF +I+++ + V+ ++ +
Sbjct: 30 AALTDGLADGAAVLELAPGPGF----LAIEIARLGRYPVSALDISRTFVDIVAEQAAAAD 85
Query: 123 ARGKVFACRIQEAPQMITTCDVISARA 149
R V E P + D+I +A
Sbjct: 86 VRVDVRHGDAAEMPFPADSFDLIVCQA 112
>gi|242241524|ref|ZP_04795969.1| HemK family methyltransferase [Staphylococcus epidermidis W23144]
gi|242235067|gb|EES37378.1| HemK family methyltransferase [Staphylococcus epidermidis W23144]
Length = 278
Score = 37.0 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 8/77 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ FY K ++ L+ E+ + H +L D+G+G G I
Sbjct: 75 FQSFYGYQFKVNQHC-LIPRPETEEVML-HFL------ELCKKTDTIADIGTGSGAIAIT 126
Query: 89 TSIQLSSIEGGLVNLIE 105
+ + +L E
Sbjct: 127 LKLLQPELNVIATDLYE 143
>gi|50119842|ref|YP_049009.1| tellurite resistance protein TehB [Pectobacterium atrosepticum
SCRI1043]
gi|49610368|emb|CAG73812.1| putative tellurite resistance protein [Pectobacterium atrosepticum
SCRI1043]
Length = 286
Score = 37.0 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 34/109 (31%), Gaps = 20/109 (18%)
Query: 41 KKINLVSSSTVEDFW--IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG 98
KK L T + ++H+ P +DLG GGG + ++ G
Sbjct: 100 KKYGLT--QTHSEVINAVQHI-----------KPGKTLDLGCGGGRNSLYL-----NLRG 141
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V + + L ++Q A ++ D I +
Sbjct: 142 FDVTACDKHEQSIDSLNNIIQSEALENIRAGVYNINLAEIKEQYDFILS 190
>gi|291548148|emb|CBL21256.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
[Ruminococcus sp. SR1/5]
Length = 317
Score = 37.0 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 20/124 (16%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS------IQLSSIEGG 99
IR ++ + +D+G+G G GI+ + + ++
Sbjct: 153 TGMHETTQLVIR------QLKKFVKPGMEILDVGTGSGILGIVALKLGAGHVVGTDLDPC 206
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
V + S+NK+A+ + + +QE D+++A + L +
Sbjct: 207 AVPAV-SENKEANQIEEKSFDMMIGNIIDDKEVQEQVGY-EKYDIVTA------NILADV 258
Query: 160 SFPW 163
P
Sbjct: 259 LVPL 262
>gi|229102812|ref|ZP_04233508.1| Methyltransferase type 12 [Bacillus cereus Rock3-28]
gi|228680597|gb|EEL34778.1| Methyltransferase type 12 [Bacillus cereus Rock3-28]
Length = 300
Score = 37.0 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 36/124 (29%), Gaps = 12/124 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 9 LETY-----DWNSK--LTYLKNTRDLYYNDDYVSFLVNSVWKINKPVQIVDFGCGYGYLG 61
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + E ++ D+
Sbjct: 62 LVLMPLLPE--GSKYTGIDSGETLLAEARELFHLLPYESEFIEGDATEI-ELNDKYDIAI 118
Query: 147 ARAL 150
A
Sbjct: 119 CHAF 122
>gi|208780120|ref|ZP_03247463.1| hypothetical protein FTG_1123 [Francisella novicida FTG]
gi|208744124|gb|EDZ90425.1| hypothetical protein FTG_1123 [Francisella novicida FTG]
Length = 264
Score = 37.0 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 16/101 (15%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + RH+ DS F +D+G G G ++ +
Sbjct: 33 DHNETYGRHILDS---FSKFRGFKNVLDIGCGAGSDLLVVKKYNDKANLTGI-------- 81
Query: 110 KASFLRYVVQKTAARG-KVFACRIQEAPQMITT--CDVISA 147
F + +K + + I++ + D+I A
Sbjct: 82 --DFGNWNQEKLSKNNINLINLDIEKDKLPFESNHFDLIIA 120
>gi|170575415|ref|XP_001893231.1| ubiquinone biosynthesis O-methyltransferase family protein [Brugia
malayi]
gi|158600853|gb|EDP37910.1| ubiquinone biosynthesis O-methyltransferase family protein [Brugia
malayi]
Length = 367
Score = 37.0 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 15/103 (14%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEG--GLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
D+G GGG + + ++ V++I S + F R+ + + VF C
Sbjct: 181 HIADIGCGGGILTFPLARLGADVKAVDASVDVIASVETENRF-RH--ENCGSGNAVFKCS 237
Query: 132 IQE--APQMITTCDVISARA------LADLDTLLEYSFPWLYQ 166
E A + D + A +AD++ +E + +
Sbjct: 238 SVEVFAAENAGMFDAVV--ASEIIEHVADVELFVESCIQLVRK 278
>gi|320546792|ref|ZP_08041101.1| methyltransferase domain protein [Streptococcus equinus ATCC 9812]
gi|320448564|gb|EFW89298.1| methyltransferase domain protein [Streptococcus equinus ATCC 9812]
Length = 196
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 14/95 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ +SL +DLG G G I L+ ++G +++ N+ +
Sbjct: 49 LLNSL----EFNQGETLLDLGCGYG----PLGISLAKVQGIKPTMVDINNRAIDLAKQNA 100
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
K ++ I ++I T + + + RA
Sbjct: 101 NKNGVGADIYQSNI--YEKVIGTFNHVISNPPIRA 133
>gi|297190565|ref|ZP_06907963.1| methyltransferase type 11 [Streptomyces pristinaespiralis ATCC
25486]
gi|297150536|gb|EDY61787.2| methyltransferase type 11 [Streptomyces pristinaespiralis ATCC
25486]
Length = 381
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY--VVQKTAARGK 126
P +DLG G G +++ L+ G LV ++ LR+ V +
Sbjct: 4 LPDRPRVLDLGCGPG----RSALLLAERTGALVTAVDLHQPFLDELRHSAVARGVGDSIV 59
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ E P + D+I A
Sbjct: 60 TVHADMGELPFPDGSFDLIWA 80
>gi|268326470|emb|CBH40058.1| conserved hypothetical protein, SAM-dependent methyltransferase
type 11 family [uncultured archaeon]
Length = 256
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 12/88 (13%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G G I + + ++ + K+A + V+ + + K C ++
Sbjct: 56 VLDVGTGPGDIAIYLAEM--EHDVTGIDFSDEMLKRA---KGRVKNSNLQVKFDICDAED 110
Query: 135 APQMITTCDVISARALADLDTLLEYSFP 162
+ D + R L ++ P
Sbjct: 111 LYFEDESFDAVICR-------HLLWTLP 131
>gi|313126654|ref|YP_004036924.1| methyltransferase family protein [Halogeometricum borinquense DSM
11551]
gi|312293019|gb|ADQ67479.1| methyltransferase family protein [Halogeometricum borinquense DSM
11551]
Length = 479
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 15/112 (13%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V D L L P +D+G+G G P + L + +E A L ++
Sbjct: 148 VLDGLAERGLLPRVLRVLDVGAGTGGPALGLHDYLPENSLVEYHAVEPSA-SADVLEAML 206
Query: 119 QKTAARGKVFACRIQEAPQMI--------TTCDVISARALADLDTLLEYSFP 162
+T + K R + A D++ A + L E P
Sbjct: 207 SETRSNFKTTVHR-ETAEAFDPASVLPDGEGFDLVC---FA--NVLSELDDP 252
>gi|255071607|ref|XP_002499478.1| predicted protein [Micromonas sp. RCC299]
gi|226514740|gb|ACO60736.1| predicted protein [Micromonas sp. RCC299]
Length = 570
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 5/74 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D G G G + + Q + ++ + L + A R+
Sbjct: 312 TIVDFGCGTGNLLLPLAAQHPEAD---FVGLDLNPRSIDLLSARARDAGLAN--VAARVG 366
Query: 134 EAPQMITTCDVISA 147
+ CD+ A
Sbjct: 367 LIEEYEGRCDLALA 380
>gi|289208681|ref|YP_003460747.1| ubiquinone biosynthesis O-methyltransferase [Thioalkalivibrio sp.
K90mix]
gi|288944312|gb|ADC72011.1| ubiquinone biosynthesis O-methyltransferase [Thioalkalivibrio sp.
K90mix]
Length = 247
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 22/77 (28%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G ++ G V +++ + R +
Sbjct: 57 GKKVLDVGCGAGILSEAMAV-----RGAQVTALDAGAEHLEVAREHAHDSGLEIHYLHTT 111
Query: 132 IQ-EAPQMITTCDVISA 147
+ A DV++
Sbjct: 112 AEAHAEHHAGDYDVVTC 128
>gi|206973536|ref|ZP_03234454.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217960042|ref|YP_002338600.1| hypothetical protein BCAH187_A2648 [Bacillus cereus AH187]
gi|206747692|gb|EDZ59081.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217063542|gb|ACJ77792.1| conserved hypothetical protein [Bacillus cereus AH187]
Length = 233
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFAC 130
+DLGSG G I + IQ +S V+L++S K L+ ++ K
Sbjct: 53 VLDLGSGVGRNSIPIAQKIQNASGTVTCVDLLDSALTK---LQTYSKEYGVINNMKTEQA 109
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 110 AIENYYIQRNTYDYIV--AVSSLE 131
>gi|160914580|ref|ZP_02076795.1| hypothetical protein EUBDOL_00588 [Eubacterium dolichum DSM 3991]
gi|158433738|gb|EDP12027.1| hypothetical protein EUBDOL_00588 [Eubacterium dolichum DSM 3991]
Length = 198
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 6/89 (6%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +DLG G G G++ +I+ + + + +
Sbjct: 51 TICEREELGERVLDLGCGYGPVGVVLKKIYP---TKAFEMIDVNPRAVQLAKENICRNQL 107
Query: 124 RGKVFACRIQEAPQMITTCDVIS---ARA 149
V I E + D+I+ RA
Sbjct: 108 EADVHVSNIYEDLHQESYSDIITNPPIRA 136
>gi|222055564|ref|YP_002537926.1| methyltransferase type 11 [Geobacter sp. FRC-32]
gi|221564853|gb|ACM20825.1| Methyltransferase type 11 [Geobacter sp. FRC-32]
Length = 198
Score = 37.0 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 17/111 (15%)
Query: 59 VEDSL--------------RVFQLHPYPSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNL 103
DSL + +D+G G G I + + + V+L
Sbjct: 46 FIDSLPASVAESFCGVGNPLLAGKIRPGETVLDVGCGAGVDIIRAAGLAGPDGKVYGVDL 105
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLD 154
S ++A+ + + A + P DV+++ + +L
Sbjct: 106 TSSMVERAA--DNIKKMQIANAWAEEGAAESLPFPDKIFDVVTSNGVLNLS 154
>gi|333011350|gb|EGK30764.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
K-272]
gi|333012245|gb|EGK31627.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
K-227]
Length = 343
Score = 37.0 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|329577026|gb|EGG58501.1| hypothetical protein HMPREF9520_01164 [Enterococcus faecalis
TX1467]
Length = 89
Score = 37.0 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 3/33 (9%), Positives = 13/33 (39%)
Query: 7 NSILRANYLLNTYNVSRETLEKLEYFYFLFLKW 39
R ++ + + + + ++ L ++W
Sbjct: 56 PEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEW 88
>gi|237811337|ref|YP_002895788.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
MSHR346]
gi|237504064|gb|ACQ96382.1| methlytransferase, UbiE/COQ5 family [Burkholderia pseudomallei
MSHR346]
Length = 251
Score = 37.0 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARGGAH----EVIAYDLAPQMPATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D I +R
Sbjct: 98 AAERLPFADASFDWIVSR 115
>gi|225024851|ref|ZP_03714043.1| hypothetical protein EIKCOROL_01739 [Eikenella corrodens ATCC
23834]
gi|224942380|gb|EEG23589.1| hypothetical protein EIKCOROL_01739 [Eikenella corrodens ATCC
23834]
Length = 240
Score = 37.0 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 19/133 (14%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-----PSI 74
NV ++K + W+ +F H + LR+ + +
Sbjct: 7 NVDAAEIDKFSRLAAQW--WNP---------EGEFKSLHEINPLRLGFIREHSGGLTGKN 55
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + +I + + +++ E + A + +
Sbjct: 56 VLDVGCGGGI--LSEAIAREAAQATGIDMAEKSLQVAQAHAEQQGLANLHYRCISVEALA 113
Query: 135 APQMITTCDVISA 147
A Q DV++
Sbjct: 114 AEQPAA-YDVVTC 125
>gi|194767701|ref|XP_001965953.1| GF11802 [Drosophila ananassae]
gi|190619796|gb|EDV35320.1| GF11802 [Drosophila ananassae]
Length = 520
Score = 37.0 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G I SI S V I++ + + + V + ++
Sbjct: 247 NGKAVLDVGCGTG----ILSIFASQAGAARVVGIDNSDIVYTAMDIVRKNKVQNVQLVKG 302
Query: 131 RIQEAPQMITTCDVISA 147
R+++ D+I +
Sbjct: 303 RLEDTELPEAKYDIIIS 319
>gi|83719907|ref|YP_441426.1| UbiE/COQ5 family methlytransferase [Burkholderia thailandensis
E264]
gi|167618300|ref|ZP_02386931.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
thailandensis Bt4]
gi|257139899|ref|ZP_05588161.1| UbiE/COQ5 family methlytransferase [Burkholderia thailandensis
E264]
gi|83653732|gb|ABC37795.1| methlytransferase, UbiE/COQ5 family [Burkholderia thailandensis
E264]
Length = 251
Score = 37.0 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+L + +DLG G G + V + + + + +
Sbjct: 30 LDTLAAEIGATPGARVLDLGCGAGHASFAAA----RGGATEVIAYDLAPQMLATVEAAAR 85
Query: 120 KTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+ ++ + P + D I +R
Sbjct: 86 ERGLASVRIEQGAAERLPFADASFDWIVSR 115
>gi|269216929|ref|ZP_06160783.1| methyltransferase domain protein [Slackia exigua ATCC 700122]
gi|269129736|gb|EEZ60820.1| methyltransferase domain protein [Slackia exigua ATCC 700122]
Length = 279
Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 21/74 (28%), Gaps = 5/74 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G G G G+ + G V I+ K R R F
Sbjct: 68 RVLDIGCGSGIYGLALA-----SRVGEVVGIDISPKMIEAAREKACALDVRNVRFVQSDF 122
Query: 134 EAPQMITTCDVISA 147
D++ A
Sbjct: 123 RDMAFDEGFDLVFA 136
>gi|262066708|ref|ZP_06026320.1| methyltransferase [Fusobacterium periodonticum ATCC 33693]
gi|291379507|gb|EFE87025.1| methyltransferase [Fusobacterium periodonticum ATCC 33693]
Length = 514
Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 27/89 (30%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
LR+ + +++G G I +I+ V ++ + ++
Sbjct: 37 LRLLDFISPNLKNAKVLEIGCSFGGNIIPFAIENPE---ATVVGVDLSKVQVDEGNKIID 93
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISA 147
+ ++ I + + D I
Sbjct: 94 FLGLKNIRIHHKNILDYNEDFEQFDYIIC 122
>gi|196229475|ref|ZP_03128340.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Chthoniobacter flavus Ellin428]
gi|196226707|gb|EDY21212.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Chthoniobacter flavus Ellin428]
Length = 275
Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G+G G + + + V ++ + R + G+V
Sbjct: 111 AKRVLDIGTGSGVIALTLATAWPEAQ---VEAVDLSPDALALARENAARLELAGRVQFLA 167
Query: 132 IQEAPQMITTCDVISA 147
+ D+I A
Sbjct: 168 SDLLASVTGEYDLIVA 183
>gi|169351743|ref|ZP_02868681.1| hypothetical protein CLOSPI_02524 [Clostridium spiroforme DSM 1552]
gi|169291965|gb|EDS74098.1| hypothetical protein CLOSPI_02524 [Clostridium spiroforme DSM 1552]
Length = 197
Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +D+G G G GI +E +++I+ ++ + R ++
Sbjct: 49 LETISIDSSKKTLLDVGCGYGTFGIALKSVYPFLE---IDMIDINDRALNLARENLKLNN 105
Query: 123 ARGKVFACRIQEAPQMITTCDVIS 146
V+ ++ D+I
Sbjct: 106 VNANVYLSN--TYEKVENKYDLIV 127
>gi|117164477|emb|CAJ88023.1| putative SAM-dependent methyltransferase [Streptomyces ambofaciens
ATCC 23877]
Length = 217
Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 12/91 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P+ +D+G G G + + G V ++ K + ++ G+
Sbjct: 47 PASVLDVGCGTGSLSRLVAEA-----GHQVTGVDLAPKMVEQAQGKLRAAGLEGRFLIGD 101
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P DV+ +R L ++ P
Sbjct: 102 AADPPTGDERYDVLLSR-------HLVWTLP 125
>gi|33591872|ref|NP_879516.1| heme biosynthesis protein [Bordetella pertussis Tohama I]
gi|33571516|emb|CAE40990.1| heme biosynthesis protein [Bordetella pertussis Tohama I]
gi|332381289|gb|AEE66136.1| heme biosynthesis protein [Bordetella pertussis CS]
Length = 270
Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+DLG+G G + ++ E V + + Q+ AR + A
Sbjct: 107 RVLDLGTGSGAIAVSVALGCPQAE---VTATDLSAAALAVAEGNAQRLGARVRCLAGDWY 163
Query: 134 EAPQMITTCDVISA 147
EA D+I +
Sbjct: 164 EALPAQDRYDLIVS 177
>gi|320106604|ref|YP_004182194.1| type 11 methyltransferase [Terriglobus saanensis SP1PR4]
gi|319925125|gb|ADV82200.1| Methyltransferase type 11 [Terriglobus saanensis SP1PR4]
Length = 277
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 5/78 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P S +D+ G G I + +G +V ++ R
Sbjct: 44 LPPESRVLDVACGTGNLAIPLA-----RQGCVVTGVDIAPNLLVQARERAAAEGLTVSFD 98
Query: 129 ACRIQEAPQMITTCDVIS 146
+E P T D +
Sbjct: 99 EGDAEELPYDDETFDAVV 116
>gi|228958481|ref|ZP_04120201.1| Methyltransferase type 12 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228801108|gb|EEM48005.1| Methyltransferase type 12 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 293
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 17/136 (12%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 2 LETY-----DWNNK--LTYLKNTRDLYYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLG 54
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + + E ++ D+
Sbjct: 55 LVLMPLLPE--GSKYTGIDSGETLLAEARELFRLLPYDSECLEGDATEI-ELNDKYDIAI 111
Query: 147 ARALADLDTLLEYSFP 162
A LL + P
Sbjct: 112 CHAF-----LLHMTTP 122
>gi|259908617|ref|YP_002648973.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|224964239|emb|CAX55746.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|283478590|emb|CAY74506.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Erwinia pyrifoliae DSM 12163]
Length = 281
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L +DLG+G G + + + + V I+ + ++ +
Sbjct: 102 ALAHLPVAAGSILDLGTGSGAIALALASERPDCQ---VIGIDRIPAAVALAQHNAARLGL 158
Query: 124 RGKVF 128
F
Sbjct: 159 TNATF 163
>gi|254390133|ref|ZP_05005353.1| O-methyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|294817124|ref|ZP_06775766.1| SAM-dependent methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|326445983|ref|ZP_08220717.1| O-methyltransferase family protein [Streptomyces clavuligerus ATCC
27064]
gi|197703840|gb|EDY49652.1| O-methyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|294321939|gb|EFG04074.1| SAM-dependent methyltransferase [Streptomyces clavuligerus ATCC
27064]
Length = 381
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 9/98 (9%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SK 107
+ + H+ S V +L P + +D G G I + + V ++E +
Sbjct: 169 RSWSEMANHHLV-S-HVTELAP--TRLLDCGGGDAVNAIALATASPDL---TVTILEIPQ 221
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
+ + R V R V A + A + DV+
Sbjct: 222 TARIAERRIVEAGLEERIHVHAGDM-HAAEFPGGFDVV 258
>gi|148270523|ref|YP_001244983.1| methyltransferase type 11 [Thermotoga petrophila RKU-1]
gi|147736067|gb|ABQ47407.1| Methyltransferase type 11 [Thermotoga petrophila RKU-1]
Length = 248
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 15/95 (15%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + P +DLG G G + G V L++ + + V ++ +
Sbjct: 36 LEEYLKNPCRVLDLGGGTGKWSLFL-----QERGFEVVLVDP----SKEMLEVAREKGVK 86
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
V A R ++ P + + A L +L Y
Sbjct: 87 NVVEA-RAEDLPFPSGAFEAVLA-----LGDVLSY 115
>gi|313157194|gb|EFR56624.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Alistipes sp. HGB5]
Length = 280
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 11/90 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ Q + +D+G+G G ++ L + ++ + + L +
Sbjct: 101 AWIAQAKTEAATLLDVGTGSGCIAATLALALPGAQVYAADISD------TALETAARNCR 154
Query: 123 ARGKVFACRIQE-----APQMITTCDVISA 147
A G R + A DVI +
Sbjct: 155 ALGAGVILRKADALSDLAEVFPGPFDVIVS 184
>gi|331681354|ref|ZP_08381991.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli H299]
gi|331081575|gb|EGI52736.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli H299]
Length = 343
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|301022273|ref|ZP_07186171.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
gi|299881323|gb|EFI89534.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
Length = 343
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSRDGLDVGSQLMLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|229495591|ref|ZP_04389324.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
35406]
gi|229317574|gb|EEN83474.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
35406]
Length = 184
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVF 128
+ +DL +G G G+ + + + V+++E + K+ +F++ V++ A V
Sbjct: 43 EGARILDLFAGTGSIGLEFASRGAEW----VDMVEKQPKQVAFIQSVIKALHAEEEATVH 98
Query: 129 ACRIQ-----EAPQMITTCDVISA 147
+ E T D+I A
Sbjct: 99 VGNVFKWLTPETGSSSTPYDLIFA 122
>gi|229099761|ref|ZP_04230686.1| Protein hemK [Bacillus cereus Rock3-29]
gi|228683650|gb|EEL37603.1| Protein hemK [Bacillus cereus Rock3-29]
Length = 283
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEKLHVADIGTGSGAISITLALENKNLH---VYTVDIARESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + ++ DV+ +
Sbjct: 154 KENAKSLGAEVTFYHGDLLSPFYKIDQKLDVVVS 187
>gi|146318503|ref|YP_001198215.1| methylase of polypeptide chain release factors [Streptococcus suis
05ZYH33]
gi|146320694|ref|YP_001200405.1| methylase of polypeptide chain release factors [Streptococcus suis
98HAH33]
gi|253751629|ref|YP_003024770.1| methyltransferase [Streptococcus suis SC84]
gi|253753531|ref|YP_003026672.1| methyltransferase [Streptococcus suis P1/7]
gi|253755644|ref|YP_003028784.1| methyltransferase [Streptococcus suis BM407]
gi|145689309|gb|ABP89815.1| Methylase of polypeptide chain release factors [Streptococcus suis
05ZYH33]
gi|145691500|gb|ABP92005.1| Methylase of polypeptide chain release factors [Streptococcus suis
98HAH33]
gi|251815918|emb|CAZ51532.1| putative methyltransferase [Streptococcus suis SC84]
gi|251818108|emb|CAZ55902.1| putative methyltransferase [Streptococcus suis BM407]
gi|251819777|emb|CAR45684.1| putative methyltransferase [Streptococcus suis P1/7]
gi|292558284|gb|ADE31285.1| Modification methylase HemK [Streptococcus suis GZ1]
gi|319758067|gb|ADV70009.1| methylase of polypeptide chain release factors [Streptococcus suis
JS14]
Length = 277
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G G I + E V ++ N + + + +
Sbjct: 112 RILDIGTGSGAIAISLAKARPDWE---VVAVDISNDALAVAQENARTNQVSVHFLESDVL 168
Query: 134 EAPQMITTCDVISA 147
+A + D+I +
Sbjct: 169 QA--VTGKFDIIVS 180
>gi|167031790|ref|YP_001667021.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida GB-1]
gi|166858278|gb|ABY96685.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Pseudomonas putida GB-1]
Length = 276
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+L P P+ +DLG+G G + + + + V ++ + A+ Q+
Sbjct: 100 TALELQPAAPAKVLDLGTGTGAIALALASDRPAWQ---VTAVDRVEEAAALAERNRQRLG 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
D+I +
Sbjct: 157 LDNAQVRVSHWFDSLAGERFDLIVS 181
>gi|326492281|dbj|BAK01924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
H + +D+G+G G I +I + V +E+ N A R +V+
Sbjct: 61 PHHFRGKVVLDVGTGSG----ILAIWSAQAGARKVYAVEATN-VAEHARELVRANGVADI 115
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+V +++ + DVI +
Sbjct: 116 VEVIQGTMEDIV-LPEKVDVIIS 137
>gi|323964711|gb|EGB60182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli M863]
gi|327253902|gb|EGE65531.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli STEC_7v]
Length = 277
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAIAL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQNLAIKNIHI 163
>gi|323143280|ref|ZP_08077973.1| methyltransferase domain protein [Succinatimonas hippei YIT 12066]
gi|322416961|gb|EFY07602.1| methyltransferase domain protein [Succinatimonas hippei YIT 12066]
Length = 241
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G G GF I+ + G V I+ + + K+ IQ
Sbjct: 55 LDIGCGPGFFSILLA-----KSGFKVTGIDLSITMLTKASELAAYHKVNLKLIKGDIQNP 109
Query: 136 PQMITTCDVISARALA-DLDTL 156
P + D+I +R + +L L
Sbjct: 110 PFAPASFDLIVSRNVFWNLPDL 131
>gi|322376393|ref|ZP_08050886.1| methyltransferase domain protein [Streptococcus sp. M334]
gi|321282200|gb|EFX59207.1| methyltransferase domain protein [Streptococcus sp. M334]
Length = 196
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G G+ + G +++ N+ R ++ +F
Sbjct: 55 VNQGETVLDVGCGYGTLGLSLAKAY----GVQATMVDINNRALDLARQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 111 QSNI--YEQVEGKFDHVISNPPIRA 133
>gi|288817446|ref|YP_003431793.1| ribosomal protein L11 methyltransferase [Hydrogenobacter
thermophilus TK-6]
gi|288786845|dbj|BAI68592.1| ribosomal protein L11 methyltransferase [Hydrogenobacter
thermophilus TK-6]
gi|308751053|gb|ADO44536.1| Methyltransferase type 11 [Hydrogenobacter thermophilus TK-6]
Length = 241
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 8/87 (9%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
SL + + ID+G G G I + L + V I+ +
Sbjct: 101 SLMLIEEFFKRGWSAIDVGCGSG----ILAFALKKLSARKVLAIDIDERAIEECEKNASL 156
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
+ + ++ + D + A
Sbjct: 157 NRLKITCLKAKPEDIK---ESFDFLVA 180
>gi|229196768|ref|ZP_04323510.1| hypothetical protein bcere0001_23240 [Bacillus cereus m1293]
gi|228586676|gb|EEK44752.1| hypothetical protein bcere0001_23240 [Bacillus cereus m1293]
Length = 160
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFAC 130
+DLGSG G I + IQ +S V+L++S K L+ ++ K+
Sbjct: 53 VLDLGSGVGRNSIPIAQKIQNASGTVTCVDLLDSALTK---LQTYSKEYGVINNIKIEQV 109
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 110 AIENYYIQRNTYDYIV--AVSSLE 131
>gi|254459389|ref|ZP_05072810.1| methyltransferase small [Campylobacterales bacterium GD 1]
gi|207084002|gb|EDZ61293.1| methyltransferase small [Campylobacterales bacterium GD 1]
Length = 231
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 35/92 (38%), Gaps = 11/92 (11%)
Query: 61 DSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+ ++ +D+G+G G G++ + ++ +E+ K+ +F+ Y
Sbjct: 15 DSVFLYDFIDSFNPKGRVLDVGAGCGIVGLLVARDNPKVK------LEAVEKQEAFVEYA 68
Query: 118 VQKTAARGKVFACRIQEAPQMIT--TCDVISA 147
+ + + ++ D I +
Sbjct: 69 TINSRVNKIDYKIHKNDFVELDENIKYDYIIS 100
>gi|123983132|gb|ABM83307.1| protein arginine methyltransferase 8 [synthetic construct]
gi|123997835|gb|ABM86519.1| protein arginine methyltransferase 8 [synthetic construct]
Length = 334
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + + +++
Sbjct: 41 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSQKIIKA 95
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 96 NHLDNIITIFKGKVEEVELPVEKVDIIIS 124
>gi|73909077|gb|AAH22458.2| Protein arginine methyltransferase 8 [Homo sapiens]
Length = 394
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSQKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|313893654|ref|ZP_07827222.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella sp. oral taxon 158 str. F0412]
gi|313441798|gb|EFR60222.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella sp. oral taxon 158 str. F0412]
Length = 195
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
SI +D+G+G G I ++ G V IE +K + ++K V
Sbjct: 34 IEEDSIVLDVGAGTGSISIEAALAAPK---GHVYAIERFDKGIDLINENMKKFNVNNMTV 90
Query: 128 FACRIQEAPQMITTCDVIS 146
+ E + + D +
Sbjct: 91 IKSKAPEGMEELPELDAVI 109
>gi|296876352|ref|ZP_06900404.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
gi|296432642|gb|EFH18437.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
Length = 197
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 19/139 (13%)
Query: 19 YNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--SLRVFQLHPY--PSI 74
++V+ + + + L +K+N T + + + D S + +
Sbjct: 6 FDVNPDAAHDIHDLAVVLL--GQKMN---FYTDAGVFSKKMIDYGSQVLLSTLDFQEGES 60
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G G G + L+ +G V +++ + + + ++F+ + E
Sbjct: 61 VLDVGCGYG----PIGLSLTKAQGVAVTMVDVNERALDLAKKNASRNGVEAQIFSSDVYE 116
Query: 135 APQMITTCDVISA----RA 149
A + D + + RA
Sbjct: 117 AVE--GVFDHVISNPPIRA 133
>gi|312110955|ref|YP_003989271.1| methyltransferase type 11 [Geobacillus sp. Y4.1MC1]
gi|311216056|gb|ADP74660.1| Methyltransferase type 11 [Geobacillus sp. Y4.1MC1]
Length = 266
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +L P + +DLG G GF + + E G V ++ + S R K
Sbjct: 72 LAIAELKP-GEVVLDLGCGAGFDCFLAA--RQVGETGRVIGVDMTPEMISKARNNAAKGG 128
Query: 123 ARGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P + DVI +
Sbjct: 129 FTNTEFRLGEIEYLPVADGSVDVIIS 154
>gi|197305105|pdb|3DLC|A Chain A, Crystal Structure Of A Putative
S-Adenosyl-L-Methionine-Dependent Methyltransferase
(Mmp1179) From Methanococcus Maripaludis At 1.15 A
Resolution
Length = 219
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQK-TAARGKVFA 129
ID+GSG G SI L+ + ++ SK+ L+ + R ++
Sbjct: 44 AGTCIDIGSGPG----ALSIALAKQSDFSIRALDFSKHXNEIALKNIADANLNDRIQIVQ 99
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P D+I +R
Sbjct: 100 GDVHNIPIEDNYADLIVSR 118
>gi|218778721|ref|YP_002430039.1| methyltransferase type 12 [Desulfatibacillum alkenivorans AK-01]
gi|218760105|gb|ACL02571.1| Methyltransferase type 12 [Desulfatibacillum alkenivorans AK-01]
Length = 280
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 9/78 (11%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+D+G+G G + + + LV +E L+ ++Q + R
Sbjct: 67 RILDIGAGPGILAVPLA-----KQAELVTAVEPAAGMIQRLKEIIQTNNISNLSIVEKRW 121
Query: 133 QEAP---QMITTCDVISA 147
++ + D +
Sbjct: 122 EDVDLESDLQGPYDAVVC 139
>gi|91228318|ref|ZP_01262247.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
12G01]
gi|91188134|gb|EAS74437.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
12G01]
Length = 341
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 8/104 (7%)
Query: 47 SSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ ++ + D S + + P +D G G G G + I + +
Sbjct: 173 AVKSLPGVFSHGEFDLGSRLLLETLPKLSGKVLDFGCGAGVLGAFMAKANPEI---AIEM 229
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + ++ G+VFA I I +
Sbjct: 230 CDINAYAITSSQATLEANGLSGRVFASDI--YSDTEKDYRFIVS 271
>gi|56419127|ref|YP_146445.1| arsenite S-adenosylmethyltransferase [Geobacillus kaustophilus
HTA426]
gi|56378969|dbj|BAD74877.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 264
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +L+P + +DLG G GF + + E G V ++ + S R K
Sbjct: 72 LAIAELNP-GDVVLDLGCGAGFDCFLAA--RQVGETGRVIGVDMTPEMISKARNNAAKGG 128
Query: 123 ARGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P + DVI +
Sbjct: 129 FTNTEFRLGEIEYLPVADGSVDVIIS 154
>gi|54308160|ref|YP_129180.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Photobacterium profundum SS9]
gi|46912588|emb|CAG19378.1| putative adenine-specific methylase [Photobacterium profundum SS9]
Length = 310
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P+ +DL +G G GI + E V+L++ + +Q +V
Sbjct: 129 LQQAPTRIMDLCTGSGCIGIACAHAFPEAE---VDLVDISIDALAVAEQNIQDHGLEQQV 185
Query: 128 FACR---IQEAPQMITTCDVIS 146
R +++ P+ D+I
Sbjct: 186 IPLRSDLLRDVPK--DKYDLIV 205
>gi|325568364|ref|ZP_08144731.1| protein-(glutamine-N5) methyltransferase [Enterococcus
casseliflavus ATCC 12755]
gi|325158133|gb|EGC70286.1| protein-(glutamine-N5) methyltransferase [Enterococcus
casseliflavus ATCC 12755]
Length = 285
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ + L P +D+G+G G I + V+L
Sbjct: 91 LIPRPETEELVE----NCLAKLP-ADQPLRVVDIGTGTGAIAIALKLARPQWSVSAVDL- 144
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + A + F E P D+I +
Sbjct: 145 --SAEALAVAKENATALGAEIRFFQGDTLE-PVADQQWDLIVS 184
>gi|332716307|ref|YP_004443773.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium sp.
H13-3]
gi|325062992|gb|ADY66682.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium sp.
H13-3]
Length = 248
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + V + K +++ A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARMGAD-----VVGADPSEKNIGIASTHARESGVSVDYRAL 118
Query: 131 RIQEAPQMITTCDVI 145
++ + T DV+
Sbjct: 119 TAEQLLEAGETFDVV 133
>gi|229085536|ref|ZP_04217772.1| hypothetical protein bcere0022_21470 [Bacillus cereus Rock3-44]
gi|228697757|gb|EEL50506.1| hypothetical protein bcere0022_21470 [Bacillus cereus Rock3-44]
Length = 196
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 74 IWIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLGSG G I + I + + V+L++S K A ++
Sbjct: 14 KVLDLGSGVGRNSIPIAQKIFDNGGKVTCVDLLDSALTKLKENSKEHHVLDA-IEIIKTE 72
Query: 132 IQEAPQMITTCDVISARALADLD 154
I+ + D I A++ L+
Sbjct: 73 IENYDIHPESYDYIV--AVSSLE 93
>gi|218660929|ref|ZP_03516859.1| methyltransferase type 12 [Rhizobium etli IE4771]
Length = 339
Score = 36.6 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V + + D+G G G ++ + + + ++ K R V +
Sbjct: 153 VVEKLKAGARVADVGCGHGHSTVLMAQAFPKSK---FHGFDTHEKSVDEAREVAGEAGVS 209
Query: 125 GKVF--ACRIQEAPQMITTCDVI 145
+ R + P T D+I
Sbjct: 210 DRATFSTARAETYPG--TGYDLI 230
>gi|326335033|ref|ZP_08201233.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325692838|gb|EGD34777.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length = 281
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G+G G I L V ++ K + ++
Sbjct: 113 PLQILDIGTGSGVIAIALKKYLPE---ATVFALDISEKALEVAQRNAKENKVSVHFLQED 169
Query: 132 IQEAPQMITTCDVISA 147
I + + D+I +
Sbjct: 170 ILKVTHLGRIFDIIVS 185
>gi|307175674|gb|EFN65562.1| Probable protein arginine N-methyltransferase 6.1 [Camponotus
floridanus]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--F 128
I +D+G+G G I SI + + V +E+ + V+ + + V
Sbjct: 39 QGKIVMDVGAGSG----ILSIFCAQVGAKKVYAVEASML-VKTIEQVLIENNIQNTVEII 93
Query: 129 ACRIQEA-PQMITTCDVISA 147
++++ P + D+I +
Sbjct: 94 HSKVEDIDPNSLEKVDIIIS 113
>gi|301330281|ref|ZP_07222935.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
gi|300843740|gb|EFK71500.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|269966937|ref|ZP_06181009.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
40B]
gi|269828420|gb|EEZ82682.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
40B]
Length = 341
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 8/104 (7%)
Query: 47 SSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ ++ + D S + + P +D G G G G + I + +
Sbjct: 173 AVKSLPGVFSHGEFDLGSRLLLETLPKLSGKVLDFGCGAGVLGAFMAKANPEI---AIEM 229
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + ++ G+VFA I I +
Sbjct: 230 CDINAYAITSSQATLEANGLSGRVFASDI--YSDTAKDYRFIVS 271
>gi|271499905|ref|YP_003332930.1| type 11 methyltransferase [Dickeya dadantii Ech586]
gi|270343460|gb|ACZ76225.1| Methyltransferase type 11 [Dickeya dadantii Ech586]
Length = 265
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 8/94 (8%)
Query: 57 RHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH+ + + + P ++ +D+G+G GF + ++ G V ++ +
Sbjct: 47 RHLWQT-TILRHAPKKAVLNILDVGTGPGFFAVTLAMA-----GHNVTAVDVTPAMLAQA 100
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
R ++ A + P D++ R
Sbjct: 101 RNNAAHYGVDIRLVATDVHTLPFPDNHFDLLVTR 134
>gi|229118824|ref|ZP_04248173.1| Protein hemK [Bacillus cereus Rock1-3]
gi|228664625|gb|EEL20118.1| Protein hemK [Bacillus cereus Rock1-3]
Length = 283
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
RH D+G+G G I +++ ++ V ++ +
Sbjct: 106 IERHF---------GNEKLHVADIGTGSGAISITLALENKNLH---VYTVDIARESIEVA 153
Query: 115 RYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + A + + ++ DV+ +
Sbjct: 154 KENAKSLGAEVTFYHGDLLSPFYKIDQKLDVVVS 187
>gi|215489682|ref|YP_002332113.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O127:H6 str. E2348/69]
gi|215267754|emb|CAS12216.1| 16S rRNA m2G1207 methylase [Escherichia coli O127:H6 str. E2348/69]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|218234037|ref|YP_002366901.1| hypothetical protein BCB4264_A2184 [Bacillus cereus B4264]
gi|218161994|gb|ACK61986.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 293
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 17/136 (12%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 2 LETY-----DWNNK--LTYLKNTRDLYYNDDYVSFLVNTVWKITKPVHMVDYGCGYGYLG 54
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + + E ++ D+
Sbjct: 55 LVLMPLLPE--GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI 111
Query: 147 ARALADLDTLLEYSFP 162
A LL + P
Sbjct: 112 CHAF-----LLHMTTP 122
>gi|115478763|ref|NP_001062975.1| Os09g0359800 [Oryza sativa Japonica Group]
gi|122228135|sp|Q0J2C6|ANM1_ORYSJ RecName: Full=Probable protein arginine N-methyltransferase 1
gi|152013348|sp|A2Z0C0|ANM1_ORYSI RecName: Full=Probable protein arginine N-methyltransferase 1
gi|113631208|dbj|BAF24889.1| Os09g0359800 [Oryza sativa Japonica Group]
gi|125563401|gb|EAZ08781.1| hypothetical protein OsI_31042 [Oryza sativa Indica Group]
gi|215704683|dbj|BAG94311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 387
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-- 125
I +D+G+G G I S+ + V IE A + +V+
Sbjct: 101 FLFKDKIVLDVGAGTG----ILSLFCAKAGAKHVYAIECSQM-ADMAKEIVKTNGYSNVI 155
Query: 126 KVFACRIQEAPQMITTCDVISA 147
V +++E + DVI +
Sbjct: 156 TVIKGKVEEIELPVPKVDVIIS 177
>gi|48716647|dbj|BAD23315.1| putative protein-arginine N-methyltransferase [Oryza sativa
Japonica Group]
Length = 306
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-- 125
I +D+G+G G I S+ + V IE A + +V+
Sbjct: 20 FLFKDKIVLDVGAGTG----ILSLFCAKAGAKHVYAIECSQM-ADMAKEIVKTNGYSNVI 74
Query: 126 KVFACRIQEAPQMITTCDVISA 147
V +++E + DVI +
Sbjct: 75 TVIKGKVEEIELPVPKVDVIIS 96
>gi|193070621|ref|ZP_03051559.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
E110019]
gi|192956104|gb|EDV86569.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
E110019]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|331270482|ref|YP_004396974.1| precorrin-6Y C5,15-methyltransferase subunit CbiT [Clostridium
botulinum BKT015925]
gi|329127032|gb|AEB76977.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Clostridium botulinum BKT015925]
Length = 188
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 12/102 (11%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
S T E+ I L + ++ S +D+GSG G I + + G V IE
Sbjct: 14 SPMTKEEIRI------LSISKMNINENSRILDIGSGTGSISIQLA---KISKNGEVIAIE 64
Query: 106 SKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMI-TTCDVI 145
+ K + +K A +V E I + I
Sbjct: 65 KEQKAIDLINKNKEKFEANNLEVVKGEALEVYDHIDGEFNAI 106
>gi|304385471|ref|ZP_07367816.1| methyltransferase domain protein [Pediococcus acidilactici DSM
20284]
gi|304328678|gb|EFL95899.1| methyltransferase domain protein [Pediococcus acidilactici DSM
20284]
Length = 201
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 10/93 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L S +D+G G G GI + Q V + + + + +
Sbjct: 50 LEALPLDVPQSSILDVGCGYGPMGIALAKQFPEAR---VEMTDVNERALALAERNAEANG 106
Query: 123 A--RGKVFACRIQEAPQMITTCDVISA----RA 149
R +V+ EA T + + RA
Sbjct: 107 VAARTRVYHSDAYEAVA-KTDFTTVVSNPPVRA 138
>gi|294011099|ref|YP_003544559.1| putative methyltransferase [Sphingobium japonicum UT26S]
gi|292674429|dbj|BAI95947.1| putative methyltransferase [Sphingobium japonicum UT26S]
Length = 274
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 13/108 (12%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D++ +D+G GF SI++ V I+S ++ + R+
Sbjct: 53 FADAI---PEDLSGKSVLDIGCNAGF----YSIEMKRRGAAEVLGIDSDDRYLAQARFAA 105
Query: 119 QKTAARGKVF-ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ G F + + ++ D++ + L P L
Sbjct: 106 EALGHDGIEFRNLSVYDVGKLGRRFDLVIF-----MGVLYHLRHPLLA 148
>gi|269114935|ref|YP_003302698.1| Protoporphinogen oxydase HEMK [Mycoplasma hominis]
gi|268322560|emb|CAX37295.1| Protoporphinogen oxydase HEMK [Mycoplasma hominis ATCC 23114]
Length = 235
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 6/85 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + S +DLG G G G+ + V L + + +
Sbjct: 66 LAAYPFIKKESKVLDLGCGSGLIGLAIK----KNKDANVTLSDISRFAIKQTKINAKLNN 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
V R ++ + DVI
Sbjct: 122 LNVNVI--RSNWFNKITSKFDVIVC 144
>gi|289577388|ref|YP_003476015.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter italicus Ab9]
gi|289527101|gb|ADD01453.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter italicus Ab9]
Length = 279
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 43/159 (27%), Gaps = 36/159 (22%)
Query: 12 ANYLLNTYNVSRETLEKLEYF---------------------YFLFLKWSKKINLVSSST 50
A +L VS+E LE+ F F+ + I
Sbjct: 39 ALFLRREEEVSKEQLERFLEFINMRKSHIPYQYIVKKQCFMGLEFFVDENVLI----PRP 94
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ + + + +D+G+G G + + V ++ K
Sbjct: 95 ETEILVE------EALKRLKRGDVVLDIGTGSGAIAVSIAKYFPDC---TVYAVDISKKA 145
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMIT--TCDVISA 147
++ +K ++F + D I +
Sbjct: 146 IEIAKHNAEKQGVLDRIFFIESDLFCNLPPNLKFDFIVS 184
>gi|239623106|ref|ZP_04666137.1| methyltransferase type 11 [Clostridiales bacterium 1_7_47_FAA]
gi|239522473|gb|EEQ62339.1| methyltransferase type 11 [Clostridiales bacterium 1_7_47FAA]
Length = 253
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--K 120
L F + +DLG+G G I + + EG +E + + A R V+
Sbjct: 45 LSGFAVVKKGERMLDLGTGTGI--IPI-LLTAKTEGEHFTGLEIQEESADMARRSVRYNH 101
Query: 121 TAARGKVFACRIQEAPQMI--TTCDVISA 147
+ + I EA Q+ + DV+++
Sbjct: 102 LEEKVDIVTGDIVEASQLFALASFDVVTS 130
>gi|218708048|ref|YP_002415567.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
UMN026]
gi|293403039|ref|ZP_06647136.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
FVEC1412]
gi|298378566|ref|ZP_06988450.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
FVEC1302]
gi|300899328|ref|ZP_07117593.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
gi|301027007|ref|ZP_07190391.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
gi|226712948|sp|B7NH38|RSMC_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|218435145|emb|CAR16103.1| 16S RNA m2G1207 methylase [Escherichia coli UMN026]
gi|291429954|gb|EFF02968.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
FVEC1412]
gi|298280900|gb|EFI22401.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
FVEC1302]
gi|300357063|gb|EFJ72933.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
gi|300395231|gb|EFJ78769.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|15804942|ref|NP_290984.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O157:H7 EDL933]
gi|15834583|ref|NP_313356.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O157:H7 str. Sakai]
gi|168750994|ref|ZP_02776016.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4113]
gi|168766650|ref|ZP_02791657.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4486]
gi|168776653|ref|ZP_02801660.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4196]
gi|168781658|ref|ZP_02806665.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4076]
gi|168785012|ref|ZP_02810019.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC869]
gi|168797941|ref|ZP_02822948.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC508]
gi|195937642|ref|ZP_03083024.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O157:H7 str. EC4024]
gi|208806907|ref|ZP_03249244.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4206]
gi|208814485|ref|ZP_03255814.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4045]
gi|208819277|ref|ZP_03259597.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4042]
gi|209398157|ref|YP_002273891.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4115]
gi|217326219|ref|ZP_03442303.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. TW14588]
gi|254796366|ref|YP_003081203.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O157:H7 str. TW14359]
gi|261226727|ref|ZP_05941008.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256889|ref|ZP_05949422.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. FRIK966]
gi|81764381|sp|Q8X510|RSMC_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712940|sp|B5Z4Q2|RSMC_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|12519394|gb|AAG59551.1|AE005668_6 putative enzyme [Escherichia coli O157:H7 str. EDL933]
gi|13364807|dbj|BAB38752.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
O157:H7 str. Sakai]
gi|187768028|gb|EDU31872.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4196]
gi|188014927|gb|EDU53049.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4113]
gi|189000759|gb|EDU69745.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4076]
gi|189364171|gb|EDU82590.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4486]
gi|189375045|gb|EDU93461.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC869]
gi|189379587|gb|EDU98003.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC508]
gi|208726708|gb|EDZ76309.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4206]
gi|208735762|gb|EDZ84449.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4045]
gi|208739400|gb|EDZ87082.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4042]
gi|209159557|gb|ACI36990.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC4115]
gi|209748990|gb|ACI72802.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
gi|209748992|gb|ACI72803.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
gi|209748996|gb|ACI72805.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
gi|217322440|gb|EEC30864.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. TW14588]
gi|254595766|gb|ACT75127.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. TW14359]
gi|320190514|gb|EFW65164.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. EC1212]
gi|320638709|gb|EFX08370.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O157:H7 str. G5101]
gi|326345317|gb|EGD69060.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. 1125]
gi|326346829|gb|EGD70563.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
O157:H7 str. 1044]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|325499880|gb|EGC97739.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia fergusonii
ECD227]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GIEGEVFASNV--FSEVKGRFDMIIS 267
>gi|323975871|gb|EGB70967.1| methyltransferase small domain-containing protein [Escherichia coli
TW10509]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|321442021|gb|ADW85425.1| arg methyltransferase [Podosesia syringae]
Length = 244
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N F R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDFARKIVEANRLDDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIIKGKVEEVVLPVEQVDIIIS 95
>gi|309704829|emb|CBJ04180.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
ETEC H10407]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|331666038|ref|ZP_08366932.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli TA143]
gi|331057089|gb|EGI29083.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli TA143]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|331650856|ref|ZP_08351884.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli M718]
gi|331051310|gb|EGI23359.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli M718]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|229178576|ref|ZP_04305940.1| Methyltransferase type 12 [Bacillus cereus 172560W]
gi|228604734|gb|EEK62191.1| Methyltransferase type 12 [Bacillus cereus 172560W]
Length = 293
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 17/136 (12%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 2 LETY-----DWNNK--LTYLKNTRDLYYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLG 54
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + + E ++ D+
Sbjct: 55 LVLMPLLPE--GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI 111
Query: 147 ARALADLDTLLEYSFP 162
A LL + P
Sbjct: 112 CHAF-----LLHMTTP 122
>gi|194434182|ref|ZP_03066450.1| ribosomal RNA small subunit methyltransferase C [Shigella
dysenteriae 1012]
gi|194417619|gb|EDX33720.1| ribosomal RNA small subunit methyltransferase C [Shigella
dysenteriae 1012]
gi|320179333|gb|EFW54291.1| Ribosomal RNA small subunit methyltransferase C [Shigella boydii
ATCC 9905]
gi|332083687|gb|EGI88905.1| ribosomal RNA small subunit methyltransferase C [Shigella
dysenteriae 155-74]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDIGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|169633888|ref|YP_001707624.1| putative methyltransferase [Acinetobacter baumannii SDF]
gi|169152680|emb|CAP01681.1| putative methyltransferase [Acinetobacter baumannii]
Length = 183
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ +Q A +
Sbjct: 45 QNAHVLDICTGSGALGFEAL----SRGAASVYMIEPDKTQARFLKDNIQLLKAHNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|218698207|ref|YP_002405874.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
55989]
gi|237704107|ref|ZP_04534588.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
3_2_53FAA]
gi|260847187|ref|YP_003224965.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O103:H2 str.
12009]
gi|300905357|ref|ZP_07123127.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
gi|301303471|ref|ZP_07209594.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
gi|226712939|sp|B7LEL6|RSMC_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|218354939|emb|CAV02161.1| 16S RNA m2G1207 methylase [Escherichia coli 55989]
gi|226902019|gb|EEH88278.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
3_2_53FAA]
gi|257762334|dbj|BAI33831.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O103:H2 str.
12009]
gi|281181513|dbj|BAI57843.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
SE15]
gi|300402766|gb|EFJ86304.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
gi|300841198|gb|EFK68958.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
gi|315255771|gb|EFU35739.1| methyltransferase small domain protein [Escherichia coli MS 85-1]
gi|315284963|gb|EFU44408.1| methyltransferase small domain protein [Escherichia coli MS 110-3]
gi|323163257|gb|EFZ49088.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
E128010]
gi|323955326|gb|EGB51098.1| methyltransferase small domain-containing protein [Escherichia coli
H263]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|16132189|ref|NP_418788.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli str. K-12
substr. MG1655]
gi|82779621|ref|YP_405970.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella dysenteriae
Sd197]
gi|89111078|ref|AP_004858.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
W3110]
gi|170083756|ref|YP_001733076.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
DH10B]
gi|218561546|ref|YP_002394459.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli S88]
gi|238903457|ref|YP_002929253.1| 16S rRNA m2G1207 methylase [Escherichia coli BW2952]
gi|253775000|ref|YP_003037831.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254164296|ref|YP_003047406.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli B
str. REL606]
gi|293417843|ref|ZP_06660465.1| rsmC [Escherichia coli B185]
gi|309787410|ref|ZP_07682022.1| ribosomal RNA small subunit methyltransferase C [Shigella
dysenteriae 1617]
gi|312970060|ref|ZP_07784242.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
1827-70]
gi|732118|sp|P39406|RSMC_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|123560843|sp|Q327M6|RSMC_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712938|sp|B7MNC1|RSMC_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712944|sp|B1XFI0|RSMC_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|537211|gb|AAA97267.1| ORF_f343b [Escherichia coli str. K-12 substr. MG1655]
gi|1790830|gb|AAC77324.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli str. K-12
substr. MG1655]
gi|81243769|gb|ABB64479.1| putative enzyme [Shigella dysenteriae Sd197]
gi|85677109|dbj|BAE78359.1| 16S RNA m2G1207 methylase [Escherichia coli str. K12 substr. W3110]
gi|169891591|gb|ACB05298.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
DH10B]
gi|218368315|emb|CAR06134.1| 16S RNA m2G1207 methylase [Escherichia coli S88]
gi|238859733|gb|ACR61731.1| 16S rRNA m2G1207 methylase [Escherichia coli BW2952]
gi|242379893|emb|CAQ34729.1| 16S rRNA m[2]G1207 methyltransferase [Escherichia coli BL21(DE3)]
gi|253326044|gb|ACT30646.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253976199|gb|ACT41870.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli B
str. REL606]
gi|253980356|gb|ACT46026.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
BL21(DE3)]
gi|260450819|gb|ACX41241.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli DH1]
gi|291430561|gb|EFF03559.1| rsmC [Escherichia coli B185]
gi|308924988|gb|EFP70483.1| ribosomal RNA small subunit methyltransferase C [Shigella
dysenteriae 1617]
gi|310337558|gb|EFQ02669.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
1827-70]
gi|315138923|dbj|BAJ46082.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli DH1]
gi|323171382|gb|EFZ57029.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
LT-68]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|170021670|ref|YP_001726624.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli ATCC
8739]
gi|188494749|ref|ZP_03002019.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
53638]
gi|291285749|ref|YP_003502567.1| 16S RNA G1207 methylase RsmC [Escherichia coli O55:H7 str. CB9615]
gi|300918454|ref|ZP_07135051.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
gi|300932046|ref|ZP_07147341.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
gi|300946754|ref|ZP_07161002.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
gi|300959114|ref|ZP_07171200.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
gi|301646887|ref|ZP_07246733.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
gi|307136569|ref|ZP_07495925.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli H736]
gi|312966083|ref|ZP_07780309.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
2362-75]
gi|331640412|ref|ZP_08341560.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli H736]
gi|226712947|sp|B1IS49|RSMC_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|169756598|gb|ACA79297.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739]
gi|188489948|gb|EDU65051.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
53638]
gi|209748988|gb|ACI72801.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
gi|209748994|gb|ACI72804.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
gi|284924549|emb|CBG37688.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
042]
gi|290765622|gb|ADD59583.1| 16S RNA G1207 methylase RsmC [Escherichia coli O55:H7 str. CB9615]
gi|300314262|gb|EFJ64046.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
gi|300414377|gb|EFJ97687.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
gi|300453578|gb|EFK17198.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
gi|300460191|gb|EFK23684.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
gi|301074940|gb|EFK89746.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
gi|312289326|gb|EFR17220.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
2362-75]
gi|320644112|gb|EFX13187.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O157:H- str. 493-89]
gi|320649429|gb|EFX17965.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O157:H- str. H 2687]
gi|320654830|gb|EFX22799.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320660682|gb|EFX28143.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665519|gb|EFX32569.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O157:H7 str. LSU-61]
gi|323960144|gb|EGB55788.1| methyltransferase small domain-containing protein [Escherichia coli
H489]
gi|323965372|gb|EGB60828.1| methyltransferase small domain-containing protein [Escherichia coli
M863]
gi|327250301|gb|EGE62020.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
STEC_7v]
gi|331040158|gb|EGI12365.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli H736]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|22126245|ref|NP_669668.1| tellurite resistance protein TehB [Yersinia pestis KIM 10]
gi|45441507|ref|NP_993046.1| tellurite resistance protein TehB [Yersinia pestis biovar Microtus
str. 91001]
gi|51596273|ref|YP_070464.1| tellurite resistance protein TehB [Yersinia pseudotuberculosis IP
32953]
gi|108807328|ref|YP_651244.1| tellurite resistance protein TehB [Yersinia pestis Antiqua]
gi|145598468|ref|YP_001162544.1| tellurite resistance protein TehB [Yersinia pestis Pestoides F]
gi|149366114|ref|ZP_01888149.1| putative tellurite resistance protein [Yersinia pestis CA88-4125]
gi|153947991|ref|YP_001401106.1| tellurite resistance protein TehB [Yersinia pseudotuberculosis IP
31758]
gi|162418716|ref|YP_001606592.1| tellurite resistance protein TehB [Yersinia pestis Angola]
gi|165927162|ref|ZP_02222994.1| tellurite resistance protein TehB [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165939763|ref|ZP_02228305.1| tellurite resistance protein TehB [Yersinia pestis biovar
Orientalis str. IP275]
gi|166009429|ref|ZP_02230327.1| tellurite resistance protein TehB [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166210726|ref|ZP_02236761.1| tellurite resistance protein TehB [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401023|ref|ZP_02306526.1| tellurite resistance protein TehB [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420323|ref|ZP_02312076.1| tellurite resistance protein TehB [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167466541|ref|ZP_02331245.1| tellurite resistance protein TehB [Yersinia pestis FV-1]
gi|170024472|ref|YP_001720977.1| tellurite resistance protein TehB [Yersinia pseudotuberculosis
YPIII]
gi|186895308|ref|YP_001872420.1| tellurite resistance protein TehB [Yersinia pseudotuberculosis
PB1/+]
gi|218929063|ref|YP_002346938.1| tellurite resistance protein TehB [Yersinia pestis CO92]
gi|229894625|ref|ZP_04509806.1| putative tellurite resistance protein [Yersinia pestis Pestoides A]
gi|229897354|ref|ZP_04512510.1| putative tellurite resistance protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|21959217|gb|AAM85919.1|AE013839_2 tellurite resistance [Yersinia pestis KIM 10]
gi|4106597|emb|CAA21352.1| tehB [Yersinia pestis]
gi|45436368|gb|AAS61923.1| putative tellurite resistance protein [Yersinia pestis biovar
Microtus str. 91001]
gi|51589555|emb|CAH21185.1| putative tellurite resistance protein [Yersinia pseudotuberculosis
IP 32953]
gi|108779241|gb|ABG13299.1| putative tellurite resistance protein [Yersinia pestis Antiqua]
gi|115347674|emb|CAL20587.1| putative tellurite resistance protein [Yersinia pestis CO92]
gi|145210164|gb|ABP39571.1| tellurite resistance protein [Yersinia pestis Pestoides F]
gi|149292527|gb|EDM42601.1| putative tellurite resistance protein [Yersinia pestis CA88-4125]
gi|152959486|gb|ABS46947.1| tellurite resistance protein TehB [Yersinia pseudotuberculosis IP
31758]
gi|162351531|gb|ABX85479.1| tellurite resistance protein TehB [Yersinia pestis Angola]
gi|165912351|gb|EDR30986.1| tellurite resistance protein TehB [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920830|gb|EDR38078.1| tellurite resistance protein TehB [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165991984|gb|EDR44285.1| tellurite resistance protein TehB [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207906|gb|EDR52386.1| tellurite resistance protein TehB [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962018|gb|EDR58039.1| tellurite resistance protein TehB [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049412|gb|EDR60820.1| tellurite resistance protein TehB [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|169751006|gb|ACA68524.1| tellurite resistance protein TehB [Yersinia pseudotuberculosis
YPIII]
gi|186698334|gb|ACC88963.1| tellurite resistance protein TehB [Yersinia pseudotuberculosis
PB1/+]
gi|229693691|gb|EEO83740.1| putative tellurite resistance protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229702380|gb|EEO90398.1| putative tellurite resistance protein [Yersinia pestis Pestoides A]
gi|262361903|gb|ACY58624.1| putative tellurite resistance protein [Yersinia pestis D106004]
gi|262365958|gb|ACY62515.1| putative tellurite resistance protein [Yersinia pestis D182038]
Length = 295
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK NL T + V + P +DLG G G + ++ G
Sbjct: 108 KKYNLT--PTHSEVIE-------AVKTVKP--GKALDLGCGSGRNSLYLNLL-----GFD 151
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++ N L+ ++ K A +G + + D I +
Sbjct: 152 VTAVDKNNDSIGNLQQIIDKEALKGITASSYNINEASLDERYDFILS 198
>gi|333026891|ref|ZP_08454955.1| putative methyltransferase [Streptomyces sp. Tu6071]
gi|332746743|gb|EGJ77184.1| putative methyltransferase [Streptomyces sp. Tu6071]
Length = 221
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFP---GIITS---IQLSSIEGGLVNLIESKNKKASFLRYV 117
+ + P + +D+GSG G P G++ + + + G+V L + A FLR
Sbjct: 43 WLAKELPAGARVLDVGSGTGLPTAKGLVEAGFDVTGVDLSPGMVELATTHVPGARFLR-- 100
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ A E P+ + D I+
Sbjct: 101 --------RDLASLRAEGPEGLGRFDGITC 122
>gi|315613342|ref|ZP_07888251.1| methyltransferase domain protein [Streptococcus sanguinis ATCC
49296]
gi|315314577|gb|EFU62620.1| methyltransferase domain protein [Streptococcus sanguinis ATCC
49296]
Length = 196
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ R ++ +F
Sbjct: 55 VNKGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINNRALDLARQNAERNKIEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 111 QSNI--YEQVEGKFDHVISNPPIRA 133
>gi|296155970|ref|ZP_06838809.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia sp. Ch1-1]
gi|295893476|gb|EFG73255.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia sp. Ch1-1]
Length = 438
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE ++ F+ +
Sbjct: 239 ITLARLAPAPGELLWDVGAGSGSIGIEWMRAHPTCRAIA---IEGHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R A Q + D +
Sbjct: 296 GVPGLQLVAGRAPAALQGLPVPDAV 320
>gi|291166399|gb|EFE28445.1| 50S ribosomal protein L11 methyltransferase [Filifactor alocis ATCC
35896]
Length = 313
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + Y +D+G G G I SI + +V I+ + ++
Sbjct: 169 IEKNIKYQDNLLDIGCGSG----ILSIVAKKLGANIVEAIDLDPVAVKVAKENIEYNHLT 224
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
G++ + I D++ A
Sbjct: 225 GQIVVKEGNLLDESIGLYDIVVA 247
>gi|281210326|gb|EFA84493.1| Sterol 24-C-methyltransferase [Polysphondylium pallidum PN500]
Length = 462
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 10/94 (10%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
V DS R+ + S +D+G G G P + + G + + K+
Sbjct: 226 LEHEVADSARITK----DSFVLDVGCGVGGPTLEIA----KYTGCRIRGLNINKKQVGIA 277
Query: 115 RYVVQKTAARGKV--FACRIQEAPQMITTCDVIS 146
+K + + P T DV++
Sbjct: 278 TERAKKLGLSERAGFDHGDAMKMPYADNTFDVVT 311
>gi|260429256|ref|ZP_05783233.1| 3-demethylubiquinone-9 3-O-methyltransferase [Citreicella sp. SE45]
gi|260419879|gb|EEX13132.1| 3-demethylubiquinone-9 3-O-methyltransferase [Citreicella sp. SE45]
Length = 248
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + V +++ + + +++ +
Sbjct: 60 EGLRIVDIGCGGGLLCEPMARLGAE-----VVGVDAAERNIPVAQLHAEQSGLKIDYRHT 114
Query: 131 RIQEAPQMITTCDVI 145
+ + DV+
Sbjct: 115 TAEALAEAGELFDVV 129
>gi|255263500|ref|ZP_05342842.1| 3-demethylubiquinone-9 3-O-methyltransferase [Thalassiobium sp.
R2A62]
gi|255105835|gb|EET48509.1| 3-demethylubiquinone-9 3-O-methyltransferase [Thalassiobium sp.
R2A62]
Length = 251
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 14/105 (13%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+ F +D+G GGG + + I G ++ + R +
Sbjct: 56 LDTAAPF----AGLRILDIGCGGGLLCEPMARLGAEIVGA-----DAAERNIPVARVHAE 106
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
++ + + DV+ +++ + + P L
Sbjct: 107 QSGLDIDYRHTTAEAMAEAGEQFDVVL-----NMEVVEHVADPLL 146
>gi|218529949|ref|YP_002420765.1| methyltransferase type 11 [Methylobacterium chloromethanicum CM4]
gi|218522252|gb|ACK82837.1| Methyltransferase type 11 [Methylobacterium chloromethanicum CM4]
Length = 269
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 8/96 (8%)
Query: 55 WIRHVEDSL--RVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
R + DS+ V +L P P +DL +G G+ + + G V +
Sbjct: 26 ISRGIADSIEHCVLRLDPKPGERVLDLATGTGWTSRVVA-----RRGAQVTGADISADLL 80
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
SF + + P D I +
Sbjct: 81 SFAAEQARAEGLDIDYQLGDAERLPFADGAFDAIIS 116
>gi|94985722|ref|YP_605086.1| rRNA (guanine-N(2)-)-methyltransferase [Deinococcus geothermalis
DSM 11300]
gi|94556003|gb|ABF45917.1| 16S rRNA m(2)G 1207 methyltransferase [Deinococcus geothermalis DSM
11300]
Length = 407
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
++L + +L +DLG G G G ++ G V L++ + + +
Sbjct: 256 LEALDLTELDLTGKRVLDLGCGTGLMG-----AWAARRGAQVTLVDGDLQSVRSAQATLA 310
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
G VF + +A T DVI
Sbjct: 311 ANGLSGDVFLSDV-DAALGERTFDVI 335
>gi|307296819|ref|ZP_07576637.1| methyltransferase small [Sphingobium chlorophenolicum L-1]
gi|306877732|gb|EFN08958.1| methyltransferase small [Sphingobium chlorophenolicum L-1]
Length = 325
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 23/85 (27%), Gaps = 6/85 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P S DLG+G G + + + + + F R
Sbjct: 140 LSLNPVSP-GSRIADLGTGAGVGAVTLARLRPDAR---ILMTDVNPAALRFARINAGLAG 195
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ D+I A
Sbjct: 196 IEARQALGD--RLDPREGRFDLIVA 218
>gi|262172301|ref|ZP_06039979.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus MB-451]
gi|261893377|gb|EEY39363.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus MB-451]
Length = 340
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 9/105 (8%)
Query: 45 LVSSSTVEDFWIRHVED--SLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
L ++ + D S + P ID+G G G G + + +IE +
Sbjct: 172 LT-IRSLPGVFSHGEFDLGSRLLLDTLPTLSGKVIDIGCGAGVLGCVMAKLNPNIE---L 227
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ + + + RG V+ + D +
Sbjct: 228 EMTDISALAIRSSQETLLANQLRGTVYPSDM--FSDTKHKYDYVV 270
>gi|73668015|ref|YP_304030.1| hypothetical protein Mbar_A0468 [Methanosarcina barkeri str.
Fusaro]
gi|72395177|gb|AAZ69450.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 249
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V + P +D+G+G GF I+ S G V I+ F R + +
Sbjct: 38 VLEYAPSKDRLDILDIGTGPGFFPIVLS-----QGGHNVTGIDLTENMIEFARLNLAREG 92
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR 148
A K+ Q D++ R
Sbjct: 93 ASAKLVTMDCQNLKFPDNCFDLLVCR 118
>gi|304439745|ref|ZP_07399643.1| possible SAM-dependent methyltransferase [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371732|gb|EFM25340.1| possible SAM-dependent methyltransferase [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 229
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 6/87 (6%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DSL + +D G G G + + + E V++ E L ++
Sbjct: 26 DSLILSSFANVKGKVLDAGCGNGI--LSLRVLNRAREVVSVDMEEIY---TDNLNRTIEL 80
Query: 121 TAARG-KVFACRIQEAPQMITTCDVIS 146
+ KV +I+ D I
Sbjct: 81 NNLKNIKVVNSKIENLKGYSGYFDTII 107
>gi|300313562|ref|YP_003777654.1| polypeptide chain release factors methylase [Herbaspirillum
seropedicae SmR1]
gi|300076347|gb|ADJ65746.1| polypeptide chain release factors methylase protein [Herbaspirillum
seropedicae SmR1]
Length = 277
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P +D+G+G G + + + V +++ + R R
Sbjct: 104 ALERLPQGGSALDMGTGSGAIAVAIAHTRPDAQ---VTALDASPAALAIARENASTHQVR 160
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
++ A D+I +
Sbjct: 161 VRLLESDWYGALDADQAFDLIVS 183
>gi|268326446|emb|CBH40034.1| conserved hypothetical protein, SAM-dependent methyltransferase
type 11 family [uncultured archaeon]
Length = 276
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 42/131 (32%), Gaps = 26/131 (19%)
Query: 38 KWSKKINLVSSSTVEDFWIR------------HVEDSLRVFQLHPYPSIW------IDLG 79
+W++K+ S + D+W + E ++ ++ I +D+
Sbjct: 11 EWAEKMGQTSRISGSDYWNKRAEDYADYIRTSDFEHGRKIKEIFETEGILKEDFEVLDIA 70
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQEA--P 136
+G G + + V +E + L +K ++ + +E
Sbjct: 71 AGPGSVTVPFA-----ESVKKVTAVEPAEEMCKRLIENAKKKGLENIEIINKKWEEVSDA 125
Query: 137 QMITTCDVISA 147
+ D++
Sbjct: 126 EFENEFDLVVC 136
>gi|260858545|ref|YP_003232436.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O26:H11 str.
11368]
gi|257757194|dbj|BAI28696.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O26:H11 str.
11368]
gi|323157742|gb|EFZ43847.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
EPECa14]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|240136912|ref|YP_002961379.1| hypothetical protein MexAM1_META1p0138 [Methylobacterium extorquens
AM1]
gi|240006876|gb|ACS38102.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 262
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+D+G GGF SI++ V ++S + + R+
Sbjct: 53 ASALSADLTGKSVLDIGCNGGF----YSIEMKRRGASRVLGLDSDERYLAQARFAASHLG 108
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + + DV+ + L P L
Sbjct: 109 HDIEFRKLSVYDVGALAERFDVVLF-----MGVLYHLRHPMLA 146
>gi|126340076|ref|XP_001366105.1| PREDICTED: similar to HMT1 hnRNP methyltransferase-like 4
[Monodelphis domestica]
Length = 393
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVYGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|160900149|ref|YP_001565731.1| 3-demethylubiquinone-9 3-methyltransferase [Delftia acidovorans
SPH-1]
gi|151500322|gb|ABS12101.1| ubiquinone biosynthesis O-methyl-transferase [Delftia acidovorans]
gi|160365733|gb|ABX37346.1| ubiquinone biosynthesis O-methyltransferase [Delftia acidovorans
SPH-1]
Length = 240
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 6/84 (7%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Q +D+G GGG I + ++ V I+ K + +T
Sbjct: 47 AQAPLKGRRVLDVGCGGG----ILADSMARKGAREVVGIDLATKALRVAQLHALETGTPN 102
Query: 126 KVFAC-RIQE-APQMITTCDVISA 147
+ ++ A + + DV++
Sbjct: 103 IHYHEVSVERLAEEQPGSFDVVTC 126
>gi|116074162|ref|ZP_01471424.1| hypothetical protein RS9916_36967 [Synechococcus sp. RS9916]
gi|116069467|gb|EAU75219.1| hypothetical protein RS9916_36967 [Synechococcus sp. RS9916]
Length = 270
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 72 PSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
+D+G G GF + + + S G V +E + ++ ++
Sbjct: 41 GESVLDVGCGPGFAAMDLARVVGPS---GRVVGLERSPTYVNAGNAFARQAGIDQLELRQ 97
Query: 130 CRIQEAPQMITTCDVISARALAD-LDTLLEYSFPWLY 165
+ + P D+I +R +A L L P L+
Sbjct: 98 QDVLQDPWPQERFDLIWSRWVAMFLPQL----EPLLH 130
>gi|325095089|gb|EGC48399.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 401
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 36/108 (33%), Gaps = 12/108 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G S + V+L S +R T
Sbjct: 90 LHLAPIGSSPQNILDIGAGTGIWCCQMGDDYPSAQILGVDL--------SAIRNTKHVTP 141
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR----ALADLDTLLEYSFPWLYQ 166
K I+ I + D I R A+ D L+E F L
Sbjct: 142 ENVKFEIDDIESDWTFIDSFDYIHCRYMYAAIRDWPKLVERCFNHLTP 189
>gi|311104907|ref|YP_003977760.1| methyltransferase [Achromobacter xylosoxidans A8]
gi|310759596|gb|ADP15045.1| 3-demethylubiquinone-9 3-O-methyltransferase [Achromobacter
xylosoxidans A8]
Length = 242
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 22/134 (16%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----YPSI 74
++ + E L+ F L +W E +F H + LR+ +
Sbjct: 13 INADQAE-LDKFGALASRW---------WDPESEFKPLHAINPLRLEWIQECAGSLAGKK 62
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + ++ S E ++L + K A ++ + + ++E
Sbjct: 63 VLDVGCGGGI--LSEAMAHSGAEVTGIDLADKSLKVARLHGL---ESGVKVEYRKVPVEE 117
Query: 135 -APQMITTCDVISA 147
A + DV++
Sbjct: 118 LAAEQPGQYDVVTC 131
>gi|227823192|ref|YP_002827164.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium fredii
NGR234]
gi|254789994|sp|C3MHQ9|UBIG_RHISN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|227342193|gb|ACP26411.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium fredii
NGR234]
Length = 248
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V ++ K R + A +
Sbjct: 67 RLLDIGCGGGLLSEPMARMGAD-----VLGADASEKNIGIARTHAAGSGVNVDYRAVTAE 121
Query: 134 EAPQMITTCDVI 145
+ + D++
Sbjct: 122 ALAEAGESFDIV 133
>gi|118475227|ref|YP_891483.1| hypothetical protein CFF8240_0281 [Campylobacter fetus subsp. fetus
82-40]
gi|118414453|gb|ABK82873.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
82-40]
Length = 263
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 27/80 (33%), Gaps = 6/80 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-V 127
+ +D+G G G G+ + + V + ++ ++ V
Sbjct: 59 FDKSTTVLDMGCGPGTIGLKLA-----KDVKNVLCCDYSDEMLKCVKSNAANLGLDNVKV 113
Query: 128 FACRIQEAPQMITTCDVISA 147
+++ + + D+I A
Sbjct: 114 KKLSFEDSWEELPKYDIIIA 133
>gi|87307355|ref|ZP_01089500.1| hypothetical protein DSM3645_17570 [Blastopirellula marina DSM
3645]
gi|87290095|gb|EAQ81984.1| hypothetical protein DSM3645_17570 [Blastopirellula marina DSM
3645]
Length = 540
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+++G GG I + L + I+ ++ V+K ++ +
Sbjct: 58 RVLEIGCAGGGNIIPMAETLPESQ---FVGIDLSQRQIESALSSVEKLGLTNIELKHLDV 114
Query: 133 QEAPQMITTCDVISA 147
+ Q + D I
Sbjct: 115 MDVDQSLGKFDYIIC 129
>gi|326422419|gb|EGD71820.1| Methyltransferase type 11 [Candidatus Parvarchaeum acidiphilum
ARMAN-4_'5-way FS']
Length = 121
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES--KNKKASFLRYVVQKTAARGKV 127
P +D+G+G G +I+LS I+ V I+ KK + ++ +K +
Sbjct: 41 EKPKSILDIGAGPG----DLAIKLSEIKNTKVFCIDPSVSMKKIAENKFAKRK--IKNIE 94
Query: 128 FACRIQEAPQMITTCDVIS 146
+ + DVI
Sbjct: 95 YKLGSSRYIPIKEKFDVIV 113
>gi|323187442|gb|EFZ72751.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli RN587/1]
Length = 277
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVAL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|320161487|ref|YP_004174711.1| hypothetical protein ANT_20850 [Anaerolinea thermophila UNI-1]
gi|319995340|dbj|BAJ64111.1| hypothetical protein ANT_20850 [Anaerolinea thermophila UNI-1]
Length = 470
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 12/103 (11%)
Query: 51 VEDFWIRHVEDSL-----RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
ED W +SL F +D+GSG G + + G + I+
Sbjct: 274 PEDLWQ----NSLGCGNPTAFARLQPGMTVLDIGSGRGLD--VFLAAQKVGKEGRIIGID 327
Query: 106 SKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISA 147
+ + + +K F +E P T DVI +
Sbjct: 328 PSPEMLKKAQQIAEKYQLANVEFRQGEAEEIPLPDETVDVILS 370
>gi|229150432|ref|ZP_04278648.1| Methyltransferase type 12 [Bacillus cereus m1550]
gi|228632925|gb|EEK89538.1| Methyltransferase type 12 [Bacillus cereus m1550]
Length = 293
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 17/136 (12%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 2 LETY-----DWNNK--LTYLKNTRDLYYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLG 54
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + + E ++ D+
Sbjct: 55 LVLMPLLPE--GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI 111
Query: 147 ARALADLDTLLEYSFP 162
A LL + P
Sbjct: 112 CHAF-----LLHMTTP 122
>gi|268590455|ref|ZP_06124676.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Providencia rettgeri DSM 1131]
gi|291314135|gb|EFE54588.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Providencia rettgeri DSM 1131]
Length = 310
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ S + + H V + P +DL +G G I + + E V+ +
Sbjct: 111 LIPRSPIGELINNHF-----VGLVADEPQTILDLCTGSGCIAIACAYEFPDAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + + +V R M D+I
Sbjct: 163 DISSDVLAVAEQNIANHGLEHRVIPIRSDLFRDMPEVKYDLIV 205
>gi|195394326|ref|XP_002055796.1| GJ10573 [Drosophila virilis]
gi|194142505|gb|EDW58908.1| GJ10573 [Drosophila virilis]
Length = 381
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G G G I S+ + V ++ N F R V+ +
Sbjct: 92 KHLFHGKTVLDVGCGTG----ILSMFAAKAGAAKVIAVDCSN-IIEFARQVIIDNNLQDV 146
Query: 126 -KVFACRIQ--EAPQMITTCDVISA 147
V +I+ E P + D+I +
Sbjct: 147 ITVVKGKIEEIELPNGVEKVDIIIS 171
>gi|149924336|ref|ZP_01912705.1| hypothetical protein PPSIR1_29770 [Plesiocystis pacifica SIR-1]
gi|149814819|gb|EDM74388.1| hypothetical protein PPSIR1_29770 [Plesiocystis pacifica SIR-1]
Length = 215
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVF 128
+D+G+G G + + G V I+ K F R ++ R K
Sbjct: 55 EGKKVLDIGTGTGRFAVECA-----KRGADVIGIDFAPKMIEFSRQAARRFGVEERCKFV 109
Query: 129 ACRIQEAPQMITTCDVISA 147
+ E DV+ A
Sbjct: 110 VGDVLE-HDFDEQFDVVLA 127
>gi|118467962|ref|YP_888613.1| transcriptional regulatory protein [Mycobacterium smegmatis str.
MC2 155]
gi|118169249|gb|ABK70145.1| possible transcriptional regulatory protein [Mycobacterium
smegmatis str. MC2 155]
Length = 365
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + D+G G G + + + ++ E + R Q+
Sbjct: 176 LVDRLQAGADLADIGCGSGHAVNVIAQAFPASRCTGIDFSEEG---LATGRDEAQRLGLD 232
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
F R DVI+A
Sbjct: 233 NATFIARDVAELDETEAYDVITA 255
>gi|306829680|ref|ZP_07462870.1| methyltransferase domain protein [Streptococcus mitis ATCC 6249]
gi|304428766|gb|EFM31856.1| methyltransferase domain protein [Streptococcus mitis ATCC 6249]
Length = 196
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ + ++ +F
Sbjct: 55 VNKGETVLDVGCGYG----PLGLSLAKAYGAQATMVDINNRALDLAQQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 111 QSNI--YEQVEGKFDHVISNPPIRA 133
>gi|262301045|gb|ACY43115.1| arg methyltransferase [Eumesocampa frigilis]
Length = 242
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + + +D+G G G I S+ + V ++ N VV+
Sbjct: 7 NSMYLNKHLFRGKVVMDVGCGTG----ILSMFAAKAGAAKVFAVDCSN-IVDHAXEVVKA 61
Query: 121 TAARGKV--FACRIQ--EAPQMITTCDVISA 147
V +++ E P D+I +
Sbjct: 62 NGLDNIVTIIKGKVEEIELPAPYEKVDIIIS 92
>gi|228922867|ref|ZP_04086165.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228836922|gb|EEM82265.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 242
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P ++LG G G+ S V+ ES + + + F C
Sbjct: 18 PIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCE 71
Query: 132 IQEAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 72 DIERLRLEESYDVIISNA 89
>gi|145548696|ref|XP_001460028.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427856|emb|CAK92631.1| unnamed protein product [Paramecium tetraurelia]
Length = 359
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 13/82 (15%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN-----KKASFLRYVVQKTAARG 125
I +D+G+G G I SI + V +E+ N KK + ++
Sbjct: 76 QNKIVLDVGAGTG----ILSIFAAQAGAKHVYAVENANIAIHAKKIISDNGLSEQI---- 127
Query: 126 KVFACRIQEAPQMITTCDVISA 147
V +I+E + D+I +
Sbjct: 128 TVVKGKIEEIELPVEKVDIIIS 149
>gi|329735678|gb|EGG71961.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus epidermidis VCU028]
Length = 277
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 8/77 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ FY K ++ L+ E+ + H +L D+G+G G I
Sbjct: 74 FQSFYGYQYKVNQHC-LIPRPETEEVML-HFL------ELCKKTDTIADIGTGSGAIAIT 125
Query: 89 TSIQLSSIEGGLVNLIE 105
+ + +L E
Sbjct: 126 LKLLQPELNVIATDLYE 142
>gi|315616262|gb|EFU96881.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
3431]
Length = 343
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|161504897|ref|YP_001572009.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|226712971|sp|A9MRB9|RSMC_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|160866244|gb|ABX22867.1| hypothetical protein SARI_03023 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 342
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R D S L + L P+ +D+G G G + + + L
Sbjct: 169 IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVR---LTL 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + G VFA + ++ D+I +
Sbjct: 226 CDVSAPAVEASRATLAVNGLDGDVFASNV--FSEVKGRFDMIIS 267
>gi|54294828|ref|YP_127243.1| hypothetical protein lpl1906 [Legionella pneumophila str. Lens]
gi|53754660|emb|CAH16145.1| hypothetical protein lpl1906 [Legionella pneumophila str. Lens]
Length = 630
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L+ Y +D+G G G + ++ + NL ES K +
Sbjct: 450 LACLDLNQY-RSVLDVGGGDGTIACALAQAYPHLKITVYNLPESA--KIAQKNIDAMGLQ 506
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
R VFA + D+I
Sbjct: 507 KRISVFAGDFINDERFPAGFDLI 529
>gi|257465571|ref|ZP_05629942.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
202]
gi|257451231|gb|EEV25274.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
202]
Length = 328
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G I+ + + + + + + GKV A
Sbjct: 189 KGNVLDLGCGAGVIGASLKKMFPKIK---LTMSDIHAMALASSERTLAENQLEGKVVASD 245
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ L
Sbjct: 246 V--FSHIDGRFDLIISNPPFHDGIDTAYRAVESL 277
>gi|146284175|ref|YP_001174328.1| biotin synthesis protein BioC [Pseudomonas stutzeri A1501]
gi|145572380|gb|ABP81486.1| biotin synthesis protein BioC [Pseudomonas stutzeri A1501]
Length = 265
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + W+DLGSG G+ + +G +++ E LR+ +
Sbjct: 40 LARLPADLQVASWLDLGSGTGYFSRALAAAFPQGDGIALDIAEGM------LRHARPQGG 93
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
AR A + P D+I + L L++ +
Sbjct: 94 AR-HFVAGDAERLPLRDAGLDLI----FSSLA--LQWCEDF 127
>gi|51473957|ref|YP_067714.1| hypothetical protein RT0776 [Rickettsia typhi str. Wilmington]
gi|51460269|gb|AAU04232.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 551
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
S ++LG G I ++ V+L SK + V+ + +
Sbjct: 69 ENSKILELGCAAGGNLIPHAVLYPKAHFVGVDL--SKVQ-IDEANKNVRALGLKNIEFHH 125
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 126 CSITDINDSFGKFDYIIC 143
>gi|21220648|ref|NP_626427.1| transferase [Streptomyces coelicolor A3(2)]
gi|5578856|emb|CAB51258.1| putative transferase [Streptomyces coelicolor A3(2)]
Length = 256
Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSG-GGFPGIITSIQLSSIEGGLVNLIESKNK--KASF 113
RH + +++ P P W+D+G+G FP + + +++ ++ +A
Sbjct: 97 RHRLAARALYRHCPEPESWLDVGTGDAEFP----RTARTHFPYTAFDGLDATHRVLRARA 152
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ V + R A ++ DV+S
Sbjct: 153 VERVEEAFVGRLTDPHI----AARLRERYDVVS 181
>gi|328884122|emb|CCA57361.1| hypothetical protein SVEN_4075 [Streptomyces venezuelae ATCC 10712]
Length = 347
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+V D+G G G ++ + + V+ + + S R + ++
Sbjct: 160 QVTDKLAAGGTVADVGCGVGHTTLLIAKAFPN---ATVHGFDYSEEAISIARELAEEAGL 216
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
G+V + D++
Sbjct: 217 SGRVVFEVASADDYPGSGYDLV 238
>gi|227824691|ref|ZP_03989523.1| 50S ribosomal protein L11 methyltransferase [Acidaminococcus sp.
D21]
gi|226905190|gb|EEH91108.1| 50S ribosomal protein L11 methyltransferase [Acidaminococcus sp.
D21]
Length = 313
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +L D+G+G G I ++ + + ++ I+ K + + K
Sbjct: 169 LEELVTPNIDVYDVGTGSG----ILAMTAALMGARSIHAIDIDGKAVEVAKENIAKNHLS 224
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
++ + D+I A
Sbjct: 225 NRITVKKGNLLDDADEKADLIVA 247
>gi|222529538|ref|YP_002573420.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
bescii DSM 6725]
gi|254782825|sp|B9MJY9|PRMA_ANATD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|222456385|gb|ACM60647.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
bescii DSM 6725]
Length = 304
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 6/90 (6%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I +I V ++ +
Sbjct: 161 AIQKYVKPGMDVLDVGTGSG----ILAIAAKKFLARRVLAVDIDEVAVKVAEENARLNGV 216
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADL 153
++ + E + DV+ A +AD+
Sbjct: 217 EIEIKKNDLVEGIE--EKFDVVVANIVADI 244
>gi|27468633|ref|NP_765270.1| protoporphyrinogen oxidase [Staphylococcus epidermidis ATCC 12228]
gi|57867592|ref|YP_189288.1| HemK family modification methylase [Staphylococcus epidermidis
RP62A]
gi|251812172|ref|ZP_04826645.1| HemK family methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876475|ref|ZP_06285341.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus epidermidis SK135]
gi|293366081|ref|ZP_06612769.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|27316180|gb|AAO05314.1|AE016749_260 protoporphyrinogen oxidase [Staphylococcus epidermidis ATCC 12228]
gi|57638250|gb|AAW55038.1| modification methylase, HemK family [Staphylococcus epidermidis
RP62A]
gi|251804269|gb|EES56926.1| HemK family methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294727|gb|EFA87255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus epidermidis SK135]
gi|291319804|gb|EFE60162.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
epidermidis M23864:W2(grey)]
Length = 278
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 8/77 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ FY K ++ L+ E+ + H +L D+G+G G I
Sbjct: 75 FQSFYGYQYKVNQHC-LIPRPETEEVML-HFL------ELCKKTDTIADIGTGSGAIAIT 126
Query: 89 TSIQLSSIEGGLVNLIE 105
+ + +L E
Sbjct: 127 LKLLQPELNVIATDLYE 143
>gi|194436964|ref|ZP_03069063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli 101-1]
gi|253773789|ref|YP_003036620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254161294|ref|YP_003044402.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli B str. REL606]
gi|297517276|ref|ZP_06935662.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli OP50]
gi|300920410|ref|ZP_07136844.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
115-1]
gi|300928242|ref|ZP_07143779.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
187-1]
gi|301648135|ref|ZP_07247888.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
146-1]
gi|307137827|ref|ZP_07497183.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli H736]
gi|331641742|ref|ZP_08342877.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli H736]
gi|194423947|gb|EDX39935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli 101-1]
gi|242376991|emb|CAQ31714.1| protein-(glutamine-N5) methyltransferase [Escherichia coli
BL21(DE3)]
gi|253324833|gb|ACT29435.1| modification methylase, HemK family [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973195|gb|ACT38866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli B str. REL606]
gi|253977409|gb|ACT43079.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli BL21(DE3)]
gi|300412543|gb|EFJ95853.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
115-1]
gi|300463711|gb|EFK27204.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
187-1]
gi|301073721|gb|EFK88527.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
146-1]
gi|309701511|emb|CBJ00818.1| protein methyltransferase hemk (protein-glutamine N
methyltransferase) [Escherichia coli ETEC H10407]
gi|315615946|gb|EFU96572.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli 3431]
gi|323937933|gb|EGB34197.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1520]
gi|323962790|gb|EGB58368.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H489]
gi|323973390|gb|EGB68577.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TA007]
gi|331038540|gb|EGI10760.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli H736]
gi|332342794|gb|AEE56128.1| protein-(glutamine-N5) methyltransferase HemK [Escherichia coli
UMNK88]
Length = 277
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 38/132 (28%), Gaps = 39/132 (29%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVAL 148
Query: 114 LRYVVQKTAARG 125
+ Q A +
Sbjct: 149 AQRNAQHLAIKN 160
>gi|144900119|emb|CAM76983.1| ubiE/COQ5 methyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 265
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+ +DLGSG GF + + Q+ G V I+ ++ + R K F
Sbjct: 82 GEVVVDLGSGAGFDCFLAAAQVGE--SGHVIGIDMTHEMLAKARDNAAKLGLTQVEFRLG 139
Query: 131 RIQEAPQMITTCDVISA 147
I+ P DV+ +
Sbjct: 140 EIEHLPIADNVADVVIS 156
>gi|157165717|ref|YP_001466729.1| methyltransferase small domain-containing protein [Campylobacter
concisus 13826]
gi|112800176|gb|EAT97520.1| methyltransferase small [Campylobacter concisus 13826]
Length = 235
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D + +D+G+G G G++ I+ +++L+E ++ +SF
Sbjct: 19 LYDFI-CASFGEISGRVLDVGAGCGILGLLLKRDFKKIDLSMLDLLELNSEISSF---NA 74
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 75 KSNCLEARAITADFANFKD-SEKFDLIIS 102
>gi|78066296|ref|YP_369065.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia sp. 383]
gi|77967041|gb|ABB08421.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia sp. 383]
Length = 417
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI S + IE+ ++ F+ +
Sbjct: 239 MTLGRLAPVPGELLWDVGAGSGSIGIEWMRAHPSCQAIA---IEAHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 296 GVPGLQLVAGRAPDALAGLAAPDAI 320
>gi|308274279|emb|CBX30878.1| hypothetical protein N47_E43900 [uncultured Desulfobacterium sp.]
Length = 210
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 14/83 (16%)
Query: 72 PSIWIDLGSGGGFPGII------TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+G GGG+ GI +I ++ ++ K+ + RG
Sbjct: 35 EGCCLDIGCGGGYLGIELARASNLAICFLDQSRDMLEIV----KR----NIADNELQGRG 86
Query: 126 KVFACRIQEAPQMITTCDVISAR 148
+ +++ P ++ ++ +R
Sbjct: 87 ETILANVEKIPLPDSSVNLAVSR 109
>gi|329734115|gb|EGG70433.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus epidermidis VCU045]
Length = 277
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 8/77 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ FY K ++ L+ E+ + H +L D+G+G G I
Sbjct: 74 FQSFYGYQYKVNQHC-LIPRPETEEVML-HFL------ELCKKTDTIADIGTGSGAIAIT 125
Query: 89 TSIQLSSIEGGLVNLIE 105
+ + +L E
Sbjct: 126 LKLLQPELNVIATDLYE 142
>gi|322375416|ref|ZP_08049929.1| methyltransferase domain protein [Streptococcus sp. C300]
gi|321279679|gb|EFX56719.1| methyltransferase domain protein [Streptococcus sp. C300]
Length = 196
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ + ++ +F
Sbjct: 55 VNKGETVLDVGCGYG----PLGLSLAKAYGAQATMVDINNRALDLAQQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 111 QSNI--YEQVEGKFDHVISNPPIRA 133
>gi|301017244|ref|ZP_07182025.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1]
gi|300400375|gb|EFJ83913.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1]
Length = 277
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVAL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQNLAIKNIHI 163
>gi|163940642|ref|YP_001645526.1| methyltransferase type 11 [Bacillus weihenstephanensis KBAB4]
gi|229012150|ref|ZP_04169329.1| Methyltransferase type 11 [Bacillus mycoides DSM 2048]
gi|229167624|ref|ZP_04295361.1| Methyltransferase type 11 [Bacillus cereus AH621]
gi|163862839|gb|ABY43898.1| Methyltransferase type 11 [Bacillus weihenstephanensis KBAB4]
gi|228615844|gb|EEK72932.1| Methyltransferase type 11 [Bacillus cereus AH621]
gi|228749238|gb|EEL99084.1| Methyltransferase type 11 [Bacillus mycoides DSM 2048]
Length = 264
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+ + +D+ +GGG + + V ++ K + ++ F A
Sbjct: 44 HNTRLLDIATGGGHVANLLAPMFKE-----VVALDLTEKMLEKAKGFIEGNGHENVSFVA 98
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D I+ R
Sbjct: 99 GHAERLPFADDSFDTITCR 117
>gi|84500732|ref|ZP_00998981.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicola batsensis
HTCC2597]
gi|84391685|gb|EAQ04017.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicola batsensis
HTCC2597]
Length = 247
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V ++ + R +++ R +
Sbjct: 65 RVLDIGCGGGLLCEPMARLGAE-----VVGADAAERNIPVARIHAEQSGLRIDYRHTTAE 119
Query: 134 EAPQMITTCDVI 145
+ DV+
Sbjct: 120 ALAEAGERFDVV 131
>gi|332360339|gb|EGJ38151.1| methyltransferase domain protein [Streptococcus sanguinis SK49]
Length = 195
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ +G +++ + + ++
Sbjct: 50 LSVLDF-EAGERVLDVGCGYG----PLGLTLAKAQGVTATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
++F + ++ D I + RA
Sbjct: 105 ISAEIFQSNV--YEKVNGIFDHIISNPPIRA 133
>gi|317014920|gb|ADU82356.1| hypothetical protein HPGAM_07915 [Helicobacter pylori Gambia94/24]
Length = 238
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 61 DSLRVF----QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DSL ++ +D+GSG G G+ + V+L+E +K +F
Sbjct: 20 DSLFLYDFSRPFIKNSGAILDIGSGCGVLGL---LCARDNPLASVHLVEKDSK-MAFCSQ 75
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ F + I D I
Sbjct: 76 KNALKFPNAQAFESDFLDFNPPIL-YDAIVC 105
>gi|317125569|ref|YP_004099681.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Intrasporangium calvum DSM 43043]
gi|315589657|gb|ADU48954.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Intrasporangium calvum DSM 43043]
Length = 291
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P +DL SG G + + + V IE ++ +
Sbjct: 114 LLGTRPSGIRLVDLCSGSGAIALAVKTERPRVH---VRAIELSGDAVAWATANRDRLGLD 170
Query: 125 GKVFACRIQE--APQMITTCDVISA 147
+ E P + D+++A
Sbjct: 171 VAILQGDATEPAIPDWSGSVDLVTA 195
>gi|261365025|ref|ZP_05977908.1| methyltransferase domain protein [Neisseria mucosa ATCC 25996]
gi|288566614|gb|EFC88174.1| methyltransferase domain protein [Neisseria mucosa ATCC 25996]
Length = 372
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D + L+P+ D+G+G G + + L+ + ++ K + +
Sbjct: 181 LDLIAQAPLNPHIQTAFDIGTGSG----VIAAILAKRGISEIIATDTNPKAITCATANLA 236
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ +V + P+ D+I
Sbjct: 237 RLGLDKQVVVQAVDLFPE--GCADLIVC 262
>gi|195110289|ref|XP_001999714.1| GI24669 [Drosophila mojavensis]
gi|193916308|gb|EDW15175.1| GI24669 [Drosophila mojavensis]
Length = 431
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G I SI S V I++ + + V + ++
Sbjct: 157 FLNGKSVLDVGCGTG----ILSIFASQAGAKNVVGIDNSEIVYTAMDIVRKNNIKNVQLI 212
Query: 129 ACRIQEAPQMITTCDVISA 147
R+++ DVI +
Sbjct: 213 KGRLEDTELPEARYDVIIS 231
>gi|167524212|ref|XP_001746442.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775204|gb|EDQ88829.1| predicted protein [Monosiga brevicollis MX1]
Length = 517
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 13/86 (15%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES-----KNKKASFLRYVVQKT 121
+ +D+G G G I S+ + V +++ + F + K
Sbjct: 225 PSIFQDKVVLDVGCGSG----ILSMFAAKAGAKHVYAVDNSSIVHDARAIVFENGLSDKI 280
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
V +++E DVI +
Sbjct: 281 ----TVLHGKVEEVALPPEGVDVIVS 302
>gi|118365066|ref|XP_001015754.1| hypothetical protein TTHERM_00079130 [Tetrahymena thermophila]
gi|89297521|gb|EAR95509.1| hypothetical protein TTHERM_00079130 [Tetrahymena thermophila
SB210]
Length = 890
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 1 MKYCDSNSILRANYLLNTYNVSRETLEK-LEYFYFL------FLKW----SKK----INL 45
++ S + L N N+S+E E+ + + L K ++K INL
Sbjct: 4 IEEIKSKMQFKLQLLNNIQNLSKEQFEQEFQEYQQLNQILEKLEKEKVQCNQKEIKEINL 63
Query: 46 VSSSTVEDFWIRHVEDSLR 64
+S + +E + DS +
Sbjct: 64 ISLTEIEKQKSDQINDSFQ 82
>gi|186685917|ref|YP_001869113.1| methyltransferase type 12 [Nostoc punctiforme PCC 73102]
gi|186468369|gb|ACC84170.1| Methyltransferase type 12 [Nostoc punctiforme PCC 73102]
Length = 273
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 7/94 (7%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V D L +DLG+G G I + V I+ + + +
Sbjct: 33 VFDKLAEIFNLNGQGRLLDLGTGPGLISIPL-----RTQFEEVVAIDPDPEMIAEAKRQA 87
Query: 119 QKTAARGKVFACR-IQEAPQMITTCDVISA-RAL 150
A + + + + ++ + RA
Sbjct: 88 AAVGANNITWLEQGAELIDSSLGKFNLTTIGRAF 121
>gi|307709017|ref|ZP_07645477.1| hypothetical protein SMSK564_0264 [Streptococcus mitis SK564]
gi|307620353|gb|EFN99469.1| hypothetical protein SMSK564_0264 [Streptococcus mitis SK564]
Length = 193
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ + ++ +F
Sbjct: 52 VNQGETVLDVGCGYG----PLGLSLAKAFGVQATMVDINNRALDLAQQNAERNKVEATIF 107
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 108 QSNI--YEQVEGKFDHVISNPPIRA 130
>gi|295699577|ref|YP_003607470.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia sp. CCGE1002]
gi|295438790|gb|ADG17959.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia sp. CCGE1002]
Length = 459
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE+ + + F+
Sbjct: 291 ITLARLAPAPGELLWDVGAGSGSIGIEWMRAHPTCRAIA---IEANDARQRFIEQNRDAL 347
Query: 122 AARG-KVFACRIQEA 135
G ++ A R +A
Sbjct: 348 GVPGLQLVAGRAPDA 362
>gi|291547716|emb|CBL20824.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Ruminococcus sp. SR1/5]
Length = 248
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 7/86 (8%)
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + P +D+G G GF I+ EG V I+ + V+
Sbjct: 37 ILEYAPEKEHLEVLDVGCGPGFFEIMLG-----KEGHHVTGIDITENMIHEAKENVKAAG 91
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR 148
+ T D++ R
Sbjct: 92 LSADLMTMDCHNLNFPDETFDMVICR 117
>gi|228927259|ref|ZP_04090321.1| Methyltransferase type 12 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832406|gb|EEM77981.1| Methyltransferase type 12 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 292
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 12/127 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
W+ K L D + + S V P +D G G G+ G+I L
Sbjct: 5 DWNSK--LTYLKNTRDLYYNNDYVSFLVNTVWRITKPVHIVDYGCGYGYLGLILMPLLP- 61
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+G I+S + R + + + E ++ T D+ A
Sbjct: 62 -KGSKYTGIDSGGTLLAEARELFRLLPYETQFLEGDATEI-ELNDTYDIAICHAF----- 114
Query: 156 LLEYSFP 162
LL S P
Sbjct: 115 LLHMSSP 121
>gi|194017077|ref|ZP_03055689.1| SAM-dependent methyltransferase YrrM [Bacillus pumilus ATCC 7061]
gi|194010945|gb|EDW20515.1| SAM-dependent methyltransferase YrrM [Bacillus pumilus ATCC 7061]
Length = 221
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 52/142 (36%), Gaps = 30/142 (21%)
Query: 13 NYLLNTYNVSRETLEKLEYFYFL----FLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+Y+ + + S + + +LE + ++ VS + L++ +
Sbjct: 10 DYIEHLIHPSPDAIAQLEAYAKEHHVPIMEK------VSI----ELL-------LQLLSM 52
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +++G+ G+ I + L + E + IE K+ +++ + ++
Sbjct: 53 -KKPKKILEVGTAIGYSAIRMATALPAAE---IFTIERNAKRYEEATRNIEELKLKERIH 108
Query: 129 -----ACRIQEAPQMITTCDVI 145
A + Q + DVI
Sbjct: 109 VFFGDAMESAKTVQTMAPYDVI 130
>gi|330445761|ref|ZP_08309413.1| methyltransferase, enzyme of biotin synthesis [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489952|dbj|GAA03910.1| methyltransferase, enzyme of biotin synthesis [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 274
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 34/115 (29%), Gaps = 18/115 (15%)
Query: 50 TVEDFWIRHV----EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
+ RHV D L P ID+G G G+ + ++
Sbjct: 33 DKAAAFQRHVGHLLLDKLPHLHAVDNPKEVIDVGCGTGYFSAELLKLGFKVTAADLS--- 89
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
A L Q+ + ++ P + D+ A + L L++
Sbjct: 90 -----AEMLTQAKQRCGDDCRYLHADAEKLPVADNSYDL----AFSSLA--LQWC 133
>gi|256833417|ref|YP_003162144.1| methyltransferase small [Jonesia denitrificans DSM 20603]
gi|256686948|gb|ACV09841.1| methyltransferase small [Jonesia denitrificans DSM 20603]
Length = 536
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 8/88 (9%)
Query: 62 SLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
S + Q+ P +D+G+G G + ++ V + + +F R+
Sbjct: 173 SFTLAQVTPRTNVGRVLDIGTGCGVQALA-----ATRHARQVMATDISPRAVAFARFNAA 227
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++ E P T D++ +
Sbjct: 228 LNDSDVEIREGSFFE-PVHGETFDLVVS 254
>gi|238019034|ref|ZP_04599460.1| hypothetical protein VEIDISOL_00896 [Veillonella dispar ATCC 17748]
gi|237864289|gb|EEP65579.1| hypothetical protein VEIDISOL_00896 [Veillonella dispar ATCC 17748]
Length = 195
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
SI +D+G+G G I ++ G V IE +K + ++K V
Sbjct: 34 IEEDSIVLDVGAGTGSISIEAALAAPK---GHVYAIERFDKGIDLINENMKKFNVNNMTV 90
Query: 128 FACRIQEAPQMITTCDVIS 146
+ E + + D +
Sbjct: 91 IKSKAPEGMEELPDLDAVI 109
>gi|225572347|ref|ZP_03781211.1| hypothetical protein RUMHYD_00641 [Blautia hydrogenotrophica DSM
10507]
gi|225040229|gb|EEG50475.1| hypothetical protein RUMHYD_00641 [Blautia hydrogenotrophica DSM
10507]
Length = 256
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G+G GF I+ + + G V ++ K R ++ +
Sbjct: 57 DRPLNVLDIGTGPGFFAILAA-----LRGHKVTAVDMNGKMLVNARKNARRAGVQVNFQQ 111
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D+I +R
Sbjct: 112 VGHE-LPFPEKSFDLILSR 129
>gi|310829813|ref|YP_003962170.1| methyltransferase type 11 [Eubacterium limosum KIST612]
gi|308741547|gb|ADO39207.1| methyltransferase type 11 [Eubacterium limosum KIST612]
Length = 293
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+GSG G + + G V ++ + +R ++ KV
Sbjct: 67 KKQILDIGSGTGAFALPLAAC-----GAAVTALDCSPEMNRIVRQKAREKDLNVKVQTGD 121
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
P D++ ++ L + P+L
Sbjct: 122 FNRLPFETRAYDLVI----GSMNPGLYHPEPFLR 151
>gi|260892125|ref|YP_003238222.1| Domain of unknown function DUF1957 [Ammonifex degensii KC4]
gi|260864266|gb|ACX51372.1| Domain of unknown function DUF1957 [Ammonifex degensii KC4]
Length = 935
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 31/89 (34%), Gaps = 13/89 (14%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RHV D R + +GS PGI IEG V+ +E FL +
Sbjct: 555 RHVYDLTRALAQWDQGITVLTVGS----PGIP---AYEEIEGVKVHRVEVGG--GDFLAW 605
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVI 145
V + R++ + D+I
Sbjct: 606 VENM----NRAMVERMERLKNEGESFDLI 630
>gi|302519280|ref|ZP_07271622.1| methyltransferase [Streptomyces sp. SPB78]
gi|302428175|gb|EFK99990.1| methyltransferase [Streptomyces sp. SPB78]
Length = 223
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFP---GIITS---IQLSSIEGGLVNLIESKNKKASFLRYV 117
+ + P + +D+GSG G P G++ + + + G+V L + A FLR
Sbjct: 45 WLAKELPAEARVLDVGSGTGLPTAKGLVEAGFDVTGVDLSPGMVELATTHVPGARFLR-- 102
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ A E P+ + D I+
Sbjct: 103 --------RDLASLRAEGPEGLGRFDGITC 124
>gi|228915179|ref|ZP_04078774.1| hypothetical protein bthur0012_23990 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228844410|gb|EEM89466.1| hypothetical protein bthur0012_23990 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 233
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FAC 130
+DLGSG G I + IQ SS V+L++S K L+ ++ +
Sbjct: 53 VLDLGSGVGRNSIPIAQKIQNSSGTVTCVHLLDSALTK---LQTYSKEYGVINNIKTEQA 109
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 110 AIENYYIQRNTYDYIV--AVSSLE 131
>gi|82776552|ref|YP_402901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella dysenteriae Sd197]
gi|309789160|ref|ZP_07683753.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella dysenteriae 1617]
gi|81240700|gb|ABB61410.1| possible protoporphyrinogen oxidase [Shigella dysenteriae Sd197]
gi|308922914|gb|EFP68428.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella dysenteriae 1617]
Length = 277
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALARERPDCE---ITAVDRMPDAVAL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|302037420|ref|YP_003797742.1| precorrin-6Y C(5,15)-methyltransferase [Candidatus Nitrospira
defluvii]
gi|300605484|emb|CBK41817.1| Precorrin-6Y C(5,15)-methyltransferase (decarboxylating)
[Candidatus Nitrospira defluvii]
Length = 418
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL Q+ P +W D+G+G G I + G V IE + R V+
Sbjct: 248 SLAALQIRPDSVLW-DIGAGSGSVAIEAACLAPE---GRVYAIEVDPEGVEICRDNVRAH 303
Query: 122 AARGK-VFACRIQEAPQMITTCDVI 145
A V A + EA + T D +
Sbjct: 304 AVDNVQVVAGKAPEALAGLETPDAV 328
>gi|300906881|ref|ZP_07124555.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1]
gi|301305582|ref|ZP_07211673.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
124-1]
gi|300401314|gb|EFJ84852.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1]
gi|300839171|gb|EFK66931.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
124-1]
gi|315254828|gb|EFU34796.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli MS 85-1]
Length = 277
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALARERPDCE---ITAVDRMPDAVAL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|253582800|ref|ZP_04860020.1| precorrin-6B methyltransferase [Fusobacterium varium ATCC 27725]
gi|251835376|gb|EES63917.1| precorrin-6B methyltransferase [Fusobacterium varium ATCC 27725]
Length = 192
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ +L S+ ID+G+G G GI + L G V IE + K +R V+K
Sbjct: 24 SIAKLRL-KEDSVLIDVGAGTGTIGIEAATYLKD---GKVIGIEKEEKGLEVIRENVKKF 79
Query: 122 AARG-KVFACRI-QEAPQMITTCD 143
+ R Q+ P+ T+ D
Sbjct: 80 NLENYYLIHGRAPQDIPE--TSYD 101
>gi|218677892|ref|ZP_03525789.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli CIAT
894]
Length = 183
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + G V + K + + A +
Sbjct: 2 RVLDIGCGGGLLSEPVARM-----GATVTGADPSEKNIGIASTHAKASGVSVDYRAVTAE 56
Query: 134 EAPQMITTCDVI 145
E T D++
Sbjct: 57 ELADAGETFDIV 68
>gi|148825857|ref|YP_001290610.1| hypothetical protein CGSHiEE_04100 [Haemophilus influenzae PittEE]
gi|229846830|ref|ZP_04466937.1| hypothetical protein CGSHi7P49H1_02378 [Haemophilus influenzae
7P49H1]
gi|319896961|ref|YP_004135156.1| methyltransferase type 11 [Haemophilus influenzae F3031]
gi|148716017|gb|ABQ98227.1| hypothetical protein CGSHiEE_04100 [Haemophilus influenzae PittEE]
gi|229810319|gb|EEP46038.1| hypothetical protein CGSHi7P49H1_02378 [Haemophilus influenzae
7P49H1]
gi|317432465|emb|CBY80821.1| Methyltransferase type 11 [Haemophilus influenzae F3031]
Length = 268
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKFGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|126663423|ref|ZP_01734420.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38]
gi|126624371|gb|EAZ95062.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38]
Length = 293
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSI 91
FY L + ++ L+ E+ + +S +P P +D+G+G G I
Sbjct: 80 FYGLQFEVNENT-LIPRPETEELVEW-ILNS--PITHYPLPITILDIGTGSGCIPISLKA 135
Query: 92 QLSSIEGGLVNLIES---KNKKASFLRYV----VQKTAARGKVFACRIQEAPQMITTCDV 144
L +++ E K+ + V +Q + + ++ ++
Sbjct: 136 NLPQANVSAIDVSEKALEVAKRNAVSNKVEINFIQTNILEVEDLSQLPSPNFHHPSSFNI 195
Query: 145 ISA 147
I +
Sbjct: 196 IVS 198
>gi|15801441|ref|NP_287458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 EDL933]
gi|15830971|ref|NP_309744.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 str. Sakai]
gi|168750772|ref|ZP_02775794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4113]
gi|168758137|ref|ZP_02783144.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4401]
gi|168764381|ref|ZP_02789388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4501]
gi|168771101|ref|ZP_02796108.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4486]
gi|168776895|ref|ZP_02801902.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4196]
gi|168782568|ref|ZP_02807575.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4076]
gi|168787716|ref|ZP_02812723.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC869]
gi|168801525|ref|ZP_02826532.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC508]
gi|195939100|ref|ZP_03084482.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 str. EC4024]
gi|208806533|ref|ZP_03248870.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4206]
gi|208815524|ref|ZP_03256703.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4045]
gi|208822687|ref|ZP_03263006.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4042]
gi|209396125|ref|YP_002270146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4115]
gi|217328046|ref|ZP_03444128.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. TW14588]
gi|254792682|ref|YP_003077519.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 str. TW14359]
gi|261224944|ref|ZP_05939225.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
[Escherichia coli O157:H7 str. FRIK2000]
gi|261257199|ref|ZP_05949732.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
[Escherichia coli O157:H7 str. FRIK966]
gi|291282237|ref|YP_003499055.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O55:H7 str. CB9615]
gi|12514925|gb|AAG56070.1|AE005338_10 possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str.
EDL933]
gi|13361182|dbj|BAB35140.1| possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str.
Sakai]
gi|187767812|gb|EDU31656.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4196]
gi|188015064|gb|EDU53186.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4113]
gi|189000050|gb|EDU69036.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4076]
gi|189354975|gb|EDU73394.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4401]
gi|189360088|gb|EDU78507.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4486]
gi|189365629|gb|EDU84045.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4501]
gi|189372472|gb|EDU90888.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC869]
gi|189376321|gb|EDU94737.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC508]
gi|208726334|gb|EDZ75935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4206]
gi|208732172|gb|EDZ80860.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4045]
gi|208738172|gb|EDZ85855.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4042]
gi|209157525|gb|ACI34958.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. EC4115]
gi|209772518|gb|ACI84571.1| possible protoporphyrinogen oxidase [Escherichia coli]
gi|209772520|gb|ACI84572.1| possible protoporphyrinogen oxidase [Escherichia coli]
gi|209772522|gb|ACI84573.1| possible protoporphyrinogen oxidase [Escherichia coli]
gi|209772524|gb|ACI84574.1| possible protoporphyrinogen oxidase [Escherichia coli]
gi|209772526|gb|ACI84575.1| possible protoporphyrinogen oxidase [Escherichia coli]
gi|217318473|gb|EEC26899.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O157:H7 str. TW14588]
gi|254592082|gb|ACT71443.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
[Escherichia coli O157:H7 str. TW14359]
gi|290762110|gb|ADD56071.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli O55:H7 str. CB9615]
gi|320188004|gb|EFW62671.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 str. EC1212]
gi|320643226|gb|EFX12427.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H- str. 493-89]
gi|320648163|gb|EFX16839.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H- str. H 2687]
gi|320653997|gb|EFX22071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320659476|gb|EFX27045.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O55:H7 str. USDA 5905]
gi|320664613|gb|EFX31764.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 str. LSU-61]
gi|326342760|gb|EGD66530.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 str. 1044]
gi|326346387|gb|EGD70124.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 str. 1125]
Length = 277
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALARERPDCE---ITAVDRMPDAVAL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|326790731|ref|YP_004308552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Clostridium lentocellum DSM 5427]
gi|326541495|gb|ADZ83354.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Clostridium lentocellum DSM 5427]
Length = 290
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA--C 130
ID+G+G G I + + + +++ E K A R+ +QK +++
Sbjct: 120 KRGIDIGTGSGCISITLAYYIKELTMCAIDISEEALKVA---RHNIQKHDLEKRIYTLKS 176
Query: 131 RIQEAPQMITTCDVISA 147
+ E D+I +
Sbjct: 177 DVLENYAEEEKVDLIVS 193
>gi|331646530|ref|ZP_08347633.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli M605]
gi|281178398|dbj|BAI54728.1| putative methyltransferase [Escherichia coli SE15]
gi|330911077|gb|EGH39587.1| methylase of polypeptide chain release factor [Escherichia coli
AA86]
gi|331045282|gb|EGI17409.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli M605]
Length = 277
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVAL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|281412831|ref|YP_003346910.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10]
gi|281373934|gb|ADA67496.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10]
Length = 248
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 15/95 (15%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + P +DLG G G + G V L++ + + V ++ +
Sbjct: 36 LEEYLKNPCRVLDLGGGTGKWSLFL-----QERGFEVVLVDP----SKEMLEVAREKGVK 86
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
V A R ++ P + + A L +L Y
Sbjct: 87 NVVEA-RAEDLPFPSGAFEAVLA-----LGDVLSY 115
>gi|78067223|ref|YP_369992.1| UbiE/COQ5 methyltransferase [Burkholderia sp. 383]
gi|77967968|gb|ABB09348.1| UbiE/COQ5 methyltransferase [Burkholderia sp. 383]
Length = 250
Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + V + + + + ++ +
Sbjct: 42 DAAVLDLGCGAGHASFAVA-----PHVRDVVAYDLAAQMLATVDAAARERGLANIRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
++ P T D + +R
Sbjct: 97 PAEQLPFETATFDWVVSR 114
>gi|330465373|ref|YP_004403116.1| type 11 methyltransferase [Verrucosispora maris AB-18-032]
gi|328808344|gb|AEB42516.1| methyltransferase type 11 [Verrucosispora maris AB-18-032]
Length = 362
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+L D+ G G+ I + E ++L + ++A R + A
Sbjct: 175 ARLDAPGRRIADVACGTGWSSIALARAYPQAEVTGLDLDGAALRQAE--RNAAEAGVADR 232
Query: 126 KVFACRIQEAPQMITTCDVI 145
FACR PQ+ D++
Sbjct: 233 VRFACRDAADPQLAGEYDLV 252
>gi|151567849|pdb|2PJD|A Chain A, Crystal Structure Of 16s Rrna Methyltransferase Rsmc
Length = 343
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDXIIS 267
>gi|149928287|ref|ZP_01916530.1| ubiquinone biosynthesis O-methyltransferase [Limnobacter sp.
MED105]
gi|149823016|gb|EDM82258.1| ubiquinone biosynthesis O-methyltransferase [Limnobacter sp.
MED105]
Length = 239
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+D+G GGG + S+ + ++L + K A + +T +
Sbjct: 54 GKRVLDVGCGGGI--LAESMARRGADVLGIDLADKSLKVAELHKL---ETGVNNVNYRFV 108
Query: 131 RIQE-APQMITTCDVISA 147
++ A + T DV++
Sbjct: 109 SAEQLAAEERGTFDVVTC 126
>gi|144898814|emb|CAM75678.1| Ubiquinone biosynthesis O-methyltransferase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 249
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + G V I++ +K + R QK+ + +
Sbjct: 71 TLLDVGCGGGLLSEPLARM-----GFSVTGIDAGDKNIAVARIHAQKSGVAVEYRVGGPE 125
Query: 134 EAPQMITTCDVISA 147
+ + DV+ +
Sbjct: 126 DVAA--ESFDVVLS 137
>gi|73668962|ref|YP_304977.1| methyltransferase [Methanosarcina barkeri str. Fusaro]
gi|72396124|gb|AAZ70397.1| methyltransferase [Methanosarcina barkeri str. Fusaro]
Length = 212
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 27/84 (32%), Gaps = 7/84 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+++ + +D+G G G + + +G V I+ + +K
Sbjct: 14 IYEYIKKDHLILDIGCGFGKVSLQLAF-----QGFYVEGIDINEAGILAAQESARKLNLD 68
Query: 125 GKVF--ACRIQEAPQMITTCDVIS 146
K + P + D++
Sbjct: 69 DKAHFRVGDATDLPYIEDKFDIVI 92
>gi|152978607|ref|YP_001344236.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
succinogenes 130Z]
gi|226712985|sp|A6VMV4|RSMC_ACTSZ RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|150840330|gb|ABR74301.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus succinogenes
130Z]
Length = 333
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 17/91 (18%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG G G G Q V L + + + + GKV A +
Sbjct: 197 VLDLGCGAGVLGAYVKQQNPQAR---VMLTDIHAMALASAERTLAENRLAGKVLASDV-- 251
Query: 135 APQMITTCDVISA------------RALADL 153
+ D+I + RA+++L
Sbjct: 252 FSHIQGKFDLIISNPPFHDGIGTAYRAVSEL 282
>gi|118579892|ref|YP_901142.1| type 11 methyltransferase [Pelobacter propionicus DSM 2379]
gi|118502602|gb|ABK99084.1| Methyltransferase type 11 [Pelobacter propionicus DSM 2379]
Length = 207
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFA 129
+ +D+G GGG+ G+ + + + ++ + +R + + V
Sbjct: 35 EGVCLDMGCGGGYLGLALA----RVTDLRFHFLDQSREMLEIVRANLAANGLENRGDVLE 90
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + +++ +R
Sbjct: 91 GNAESIPLPDRSVNLVISR 109
>gi|332249417|ref|XP_003273857.1| PREDICTED: protein arginine N-methyltransferase 8-like [Nomascus
leucogenys]
Length = 410
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|318061140|ref|ZP_07979861.1| methyltransferase [Streptomyces sp. SA3_actG]
Length = 223
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFP---GIITS---IQLSSIEGGLVNLIESKNKKASFLRYV 117
+ + P + +D+GSG G P G++ + + + G+V L + A FLR
Sbjct: 45 WLAKELPAEARVLDVGSGTGLPTAKGLVEAGFDVTGVDLSPGMVELATTHVPGARFLR-- 102
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ A E P+ + D I+
Sbjct: 103 --------RDLASLRAEGPEGLGRFDGITC 124
>gi|311256351|ref|XP_003126613.1| PREDICTED: protein arginine N-methyltransferase 8-like [Sus scrofa]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|311256347|ref|XP_003126611.1| PREDICTED: protein arginine N-methyltransferase 8-like [Sus scrofa]
Length = 372
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 79 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 133
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 134 NHLDNIITIFKGKVEEVELPVEKVDIIIS 162
>gi|301053082|ref|YP_003791293.1| methyltransferase [Bacillus anthracis CI]
gi|300375251|gb|ADK04155.1| methyltransferase [Bacillus cereus biovar anthracis str. CI]
Length = 258
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
+D+G GGG ++ + V ++ F + ++Q F
Sbjct: 34 QNKRIVDIGCGGGIYTKELALMGAK----SVVGLD-------FSKEILQAAKENCSGFSN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
P T D++ +RA+
Sbjct: 83 ISFIHGDAHSTPYPNDTFDIVISRAV 108
>gi|300118510|ref|ZP_07056249.1| methyltransferase [Bacillus cereus SJ1]
gi|298724034|gb|EFI64737.1| methyltransferase [Bacillus cereus SJ1]
Length = 258
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
+D+G GGG ++ + V ++ F + ++Q F
Sbjct: 34 QNKRIVDIGCGGGIYTKELALMGAK----SVVGLD-------FSKEILQAAKENCSGFSN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
P T D++ +RA+
Sbjct: 83 ISFLHGDAHSTPYPNDTFDIVISRAV 108
>gi|332308961|ref|NP_001193802.1| protein arginine N-methyltransferase 8 [Bos taurus]
gi|296487100|gb|DAA29213.1| protein arginine methyltransferase 8 [Bos taurus]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|296211116|ref|XP_002752271.1| PREDICTED: protein arginine N-methyltransferase 8-like [Callithrix
jacchus]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|291392675|ref|XP_002712862.1| PREDICTED: protein arginine N-methyltransferase 1-like [Oryctolagus
cuniculus]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|289706441|ref|ZP_06502799.1| methyltransferase small domain protein [Micrococcus luteus SK58]
gi|289556936|gb|EFD50269.1| methyltransferase small domain protein [Micrococcus luteus SK58]
Length = 215
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L P ++D+G+G G + ++ E V +E + + R
Sbjct: 55 LSAVPAPPARGAFLDVGAGWGPLALTLALASPEAE---VTGVEVNERSLALARDNAAAVG 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A F ++ P D++ +
Sbjct: 112 ASNARFLTP-EQVPD-DARFDLVWS 134
>gi|301756653|ref|XP_002914161.1| PREDICTED: protein arginine N-methyltransferase 8-like [Ailuropoda
melanoleuca]
gi|281349628|gb|EFB25212.1| hypothetical protein PANDA_002024 [Ailuropoda melanoleuca]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|229090498|ref|ZP_04221736.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus Rock3-42]
gi|228692848|gb|EEL46569.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus Rock3-42]
Length = 258
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
+D+G GGG ++ + V ++ F + ++Q F
Sbjct: 34 QNKRIVDIGCGGGIYTKELALMGAK----SVVGLD-------FSKEILQAAKENCSGFSN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
P T D++ +RA+
Sbjct: 83 ISFIHGDAHSTPYPNDTFDIVISRAV 108
>gi|184155284|ref|YP_001843624.1| ribosomal protein L11 methyltransferase [Lactobacillus fermentum
IFO 3956]
gi|227514620|ref|ZP_03944669.1| ribosomal protein L11 methyltransferase [Lactobacillus fermentum
ATCC 14931]
gi|260662211|ref|ZP_05863107.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
fermentum 28-3-CHN]
gi|226710092|sp|B2GBW2|PRMA_LACF3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|183226628|dbj|BAG27144.1| ribosomal protein L11 methyltransferase [Lactobacillus fermentum
IFO 3956]
gi|227087031|gb|EEI22343.1| ribosomal protein L11 methyltransferase [Lactobacillus fermentum
ATCC 14931]
gi|260553594|gb|EEX26486.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
fermentum 28-3-CHN]
Length = 320
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 22/102 (21%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE------SKNKKASFLRYVVQKTAAR 124
ID+G+G G + SI + G V + KK L + +
Sbjct: 178 GGESMIDVGTGSG----VLSIAAKQLGAGEVWAYDIDDVAVKSAKKNLALNPIAKDVHTG 233
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T D++ A + L E P + Q
Sbjct: 234 VNSL------LDGIHTQVDLVVA------NILAEIILPLVPQ 263
>gi|148667447|gb|EDK99863.1| protein arginine N-methyltransferase 8, isoform CRA_b [Mus
musculus]
gi|149049348|gb|EDM01802.1| rCG30143, isoform CRA_a [Rattus norvegicus]
Length = 334
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 41 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 95
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 96 NHLDNVITIFKGKVEEVELPVEKVDIIIS 124
>gi|114642888|ref|XP_001156225.1| PREDICTED: HMT1 hnRNP methyltransferase-like 4 isoform 2 [Pan
troglodytes]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|114642884|ref|XP_508936.2| PREDICTED: protein arginine N-methyltransferase 8 isoform 4 [Pan
troglodytes]
Length = 385
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 92 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 146
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 147 NHLDNIITIFKGKVEEVELPVEKVDIIIS 175
>gi|114642886|ref|XP_001156280.1| PREDICTED: protein arginine N-methyltransferase 8 isoform 3 [Pan
troglodytes]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|293347076|ref|XP_002726479.1| PREDICTED: protein arginine N-methyltransferase 8-like [Rattus
norvegicus]
Length = 538
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 245 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 299
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 300 NHLDNVITIFKGKVEEVELPVEKVDIIIS 328
>gi|9652074|gb|AAF91390.1|AF263539_1 arginine N-methyltransferase [Homo sapiens]
gi|189055003|dbj|BAG37987.1| unnamed protein product [Homo sapiens]
Length = 334
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 41 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 95
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 96 NHLDNIITIFKGKVEEVELPVEKVDIIIS 124
>gi|73997788|ref|XP_543867.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
methyltransferase-like 4 [Canis familiaris]
Length = 379
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 86 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 140
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 141 NHLDNIITIFKGKVEEVELPVEKVDIIIS 169
>gi|67458806|ref|YP_246430.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia felis
URRWXCal2]
gi|75536745|sp|Q4UME7|UBIG_RICFE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|67004339|gb|AAY61265.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia felis
URRWXCal2]
Length = 244
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 24/136 (17%)
Query: 20 NVSRETLEKLEYFYFLFLKWSK--------KINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
++ ++ LEK E W+K +IN + + + H D + +L
Sbjct: 3 SIDKKELEKFEKISH--NWWNKDGEFGILHRINPIRLEYIIEKITSHYND---ISKLE-- 55
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG + +G V I++ ++ +
Sbjct: 56 ---ILDVGCGGGLIATPLA-----AQGFNVTAIDALQSNIETASTYAKENGVKVNYLQST 107
Query: 132 IQEAPQMITTCDVISA 147
I+E Q DV+
Sbjct: 108 IEEL-QSDKLYDVVIC 122
>gi|41235767|ref|NP_958759.1| protein arginine N-methyltransferase 8 [Mus musculus]
gi|37805413|gb|AAH60250.1| Protein arginine N-methyltransferase 8 [Mus musculus]
Length = 379
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 86 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 140
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 141 NHLDNVITIFKGKVEEVELPVEKVDIIIS 169
>gi|74099699|ref|NP_062828.3| protein arginine N-methyltransferase 8 [Homo sapiens]
gi|88983969|sp|Q9NR22|ANM8_HUMAN RecName: Full=Protein arginine N-methyltransferase 8; AltName:
Full=Heterogeneous nuclear ribonucleoprotein
methyltransferase-like protein 4
gi|119609267|gb|EAW88861.1| protein arginine methyltransferase 8, isoform CRA_a [Homo sapiens]
gi|307685449|dbj|BAJ20655.1| protein arginine methyltransferase 8 [synthetic construct]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|67460300|sp|Q6PAK3|ANM8_MOUSE RecName: Full=Protein arginine N-methyltransferase 8; AltName:
Full=Heterogeneous nuclear ribonucleoprotein
methyltransferase-like protein 4
gi|37619695|tpg|DAA01382.1| TPA_exp: HMT1 hnRNP methyltransferase-like 3 protein [Mus musculus]
Length = 394
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIIKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNVITIFKGKVEEVELPVEKVDIIIS 184
>gi|318081710|ref|ZP_07989022.1| methyltransferase [Streptomyces sp. SA3_actF]
Length = 221
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFP---GIITS---IQLSSIEGGLVNLIESKNKKASFLRYV 117
+ + P + +D+GSG G P G++ + + + G+V L + A FLR
Sbjct: 43 WLAKELPAEARVLDVGSGTGLPTAKGLVEAGFDVTGVDLSPGMVELATTHVPGARFLR-- 100
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ A E P+ + D I+
Sbjct: 101 --------RDLASLRAEGPEGLGRFDGITC 122
>gi|229845335|ref|ZP_04465467.1| hypothetical protein CGSHi6P18H1_02234 [Haemophilus influenzae
6P18H1]
gi|229811788|gb|EEP47485.1| hypothetical protein CGSHi6P18H1_02234 [Haemophilus influenzae
6P18H1]
Length = 268
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKFGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|182436334|ref|YP_001824053.1| putative methyltransferase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464850|dbj|BAG19370.1| putative methyltransferase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 361
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G G + + + V++ S + R ++ F + +
Sbjct: 183 VLDVGTGQGHAVNLLARAFPAGRFTGVDMSRSG---IAAARDEAERLGLPNARF--EVAD 237
Query: 135 APQMITTCDVISARALADLDTLLEYSFP 162
A + D+++A D + + + P
Sbjct: 238 AAGVTGGYDLVTA-----FDVIHDLARP 260
>gi|466533|dbj|BAA05915.1| possibly protoporphyrinogen oxidase [Escherichia coli]
Length = 225
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|110644807|ref|YP_672537.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli 536]
gi|191174543|ref|ZP_03036040.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
F11]
gi|300992719|ref|ZP_07179996.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
gi|123147328|sp|Q0T8U3|RSMC_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|110346399|gb|ABG72636.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
536]
gi|190905189|gb|EDV64831.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
F11]
gi|300305215|gb|EFJ59735.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
gi|323189785|gb|EFZ75063.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
RN587/1]
gi|324007717|gb|EGB76936.1| methyltransferase small domain protein [Escherichia coli MS 57-2]
gi|324014050|gb|EGB83269.1| methyltransferase small domain protein [Escherichia coli MS 60-1]
Length = 343
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLATN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|307544298|ref|YP_003896777.1| 16S ribosomal RNA methyltransferase [Halomonas elongata DSM 2581]
gi|307216322|emb|CBV41592.1| 16S ribosomal RNA m2G1207 methyltransferase [Halomonas elongata DSM
2581]
Length = 329
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 26/88 (29%), Gaps = 13/88 (14%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G G G + G V + R + G+VF
Sbjct: 188 PNQGSVLDMGCGDGIIAAWLA-----RRGLAVTAADVNGFAVEATRRTLATNGLEGEVFH 242
Query: 130 CRIQEAPQMITTCDVISA-------RAL 150
+ A T D I + RA+
Sbjct: 243 SDV-YAGLPQTRFDAIVSNPPFHQERAV 269
>gi|311113255|ref|YP_003984477.1| methyltransferase domain-containing protein [Rothia dentocariosa
ATCC 17931]
gi|310944749|gb|ADP41043.1| methyltransferase domain protein [Rothia dentocariosa ATCC 17931]
Length = 248
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P+ +D+G G G + ++ E V I+ ++ S + +
Sbjct: 96 PHGKYMLDIGCGWGPITLSLAMLAPQSE---VYGIDVNSRSLSLTEQNARALGLHNVSVS 152
Query: 130 CRIQEAPQMITTCDVISA 147
+ P + D I +
Sbjct: 153 TPDEIDPTLR--FDTIWS 168
>gi|293399720|ref|ZP_06643866.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306120|gb|EFE47363.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 198
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G G G GII V +++ + + + +
Sbjct: 51 TLLKRDELQDTILDVGCGYGPIGIIIKHTYPDKH---VEMVDVNPRAIALAKENAKANHV 107
Query: 124 RGKVFACRI 132
++ +
Sbjct: 108 DVQIHESDV 116
>gi|281212567|gb|EFA86727.1| putative protein arginine methyltransferase [Polysphondylium
pallidum PN500]
Length = 354
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--G 125
+ I +D+G+G G I S+ + V IE+ A F + +V+
Sbjct: 61 IDFKDKIVMDVGAGTG----ILSMFAAKCGAAKVYAIEASQM-APFTKSLVKANHLDHII 115
Query: 126 KVFACRIQEAPQ---MITTCDVISA 147
V R+++ + DVI +
Sbjct: 116 TVVHKRVEDIDESDIPQGKVDVIIS 140
>gi|228985990|ref|ZP_04146135.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773702|gb|EEM22123.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 261
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+ + +D+ +GGG + + V ++ K + + F A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFQE-----VVALDLTEKMLENAKKFIISNGHENVTFVA 95
Query: 130 CRIQEAPQMITTCDVISAR 148
++ P + DVI+ R
Sbjct: 96 GNAEDLPFSDSYFDVITCR 114
>gi|123440930|ref|YP_001004921.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|226723586|sp|A1JJ89|RSMC_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|122087891|emb|CAL10679.1| ribosomal RNA small subunit methyltransferase C [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 347
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVEDS----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R DS L P+ +D+G G G + + Q I+ L
Sbjct: 169 VKTLPGVFSRDALDSGSHLLLSTFSEPFKGSVLDVGCGAGVLACVLAQQSPKIKWT---L 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + +V A + + ++I +
Sbjct: 226 SDVSAAAIEASRATLAANNIEAQVIASNV--YSDIKGRFEMIIS 267
>gi|321478680|gb|EFX89637.1| hypothetical protein DAPPUDRAFT_126775 [Daphnia pulex]
Length = 347
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVF 128
I +D+G+G G I S+ + V +E+ A+ R VV K +V
Sbjct: 23 EGKIVMDIGAGTG----ILSLFCAQAGAAKVYAVEASGL-ANVTREVVAKNGFSHVIEVV 77
Query: 129 ACRIQEAPQMIT-TCDVISA 147
+ +E DVI +
Sbjct: 78 HGKAEEIDLPEGAKVDVIVS 97
>gi|320637364|gb|EFX07171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O157:H7 str. G5101]
Length = 277
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALARERPDCE---ITAVDRMPDAVAL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|307704613|ref|ZP_07641515.1| methyltransferase domain protein [Streptococcus mitis SK597]
gi|307621815|gb|EFO00850.1| methyltransferase domain protein [Streptococcus mitis SK597]
Length = 193
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ R ++ +F
Sbjct: 52 VNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINNRALDLARQNAERNKVEATIF 107
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ T D + + RA
Sbjct: 108 QSNI--YEQVEGTFDHVISNPPIRA 130
>gi|221212738|ref|ZP_03585715.1| methyltransferase type 11 [Burkholderia multivorans CGD1]
gi|221167837|gb|EEE00307.1| methyltransferase type 11 [Burkholderia multivorans CGD1]
Length = 284
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 13/90 (14%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G G G + I ++ + +++ R Q
Sbjct: 52 VLDVGCGTG--AVTLEIARRLGADAQCTGVDISARMIDAAHERAKRSGLRVHFVCADAQT 109
Query: 135 APQMITTCDVISA-----------RALADL 153
+ + D+I + RA A+L
Sbjct: 110 HAFVPASVDLIVSRFGVMFFDDPVRAFANL 139
>gi|195570740|ref|XP_002103362.1| GD20372 [Drosophila simulans]
gi|194199289|gb|EDX12865.1| GD20372 [Drosophila simulans]
Length = 477
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI S V I++ + + + + + ++ R
Sbjct: 205 GKTVLDVGCGTG----ILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKVENVELIKGR 260
Query: 132 IQEAPQMITTCDVISA 147
+++ D+I +
Sbjct: 261 LEDTDLPEPKYDIIIS 276
>gi|156935522|ref|YP_001439438.1| 16S ribosomal RNA m2G1207 methyltransferase [Cronobacter sakazakii
ATCC BAA-894]
gi|226712952|sp|A7MGA7|RSMC_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|156533776|gb|ABU78602.1| hypothetical protein ESA_03381 [Cronobacter sakazakii ATCC BAA-894]
Length = 342
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSDLLLSTLSPHTKGKVLDVGCGAGVLAAVLASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+V A + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGFEGEVVASNV--FSEIKGRFDMIIS 267
>gi|302539153|ref|ZP_07291495.1| predicted protein [Streptomyces sp. C]
gi|302448048|gb|EFL19864.1| predicted protein [Streptomyces sp. C]
Length = 388
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ +L +++LG G PG+ ++ + GL +E A+F + +
Sbjct: 106 LQALELGS-GQRYLELGPG---PGVSLALAAAITGPGLATGVERDGPMAAFAQRNLDHLG 161
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
V E + D I
Sbjct: 162 VGAVVIEGDALEGHEARAPYDRI 184
>gi|259047254|ref|ZP_05737655.1| methyltransferase domain protein [Granulicatella adiacens ATCC
49175]
gi|259036304|gb|EEW37559.1| methyltransferase domain protein [Granulicatella adiacens ATCC
49175]
Length = 206
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 23/88 (26%), Gaps = 7/88 (7%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+G G G G+ + + V +++ + R +
Sbjct: 56 VPSSFQEGKLLDVGCGYGPMGLSFAKAYPKMH---VEMVDVNERALELARRNAKANGIEN 112
Query: 126 KVFACRIQEAPQMITTCDVISA----RA 149
+ VI + RA
Sbjct: 113 VLIHESSIYDEINAKDYSVIISNPPIRA 140
>gi|224048391|ref|XP_002194375.1| PREDICTED: coenzyme Q3 homolog, methyltransferase (S. cerevisiae)
[Taeniopygia guttata]
Length = 311
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG +S+ G ++ +E + A + A R + + ++
Sbjct: 89 KILDVGCGGGLLSEPLGRLGASVTG--IDPVEDNIRTADQHKSFDPVLAKRIQYKSSSLE 146
Query: 134 E-APQMITTCDVISARA------LADLDTLLEYSFPWLYQK 167
E + + T DVI A +ADL+T ++ L +
Sbjct: 147 EIVEESMETFDVIV--ASEVVEHVADLETFIKCCSQVLKPE 185
>gi|218692758|ref|YP_002400970.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli ED1a]
gi|226712942|sp|B7MTB6|RSMC_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|218430322|emb|CAR11192.1| 16S RNA m2G1207 methylase [Escherichia coli ED1a]
Length = 343
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLATNGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|45358742|ref|NP_988299.1| methyltransferase [Methanococcus maripaludis S2]
gi|45047608|emb|CAF30735.1| SAM (and some other nucleotide) binding motif:Generic
methyltransferase [Methanococcus maripaludis S2]
Length = 218
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQK-TAARGKVFA 129
ID+GSG G SI L+ + ++ SK+ L+ + R ++
Sbjct: 43 AGNCIDIGSGPG----ALSIALAKQSDFSIRALDFSKHMNEIALKNIADADLNDRIQIVQ 98
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P D+I +R
Sbjct: 99 GDVHNIPIEDNYADLIVSR 117
>gi|326801027|ref|YP_004318846.1| methyltransferase small [Sphingobacterium sp. 21]
gi|326551791|gb|ADZ80176.1| methyltransferase small [Sphingobacterium sp. 21]
Length = 241
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 16/92 (17%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV-------NLIESKNKKASFLR 115
L HP P+ +D+GSG G ++ + + V L + K + F
Sbjct: 32 LGALADHPSPNRILDIGSGTGVIAMMMAQRFPHAIIDAVEKDELAAQLSDKNFKNSIFFN 91
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ C + + D+I +
Sbjct: 92 RIRA---------HCTLFQEFAPPALYDLIVS 114
>gi|332160199|ref|YP_004296776.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318607236|emb|CBY28734.1| ribosomal RNA small subunit methyltransferase C [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664429|gb|ADZ41073.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330860113|emb|CBX70437.1| ribosomal RNA small subunit methyltransferase C [Yersinia
enterocolitica W22703]
Length = 347
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVEDS----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R DS L P+ +D+G G G + + Q I+ L
Sbjct: 169 VKTLPGVFSRDALDSGSHLLLSTFSEPFKGSVLDVGCGAGVLACVLAQQSPKIKWT---L 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + +V A + + ++I +
Sbjct: 226 SDVSAAAIEASRATLAANNIEAQVIASNV--YSDIKGRFEMIIS 267
>gi|238751513|ref|ZP_04613004.1| Tellurite resistance protein tehB [Yersinia rohdei ATCC 43380]
gi|238710231|gb|EEQ02458.1| Tellurite resistance protein tehB [Yersinia rohdei ATCC 43380]
Length = 290
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK NL T + V + P +DLG G G + ++ G
Sbjct: 103 KKYNLT--PTHSEVIE-------AVKTIKP--GKALDLGCGSGRNSLYLNLL-----GFD 146
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++ S L+ V+ + + + D I +
Sbjct: 147 VTAVDKNGDSISNLQQVIAQEELQNITANTYDINQASLDNRYDFILS 193
>gi|222087306|ref|YP_002545843.1| 3-demethylubiquinone-9 3-methyltransferase protein [Agrobacterium
radiobacter K84]
gi|254789984|sp|B9JB78|UBIG_AGRRK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|221724754|gb|ACM27910.1| 3-demethylubiquinone-9 3-methyltransferase protein [Agrobacterium
radiobacter K84]
Length = 248
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + K + + A A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GASVVGADPSEKNIGIASTHAKASGAPVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
++ + T D++
Sbjct: 119 TAEQLAEAGETFDIV 133
>gi|220921097|ref|YP_002496398.1| type 11 methyltransferase [Methylobacterium nodulans ORS 2060]
gi|219945703|gb|ACL56095.1| Methyltransferase type 11 [Methylobacterium nodulans ORS 2060]
Length = 251
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 30/94 (31%), Gaps = 9/94 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGF +I++ V ++ + R+ + A +
Sbjct: 56 GRSVLDIGCNGGF----YAIEMKRRGAARVVGLDEDPDYLAQARFAAEALGAEIEFRQGS 111
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + D++ + L P L
Sbjct: 112 VYDVAALGERFDLVLF-----MGVLYHLRHPLLA 140
>gi|149204341|ref|ZP_01881308.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp. TM1035]
gi|149142226|gb|EDM30273.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp. TM1035]
Length = 251
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + G V ++ + + ++ +
Sbjct: 70 RLLDIGCGGGLLSEPMARL-----GATVVGADAAPRNIPVAQVHAAQSGLDIDYRHTTAE 124
Query: 134 EAPQMITTCDVI 145
+ DV+
Sbjct: 125 DLAAAGEQFDVV 136
>gi|291618242|ref|YP_003520984.1| YfcB [Pantoea ananatis LMG 20103]
gi|291153272|gb|ADD77856.1| YfcB [Pantoea ananatis LMG 20103]
Length = 340
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P +D+ +G G I + E V+ ++ + + +++ V
Sbjct: 159 ITDKPRHILDMCTGSGCIAIACAYAFPDAE---VDAVDISHDALAVAEQNIEEHGLIHHV 215
Query: 128 FACRIQEAPQMIT-TCDVIS 146
R ++ D+I
Sbjct: 216 TPIRADLFRELPPVQYDLIV 235
>gi|289772102|ref|ZP_06531480.1| transferase [Streptomyces lividans TK24]
gi|289702301|gb|EFD69730.1| transferase [Streptomyces lividans TK24]
Length = 253
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSG-GGFPGIITSIQLSSIEGGLVNLIESKNK--KASF 113
RH + +++ P P W+D+G+G FP + + +++ ++ +A
Sbjct: 94 RHRLAARALYRHCPEPESWLDVGTGDAEFP----RTARTHFPYTAFDGLDATHRVLRARA 149
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ V + R A ++ DV+S
Sbjct: 150 VERVEEAFVGRLTDPHI----AARLRERYDVVS 178
>gi|262369774|ref|ZP_06063102.1| methyl transferase [Acinetobacter johnsonii SH046]
gi|262315842|gb|EEY96881.1| methyl transferase [Acinetobacter johnsonii SH046]
Length = 272
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + + + ++ E A + +K F
Sbjct: 104 LPEDARIVDLGTGTGAVALSLACERDTWDITATDIYEPTLAVA---QQNAEKHDLNDVTF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
C AP DVI +
Sbjct: 161 VCGSWFAPLNRKFFDVIVS 179
>gi|229104722|ref|ZP_04235384.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock3-28]
gi|228678786|gb|EEL33001.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock3-28]
Length = 242
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S ++ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEKLSNLFPKAHITAIDFAESM------IAVAKNRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 ERLRLEESYDVIISNA 89
>gi|222036112|emb|CAP78857.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
LF82]
gi|312948999|gb|ADR29826.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
O83:H1 str. NRG 857C]
Length = 343
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLATNGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|261346200|ref|ZP_05973844.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Providencia rustigianii DSM 4541]
gi|282565856|gb|EFB71391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Providencia rustigianii DSM 4541]
Length = 310
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ S + + H V L P +DL +G G I + + E V+ +
Sbjct: 111 LIPRSPIGELINNHF-----VGLLSDEPQTILDLCTGSGCIAIACAHEFPEAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +V R M D+I
Sbjct: 163 DISADVLAVAEQNIANHGLEHRVIPIRSDLFRDMPEVKYDLIV 205
>gi|167846766|ref|ZP_02472274.1| putative methyltransferase [Burkholderia pseudomallei B7210]
Length = 291
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 13/100 (13%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G G G ++ E G ++ + R ++
Sbjct: 41 LVEAARTGRRVLDVGCGAG--ATTLAVAQRLGERGRCVGVDVSRPLIAAARARAERGGVP 98
Query: 125 GKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q + + D I +R A A+L
Sbjct: 99 ASFVHADAQTHAFVPASFDTIISRFGVMFFENAVDAFANL 138
>gi|145634397|ref|ZP_01790107.1| hypothetical protein CGSHiAA_06389 [Haemophilus influenzae PittAA]
gi|145268377|gb|EDK08371.1| hypothetical protein CGSHiAA_06389 [Haemophilus influenzae PittAA]
Length = 268
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKFGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|91214024|ref|YP_544010.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
UTI89]
gi|117626683|ref|YP_860006.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli APEC
O1]
gi|122421235|sp|Q1R2D5|RSMC_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712946|sp|A1AJP2|RSMC_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|91075598|gb|ABE10479.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
UTI89]
gi|115515807|gb|ABJ03882.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
APEC O1]
gi|294491814|gb|ADE90570.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
IHE3034]
gi|307629539|gb|ADN73843.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
UM146]
gi|323950544|gb|EGB46422.1| methyltransferase small domain-containing protein [Escherichia coli
H252]
Length = 343
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLATNGVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|126453010|ref|YP_001064321.1| putative methyltransferase [Burkholderia pseudomallei 1106a]
gi|242316432|ref|ZP_04815448.1| putative methyltransferase [Burkholderia pseudomallei 1106b]
gi|126226652|gb|ABN90192.1| putative methyltransferase [Burkholderia pseudomallei 1106a]
gi|242139671|gb|EES26073.1| putative methyltransferase [Burkholderia pseudomallei 1106b]
Length = 291
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 13/100 (13%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G G G ++ E G ++ + R ++
Sbjct: 41 LVEAARTGRRVLDVGCGAG--ATTLAVAQRLGERGRCVGVDVSRPLIAAARARAERGGVP 98
Query: 125 GKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q + + D I +R A A+L
Sbjct: 99 ASFVHADAQTHAFVPASFDTIISRFGVMFFENAVDAFANL 138
>gi|88602952|ref|YP_503130.1| hypothetical protein Mhun_1685 [Methanospirillum hungatei JF-1]
gi|88188414|gb|ABD41411.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
Length = 264
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 11/87 (12%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV---VQKTA 122
+D+G G G + + + +L + FL + QK
Sbjct: 46 LPPDAKRGKILDIGCGSGMQDLTLARICPDCQITATDLHQP------FLDDLTRRAQKAG 99
Query: 123 ARGKVFACRI--QEAPQMITTCDVISA 147
G++ R P + D+I A
Sbjct: 100 LDGRITTRRASMDNLPFDEKSFDIIWA 126
>gi|70729439|ref|YP_259177.1| UbiE/COQ5 family methlytransferase [Pseudomonas fluorescens Pf-5]
gi|68343738|gb|AAY91344.1| methlytransferase, UbiE/COQ5 family [Pseudomonas fluorescens Pf-5]
Length = 254
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + +DLG G G + + V + + + Q+
Sbjct: 36 LQAEVAGKGTARLLDLGCGAGHVSFHVA-----PQVREVVAYDLSQQMLDVVAGAAQERG 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D + +R
Sbjct: 91 LGNIRTVLGAAERLPFADGEFDFVFSR 117
>gi|323454826|gb|EGB10695.1| hypothetical protein AURANDRAFT_22105 [Aureococcus anophagefferens]
Length = 155
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 5/80 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
H + +D+G+G G + +I + V +E ++ A R + V
Sbjct: 45 HFKDKVVLDVGTGTG----VLAIWAAEAGARRVYAVEQSSEVAECARTMAAHHGVADVVE 100
Query: 129 ACR-IQEAPQMITTCDVISA 147
E + DVI +
Sbjct: 101 VLEGAMEELNVPEKVDVIVS 120
>gi|293476634|ref|ZP_06665042.1| rsmC [Escherichia coli B088]
gi|291321087|gb|EFE60529.1| rsmC [Escherichia coli B088]
Length = 343
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + ++ I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFALHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 CVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|149712354|ref|XP_001493928.1| PREDICTED: protein arginine methyltransferase 8 [Equus caballus]
Length = 394
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +V+
Sbjct: 101 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGAKKVFGIECSS-ISDYSEKIVKA 155
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 156 NHLDNIITIFKGKVEEVELPVEKVDIIIS 184
>gi|114320789|ref|YP_742472.1| methyltransferase type 11 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227183|gb|ABI56982.1| Methyltransferase type 11 [Alkalilimnicola ehrlichii MLHE-1]
Length = 261
Score = 36.2 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 14/102 (13%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +DLGSG G I ++ L V++ E++ KAS L + +
Sbjct: 76 IEAGQVVVDLGSGSGMDTFIAALKALPGGHVIGVDMTEAQRTKASHLAATARI--DNVEF 133
Query: 128 FACRIQEAPQMITTCDVISA-----------RALADLDTLLE 158
I+ P + DV+ + R A+ LL
Sbjct: 134 REGYIETPPVRDGSADVVISNGVINLSAEKERVFAEAARLLR 175
>gi|306815434|ref|ZP_07449583.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
NC101]
gi|305851096|gb|EFM51551.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
NC101]
Length = 343
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLATN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|302871656|ref|YP_003840292.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
obsidiansis OB47]
gi|302574515|gb|ADL42306.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
obsidiansis OB47]
Length = 314
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D+G+G G I +I + V ++ +
Sbjct: 161 AIQNYVKPGMNVLDVGTGSG----ILAIAAKKLLAKRVLAVDIDEVAVKVAKENANLNGV 216
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ + E + D++ A
Sbjct: 217 EIEIKKNNLVEGIE--EKFDIVVA 238
>gi|293433528|ref|ZP_06661956.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
gi|291324347|gb|EFE63769.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 TQRNAQHLAIKNIHI 163
>gi|241206505|ref|YP_002977601.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240860395|gb|ACS58062.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 248
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + K + + A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GASVVGADPSEKNIGIASTHAKASGVSVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+E + T D++
Sbjct: 119 TAEELTEAGETFDIV 133
>gi|158520560|ref|YP_001528430.1| methyltransferase small [Desulfococcus oleovorans Hxd3]
gi|158509386|gb|ABW66353.1| methyltransferase small [Desulfococcus oleovorans Hxd3]
Length = 241
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +DLG+G G +I + + S+ + I+ + + + + R +
Sbjct: 42 GARIVDLGTGCGIIPLILACRHPSVSITGIE-IQPQLAQIATENAAANQMTDRVSIVCAD 100
Query: 132 IQEAPQM--ITTCDVISA 147
I+ A D++
Sbjct: 101 IRNANDHLPAGKADIVVC 118
>gi|118595009|ref|ZP_01552356.1| probable SAM-dependent methyltransferase protein [Methylophilales
bacterium HTCC2181]
gi|118440787|gb|EAV47414.1| probable SAM-dependent methyltransferase protein [Methylophilales
bacterium HTCC2181]
Length = 271
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK---ASFLRYVVQK 120
+ + P +D+GSG G + +G V+ +E A ++ + +
Sbjct: 52 ALKEYLPAAGHVLDIGSGRGISAYAFA-----KDGWQVHALEPDRSNLVGAGAIKKLADE 106
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALA----DLDTLLEYSFPWLYQK 167
+ KV ++ P +T D++ RA+ DL L + + L K
Sbjct: 107 SQLSIKVNQTWGEKLPFADSTFDLVYGRAVLHHANDLKQLCKEASRVLKSK 157
>gi|22537700|ref|NP_688551.1| tellurite resistance protein TehB [Streptococcus agalactiae
2603V/R]
gi|76786919|ref|YP_330182.1| tellurite resistance protein TehB [Streptococcus agalactiae A909]
gi|22534589|gb|AAN00424.1|AE014263_3 tellurite resistance protein TehB [Streptococcus agalactiae
2603V/R]
gi|76561976|gb|ABA44560.1| tellurite resistance protein TehB, putative [Streptococcus
agalactiae A909]
Length = 291
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK L T + + L S +DLG G G + S+ G
Sbjct: 103 KKYGLT--RTHSEV--------IASAPLLSEKSNILDLGCGQGRNSLYLSLL-----GHQ 147
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++S + L + + + I A + D I +
Sbjct: 148 VTSVDSNGQSLVALENMALEEELPYNIKRYDINTAA-IEGHYDFILS 193
>gi|76799722|ref|ZP_00781817.1| tellurite resistance protein TehB [Streptococcus agalactiae 18RS21]
gi|76584926|gb|EAO61589.1| tellurite resistance protein TehB [Streptococcus agalactiae 18RS21]
Length = 204
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK L T + + L S +DLG G G + S+ G
Sbjct: 103 KKYGLT--RTHSEV--------IASAPLLSEKSNILDLGCGQGRNSLYLSLL-----GHQ 147
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++S + L + + + I A + D I +
Sbjct: 148 VTSVDSNGQSLVALENMALEEELPYNIKRYDINTAA-IEGHYDFILS 193
>gi|25011652|ref|NP_736047.1| tellurite resistance protein TehB [Streptococcus agalactiae NEM316]
gi|77413434|ref|ZP_00789626.1| tellurite resistance protein TehB [Streptococcus agalactiae 515]
gi|24413192|emb|CAD47271.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160528|gb|EAO71647.1| tellurite resistance protein TehB [Streptococcus agalactiae 515]
Length = 291
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK L T + + L S +DLG G G + S+ G
Sbjct: 103 KKYGLT--RTHSEV--------IASAPLLSEKSNILDLGCGQGRNSLYLSLL-----GHQ 147
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++S + L + + + I A + D I +
Sbjct: 148 VTSVDSNGQSLVALENMALEEELPYNIKRYDINTAA-IEGHYDFILS 193
>gi|330502852|ref|YP_004379721.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas mendocina NK-01]
gi|328917138|gb|AEB57969.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas mendocina NK-01]
Length = 306
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
LV S + + RH P P+ +DL +G G GI + + E V L
Sbjct: 106 LVPRSPIAELIDRHF------SPWLPIEPARILDLCTGSGCIGIACAYEFPEAE---VVL 156
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT-CDVISA 147
+ + +++ +V+ + ++ D+I +
Sbjct: 157 GDLSFEALEVANLNIERHGLEERVYCVQGDGFAELPGQRFDLIVS 201
>gi|310767483|gb|ADP12433.1| Protein methyltransferase [Erwinia sp. Ejp617]
Length = 281
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L +DLG+G G + + + + V I+ + ++ +
Sbjct: 102 ALAHLPVAAGSILDLGTGSGAIALALASERPDCQ---VIGIDRIPAAVALAQHNAARLGL 158
Query: 124 RGKVF 128
F
Sbjct: 159 TNATF 163
>gi|307706395|ref|ZP_07643206.1| methyltransferase domain protein [Streptococcus mitis SK321]
gi|307618211|gb|EFN97367.1| methyltransferase domain protein [Streptococcus mitis SK321]
Length = 193
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ R ++ +F
Sbjct: 52 VNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINNRALDLARQNAERNKVAATIF 107
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 108 QSNI--YEQVEGKFDHVISNPPIRA 130
>gi|284921024|emb|CBG34089.1| protein methyltransferase hemk (protein-glutamine N
methyltransferase) [Escherichia coli 042]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGGREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQNLAIKNIHI 163
>gi|212275848|ref|NP_001130830.1| hypothetical protein LOC100191934 [Zea mays]
gi|194690226|gb|ACF79197.1| unknown [Zea mays]
Length = 538
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--KTAARGKVF 128
+ +D+G+G G I S+ + V +E+ + R + R V
Sbjct: 185 EGRVVVDVGAGSG----ILSLFAAQAGARHVYAVEASEMAENAQRLMSGNPSLGQRITVI 240
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
+++E ++ D++ + + TLL
Sbjct: 241 RGKVEEV-ELPEKADILIS---EPMGTLL 265
>gi|156043351|ref|XP_001588232.1| hypothetical protein SS1G_10679 [Sclerotinia sclerotiorum 1980]
gi|154695066|gb|EDN94804.1| hypothetical protein SS1G_10679 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 307
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 26/86 (30%), Gaps = 11/86 (12%)
Query: 61 DSLRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D + + + P + +D+G+G G + + + + +L S +
Sbjct: 61 DKIYLAPIKPEEINHVLDVGTGHGTWAVEFATEFPNAHVIGTDLSPSTR----------E 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+ +E D I
Sbjct: 111 SKPENCEFVVADAEETWDFPHKFDFI 136
>gi|154496941|ref|ZP_02035637.1| hypothetical protein BACCAP_01234 [Bacteroides capillosus ATCC
29799]
gi|150273765|gb|EDN00882.1| hypothetical protein BACCAP_01234 [Bacteroides capillosus ATCC
29799]
Length = 241
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 25/89 (28%), Gaps = 5/89 (5%)
Query: 64 RVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK---NKKASFLRYVV 118
V + +D+G G G I ++ + ++ + +
Sbjct: 97 TVLSYLDFDGQGQLLDVGCGSGALSIRVALIWPDAQVTGIDYWGAAYGYGQIMCERNSAS 156
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+ AAR + + D + +
Sbjct: 157 EGVAARCRFQHGDANHLDFTDESFDAVVS 185
>gi|170742853|ref|YP_001771508.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium sp.
4-46]
gi|226725552|sp|B0UAV0|UBIG_METS4 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|168197127|gb|ACA19074.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium sp.
4-46]
Length = 249
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 25/91 (27%), Gaps = 7/91 (7%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
H D L L +D+G GGG + G V ++ +
Sbjct: 52 HHGRDPLGPEPLA--GLTLVDIGCGGGVLSEPLARL-----GARVTGLDPAPTNIRVAKA 104
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ I+ D++ A
Sbjct: 105 HAEEAGVPVDYRPQTIESVVAAGERFDLVVA 135
>gi|134281379|ref|ZP_01768087.1| putative methyltransferase [Burkholderia pseudomallei 305]
gi|167908877|ref|ZP_02495968.1| putative methyltransferase [Burkholderia pseudomallei 112]
gi|217424103|ref|ZP_03455603.1| putative methyltransferase [Burkholderia pseudomallei 576]
gi|237814429|ref|YP_002898880.1| methyltransferase [Burkholderia pseudomallei MSHR346]
gi|254184099|ref|ZP_04890690.1| putative methyltransferase [Burkholderia pseudomallei 1655]
gi|134247046|gb|EBA47132.1| putative methyltransferase [Burkholderia pseudomallei 305]
gi|184214631|gb|EDU11674.1| putative methyltransferase [Burkholderia pseudomallei 1655]
gi|217393166|gb|EEC33188.1| putative methyltransferase [Burkholderia pseudomallei 576]
gi|237506398|gb|ACQ98716.1| methyltransferase [Burkholderia pseudomallei MSHR346]
Length = 291
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 13/100 (13%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G G G ++ E G ++ + R ++
Sbjct: 41 LVEAARTGRRVLDVGCGAG--ATTLAVAQRLGERGRCVGVDVSRPLIAAARARAERGGVP 98
Query: 125 GKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q + + D I +R A A+L
Sbjct: 99 ASFVHADAQTHAFVPASFDTIISRFGVMFFENAVDAFANL 138
>gi|193064883|ref|ZP_03045960.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli E22]
gi|194425825|ref|ZP_03058381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli B171]
gi|260843504|ref|YP_003221282.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
12009]
gi|192927568|gb|EDV82185.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli E22]
gi|194415880|gb|EDX32146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli B171]
gi|257758651|dbj|BAI30148.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
12009]
gi|323162263|gb|EFZ48121.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli E128010]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 39/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
+++ E ++L+ L E +FW +
Sbjct: 44 ETHLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|23015689|ref|ZP_00055458.1| COG2227: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol
methylase [Magnetospirillum magnetotacticum MS-1]
Length = 244
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+GSGGG + G V I++ K + R ++T
Sbjct: 62 EGLSLLDVGSGGGLLSEPLARM-----GFAVTGIDAGEKNVAVARLHAEQTGVMVDYRVA 116
Query: 131 RIQEAPQMITTCDVISA 147
+ DV+ +
Sbjct: 117 TPERL-DPAEAFDVVLS 132
>gi|258515753|ref|YP_003191975.1| Methyltransferase type 11 [Desulfotomaculum acetoxidans DSM 771]
gi|257779458|gb|ACV63352.1| Methyltransferase type 11 [Desulfotomaculum acetoxidans DSM 771]
Length = 263
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +DLGSG GF + G V ++ + S R+
Sbjct: 72 AIEELKNGEVVLDLGSGAGFD--VFLAARKVGPSGNVIGVDMTPEMISKARHNAASMGFS 129
Query: 125 GKVFA-CRIQEAPQMITTCDVISA 147
F I+ P ++ DVI +
Sbjct: 130 NVEFRLGEIEHLPVADSSVDVIIS 153
>gi|298530287|ref|ZP_07017689.1| Methyltransferase type 12 [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509661|gb|EFI33565.1| Methyltransferase type 12 [Desulfonatronospira thiodismutans
ASO3-1]
Length = 263
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +DLG G G + + + G + ++S L+ + +
Sbjct: 37 LALCRYLSKSPAILDLGCGVGGQTLYLA----ELTPGSIVAVDSHTPSIEHLQAAIAQHG 92
Query: 123 ARGKVFAC--RIQEAPQMITTCDVISA 147
+V A + Q + D+I +
Sbjct: 93 LSKRVTAMVKDMDRLEQTPGSFDLIWS 119
>gi|207092963|ref|ZP_03240750.1| glucose-inhibited division protein B [Helicobacter pylori
HPKX_438_AG0C1]
Length = 78
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
R+++ Q + D+I++RA+A L+E S +L K
Sbjct: 1 VKKRLED-YQNLLQVDLITSRAVASSSFLIERSQRFLKDK 39
>gi|165977451|ref|YP_001653044.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|226712984|sp|B0BU33|RSMC_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|165877552|gb|ABY70600.1| putative ribosomal RNA small subunit methyltransferase C
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 329
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R+ + + A G V A
Sbjct: 190 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRHTLAENALDGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSNIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|4455326|emb|CAB36786.1| putative protein [Arabidopsis thaliana]
gi|7270259|emb|CAB80029.1| putative protein [Arabidopsis thaliana]
Length = 296
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + I + L + SK +KA F+ +K +
Sbjct: 61 VEDGQSVLDIGCGWG--SLTLYIARKYSKCKLTGICNSKTQKA-FIDEKCRKLGLQNVEI 117
Query: 129 ACRIQEAPQMITTCDVISA 147
+ T D I +
Sbjct: 118 IAADISTFEHEGTYDRIFS 136
>gi|148543688|ref|YP_001271058.1| HemK family modification methylase [Lactobacillus reuteri DSM
20016]
gi|184153098|ref|YP_001841439.1| putative protoporphyrinogen oxidase [Lactobacillus reuteri JCM
1112]
gi|227363333|ref|ZP_03847462.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus reuteri MM2-3]
gi|325682059|ref|ZP_08161577.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus reuteri MM4-1A]
gi|148530722|gb|ABQ82721.1| modification methylase, HemK family [Lactobacillus reuteri DSM
20016]
gi|183224442|dbj|BAG24959.1| putative protoporphyrinogen oxidase [Lactobacillus reuteri JCM
1112]
gi|227071640|gb|EEI09934.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus reuteri MM2-3]
gi|324978703|gb|EGC15652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus reuteri MM4-1A]
Length = 288
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ++ P +DLG+G G GI +++ + V+L + + + + K
Sbjct: 109 LQEMPSRPLKVLDLGTGSGVIGITLALERPNWH---VSLSDISPAALAVAQENMAKFNLE 165
Query: 125 GKVFACRIQEAPQMITTCDVIS 146
+ + + D+I
Sbjct: 166 LPLIKSDL--FENIDQQYDLIV 185
>gi|325273243|ref|ZP_08139523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas sp. TJI-51]
gi|324101620|gb|EGB99186.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas sp. TJI-51]
Length = 276
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+L P P+ +DLG+G G + + + + + V ++ + A+ Q+ +
Sbjct: 100 TALELQPAAPARVLDLGTGTGAIALALASERPAWQ---VTAVDRVAEAAALAERNRQRLS 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
D+I +
Sbjct: 157 LSNTQVRLSHWFDSLAGERFDLIVS 181
>gi|313890214|ref|ZP_07823849.1| methyltransferase small domain protein [Streptococcus
pseudoporcinus SPIN 20026]
gi|313121575|gb|EFR44679.1| methyltransferase small domain protein [Streptococcus
pseudoporcinus SPIN 20026]
Length = 196
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 10/83 (12%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G I L+ +G + LI+ N+ + ++
Sbjct: 57 EGESLLDVGCGYG----PLGISLAKAQGVIATLIDINNRAIELAQKNATYNKVEVAIYQS 112
Query: 131 RIQEAPQMITTCDVISA----RA 149
I + D I + RA
Sbjct: 113 NI--YENVTGQFDHIISNPPIRA 133
>gi|304439922|ref|ZP_07399816.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371661|gb|EFM25273.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 275
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL-IESKNKKASFLRYVVQKTAARGKV 127
P I +D+G G G + + + + +V I K F + + + A ++
Sbjct: 104 IPDGGIGLDIGCGSG--ALTIACAKKNPKATMVGCDIWRGTYKTEFSKELCENNAKLEEI 161
Query: 128 FACRIQE-----APQMITTCDVISA 147
R +E P + D +++
Sbjct: 162 ANVRFEEGNAVKLPFRDESFDAVTS 186
>gi|269137833|ref|YP_003294533.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202]
gi|267983493|gb|ACY83322.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202]
gi|304557888|gb|ADM40552.1| Ribosomal RNA small subunit methyltransferase C [Edwardsiella tarda
FL6-60]
Length = 378
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 9/99 (9%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
D + SL H +D+G G G + + L +
Sbjct: 210 RDGLDIGSHLLLSSL----PHGLKGNVLDVGCGAGVLSAAIARMSPETR---LTLSDVNA 262
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + + A G+V A + + D+I +
Sbjct: 263 AALTASRQTLAQNAIDGEVLASNV--FSDISGRFDLIIS 299
>gi|262279879|ref|ZP_06057664.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260230|gb|EEY78963.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 181
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ V+ A+ +
Sbjct: 45 QNAHVLDVCTGSGALGFEAL----SRGAASVYMIEPDKTQARFLKDNVELLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|227544507|ref|ZP_03974556.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus reuteri CF48-3A]
gi|300909305|ref|ZP_07126766.1| protein-(glutamine-N5) methyltransferase [Lactobacillus reuteri
SD2112]
gi|112943598|gb|ABI26315.1| modification methylase HemK [Lactobacillus reuteri]
gi|227185530|gb|EEI65601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus reuteri CF48-3A]
gi|300893170|gb|EFK86529.1| protein-(glutamine-N5) methyltransferase [Lactobacillus reuteri
SD2112]
Length = 288
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ++ P +DLG+G G GI +++ + V+L + + + + K
Sbjct: 109 LQEMPSRPLRVLDLGTGSGVIGITLALERPNWH---VSLSDISPAALAIAQENMAKFNLE 165
Query: 125 GKVFACRIQEAPQMITTCDVIS 146
+ + + D+I
Sbjct: 166 LPLIKSDL--FENIDQQYDLIV 185
>gi|15898693|ref|NP_343298.1| hypothetical protein SSO1898 [Sulfolobus solfataricus P2]
gi|284175874|ref|ZP_06389843.1| hypothetical protein Ssol98_14628 [Sulfolobus solfataricus 98/2]
gi|13815158|gb|AAK42088.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261603182|gb|ACX92785.1| Methyltransferase type 11 [Sulfolobus solfataricus 98/2]
Length = 190
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +DLG G GF + + + V I+ + S L+ VQK +
Sbjct: 37 EYLKEDYTIVDLGCGPGFFTTVLARMVK-----TVYAIDPDERAISKLKEKVQKLSLNNV 91
Query: 127 V-FACRIQEAPQMITT-CDVISA 147
+ + Q+ + D + +
Sbjct: 92 IPYVAPAQKLEFIRDKSIDFVFS 114
>gi|26247535|ref|NP_753575.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli CFT073]
gi|91210433|ref|YP_540419.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli UTI89]
gi|110641442|ref|YP_669172.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli 536]
gi|117623430|ref|YP_852343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli APEC O1]
gi|191170952|ref|ZP_03032503.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli F11]
gi|218558141|ref|YP_002391054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli S88]
gi|218689159|ref|YP_002397371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli ED1a]
gi|227886366|ref|ZP_04004171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli 83972]
gi|237705174|ref|ZP_04535655.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA]
gi|300971919|ref|ZP_07171707.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1]
gi|300995965|ref|ZP_07181327.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
200-1]
gi|301046861|ref|ZP_07193978.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
185-1]
gi|331657263|ref|ZP_08358225.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli TA206]
gi|26107936|gb|AAN80135.1|AE016759_409 Protein methyltransferase hemK [Escherichia coli CFT073]
gi|91072007|gb|ABE06888.1| protein methyltransferase HemK [Escherichia coli UTI89]
gi|110343034|gb|ABG69271.1| protein methyltransferase HemK [Escherichia coli 536]
gi|115512554|gb|ABJ00629.1| protein methyltransferase HemK [Escherichia coli APEC O1]
gi|190908684|gb|EDV68272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli F11]
gi|218364910|emb|CAR02606.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli S88]
gi|218426723|emb|CAR07560.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli ED1a]
gi|226899931|gb|EEH86190.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA]
gi|227836570|gb|EEJ47036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli 83972]
gi|294492037|gb|ADE90793.1| protein methyltransferase HemK [Escherichia coli IHE3034]
gi|300301229|gb|EFJ57614.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
185-1]
gi|300304662|gb|EFJ59182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
200-1]
gi|300411044|gb|EFJ94582.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1]
gi|307553267|gb|ADN46042.1| protein methyltransferase HemK [Escherichia coli ABU 83972]
gi|307627265|gb|ADN71569.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli UM146]
gi|315288567|gb|EFU47965.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
110-3]
gi|315290790|gb|EFU50162.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
153-1]
gi|315297346|gb|EFU56626.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 16-3]
gi|323949671|gb|EGB45557.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H252]
gi|323953933|gb|EGB49732.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H263]
gi|324015638|gb|EGB84857.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 60-1]
gi|331055511|gb|EGI27520.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli TA206]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|323977217|gb|EGB72304.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TW10509]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|329726153|gb|EGG62625.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus epidermidis VCU144]
Length = 278
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
L+ FY K ++ L+ E+ + H +L D+G+G G I
Sbjct: 75 LQSFYGYQYKVNQHC-LIPRPETEEVML-HFL------ELCKKTDTIADIGTGSGAIAIT 126
Query: 89 TSIQLSSIEGGLVNLIE 105
+ + +L E
Sbjct: 127 LKLLQPELNVIATDLYE 143
>gi|209918453|ref|YP_002292537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli SE11]
gi|209911712|dbj|BAG76786.1| putative methyltransferase [Escherichia coli SE11]
gi|324017538|gb|EGB86757.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
117-3]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 TQRNAQHLAIKNIHI 163
>gi|195038740|ref|XP_001990802.1| GH19565 [Drosophila grimshawi]
gi|193894998|gb|EDV93864.1| GH19565 [Drosophila grimshawi]
Length = 382
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ +D+G G G I S+ + V ++ N F R V+ +
Sbjct: 93 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVIIDNNLQEI 147
Query: 125 GKVFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 148 ITVVKGKIEEIELPGGIEKVDIIIS 172
>gi|187777116|ref|ZP_02993589.1| hypothetical protein CLOSPO_00661 [Clostridium sporogenes ATCC
15579]
gi|187774044|gb|EDU37846.1| hypothetical protein CLOSPO_00661 [Clostridium sporogenes ATCC
15579]
Length = 402
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 11/49 (22%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + E +K FY+ + KIN I+H+ +S + L
Sbjct: 184 DYTNEQFKKFLDFYYKLKDKNVKIN-----------IKHIANSAALIDL 221
>gi|170683182|ref|YP_001743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli SMS-3-5]
gi|218699919|ref|YP_002407548.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli IAI39]
gi|170520900|gb|ACB19078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli SMS-3-5]
gi|218369905|emb|CAR17680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli IAI39]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 36/111 (32%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ L + +L P +DLG+G G + + + E V+ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEITAVDCM 142
>gi|163850392|ref|YP_001638435.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
extorquens PA1]
gi|163661997|gb|ABY29364.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
extorquens PA1]
Length = 245
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 39/144 (27%), Gaps = 24/144 (16%)
Query: 16 LNTYNVSRETLEKLEYFYF----------LFLKWSKKINLVS-SSTVE-DFWIRHVEDSL 63
+ ++ R+ + + + + K++ V + R D
Sbjct: 1 MTGTSIDRDEVARFDALAARWWDERGPMAVLHKFNPVR--VGYIRDEACRIFER---DPA 55
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
F L ID+G GGG + G V ++ + R +
Sbjct: 56 APFPL--EGLSVIDIGCGGGVLSEPLARL-----GATVTGLDPATGNIAAARAHAEAEGL 108
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
I+ D++ A
Sbjct: 109 TIDYRDETIEAVAARGERFDIVLA 132
>gi|300113122|ref|YP_003759697.1| methyltransferase type 11 [Nitrosococcus watsonii C-113]
gi|299539059|gb|ADJ27376.1| Methyltransferase type 11 [Nitrosococcus watsonii C-113]
Length = 223
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 6/93 (6%)
Query: 58 HVEDSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
H + LR F +DLG G G + + S +V+ ++ + +
Sbjct: 30 HFIELLRGAFPADALSGYVLDLGCGPGDITLRVARAWPSC---IVHGVDGAAAMLHYGQQ 86
Query: 117 VVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
V KT + +V R+ DV+ +
Sbjct: 87 AVSKTRLKARVKFVHGRLPAVRLPRKQYDVLIS 119
>gi|297519416|ref|ZP_06937802.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli OP50]
Length = 144
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G G G + + I + L + R + G+VFA +
Sbjct: 1 MLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAANGVEGEVFASNV-- 55
Query: 135 APQMITTCDVISA 147
++ D+I +
Sbjct: 56 FSEVKGRFDMIIS 68
>gi|291533345|emb|CBL06458.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Megamonas hypermegale ART12/1]
Length = 252
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 9/89 (10%)
Query: 64 RVFQLHPYPS----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+ Q + + +D+G+G GF +I L+ + G + I+ + +
Sbjct: 38 TLLQYISFKANKSIKILDIGTGPGF----FAIILAQL-GFDITAIDYTEQMLLEAKQNAG 92
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISAR 148
K + + Q DVI R
Sbjct: 93 KLSEQIDFQQMDAQNLNFPDEKFDVIVTR 121
>gi|242006508|ref|XP_002424092.1| hexaprenyldihydroxybenzoate methyltransferase, putative [Pediculus
humanus corporis]
gi|212507398|gb|EEB11354.1| hexaprenyldihydroxybenzoate methyltransferase, putative [Pediculus
humanus corporis]
Length = 281
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 45/148 (30%), Gaps = 27/148 (18%)
Query: 39 WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----------YPSIWIDLGSGGGFPGII 88
W++ +L + ++ I+ V D L + +D+G GGG
Sbjct: 51 WNEHGDLKALHSMNKLRIQLVRDGLMYTKKADVENPNGPRPLNGVKILDVGCGGGILSEP 110
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLR-YVVQKTAARGKV--FACRIQEAPQ-MITTCDV 144
+ + V I+ K + + + GK+ I++ D
Sbjct: 111 LARIGAD-----VTGIDPGQKLIDIAKTHAAEDPTVSGKIRYLCESIEDHANGHKEKYDA 165
Query: 145 ISARA------LADLDTLLEYSFPWLYQ 166
+ A +A + LE L
Sbjct: 166 VV--ASEVIEHVASKEIFLESCANVLKP 191
>gi|145588678|ref|YP_001155275.1| ubiquinone biosynthesis O-methyltransferase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145047084|gb|ABP33711.1| 3-demethylubiquinone-9 3-methyltransferase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 229
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 14/94 (14%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
WI+ D +D+G GGG + SI S + ++L + K A
Sbjct: 38 WIKTFID--------LDGKKVLDVGCGGGI--LAESISQSGADTTGIDLSDKALKVAELH 87
Query: 115 RYVVQKTAARGKVFACRIQE-APQMITTCDVISA 147
+ A + + A + DV++
Sbjct: 88 ---ALEVGANLTYRSISAEALAEEQPEQYDVVTC 118
>gi|158320129|ref|YP_001512636.1| arsenite S-adenosylmethyltransferase [Alkaliphilus oremlandii
OhILAs]
gi|158140328|gb|ABW18640.1| Methyltransferase type 11 [Alkaliphilus oremlandii OhILAs]
Length = 263
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +DLGSGGGF + + E G V ++ S R +K+
Sbjct: 78 LKEGEVVLDLGSGGGFDCF---LARRQVGESGYVIGVDMTPDMISLARKNAEKSGYTNVE 134
Query: 128 FA-CRIQEAPQMITTCDVISA 147
F I+ P ++ DVI +
Sbjct: 135 FRLGEIEHLPVPDSSVDVIIS 155
>gi|30020296|ref|NP_831927.1| methyltransferase [Bacillus cereus ATCC 14579]
gi|229127606|ref|ZP_04256595.1| Methyltransferase type 12 [Bacillus cereus BDRD-Cer4]
gi|29895846|gb|AAP09128.1| Methyltransferase [Bacillus cereus ATCC 14579]
gi|228655683|gb|EEL11532.1| Methyltransferase type 12 [Bacillus cereus BDRD-Cer4]
Length = 293
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 17/136 (12%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 2 LETY-----DWNNK--LTYLKNTRDLYYNDDYVSFLVNTVWKITKPVHIVDYGCGYGYLG 54
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + + E ++ D+
Sbjct: 55 LVLMPLLPE--GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI 111
Query: 147 ARALADLDTLLEYSFP 162
A LL + P
Sbjct: 112 CHAF-----LLHMTTP 122
>gi|325273576|ref|ZP_08139802.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas sp. TJI-51]
gi|324101293|gb|EGB98913.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas sp. TJI-51]
Length = 302
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI+ + E V L + + +++ +
Sbjct: 121 WLANEPARILDLCTGSGCIGIVAADVFPEAE---VVLADLSFQALEVANQNIERHGLDAR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFAGLPGQRFDLILS 199
>gi|321313986|ref|YP_004206273.1| putative methyltransferase [Bacillus subtilis BSn5]
gi|320020260|gb|ADV95246.1| putative methyltransferase [Bacillus subtilis BSn5]
Length = 253
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+D+G+G G + S ++ +++ + Q+ A F
Sbjct: 38 EHRVLDIGAGAGHTALAFS---PYVQEC--IGVDATKEMVEVASSFAQEKGAENVRFQQG 92
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D+I+ R
Sbjct: 93 TAESLPFPDDSFDIITCR 110
>gi|227514468|ref|ZP_03944517.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus fermentum ATCC 14931]
gi|260663283|ref|ZP_05864174.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Lactobacillus fermentum 28-3-CHN]
gi|227087154|gb|EEI22466.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus fermentum ATCC 14931]
gi|260552135|gb|EEX25187.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Lactobacillus fermentum 28-3-CHN]
Length = 283
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 9/98 (9%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+ E+ V DS+ +DLG+G G GI +++ + ++ I +
Sbjct: 97 TETEELVEW-VLDSM----PADKELKVLDLGTGSGVIGITLALERPKWQ-VTLSDISAAA 150
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
K + + T +V + D+I
Sbjct: 151 LKIALTNQRLHGTNL-NQVESDLFARLGDQR--FDLIV 185
>gi|254523290|ref|ZP_05135345.1| SAM-dependent methyltransferase [Stenotrophomonas sp. SKA14]
gi|219720881|gb|EED39406.1| SAM-dependent methyltransferase [Stenotrophomonas sp. SKA14]
Length = 275
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 14/102 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +L + +D+G G G + ++ +++ + R
Sbjct: 38 LLVSELPETVTQLLDIGCGTGASLLASAAARPEAHCTGLDISAPM---LALARQRAADAG 94
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q+ P D I +R A A+L
Sbjct: 95 LEADFIVADAQQHPLPPAHYDWIQSRLGVMFFEDSGAAFANL 136
>gi|168002377|ref|XP_001753890.1| protein arginine N-methyltransferase [Physcomitrella patens subsp.
patens]
gi|162694866|gb|EDQ81212.1| protein arginine N-methyltransferase [Physcomitrella patens subsp.
patens]
Length = 383
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK--ASFLRYVVQKTAARGKVF 128
+ + +D+G+G G I S+ + V IE+ A L + R V
Sbjct: 51 HGKVVVDVGAGSG----ILSLFAAQASAKHVYAIEASAMADNARLLIAGSPSLSQRITVI 106
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
+++E ++ D++ + + TLL
Sbjct: 107 HGKVEEV-ELPEKADILIS---DPMGTLL 131
>gi|194468251|ref|ZP_03074237.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Lactobacillus reuteri 100-23]
gi|194453104|gb|EDX42002.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Lactobacillus reuteri 100-23]
Length = 288
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG+G G GI +++ + V+L + + + + K +
Sbjct: 116 PLKVLDLGTGSGVIGITLALERPNWH---VSLSDISPAALAVAQENMAKFNLELPLIKSD 172
Query: 132 IQEAPQMITTCDVIS 146
+ + D+I
Sbjct: 173 L--FENIDQQYDLIV 185
>gi|15604471|ref|NP_220989.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia prowazekii
str. Madrid E]
gi|7674407|sp|Q9ZCT9|UBIG_RICPR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|3861165|emb|CAA15065.1| 3-DEMETHYLUBIQUINONE-9 3-METHYLTRANSFERASE (ubiG) [Rickettsia
prowazekii]
gi|292572247|gb|ADE30162.1| Ubiquinone biosynthesisO-methyltransferase [Rickettsia prowazekii
Rp22]
Length = 252
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + ++G V I++ QK + I+E
Sbjct: 56 ILDVGCGGGLIAAPLA-----LQGFNVTAIDALKSNVETATIYAQKNGLKINYLQATIEE 110
Query: 135 APQMITTCDVISA 147
DV+
Sbjct: 111 LENDKL-YDVVIC 122
>gi|89067459|ref|ZP_01154972.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicola granulosus
HTCC2516]
gi|89047028|gb|EAR53082.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicola granulosus
HTCC2516]
Length = 248
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V ++ + R +++ +
Sbjct: 66 RLLDIGCGGGLLCEPMARLGAE-----VVGADAAPRNIPVARIHAEQSGLEIDYRHTTAE 120
Query: 134 EAPQMITTCDVI 145
+ DV+
Sbjct: 121 AMAEAGEQFDVV 132
>gi|321441967|gb|ADW85398.1| arg methyltransferase [Amauta cacica]
Length = 244
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ + +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHLFKGKVVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIIEANRLDNI 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVDKVDIIIS 95
>gi|300939552|ref|ZP_07154209.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1]
gi|300455556|gb|EFK19049.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 36/111 (32%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ L + +L P +DLG+G G + + + E V+ +
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEITAVDCM 142
>gi|306813890|ref|ZP_07448063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli NC101]
gi|222033011|emb|CAP75751.1| Protein methyltransferase hemK [Escherichia coli LF82]
gi|305852527|gb|EFM52975.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli NC101]
gi|312945842|gb|ADR26669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O83:H1 str. NRG 857C]
gi|320195778|gb|EFW70403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli WV_060327]
gi|324005999|gb|EGB75218.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 57-2]
Length = 277
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|167585803|ref|ZP_02378191.1| Methyltransferase type 11 [Burkholderia ubonensis Bu]
Length = 250
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFAC 130
+ +DLG G G + V + + + + ++ A +
Sbjct: 42 GAAVLDLGCGAGHASFAVA-----PHAREVVAYDLAPQMLATVDAAARERGFANIRTCHG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P T D + +R
Sbjct: 97 PAERLPFDAATFDWVVSR 114
>gi|154294665|ref|XP_001547772.1| hypothetical protein BC1G_13459 [Botryotinia fuckeliana B05.10]
gi|150844594|gb|EDN19787.1| hypothetical protein BC1G_13459 [Botryotinia fuckeliana B05.10]
Length = 262
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 4/85 (4%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S +DLG G G + + G + +++ ++
Sbjct: 28 CAYFLPHLTPTSHILDLGCGPGSITTDIAALIPQ---GSIIGLDAGESVIELANTKAEEL 84
Query: 122 AARGKVFA-CRIQEAPQMITTCDVI 145
F + + P T DV+
Sbjct: 85 GLNNCSFQIGDVMKLPFEDETFDVV 109
>gi|145642087|ref|ZP_01797657.1| hypothetical protein CGSHiR3021_00147 [Haemophilus influenzae
R3021]
gi|145273166|gb|EDK13042.1| hypothetical protein CGSHiR3021_00147 [Haemophilus influenzae
22.4-21]
Length = 199
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKFGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ ++ DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVSQADVVLASRSTLVDDLDDMIE 145
>gi|91794327|ref|YP_563978.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella denitrificans
OS217]
gi|123060654|sp|Q12JX1|RSMC_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|91716329|gb|ABE56255.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella denitrificans
OS217]
Length = 345
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 14/107 (13%)
Query: 44 NLVSSSTVEDFWIRHVEDS---LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
NLV F +H D L + L +D G G G + + +E
Sbjct: 180 NLVGV-----FSEKH-LDLGTELLLSHLPKLEGRVLDFGCGAGVITVALLKAMPKLE--- 230
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ I+ + +Q + KV+ Q+ D I +
Sbjct: 231 LECIDINAMALASCELTLQANKLQAKVYPSDG--LTQVTGAFDAIIS 275
>gi|59712744|ref|YP_205520.1| 16S rRNA m2G1207 methylase [Vibrio fischeri ES114]
gi|75353430|sp|Q5E2W4|RSMC_VIBF1 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|59480845|gb|AAW86632.1| 16S rRNA m2G1207 methylase [Vibrio fischeri ES114]
Length = 339
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I +++++ + ++
Sbjct: 191 LLLQTLPALRGHVLDFGCGAGVIGSVMKTINPKIH---LDMVDISALAIASSIETLKANN 247
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G VFA + I +
Sbjct: 248 LEGNVFASDV--YSDTKENYQFIVS 270
>gi|72383372|ref|YP_292727.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
str. NATL2A]
gi|72003222|gb|AAZ59024.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
str. NATL2A]
Length = 233
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 26/88 (29%), Gaps = 9/88 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ D G G G I + + ++L + + + ++ R
Sbjct: 65 DKSFCDAGCGVGSLSIPLA----KLGAKSIHLSDISEAMINETKSRAKEEGLDFNKLNFR 120
Query: 132 IQEAPQMITTCDVISARALADLDTLLEY 159
+ + + + + LD + Y
Sbjct: 121 TSDLENLKGSFNTVIC-----LDVFIHY 143
>gi|20089201|ref|NP_615276.1| hypothetical protein MA0303 [Methanosarcina acetivorans C2A]
gi|19914076|gb|AAM03756.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 256
Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 12/89 (13%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G G G S+ + + G V I+ K + + A +
Sbjct: 55 RILDVGCGTG----ELSLLFAEM-GHRVTGIDISRKMLKTAKTKAEACRANVTFGEGDAE 109
Query: 134 EAPQMITTCDVISARALADLDTLLEYSFP 162
P ++ D++ +R L ++ P
Sbjct: 110 NPPFEPSSFDIVFSR-------HLLWTLP 131
>gi|313771258|gb|EFS37224.1| methyltransferase domain protein [Propionibacterium acnes HL074PA1]
gi|313811849|gb|EFS49563.1| methyltransferase domain protein [Propionibacterium acnes HL083PA1]
gi|313832037|gb|EFS69751.1| methyltransferase domain protein [Propionibacterium acnes HL007PA1]
gi|313832844|gb|EFS70558.1| methyltransferase domain protein [Propionibacterium acnes HL056PA1]
gi|313839704|gb|EFS77418.1| methyltransferase domain protein [Propionibacterium acnes HL086PA1]
gi|314975277|gb|EFT19372.1| methyltransferase domain protein [Propionibacterium acnes HL053PA1]
gi|314977692|gb|EFT21787.1| methyltransferase domain protein [Propionibacterium acnes HL045PA1]
gi|314985333|gb|EFT29425.1| methyltransferase domain protein [Propionibacterium acnes HL005PA1]
gi|315097083|gb|EFT69059.1| methyltransferase domain protein [Propionibacterium acnes HL038PA1]
gi|327332580|gb|EGE74315.1| methyltransferase domain protein [Propionibacterium acnes HL096PA2]
gi|327446641|gb|EGE93295.1| methyltransferase domain protein [Propionibacterium acnes HL043PA2]
gi|327448916|gb|EGE95570.1| methyltransferase domain protein [Propionibacterium acnes HL043PA1]
gi|328759780|gb|EGF73376.1| methyltransferase domain protein [Propionibacterium acnes HL099PA1]
Length = 289
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 7/85 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V ++ S +D+G G G I + G V +++ S L ++
Sbjct: 76 AAVTEIVEPGSSVLDVGGGTGRFAIPLA-----QRGCRVTVLDRSEDMLSVLESSAEEKD 130
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
V + + D + A
Sbjct: 131 VEIDVVHQ--EWPADLGCQFDSVIA 153
>gi|307545161|ref|YP_003897640.1| 3-demethylubiquinone-9 3-methyltransferase [Halomonas elongata DSM
2581]
gi|307217185|emb|CBV42455.1| 3-demethylubiquinone-9 3-methyltransferase [Halomonas elongata DSM
2581]
Length = 241
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 20/99 (20%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
ID+G GGG + GG+V I+ + R +++
Sbjct: 55 ERRVIDVGCGGGILSESMA-----HRGGIVTGIDLGEAPLAVARRHAEQSGLDIDYRCIS 109
Query: 132 IQE-APQMITTCDVISA--------------RALADLDT 155
++E A Q DV++ RA A L
Sbjct: 110 VEEMAEQHPGEFDVVTCLEMLEHVPDPASVVRACARLAK 148
>gi|300855440|ref|YP_003780424.1| putative methyltransferase [Clostridium ljungdahlii DSM 13528]
gi|300435555|gb|ADK15322.1| putative methyltransferase [Clostridium ljungdahlii DSM 13528]
Length = 245
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 5/78 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G+G GF +I +S + G V ++ + Q + K
Sbjct: 41 DNVKALDIGTGPGF----FAIIMSQM-GYDVTAVDCSTSMLEEAKSNTQLAGVKVKFMKG 95
Query: 131 RIQEAPQMITTCDVISAR 148
++ + + D+I R
Sbjct: 96 DVENLDLPVESFDLIVNR 113
>gi|209526553|ref|ZP_03275079.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
gi|209493059|gb|EDZ93388.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
Length = 289
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Query: 51 VEDFWIRH-VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ W+R D++ V P +DLG G G ++ + E V ++
Sbjct: 83 PNETWVRQEAIDTITV-----KPRRILDLGCGTGSTTLLLKQTFPNAE---VIGLDLSPY 134
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMI-TTCDVISA 147
+ ++ K + +E+ + + D++SA
Sbjct: 135 MLAVAETKAKQAGLDIKFYHGLAEESDRFESQSFDLVSA 173
>gi|82544334|ref|YP_408281.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella boydii Sb227]
gi|157156593|ref|YP_001462465.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli E24377A]
gi|300921822|ref|ZP_07137979.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
182-1]
gi|301327072|ref|ZP_07220354.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1]
gi|81245745|gb|ABB66453.1| possible protoporphyrinogen oxidase [Shigella boydii Sb227]
gi|157078623|gb|ABV18331.1| protein methyltransferase HemK [Escherichia coli E24377A]
gi|300421748|gb|EFK05059.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
182-1]
gi|300846325|gb|EFK74085.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1]
gi|332094776|gb|EGI99820.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella boydii 3594-74]
Length = 277
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGGREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|194709257|pdb|3DMF|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
In Complex With Adomet
gi|194709258|pdb|3DMG|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
In Complex With Adohcy
gi|194709259|pdb|3DMH|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
In Complex With Adomet And Guanosine
Length = 381
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 13/93 (13%)
Query: 62 SLRVFQLHPY--------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
SL + + +DLG+G G + + + V +E
Sbjct: 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAE-----VVGVEDDLASVLS 270
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
L+ ++ A + + + EA D+I
Sbjct: 271 LQKGLEANALKAQALHSDVDEALTEEARFDIIV 303
>gi|195330031|ref|XP_002031712.1| GM26148 [Drosophila sechellia]
gi|194120655|gb|EDW42698.1| GM26148 [Drosophila sechellia]
Length = 397
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 108 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVMDNNLQDV 162
Query: 126 -KVFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 163 ITVVKGKIEEIELPNGIEGVDIIIS 187
>gi|55980502|ref|YP_143799.1| ribosomal RNA small subunit methyltransferase [Thermus thermophilus
HB8]
gi|262118483|pdb|2ZUL|A Chain A, Crystal Structure Of Thermus Thermophilus 16s Rrna
Methyltransferase Rsmc (Ttha0533) In Complex With
Cofactor S-Adenosyl-L-Methionine
gi|281500681|pdb|2ZWV|A Chain A, Crystal Structure Of Thermus Thermophilus 16s Rrna
Methyltransferase Rsmc (Ttha0533)
gi|55771915|dbj|BAD70356.1| probable ribosomal RNA small subunit methyltransferase [Thermus
thermophilus HB8]
Length = 375
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 13/93 (13%)
Query: 62 SLRVFQLHPY--------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
SL + + +DLG+G G + + + V +E
Sbjct: 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAE-----VVGVEDDLASVLS 270
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
L+ ++ A + + + EA D+I
Sbjct: 271 LQKGLEANALKAQALHSDVDEALTEEARFDIIV 303
>gi|332798043|ref|YP_004459542.1| methyltransferase small [Tepidanaerobacter sp. Re1]
gi|332695778|gb|AEE90235.1| methyltransferase small [Tepidanaerobacter sp. Re1]
Length = 251
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 60 EDSLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+ + ID+G+G G ++ S + + E + ++ +A +R V
Sbjct: 33 IDSVLLANFIKADKNDRVIDIGTGSGVIALLLSAKTDAKEIVGIEIVGEAFDRA--VRNV 90
Query: 118 V-QKTAARGKVFACRIQEAPQM--ITTCDVIS 146
+ R K+ ++EA ++ + V+
Sbjct: 91 KMNRLEERVKIVHGDLKEAVKIFGRESFSVVV 122
>gi|300782687|ref|YP_003762978.1| arsenite S-adenosylmethyltransferase [Amycolatopsis mediterranei
U32]
gi|299792201|gb|ADJ42576.1| arsenite S-adenosylmethyltransferase [Amycolatopsis mediterranei
U32]
Length = 241
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 14/99 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L V LHP +DLGSGGG ++++ + +++ + A R+ Q
Sbjct: 60 LAVADLHP-GETVLDLGSGGGLDVLLSARRVGPTGRAIGLDMTDEMLTLAR--RHAEQAG 116
Query: 122 AARGKVFACRIQEAPQMITTCDVISA----------RAL 150
+ I++ P + DV+ + RA+
Sbjct: 117 VTNAEFIKGTIEQIPLPDASVDVVISNCVIALSPNKRAV 155
>gi|299782949|gb|ADJ40947.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
[Lactobacillus fermentum CECT 5716]
Length = 283
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 9/98 (9%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+ E+ V DS+ +DLG+G G GI +++ + ++ I +
Sbjct: 97 TETEELVEW-VLDSM----PADKELKVLDLGTGSGVIGITLALERPKWQ-VTLSDISAAA 150
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
K + + T +V + D+I
Sbjct: 151 LKIALTNQRLHGTNL-NQVESDLFARLGDQR--FDLIV 185
>gi|218704734|ref|YP_002412253.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli UMN026]
gi|293404755|ref|ZP_06648747.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli FVEC1412]
gi|298380398|ref|ZP_06989997.1| HemK protein [Escherichia coli FVEC1302]
gi|300896600|ref|ZP_07115119.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
198-1]
gi|218431831|emb|CAR12716.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli UMN026]
gi|291426963|gb|EFE99989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli FVEC1412]
gi|298277840|gb|EFI19354.1| HemK protein [Escherichia coli FVEC1302]
gi|300359543|gb|EFJ75413.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
198-1]
Length = 277
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQNLAIKNIHI 163
>gi|195390107|ref|XP_002053710.1| GJ24043 [Drosophila virilis]
gi|194151796|gb|EDW67230.1| GJ24043 [Drosophila virilis]
Length = 508
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G G G I SI S V I++ + + V + K+
Sbjct: 236 HGKSVLDVGCGTG----ILSIFASQAGAETVVGIDNSEIVYTAMDIVRKNNVKNVKLVKG 291
Query: 131 RIQEAPQMITTCDVISA 147
R+++ DVI +
Sbjct: 292 RLEDTVLPEDKYDVIIS 308
>gi|158314225|ref|YP_001506733.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EAN1pec]
gi|158109630|gb|ABW11827.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EAN1pec]
Length = 245
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 32 FYFL-FLKWSKKI--NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ L W++ + NL ++ H+ + L +++GSG G G+
Sbjct: 101 YADLPLDAWTQVLTTNLTAT---------HLV-TQGALPLLGDSGTVVNIGSGAGLVGVP 150
Query: 89 TSIQLSSIEGGLVNLIESKNK 109
++ + GL+ L S +K
Sbjct: 151 LRAHYTAAKTGLIGLTRSLSK 171
>gi|46198473|ref|YP_004140.1| ribosomal RNA small subunit methyltransferase C [Thermus
thermophilus HB27]
gi|46196095|gb|AAS80513.1| ribosomal RNA small subunit methyltransferase C [Thermus
thermophilus HB27]
Length = 375
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 13/93 (13%)
Query: 62 SLRVFQLHPY--------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
SL + + +DLG+G G + + + V +E
Sbjct: 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAE-----VVGVEDDLASVLS 270
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
L+ ++ A + + + EA D+I
Sbjct: 271 LQKGLEANALKAQALHSDVDEALTEEARFDIIV 303
>gi|325578169|ref|ZP_08148304.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC
33392]
gi|325159905|gb|EGC72034.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC
33392]
Length = 292
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 35/110 (31%), Gaps = 11/110 (10%)
Query: 45 LVSSSTVEDFWIR--HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS-----IQLSSIE 97
L+ E + H+ L + +P +DLG+G G + + I
Sbjct: 92 LIPRPDTEILVEKALHIA--LEKLEENPPHFRILDLGTGTGAIALALASELSPICQKKHI 149
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++ + + +K + + R + D+I +
Sbjct: 150 QLDVIGVDLMPEVVKLAQSNAEKNQLKVQFLQSRW--FENVEGQFDIIVS 197
>gi|313901649|ref|ZP_07835084.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Thermaerobacter subterraneus DSM 13965]
gi|313468091|gb|EFR63570.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Thermaerobacter subterraneus DSM 13965]
Length = 251
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 27/126 (21%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +L + +D+ G G I + G V ++ + R+ ++
Sbjct: 52 LEELPLDGARVLDVACGTG--EITAMLARRVGPAGRVTGLDFSPGMLAVARHRLEALGLS 109
Query: 125 GKV--FACRIQEAPQMITTCDVISA-----------RALADLDT---------LLEYSF- 161
G+V + P D+++ RALA++ +LE S
Sbjct: 110 GRVELVQGDALDMPFAAGEFDLVTMGFALRNVAGLDRALAEMARVTRPGGRVLILELSHS 169
Query: 162 --PWLY 165
PW+
Sbjct: 170 PWPWVR 175
>gi|299144281|ref|ZP_07037361.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518766|gb|EFI42505.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 264
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 33/97 (34%), Gaps = 9/97 (9%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA----- 111
+ + + + + P +D+G G G + + ++ +V L + K+
Sbjct: 82 KQIIEGIAEYVTIPDGGKGLDVGCGSG--ALTIACAKRNLNSKMVGL-DRWGKEYKNYSR 138
Query: 112 SFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISA 147
+ R + F + T DV+++
Sbjct: 139 ALCRKNAEAEGINNVEFVKGDALKLDFPDETFDVVTS 175
>gi|325678342|ref|ZP_08157964.1| methyltransferase domain protein [Ruminococcus albus 8]
gi|324109963|gb|EGC04157.1| methyltransferase domain protein [Ruminococcus albus 8]
Length = 207
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P + DLG G G + + ++ E +KA + TA R +V
Sbjct: 46 PKMAADLGCGAGRNAGELLKKYPQAKVTAMDYSELSVQKAKKYNQAM-ITAGRCRVIQGD 104
Query: 132 IQEAPQMITTCDVISA 147
+ + P + D+++A
Sbjct: 105 VSKLPLEADSYDLVTA 120
>gi|256788209|ref|ZP_05526640.1| transferase [Streptomyces lividans TK24]
Length = 239
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSG-GGFPGIITSIQLSSIEGGLVNLIESKNK--KASF 113
RH + +++ P P W+D+G+G FP + + +++ ++ +A
Sbjct: 80 RHRLAARALYRHCPEPESWLDVGTGDAEFP----RTARTHFPYTAFDGLDATHRVLRARA 135
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ V + R A ++ DV+S
Sbjct: 136 VERVEEAFVGRLTDPHI----AARLRERYDVVS 164
>gi|253687182|ref|YP_003016372.1| tellurite resistance protein TehB [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753760|gb|ACT11836.1| tellurite resistance protein TehB [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 286
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 33/111 (29%), Gaps = 24/111 (21%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK L T + + Q P +DLG GGG + ++ G
Sbjct: 100 KKYGLT--RTHSEV--------INAVQYIK-PGKTLDLGCGGGRNSLYL-----NLRGFD 143
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQ----EAPQMITTCDVISA 147
V + + L +++ A R ++ D I +
Sbjct: 144 VTACDKHEQSIDSLNNIIKSEALE----HIRAGVYNINLAEIKEQYDFILS 190
>gi|213512702|ref|NP_001133808.1| arginine N-methyltransferase 3 [Salmo salar]
gi|209155404|gb|ACI33934.1| arginine N-methyltransferase 3 [Salmo salar]
Length = 528
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV-VQ 119
D + + + +D+G G G I S+ + +V ++ + V
Sbjct: 242 DFMYLNPEVFKDKVVLDVGCGTG----ILSMFAARAGAKMVIGVDQSEIIYQAMDIVRSN 297
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + RI+E + D+I +
Sbjct: 298 QLQDRVTLIKGRIEEVKLPVEKVDIIIS 325
>gi|195571923|ref|XP_002103950.1| GD20702 [Drosophila simulans]
gi|194199877|gb|EDX13453.1| GD20702 [Drosophila simulans]
Length = 397
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 108 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVMDNNLQDV 162
Query: 127 --VFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 163 ISVVKGKIEEIELPNGIEGVDIIIS 187
>gi|156975686|ref|YP_001446593.1| 16S rRNA m2G 1207 methyltransferase [Vibrio harveyi ATCC BAA-1116]
gi|226713152|sp|A7MUT5|RSMC_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|156527280|gb|ABU72366.1| hypothetical protein VIBHAR_03421 [Vibrio harveyi ATCC BAA-1116]
Length = 341
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I + + + + + ++
Sbjct: 192 LLLETLPKLSGKVLDFGCGAGVLGAFMAKANPEI---AIEMCDINAYAITSSQATLEANG 248
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G+VFA I I +
Sbjct: 249 LSGRVFASDI--YSDTAKDYRFIVS 271
>gi|153835389|ref|ZP_01988056.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Vibrio harveyi
HY01]
gi|148868091|gb|EDL67260.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Vibrio harveyi
HY01]
Length = 341
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I + + + + + ++
Sbjct: 192 LLLETLPKLSGKVLDFGCGAGVLGAFMAKANPEI---AIEMCDINAYAITSSQATLEANG 248
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G+VFA I I +
Sbjct: 249 LSGRVFASDI--YSDTAKDYRFIVS 271
>gi|116812067|emb|CAL26214.1| CG6554 [Drosophila simulans]
Length = 376
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 87 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVMDNNLQDV 141
Query: 127 --VFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 142 ISVVKGKIEEIELPNGIEGVDIIIS 166
>gi|110805217|ref|YP_688737.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella flexneri 5 str. 8401]
gi|110614765|gb|ABF03432.1| possible protoporphyrinogen oxidase [Shigella flexneri 5 str. 8401]
Length = 277
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|74312448|ref|YP_310867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella sonnei Ss046]
gi|191166624|ref|ZP_03028452.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli B7A]
gi|218694726|ref|YP_002402393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli 55989]
gi|300821018|ref|ZP_07101167.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
119-7]
gi|307310033|ref|ZP_07589683.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli W]
gi|309794303|ref|ZP_07688727.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
145-7]
gi|331676992|ref|ZP_08377688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli H591]
gi|73855925|gb|AAZ88632.1| possible protoporphyrinogen oxidase [Shigella sonnei Ss046]
gi|190903273|gb|EDV62994.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli B7A]
gi|218351458|emb|CAU97166.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli 55989]
gi|300526317|gb|EFK47386.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
119-7]
gi|306909751|gb|EFN40245.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli W]
gi|308122208|gb|EFO59470.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
145-7]
gi|315060463|gb|ADT74790.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli W]
gi|320199251|gb|EFW73842.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli EC4100B]
gi|323168382|gb|EFZ54063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella sonnei 53G]
gi|323172434|gb|EFZ58071.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli LT-68]
gi|323185626|gb|EFZ70987.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli 1357]
gi|323378973|gb|ADX51241.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli KO11]
gi|331075681|gb|EGI46979.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli H591]
Length = 277
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|293392981|ref|ZP_06637298.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291424515|gb|EFE97727.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 290
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVED---SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R D SL + L + +D+G G G + + ++ + L
Sbjct: 111 VKTLPGVFSRDGLDVGSSLLLSTLDKHMKGKVLDVGCGAGVMASVMARMSPKVK---LTL 167
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + G+V + + D+I +
Sbjct: 168 SDVNAAAIESSRATLAANGIDGEVIVSNV--YSDISGRFDMIIS 209
>gi|269961960|ref|ZP_06176315.1| Ribosomal RNA small subunit methyltransferase C [Vibrio harveyi
1DA3]
gi|269833283|gb|EEZ87387.1| Ribosomal RNA small subunit methyltransferase C [Vibrio harveyi
1DA3]
Length = 341
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I + + + + + ++
Sbjct: 192 LLLETLPKLSGKVLDFGCGAGVLGAFMAQANPEI---AIEMCDINAYAITSSQATLEANG 248
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G+VFA I I +
Sbjct: 249 LSGRVFASDI--YSDTAKDYRFIVS 271
>gi|260775445|ref|ZP_05884342.1| ribosomal RNA small subunit methyltransferase C [Vibrio
coralliilyticus ATCC BAA-450]
gi|260608626|gb|EEX34791.1| ribosomal RNA small subunit methyltransferase C [Vibrio
coralliilyticus ATCC BAA-450]
Length = 357
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 9/106 (8%)
Query: 45 LVSSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
L ++ + D S + P +D G G G G + + + I+ +
Sbjct: 189 LT-IKSLPGVFSHGQFDIGSQLLLDTLPALSGKVLDFGCGAGVIGSVMATLNAEIK---L 244
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + ++ +G+VFA I I +
Sbjct: 245 EMCDISALAVESSKATLEANGLKGRVFASDI--YSDTSQDYQFIIS 288
>gi|240948233|ref|ZP_04752619.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
NM305]
gi|240297272|gb|EER47813.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
NM305]
Length = 328
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 17/91 (18%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG G G G I+ + + + + + + GKV A +
Sbjct: 192 VLDLGCGAGVIGASLKKMFPKIK---LTMSDIHAMALASSERTLAENQLEGKVIASDV-- 246
Query: 135 APQMITTCDVISA------------RALADL 153
+ D+I + RA+ +L
Sbjct: 247 FSHIDGRFDLIISNPPFHDGIDTAYRAVENL 277
>gi|223039310|ref|ZP_03609599.1| serine protease [Campylobacter rectus RM3267]
gi|222879371|gb|EEF14463.1| serine protease [Campylobacter rectus RM3267]
Length = 300
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + + P S+ +D+G G G + + V +++ + SF R Q
Sbjct: 53 ISLLPIGPEDSV-LDVGCGPGRLIVPLAKI-----ARSVTGVDAFAQMLSFARQNAQNAG 106
Query: 123 ARGKVFACRI---QEAPQMITTCDVIS-ARAL 150
+ F + +A + I DVI +R++
Sbjct: 107 LKNIKFLQKSWLDDDALEAIGKHDVIIASRSV 138
>gi|332022983|gb|EGI63248.1| hypothetical protein G5I_08276 [Acromyrmex echinatior]
Length = 307
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 63 LRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
++ L P +D+GS G + + + +E + + +V K
Sbjct: 139 IQPLILLPTLENKTILDIGSRLG---AVLYGAYVYTDARRIIGVEMNGEFCNLQNEIVCK 195
Query: 121 TAARGKV--FACRIQEAPQMITTCDVIS 146
++ RI+E P++I DVI
Sbjct: 196 FKMDNRISILHKRIEEVPEIIEQSDVII 223
>gi|293604167|ref|ZP_06686575.1| 3-demethylubiquinone-9 3-methyltransferase [Achromobacter
piechaudii ATCC 43553]
gi|292817392|gb|EFF76465.1| 3-demethylubiquinone-9 3-methyltransferase [Achromobacter
piechaudii ATCC 43553]
Length = 242
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 22/134 (16%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----YPSI 74
V+ + E L+ F L +W E +F H + LR+ +
Sbjct: 13 VNADQAE-LDKFSALASRW---------WDPESEFKPLHAINPLRLEWIQECAGNLAGKK 62
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + ++ E ++L + K A ++ + + ++E
Sbjct: 63 VLDVGCGGGI--LSEAMARGGAEVTGIDLADKSLKVARLHGL---ESGVKVEYRKVPVEE 117
Query: 135 -APQMITTCDVISA 147
A + DV++
Sbjct: 118 LAAEQPAQYDVVTC 131
>gi|293414489|ref|ZP_06657138.1| methyltransferase [Escherichia coli B185]
gi|291434547|gb|EFF07520.1| methyltransferase [Escherichia coli B185]
Length = 277
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|268324923|emb|CBH38511.1| conserved hypothetical protein, methyltransferase family
[uncultured archaeon]
Length = 263
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 21/120 (17%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + L NL R + ++F S +D+G+G G I
Sbjct: 32 DDYVALL-------NLSGY--PGSILER-IY---KIFDFQDE-STVLDVGAGTGAFAIPL 77
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRIQE-APQMITTCDVISA 147
+ V ++E + A +L + +V R ++ + + +V+ A
Sbjct: 78 A-----KNVSAVTVVEPSKEMAQYLMKSADRNGLNNIEVITKRWEDISRDDLREYNVVLA 132
>gi|241667854|ref|ZP_04755432.1| HemK family modification methylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876396|ref|ZP_05249106.1| modification methylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842417|gb|EET20831.1| modification methylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 285
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 18/117 (15%)
Query: 39 WSKKINLVS----SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
W++K+ + + + V D ++ +DLG+G G + + +L
Sbjct: 82 WNQKLYVTKDTLIPRADTEVIVAAVLDDIQ---DKNAQLKILDLGAGSGAIALALADELP 138
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI----TTCDVISA 147
+ V+L V +K A K+ ++ T D+I +
Sbjct: 139 RSQVVAVDLYSKTL-------DVAKKNALANKIVNVEFMQSSWYENLDGTKFDIIVS 188
>gi|149910233|ref|ZP_01898878.1| hypothetical protein PE36_03104 [Moritella sp. PE36]
gi|149806702|gb|EDM66667.1| hypothetical protein PE36_03104 [Moritella sp. PE36]
Length = 329
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 5/78 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI-ESKNKKASFLRYVVQKTAARGKVFA 129
+DLG G G + + V++ ES + + +K F
Sbjct: 43 EGKSVLDLGCGSGHRLCGMASMYPETQFVGVDMTAESL----NVALELKEKHNLSNVQFI 98
Query: 130 CRIQEAPQMITTCDVISA 147
E DV+ +
Sbjct: 99 RSAIEDFMTDKKFDVVVS 116
>gi|115389320|ref|XP_001212165.1| HNRNP arginine N-methyltransferase [Aspergillus terreus NIH2624]
gi|114194561|gb|EAU36261.1| HNRNP arginine N-methyltransferase [Aspergillus terreus NIH2624]
Length = 351
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKN 108
+D R DS+ + + +D+G G G I S+ V ++ S
Sbjct: 47 KDDVRTRSYRDSIYQNRHIFKDKVVLDVGCGTG----ILSMFAVKAGAKHVIGVDMSSII 102
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+KA + V A + + +++E D+I +
Sbjct: 103 EKAREI-VAVNGMADKITLLQGKMEEVVLPFPKVDIIIS 140
>gi|293409599|ref|ZP_06653175.1| hypothetical protein ECEG_00538 [Escherichia coli B354]
gi|331672744|ref|ZP_08373530.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli TA280]
gi|291470067|gb|EFF12551.1| hypothetical protein ECEG_00538 [Escherichia coli B354]
gi|331069965|gb|EGI41334.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli TA280]
Length = 277
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQNLAIKNIHI 163
>gi|260892179|ref|YP_003238276.1| glycosyl transferase family 2 [Ammonifex degensii KC4]
gi|260864320|gb|ACX51426.1| glycosyl transferase family 2 [Ammonifex degensii KC4]
Length = 1340
Score = 36.2 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 18/102 (17%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ++ + + +D+G G G G + + +V+ +E + A+ V+ K
Sbjct: 20 LARIPHWARMVLDVGCGAGMLGKALKERNPEV---VVHGVEILPQVAAKAEQVLDK---- 72
Query: 125 GKVFACRIQE--APQMITTCDVISARALADLDTLLE-YSFPW 163
V I++ DVI L +LE + PW
Sbjct: 73 --VIVGNIEKLSLEPPPGGFDVIV------LADVLEHLTDPW 106
>gi|304437464|ref|ZP_07397422.1| UbiE/COQ5 family methyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369514|gb|EFM23181.1| UbiE/COQ5 family methyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 208
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE----SKNKKASFLRYVVQKTAARGK 126
+D G GGG ++ L ++ G V ++ S K A + + + R +
Sbjct: 45 GSEQVLDCGCGGG---ANIAVFLRMVDEGHVTGLDYSSVSVEK-AREVNHAAIEAG-RCE 99
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ +QE P + DV++A
Sbjct: 100 IVQGNVQELPFDDSQFDVVTA 120
>gi|300725760|ref|ZP_07059230.1| methyltransferase small domain protein [Prevotella bryantii B14]
gi|299776933|gb|EFI73473.1| methyltransferase small domain protein [Prevotella bryantii B14]
Length = 247
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES---KNKKASFLRYV 117
DS + L + +D+G+G G ++ + + + + + + E+ K F
Sbjct: 33 DSDLLGTLSAGGNNILDIGTGTGVLSLMLAQRFPNAQIQAIEIDENAVLDAKDNFFASPF 92
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ F I+E + D +
Sbjct: 93 ADRIKLEHIAFQDYIKEVKDTMPIYDSVVC 122
>gi|168014320|ref|XP_001759700.1| protein arginine N-methyltransferase [Physcomitrella patens subsp.
patens]
gi|162689239|gb|EDQ75612.1| protein arginine N-methyltransferase [Physcomitrella patens subsp.
patens]
Length = 383
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK--ASFLRYVVQKTAARGKVF 128
I +D+G+G G I S+ + V +E+ A L + R V
Sbjct: 57 EGKIVVDVGAGSG----ILSLFAAQASAKHVYAVEASAMAEYARKLIAGNHPLSQRITVI 112
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
+++E ++ D++ + + TLL
Sbjct: 113 HGKVEEV-ELPEKADILIS---EPMGTLL 137
>gi|331662615|ref|ZP_08363538.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli TA143]
gi|331061037|gb|EGI33001.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli TA143]
Length = 277
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---ITAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQNLAIKNIHI 163
>gi|268315963|ref|YP_003289682.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252]
gi|262333497|gb|ACY47294.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252]
Length = 194
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 30/98 (30%), Gaps = 17/98 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G G GF +L +E V+L E L Y Q
Sbjct: 37 PRTILDVGCGEGFVAAFLKRRLPEVEMTGVDLSE------EALAYARQHFGELATFRQAD 90
Query: 132 IQEAPQMITTCDVISA-----------RALADLDTLLE 158
I P + D + RA+ +L +
Sbjct: 91 IYRLPFPDRSFDTVVCSEVLEHLDDPDRAVHELKRVAR 128
>gi|13785457|dbj|BAA82207.3| unnamed protein product [Staphylococcus aureus]
gi|195963190|emb|CAQ43015.1| hypothetical protein [Staphylococcus aureus]
gi|221327659|gb|ACM17503.1| methyltransferase type 12 [Staphylococcus aureus]
Length = 203
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S V + P +D+G G G + V I+ N+ L K
Sbjct: 9 SFFVSNMSPKKGRALDIGCGSGLLVEKLASYYDE-----VVGIDISNQM---LDLAKSKR 60
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR 148
V+ E D I +R
Sbjct: 61 QLTNTVYLNMNAEQLNFNEKFDFIVSR 87
>gi|320528150|ref|ZP_08029315.1| methyltransferase domain protein [Solobacterium moorei F0204]
gi|320131498|gb|EFW24063.1| methyltransferase domain protein [Solobacterium moorei F0204]
Length = 250
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 13/94 (13%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
IRH ID+G+G GF I+ S + + ++ E K+A
Sbjct: 39 LIRHF--------PKKKDLKIIDIGTGPGFMAILLS--RAGYQVTGIDCTEEMLKQAH-- 86
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+K + + + DVI R
Sbjct: 87 -ENARKYHLSIRFLKQPAEHLEFEDNSVDVIINR 119
>gi|325104878|ref|YP_004274532.1| Methyltransferase type 11 [Pedobacter saltans DSM 12145]
gi|324973726|gb|ADY52710.1| Methyltransferase type 11 [Pedobacter saltans DSM 12145]
Length = 235
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +D+G G G I QL +++ LV+L KA + + + T +
Sbjct: 48 IPKAKKILDIGCGAGNYTIKVLQQLPNLDCTLVDLSLPMLNKA--VERISKLTNGNIETI 105
Query: 129 ACRIQEAPQMITTCDVISARAL 150
I E P ++ A A+
Sbjct: 106 QGNILELPIRENEYCIVMAGAV 127
>gi|294783327|ref|ZP_06748651.1| methyltransferase [Fusobacterium sp. 1_1_41FAA]
gi|294480205|gb|EFG27982.1| methyltransferase [Fusobacterium sp. 1_1_41FAA]
Length = 514
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 28/89 (31%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
LR+ + +++G G I +++ V ++ + +++
Sbjct: 37 LRLLDFISPDLKNAKVLEIGCSFGGNIIPFAMENPE---ATVVGVDLSKVQVDEGNKIIE 93
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISA 147
+ K+ I + + D I
Sbjct: 94 FLGLKNIKIHHKNILDYNEHFEQFDYIIC 122
>gi|194902210|ref|XP_001980642.1| GG17264 [Drosophila erecta]
gi|190652345|gb|EDV49600.1| GG17264 [Drosophila erecta]
Length = 397
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 108 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVIDNNLQDV 162
Query: 127 --VFACRIQEA--PQMITTCDVISA 147
V +I+E P I D+I +
Sbjct: 163 IKVVKGKIEEVELPNGIEGVDIIIS 187
>gi|308807547|ref|XP_003081084.1| dihydroxypolyprenylbenzoate methyltransferase (ISS) [Ostreococcus
tauri]
gi|116059546|emb|CAL55253.1| dihydroxypolyprenylbenzoate methyltransferase (ISS) [Ostreococcus
tauri]
Length = 351
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 44/141 (31%), Gaps = 19/141 (13%)
Query: 20 NVSRETLEKLEYFYFLFLKWSK---------KINLVSSSTVEDFWIRHVEDSLR--VFQL 68
V K E L+ W++ +N + V D +++L +
Sbjct: 96 QVDPNERAKFERDAALW--WNETRGPFAALHAMNPTRVAFVRDAMREQFKETLGTNAMRD 153
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV- 127
+ +D+G GGG + + + L + +A + + G++
Sbjct: 154 ALRGTRVLDVGCGGGIFAESLARLGADVTAIDAGLANIEIARA----HAARDPGLDGRLR 209
Query: 128 -FACRIQEAPQMITTCDVISA 147
+ T D +++
Sbjct: 210 YEHVAAEALGDRGETFDAVTS 230
>gi|85859820|ref|YP_462022.1| methyltransferase [Syntrophus aciditrophicus SB]
gi|85722911|gb|ABC77854.1| methyltransferase [Syntrophus aciditrophicus SB]
Length = 254
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFL 114
D+L + +D+G+G G +IT+++ + +++ E +++ L
Sbjct: 31 LDALLLAHFIRLRRNESLLDMGTGSGVIALITAMRRPDVRIAGIDIQEEMVEMASRSAAL 90
Query: 115 RYVVQKTAARGKVFAC--RIQEAPQMITTCDVIS 146
+ ++ + RI ++ + D +
Sbjct: 91 NSLEERLTFKAGDIHSIRRIFDS----ESFDAVV 120
>gi|16129175|ref|NP_415730.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli str. K-12 substr. MG1655]
gi|24112611|ref|NP_707121.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella flexneri 2a str. 301]
gi|30062736|ref|NP_836907.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella flexneri 2a str. 2457T]
gi|89108057|ref|AP_001837.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli str. K-12 substr. W3110]
gi|157160717|ref|YP_001458035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli HS]
gi|170020421|ref|YP_001725375.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli ATCC 8739]
gi|170080840|ref|YP_001730160.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|187731012|ref|YP_001879995.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella boydii CDC 3083-94]
gi|188492205|ref|ZP_02999475.1| protein methyltransferase HemK [Escherichia coli 53638]
gi|218553766|ref|YP_002386679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli IAI1]
gi|238900443|ref|YP_002926239.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli BW2952]
gi|256018538|ref|ZP_05432403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella sp. D9]
gi|256023111|ref|ZP_05436976.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia sp. 4_1_40B]
gi|260854873|ref|YP_003228764.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
11368]
gi|260867617|ref|YP_003234019.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
11128]
gi|300816903|ref|ZP_07097123.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
107-1]
gi|300951679|ref|ZP_07165503.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
116-1]
gi|300955612|ref|ZP_07167969.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
175-1]
gi|301029485|ref|ZP_07192567.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
196-1]
gi|312971399|ref|ZP_07785574.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli 1827-70]
gi|331652250|ref|ZP_08353269.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli M718]
gi|331667596|ref|ZP_08368460.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli TA271]
gi|332279598|ref|ZP_08392011.1| protoporphyrinogen oxidase hemK [Shigella sp. D9]
gi|81170789|sp|P0ACC1|HEMK_ECOLI RecName: Full=Protein methyltransferase hemK; AltName:
Full=M.EcoKHemKP; AltName: Full=Protein-(glutamine-N(5))
MTase hemK; AltName: Full=Protein-glutamine
N-methyltransferase hemK
gi|81170790|sp|P0ACC2|HEMK_SHIFL RecName: Full=Protein methyltransferase hemK; AltName:
Full=Protein-(glutamine-N(5)) MTase hemK; AltName:
Full=Protein-glutamine N-methyltransferase hemK
gi|50513699|pdb|1T43|A Chain A, Crystal Structure Analysis Of E.Coli Protein
(N5)-Glutamine Methyltransferase (Hemk)
gi|968931|gb|AAC43438.1| possible protoporphyrinogen oxidase [Escherichia coli]
gi|1651602|dbj|BAA36070.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli str. K12 substr. W3110]
gi|1787463|gb|AAC74296.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli str. K-12 substr. MG1655]
gi|18376673|dbj|BAB84109.1| protein-(glutamine-N5) methyl transferase [Escherichia coli]
gi|24051516|gb|AAN42828.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str. 301]
gi|30040984|gb|AAP16714.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str.
2457T]
gi|157066397|gb|ABV05652.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli HS]
gi|169755349|gb|ACA78048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli ATCC 8739]
gi|169888675|gb|ACB02382.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
[Escherichia coli str. K-12 substr. DH10B]
gi|187428004|gb|ACD07278.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella boydii CDC 3083-94]
gi|188487404|gb|EDU62507.1| protein methyltransferase HemK [Escherichia coli 53638]
gi|218360534|emb|CAQ98092.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli IAI1]
gi|238861844|gb|ACR63842.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
RF-2 [Escherichia coli BW2952]
gi|257753522|dbj|BAI25024.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
11368]
gi|257763973|dbj|BAI35468.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
11128]
gi|260449653|gb|ACX40075.1| modification methylase, HemK family [Escherichia coli DH1]
gi|281600636|gb|ADA73620.1| Protein methyltransferase hemK [Shigella flexneri 2002017]
gi|299877628|gb|EFI85839.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
196-1]
gi|300317505|gb|EFJ67289.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
175-1]
gi|300449125|gb|EFK12745.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
116-1]
gi|300530677|gb|EFK51739.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
107-1]
gi|310335996|gb|EFQ01196.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli 1827-70]
gi|313649401|gb|EFS13832.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri 2a str. 2457T]
gi|315135848|dbj|BAJ43007.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli DH1]
gi|320174902|gb|EFW50021.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella dysenteriae CDC 74-1112]
gi|320185615|gb|EFW60377.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Shigella flexneri CDC 796-83]
gi|323153189|gb|EFZ39451.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli EPECa14]
gi|323179273|gb|EFZ64843.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli 1180]
gi|323942491|gb|EGB38659.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E482]
gi|323947505|gb|EGB43509.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H120]
gi|324117240|gb|EGC11147.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1167]
gi|331050528|gb|EGI22586.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli M718]
gi|331065181|gb|EGI37076.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Escherichia coli TA271]
gi|332101950|gb|EGJ05296.1| protoporphyrinogen oxidase hemK [Shigella sp. D9]
gi|332757865|gb|EGJ88192.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri 4343-70]
gi|332759447|gb|EGJ89755.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri 2747-71]
gi|332760306|gb|EGJ90596.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri K-671]
gi|332767446|gb|EGJ97640.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri 2930-71]
gi|333005051|gb|EGK24571.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri VA-6]
gi|333005663|gb|EGK25181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri K-218]
gi|333007545|gb|EGK27023.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri K-272]
gi|333019222|gb|EGK38509.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri K-304]
gi|333019925|gb|EGK39197.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Shigella flexneri K-227]
Length = 277
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|329117399|ref|ZP_08246116.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Streptococcus parauberis NCFD 2020]
gi|326907804|gb|EGE54718.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Streptococcus parauberis NCFD 2020]
Length = 282
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 39/118 (33%), Gaps = 12/118 (10%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
YF L L +++ L+ E+ SL + + +D+G+G G +
Sbjct: 75 AYFRDLILSVDERV-LIPRPETEELV------SLILEEHSDQSLRVLDIGTGSGAIALGL 127
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + ++ + S + + + ++ D+I +
Sbjct: 128 KKERPNWQ---IDAADISLDALSLAQENGRALDLEINWLHSDL--FSNILDKYDIIVS 180
>gi|317402976|gb|EFV83515.1| 3-demethylubiquinone-9 3-methyltransferase [Achromobacter
xylosoxidans C54]
Length = 242
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 56/156 (35%), Gaps = 36/156 (23%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----YPSI 74
V+ + E L+ F L +W E +F H + LR+ +
Sbjct: 13 VNADQAE-LDKFGALASRW---------WDPESEFKPLHAINPLRLEWIQESVGSLAGKK 62
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + ++ S + ++L + K + L + ++ + + +++
Sbjct: 63 VLDVGCGGGI--LSEAMARSGAQVTGIDLADKSLK-IAKLHGL--ESGVKVEYRKVPVEQ 117
Query: 135 -APQMITTCDVISA--------------RALADLDT 155
A + DV++ RA A L
Sbjct: 118 LAAEQPGQYDVVTCMEMLEHVPDPASIVRACAALTK 153
>gi|299771083|ref|YP_003733109.1| hypothetical protein AOLE_14245 [Acinetobacter sp. DR1]
gi|298701171|gb|ADI91736.1| hypothetical protein AOLE_14245 [Acinetobacter sp. DR1]
Length = 183
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ V+ A+ +
Sbjct: 45 QNAHVLDVCTGSGALGFEAL----SRGAASVYMIEPDKTQARFLKDNVELLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|297561040|ref|YP_003680014.1| methyltransferase type 11 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845488|gb|ADH67508.1| Methyltransferase type 11 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 265
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+D+G G PG IT+ + G V +++ + R ++ A F
Sbjct: 35 GRSLLDVGCG---PGSITADLARRVAPGRVTAVDASAEAVELARASAREAGADNIEFRVG 91
Query: 131 RIQEAPQMITTCDVISA-----------RALADLDTLLE 158
+ + DV+ A RALA++ +
Sbjct: 92 DVHDLDLPDDAFDVVHAHQVLQHVADPVRALAEMRRVAR 130
>gi|195501408|ref|XP_002097783.1| GE26400 [Drosophila yakuba]
gi|194183884|gb|EDW97495.1| GE26400 [Drosophila yakuba]
Length = 516
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI S V I++ + + + + + ++ R
Sbjct: 244 GKTVLDVGCGTG----ILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKVENVELIKGR 299
Query: 132 IQEAPQMITTCDVISA 147
+++ D+I +
Sbjct: 300 LEDTDLPEAKYDIIIS 315
>gi|170746584|ref|YP_001752844.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
radiotolerans JCM 2831]
gi|170653106|gb|ACB22161.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
radiotolerans JCM 2831]
Length = 253
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 20/80 (25%), Gaps = 5/80 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
D+G GGG + G V ++ + + R +
Sbjct: 64 APFPLDGLTICDVGCGGGVLSEPLARL-----GARVTGLDPAEQNVAVARTHAEAAGVPV 118
Query: 126 KVFACRIQEAPQMITTCDVI 145
I+ + D +
Sbjct: 119 DYRGQTIEAVVAGGESFDAV 138
>gi|119489742|ref|ZP_01622500.1| UbiE/COQ5 methyltransferase [Lyngbya sp. PCC 8106]
gi|119454316|gb|EAW35466.1| UbiE/COQ5 methyltransferase [Lyngbya sp. PCC 8106]
Length = 219
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P + +D G+G I+ + Q + ++L E+ K + V+++ + +V
Sbjct: 38 LGPTTAQVLDAGTGTARIPILIAQQRPDWQIIAIDLSENMLK---IGQQNVERSGVQTQV 94
Query: 128 FACR--IQEAPQMITTCDVISA 147
R ++ P + D+I +
Sbjct: 95 KLERVDAKQLPYIEAQFDLIIS 116
>gi|114799822|ref|YP_759346.1| ubiquinone biosynthesis O-methyltransferase [Hyphomonas neptunium
ATCC 15444]
gi|114739996|gb|ABI78121.1| ubiquinone biosynthesis O-methyltransferase [Hyphomonas neptunium
ATCC 15444]
Length = 258
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%)
Query: 39 WSK--------KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIIT 89
W+ + N + + RH L + +L P +D+G GGG
Sbjct: 33 WNPDGKFKPLHRFNPTRLKFIRETAERHF--GLPLGELRPLKGLRLLDIGCGGGLVSEPM 90
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE-APQMITTCDVI 145
+ +++ G V+ E+ K A L + Q+ A + D++
Sbjct: 91 ARLGAAVTG--VDASEANIKTA--LTHASQQ-GLNIDYRAGTAEGLLASGEAAFDIV 142
>gi|73670369|ref|YP_306384.1| methyltransferase [Methanosarcina barkeri str. Fusaro]
gi|72397531|gb|AAZ71804.1| methyltransferase [Methanosarcina barkeri str. Fusaro]
Length = 248
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G G ++ + + G V ++ + R K + +
Sbjct: 49 ILDVGTGPGQ----LALMFAEL-GHHVTAVDLSTRMLDKARKNALKRSLDINFIQGDAEN 103
Query: 135 APQMITTCDVISARALADLDTLLEYSFP 162
DV+S+ L ++ P
Sbjct: 104 LQLPDMQFDVVSS-------KFLLWTLP 124
>gi|4239958|dbj|BAA74757.1| Orf375 [Thermus thermophilus]
Length = 375
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 13/93 (13%)
Query: 62 SLRVFQLHPY--------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
SL + + +DLG+G G + + + V +E
Sbjct: 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAE-----VVGVEDDLASVLS 270
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
L+ ++ A + + + EA D+I
Sbjct: 271 LQKGLEANALKAQALHSDVDEALTEEARFDIIV 303
>gi|302783591|ref|XP_002973568.1| hypothetical protein SELMODRAFT_99727 [Selaginella moellendorffii]
gi|300158606|gb|EFJ25228.1| hypothetical protein SELMODRAFT_99727 [Selaginella moellendorffii]
Length = 367
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 60 EDSLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
S + H +D+G+G G I +I + V +E+ N A R +
Sbjct: 42 YHSAVFKNKRHFQGKTVLDVGTGSG----ILAIWSAQAGAKKVYAVEATNM-ARHARSLA 96
Query: 119 QKTAAR--GKVFACRIQEAPQMITTCDVISA 147
+V I++ DVI +
Sbjct: 97 SANGVSHIVEVIEGSIEDVSIPEKAVDVIIS 127
>gi|256027278|ref|ZP_05441112.1| precorrin-8W decarboxylase [Fusobacterium sp. D11]
gi|289765254|ref|ZP_06524632.1| precorrin-8W decarboxylase [Fusobacterium sp. D11]
gi|289716809|gb|EFD80821.1| precorrin-8W decarboxylase [Fusobacterium sp. D11]
Length = 189
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P SI ID+G+G G GI + + G V IE + K +R V+K
Sbjct: 23 ISIAKLMLKPNSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIRLNVEKF 79
Query: 122 AARG-KVFACRIQEA 135
++ + +A
Sbjct: 80 NLDNFELIHGKAPDA 94
>gi|217967343|ref|YP_002352849.1| ribosomal protein L11 methyltransferase [Dictyoglomus turgidum DSM
6724]
gi|226710074|sp|B8E1A7|PRMA_DICTD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|217336442|gb|ACK42235.1| ribosomal protein L11 methyltransferase [Dictyoglomus turgidum DSM
6724]
Length = 299
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 6/83 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G+G G I SI + G V ++ K + +
Sbjct: 157 LQKYLKEGMDVLDVGTGSG----ILSIVAKKLGGDKVKGVDIDEKAIEVAKKNAEGNHVE 212
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ + + D++ A
Sbjct: 213 VEFQKNDLIDGIN--EKYDIVVA 233
>gi|209521252|ref|ZP_03269973.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Burkholderia sp. H160]
gi|209498330|gb|EDZ98464.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Burkholderia sp. H160]
Length = 294
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE+ + F+
Sbjct: 126 ITLARLAPAPGELLWDVGAGSGSIGIEWMRAHPTCRAIA---IEAHEARQRFIEQNRDAL 182
Query: 122 AARG-KVFACRIQEA 135
G ++ A R +A
Sbjct: 183 GVPGLQLVAGRAPDA 197
>gi|168233806|ref|ZP_02658864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194470184|ref|ZP_03076168.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456548|gb|EDX45387.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205332122|gb|EDZ18886.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 277
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPLKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|282849207|ref|ZP_06258592.1| cyclopropane-fatty-acyl-phospholipid synthase [Veillonella parvula
ATCC 17745]
gi|282580911|gb|EFB86309.1| cyclopropane-fatty-acyl-phospholipid synthase [Veillonella parvula
ATCC 17745]
Length = 390
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L + +D+G G GF I + + ++G L E + KK +
Sbjct: 155 VHHILDKLYL----KEGMTLLDIGCGWGFLLIEAARKY-EVKGYGCTLSEEQWKKG---Q 206
Query: 116 YVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
+++ G+V I ++ T D I +
Sbjct: 207 ERIKEYGLEGQVEIELIDYRDVAASGRTFDRIVS 240
>gi|257051360|ref|YP_003129193.1| Methyltransferase type 12 [Halorhabdus utahensis DSM 12940]
gi|256690123|gb|ACV10460.1| Methyltransferase type 12 [Halorhabdus utahensis DSM 12940]
Length = 472
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEG-GLVNLIESKNKKASFLRYVVQKTA--ARG 125
P +D+G+G G P + + G + +E A L ++ +TA A
Sbjct: 160 LPAQLRVLDIGAGVGGPALGLLDLVCDAGGIVDYHAVEPSA-AADVLSELLDETARNAHT 218
Query: 126 KVFACRIQEAPQMITTCDVIS 146
V R ++ + T D+I
Sbjct: 219 TVHRERAEDF-EPDGTFDLIV 238
>gi|187477843|ref|YP_785867.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella avium 197N]
gi|109895664|sp|Q2L2T5|UBIG_BORA1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|115422429|emb|CAJ48954.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella avium 197N]
Length = 241
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----YPS 73
N++ + E L+ F L +W E +F H + LR+ +
Sbjct: 11 NINVDQAE-LDKFSALAARW---------WDPESEFKPLHAINPLRLEWIQELAGSLQGR 60
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + ++ + + ++L E K A ++ + + A ++
Sbjct: 61 RVLDVGCGGGI--LSEAMAQAGADVTGIDLAEKSLKIARLHGL---ESGVKVEYRAVPVE 115
Query: 134 EAP-QMITTCDVISA 147
E + D+++
Sbjct: 116 ELATEQAGQYDIVTC 130
>gi|91204064|emb|CAJ71717.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 563
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 69 HPYPSIWIDLGSGGGFPG-IITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKTAARG- 125
+DLGSGGG I + + V++ + + A+ R V +
Sbjct: 307 IKSGENVLDLGSGGGIDCFIAAKMAGEQGQIIGVDMTDEMLRNANATREIVARNLGYNNV 366
Query: 126 KVFACRIQEAPQMITTCDVISA 147
+ ++E P D++++
Sbjct: 367 RFMKGFLEEIPVTDECVDLVTS 388
>gi|23097769|ref|NP_691235.1| hypothetical protein OB0314 [Oceanobacillus iheyensis HTE831]
gi|22775993|dbj|BAC12270.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 237
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 10/98 (10%)
Query: 64 RVFQLHP-----YPSIWIDLGSGGGFPGIIT--SIQLSSIEGGLVNLIESKNKKASFLRY 116
V + P P +DLG+G G I +I + V+L++S +K S
Sbjct: 37 SVLDIIPYFRGVEPLEVLDLGAGIGRNSIPVAEAISVGKGSVTCVDLLDSAIEKLSEYSK 96
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLD 154
+ R + I P T D I A++ L+
Sbjct: 97 IYH-VEDRIQAVKQDIGTYPIYPNTYDFII--AVSSLE 131
>gi|186686438|ref|YP_001869634.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
gi|186468890|gb|ACC84691.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
Length = 295
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG G G ++ E ++L +A + +
Sbjct: 101 PRRILDLGCGTGSTTLMLKRAFPEAEVIGLDLSPYMLVRA---EDKARNSGLEIVWRHGN 157
Query: 132 IQEAPQMITTCDVISA 147
++ T D+++A
Sbjct: 158 AEKTSFRDATFDLVTA 173
>gi|327459751|gb|EGF06091.1| methyltransferase domain protein [Streptococcus sanguinis SK1057]
Length = 195
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ +G +++ + + ++
Sbjct: 50 LSVLDF-EAGERVLDVGCGYG----PLGLTLAKAQGVTATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D I + RA
Sbjct: 105 VSAHIFQSNV--YEKVNGIFDHIISNPPIRA 133
>gi|326332231|ref|ZP_08198511.1| putative methyltransferase small domain protein [Nocardioidaceae
bacterium Broad-1]
gi|325949937|gb|EGD41997.1| putative methyltransferase small domain protein [Nocardioidaceae
bacterium Broad-1]
Length = 202
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G G G G+ ++ S + V ++ + K G +
Sbjct: 60 PEGGRILDMGCGYGIIGLACALAAPSAQ---VTGVDVNERAVLLANENAAKLGL-GDRYR 115
Query: 130 CRIQEAPQMITTCDVISA 147
+ TT D I +
Sbjct: 116 AAVPAEIDPGTTYDEIWS 133
>gi|319896430|ref|YP_004134623.1| ribosomal RNA small subunit methyltransferase c [Haemophilus
influenzae F3031]
gi|317431932|emb|CBY80280.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
influenzae F3031]
Length = 330
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + + + + + + + R + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSMIKKRAPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 248 V--FSDIEGKFDLIIS 261
>gi|312172220|emb|CBX80477.1| K02493 methyltransferase [Erwinia amylovora ATCC BAA-2158]
Length = 295
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L +DLG+G G + + + + ++ I+ + ++ +
Sbjct: 102 ALAHLPDAACSILDLGTGSGAIALALASERPDCQ---ISGIDRIPAAVALAQHNAARLGL 158
Query: 124 RGKVF 128
F
Sbjct: 159 ANATF 163
>gi|254282238|ref|ZP_04957206.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [gamma proteobacterium NOR51-B]
gi|219678441|gb|EED34790.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [gamma proteobacterium NOR51-B]
Length = 301
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P +D+ GGG GI+ + + G V ++ K + + +
Sbjct: 114 SPWWVGGVPERIVDVCCGGGSLGILAATEFP---GAEVLCLDIDEKALALAEENIARHGL 170
Query: 124 RGKVFACRIQEAPQM-ITTCDVISA 147
+G++ R + + D+I A
Sbjct: 171 QGQISTVRADLLGPLSPDSVDIILA 195
>gi|212695384|ref|ZP_03303512.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855]
gi|212662019|gb|EEB22593.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855]
Length = 278
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGSGGGFPGII 88
E FY L + +K + L+ + + + H Y + +D+G+G G +
Sbjct: 76 EEFYGLTFEVNKHV-LIPRPETGELVD-------WIIREHKYGRVKILDIGTGSGCIAVS 127
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++E V + K ++ R + + A DVI +
Sbjct: 128 LT---KNLEEAEVVSWDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVS 183
>gi|195328821|ref|XP_002031110.1| GM25795 [Drosophila sechellia]
gi|194120053|gb|EDW42096.1| GM25795 [Drosophila sechellia]
Length = 516
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI S V I++ + + + + + ++ R
Sbjct: 244 GKTVLDVGCGTG----ILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKIENVELIKGR 299
Query: 132 IQEAPQMITTCDVISA 147
+++ D+I +
Sbjct: 300 LEDTDLPEPKYDIIIS 315
>gi|183599681|ref|ZP_02961174.1| hypothetical protein PROSTU_03170 [Providencia stuartii ATCC 25827]
gi|188021935|gb|EDU59975.1| hypothetical protein PROSTU_03170 [Providencia stuartii ATCC 25827]
Length = 310
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ S + + H V L P +D+ +G G I + + E V+ +
Sbjct: 111 LIPRSPIGELINNHF-----VGLLADEPRTILDMCTGSGCIAIACAYEFPEAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + + +V R M D+I
Sbjct: 163 DISTDVLAVTEHNIANHGLEHRVIPIRSDLFRDMPDVKYDLIV 205
>gi|148827172|ref|YP_001291925.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittGG]
gi|226712956|sp|A5UFI6|RSMC_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|148718414|gb|ABQ99541.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
PittGG]
Length = 330
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + + + + + + + R + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSMIKKRAPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 248 V--FSDIEGKFDLIIS 261
>gi|15924643|ref|NP_372177.1| hypothetical protein SAV1653 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926493|ref|NP_374026.1| hypothetical protein SA0767 [Staphylococcus aureus subsp. aureus
N315]
gi|15927233|ref|NP_374766.1| hypothetical protein SA1479 [Staphylococcus aureus subsp. aureus
N315]
gi|15927722|ref|NP_375255.1| hypothetical protein SA1950 [Staphylococcus aureus subsp. aureus
N315]
gi|15928176|ref|NP_375709.1| hypothetical protein SA2383 [Staphylococcus aureus subsp. aureus
N315]
gi|49482297|ref|YP_039521.1| hypothetical protein SAR0049 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49483898|ref|YP_041122.1| hypothetical protein SAR1734 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|57865852|ref|YP_190054.1| hypothetical protein SERP2512 [Staphylococcus epidermidis RP62A]
gi|57867108|ref|YP_188792.1| Tn554 hypothetical protein [Staphylococcus epidermidis RP62A]
gi|57867247|ref|YP_188913.1| Tn554 hypothetical protein [Staphylococcus epidermidis RP62A]
gi|148266483|ref|YP_001245426.1| methyltransferase type 12 [Staphylococcus aureus subsp. aureus JH9]
gi|148268135|ref|YP_001247078.1| methyltransferase type 12 [Staphylococcus aureus subsp. aureus JH9]
gi|150392516|ref|YP_001315191.1| methyltransferase type 12 [Staphylococcus aureus subsp. aureus JH1]
gi|150394202|ref|YP_001316877.1| methyltransferase type 12 [Staphylococcus aureus subsp. aureus JH1]
gi|156979971|ref|YP_001442230.1| hypothetical protein SAHV_1640 [Staphylococcus aureus subsp. aureus
Mu3]
gi|221140092|ref|ZP_03564585.1| hypothetical protein SauraJ_00480 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|254663979|ref|ZP_05143451.1| hypothetical protein SauraM_00235 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|255006440|ref|ZP_05145041.2| hypothetical protein SauraM_08225 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257428437|ref|ZP_05604835.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431606|ref|ZP_05607974.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257793732|ref|ZP_05642711.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258407520|ref|ZP_05680661.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258422471|ref|ZP_05685382.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258447342|ref|ZP_05695488.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258448317|ref|ZP_05696442.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258451919|ref|ZP_05699936.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|258454556|ref|ZP_05702522.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|282929823|ref|ZP_06336966.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|293503530|ref|ZP_06667377.1| hypothetical protein SCAG_02052 [Staphylococcus aureus subsp.
aureus 58-424]
gi|294618190|ref|ZP_06697777.1| putative methyltransferase type 12 [Enterococcus faecium E1679]
gi|295407726|ref|ZP_06817511.1| hypothetical protein SMAG_02895 [Staphylococcus aureus A8819]
gi|295429355|ref|ZP_06821973.1| hypothetical protein SIAG_02779 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297246801|ref|ZP_06930610.1| hypothetical protein SLAG_02846 [Staphylococcus aureus A8796]
gi|304378948|ref|ZP_07361712.1| cyclopropane-fatty-acyl-phospholipid synthase [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|581278|emb|CAA26967.1| unnamed protein product [Staphylococcus aureus]
gi|13700707|dbj|BAB42004.1| hypothetical protein within Tn554 [Staphylococcus aureus subsp.
aureus N315]
gi|13701451|dbj|BAB42745.1| hypothetical protein [Staphylococcus aureus subsp. aureus N315]
gi|13701942|dbj|BAB43234.1| hypothetical protein [Staphylococcus aureus subsp. aureus N315]
gi|13702547|dbj|BAB43688.1| hypothetical protein [Staphylococcus aureus subsp. aureus N315]
gi|14247425|dbj|BAB57815.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|28465857|dbj|BAC57475.1| hypothetical protein [Staphylococcus aureus]
gi|49240426|emb|CAG39077.1| hypothetical protein SAR0049 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49242027|emb|CAG40726.1| transposon Tn554 hypothetical protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|57636510|gb|AAW53298.1| hypothetical protein SERP2512 [Staphylococcus epidermidis RP62A]
gi|57637766|gb|AAW54554.1| Tn554, hypothetical protein [Staphylococcus epidermidis RP62A]
gi|57637905|gb|AAW54693.1| Tn554, hypothetical protein [Staphylococcus epidermidis RP62A]
gi|70568194|dbj|BAE06291.1| hypothetical protein [Staphylococcus aureus]
gi|147739552|gb|ABQ47850.1| Methyltransferase type 12 [Staphylococcus aureus subsp. aureus JH9]
gi|147741204|gb|ABQ49502.1| Methyltransferase type 12 [Staphylococcus aureus subsp. aureus JH9]
gi|149944968|gb|ABR50904.1| Methyltransferase type 12 [Staphylococcus aureus subsp. aureus JH1]
gi|149946654|gb|ABR52590.1| Methyltransferase type 12 [Staphylococcus aureus subsp. aureus JH1]
gi|156722106|dbj|BAF78523.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|238773848|dbj|BAH66411.1| transposon Tn554 hypothetical protein [Staphylococcus aureus]
gi|257275278|gb|EEV06765.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257277660|gb|EEV08344.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257787704|gb|EEV26044.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840883|gb|EEV65336.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257841537|gb|EEV65975.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257853868|gb|EEV76825.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257858412|gb|EEV81290.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257860402|gb|EEV83233.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257863283|gb|EEV86045.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|269939565|emb|CBI47926.1| SAM dependent methyltransferase [Staphylococcus aureus subsp.
aureus TW20]
gi|269941137|emb|CBI49524.1| SAM dependent methyltransferase [Staphylococcus aureus subsp.
aureus TW20]
gi|282167040|gb|ADA81056.1| Hypothetical protein within transposon Tn554 [Staphylococcus
aureus]
gi|282589030|gb|EFB94135.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|285817337|gb|ADC37824.1| Hypothetical protein within transposon Tn554 [Staphylococcus aureus
04-02981]
gi|288551782|gb|ADC53378.1| hypothetical protein [Staphylococcus aureus]
gi|291095196|gb|EFE25461.1| hypothetical protein SCAG_02052 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291595549|gb|EFF26855.1| putative methyltransferase type 12 [Enterococcus faecium E1679]
gi|294967402|gb|EFG43446.1| hypothetical protein SMAG_02895 [Staphylococcus aureus A8819]
gi|295126714|gb|EFG56362.1| hypothetical protein SIAG_02779 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297176352|gb|EFH35627.1| hypothetical protein SLAG_02846 [Staphylococcus aureus A8796]
gi|299758059|dbj|BAJ10034.1| SAM dependent methyltransferase [Staphylococcus aureus]
gi|302750711|gb|ADL64888.1| methylase [Staphylococcus aureus subsp. aureus str. JKD6008]
gi|302751481|gb|ADL65658.1| methylase [Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304342468|gb|EFM08343.1| cyclopropane-fatty-acyl-phospholipid synthase [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312828688|emb|CBX33530.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128356|gb|EFT84368.1| hypothetical protein CGSSa03_12665 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315195558|gb|EFU25945.1| hypothetical protein CGSSa00_07825 [Staphylococcus aureus subsp.
aureus CGS00]
gi|329314327|gb|AEB88740.1| hypothetical protein SAT0131_01754 [Staphylococcus aureus subsp.
aureus T0131]
gi|329727253|gb|EGG63709.1| methyltransferase domain protein [Staphylococcus aureus subsp.
aureus 21172]
Length = 220
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S V + P +D+G G G + V I+ N+ L K
Sbjct: 26 SFFVSNMSPKKGRALDIGCGSGLLVEKLASYYDE-----VVGIDISNQM---LDLAKSKR 77
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR 148
V+ E D I +R
Sbjct: 78 QLTNTVYLNMNAEQLNFNEKFDFIVSR 104
>gi|332372526|gb|AEE61405.1| unknown [Dendroctonus ponderosae]
Length = 356
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 9/81 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVF 128
+ +D+G+G G I S+ + V +E+ +V++ +V
Sbjct: 45 EGKVVLDVGAGTG----ILSVFCAKAGAKTVYAVEASE-TYKLAADIVKENQMENIIQVI 99
Query: 129 ACRIQEA--PQMITTCDVISA 147
RI++ Q+ D+I +
Sbjct: 100 HSRIEDLTSAQIPGKVDIIVS 120
>gi|327394635|dbj|BAK12057.1| methylase HemK family protein YfcB [Pantoea ananatis AJ13355]
Length = 292
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P +D+ +G G I + E V+ ++ + + +++ V
Sbjct: 111 ITDKPRHILDMCTGSGCIAIACAYAFPDAE---VDAVDISHDALAVAEQNIEEHGLIHHV 167
Query: 128 FACRIQEAPQMIT-TCDVIS 146
R ++ D+I
Sbjct: 168 TPIRADLFRELPPVQYDLIV 187
>gi|320041032|gb|EFW22965.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 355
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 15/110 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE--GGLVNLIESKNKKASFLRYVVQK 120
L + L PS +DLGSG I + E ++L + V
Sbjct: 112 LTLIPLPDSPSRILDLGSGPADWAIAIGEEYPDTEVIATDISLFDP---------QSVSI 162
Query: 121 TAARGKVFACRIQEAPQMITTCDVI----SARALADLDTLLEYSFPWLYQ 166
+ D I +RA+++ L + +F L
Sbjct: 163 APPNVYFQIDDAEGKWTFHEPFDFIHVRGLSRAISNWPRLYQQAFDHLKP 212
>gi|307131018|ref|YP_003883034.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Dickeya dadantii 3937]
gi|306528547|gb|ADM98477.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Dickeya dadantii 3937]
Length = 256
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+DLG G G + G V + + + Q+ +
Sbjct: 48 SVLDLGCGAGHVSFTVASL-----VGNVVACDLSPRMLDVVASAAQEKGLTNIRTQQAMA 102
Query: 133 QEAPQMITTCDVISAR 148
+ P + DV+ +R
Sbjct: 103 ESLPFADDSFDVVISR 118
>gi|303319135|ref|XP_003069567.1| methyltransferase, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240109253|gb|EER27422.1| methyltransferase, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 355
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 15/110 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE--GGLVNLIESKNKKASFLRYVVQK 120
L + L PS +DLGSG I + E ++L + V
Sbjct: 112 LTLIPLPDSPSRILDLGSGPADWAIAIGEEYPDTEVIATDISLFDP---------QSVSI 162
Query: 121 TAARGKVFACRIQEAPQMITTCDVI----SARALADLDTLLEYSFPWLYQ 166
+ D I +RA+++ L + +F L
Sbjct: 163 APPNVYFQIDDAEGKWTFHEPFDFIHVRGLSRAISNWPRLYQQAFDHLKP 212
>gi|237711579|ref|ZP_04542060.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|237725968|ref|ZP_04556449.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229435776|gb|EEO45853.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|229454274|gb|EEO59995.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 278
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 12/119 (10%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI-WIDLGSGGGFPGII 88
E FY L + +K + L+ + + + H Y + +D+G+G G +
Sbjct: 76 EEFYGLTFEVNKHV-LIPRPETGELVD-------WIIREHKYGRVKILDIGTGSGCIAVS 127
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++E V + K ++ R + + A DVI +
Sbjct: 128 LT---KNLEEAEVVSWDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVS 183
>gi|229074895|ref|ZP_04207904.1| Methyltransferase type 12 [Bacillus cereus Rock4-18]
gi|228708232|gb|EEL60396.1| Methyltransferase type 12 [Bacillus cereus Rock4-18]
Length = 300
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 12/124 (9%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 9 LETY-----DWNSK--LTYLKNTRDLYYNDDYVSFLVNSVWKINKPVHIVDYGCGYGYLG 61
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+I L +G I+S + R + + + E ++ D+
Sbjct: 62 LILMSLLP--KGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI 118
Query: 147 ARAL 150
A
Sbjct: 119 CHAF 122
>gi|217977726|ref|YP_002361873.1| ubiquinone biosynthesis O-methyltransferase [Methylocella
silvestris BL2]
gi|254789993|sp|B8EI29|UBIG_METSB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|217503102|gb|ACK50511.1| ubiquinone biosynthesis O-methyltransferase [Methylocella
silvestris BL2]
Length = 256
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 34/110 (30%), Gaps = 9/110 (8%)
Query: 42 KINLVSSSTVEDFWIRHV-EDSLRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIE 97
K+N V + + D RH + L + P +D G G G +
Sbjct: 39 KLNPVRVAYLRDLMSRHFRVEGLPRDRYAPRPLEGLRILDAGCGAGLLAEPLARL----- 93
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
G V I+ + R +K+ I+ T D + A
Sbjct: 94 GARVTAIDPAPRNIEVARRHAEKSGLSIDYRMTTIEALSGEAATFDAVLA 143
>gi|124808818|ref|XP_001348416.1| arginine-N-methyltransferase, putative [Plasmodium falciparum 3D7]
gi|23497310|gb|AAN36855.1| arginine-N-methyltransferase, putative [Plasmodium falciparum 3D7]
Length = 401
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 16/113 (14%)
Query: 43 INLVSSST---VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
N + ++ R DS+R + I +D+G G G I S ++
Sbjct: 87 YNYIHIHEDMIKDEVRTRTYYDSIRKNEHLIKDKIVLDVGCGTG----ILSFFAATHGAK 142
Query: 100 LVNLIESKNKKASFLRYVVQK-----TAARGKVFACRIQEAPQMITTCDVISA 147
V IE K+ + ++ + +E + D+I +
Sbjct: 143 HVYSIE----KSDIIYTAIKIRDENNLTDKVTFLKGLAEEIELPVDKVDIIIS 191
>gi|88192213|pdb|2B3T|A Chain A, Molecular Basis For Bacterial Class 1 Release Factor
Methylation By Prmc
Length = 276
Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 39/135 (28%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE---------DFWIRHVE-------- 60
++ E ++L+ L E +FW +
Sbjct: 44 ETQLTDEQCQQLDAL------------LTRRRDGEPIAHLTGVREFWSLPLFVSPATLIP 91
Query: 61 ----DSL---RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ L + +L P +DLG+G G + + + E + ++ S
Sbjct: 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE---IIAVDRMPDAVSL 148
Query: 114 LRYVVQKTAARGKVF 128
+ Q A +
Sbjct: 149 AQRNAQHLAIKNIHI 163
>gi|229820096|ref|YP_002881622.1| methyltransferase [Beutenbergia cavernae DSM 12333]
gi|229566009|gb|ACQ79860.1| methyltransferase [Beutenbergia cavernae DSM 12333]
Length = 187
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFA 129
+ +DL +G G G+ + S V L+ES + A+ R G V A
Sbjct: 44 DARVLDLYAGSGALGLEAA----SRGAQSVLLVESDRRAAAICRRNADTLGLSGVVSVRA 99
Query: 130 CRIQEAPQMITT--CDVISA 147
R+++ + D++
Sbjct: 100 ARVEQLLRRPAPHAFDLVLC 119
>gi|220934410|ref|YP_002513309.1| modification methylase, HemK family [Thioalkalivibrio sp. HL-EbGR7]
gi|219995720|gb|ACL72322.1| modification methylase, HemK family [Thioalkalivibrio sp. HL-EbGR7]
Length = 303
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DL +G G GI + V+L + + R +++ +V A R
Sbjct: 132 ERVLDLCTGSGCIGIACAHAFPDAR---VDLSDISPDALAVARENIRRHGVADRVRAIRS 188
Query: 133 QEAPQMI-TTCDVISA 147
+ D+I +
Sbjct: 189 DLFEGLAGERYDLIVS 204
>gi|149010531|ref|ZP_01831902.1| methyltransferase small domain, putative [Streptococcus pneumoniae
SP19-BS75]
gi|147765012|gb|EDK71941.1| methyltransferase small domain, putative [Streptococcus pneumoniae
SP19-BS75]
Length = 196
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 54 FWIRHVED--SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + + D S + + +D+G G G + L+ G +++ +
Sbjct: 36 VFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINTR 91
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
R +K A+ +F I Q+ D + + RA
Sbjct: 92 ALDLARRNAEKNNAKATIFQSNI--YEQVEGHFDHVISNPPIRA 133
>gi|313159331|gb|EFR58695.1| methyltransferase domain protein [Alistipes sp. HGB5]
Length = 238
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G+G G ++ + + V++ E + + R
Sbjct: 33 PSDRRILDVGTGTGLIALMMAQRAPEARITGVDVEEVSQAREN---AAASPWGGRVVFEQ 89
Query: 130 CRIQEAPQMITTCDVISA 147
C +QE D+I +
Sbjct: 90 CPVQEFA-PDEHFDLIVS 106
>gi|291482707|dbj|BAI83782.1| hypothetical protein BSNT_00561 [Bacillus subtilis subsp. natto
BEST195]
Length = 253
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+D+G+G G + S ++ +++ + Q+ A F
Sbjct: 38 EHRVLDIGAGAGHTALAFS---PYVQEC--IGVDATKEMVEVASSFAQEKGAENVRFQQG 92
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D+I+ R
Sbjct: 93 TAESLPFPDDSFDIITCR 110
>gi|302523658|ref|ZP_07276000.1| methyltransferase [Streptomyces sp. AA4]
gi|302432553|gb|EFL04369.1| methyltransferase [Streptomyces sp. AA4]
Length = 258
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 11/89 (12%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF----LRYVVQK 120
+ L P P+ +D+G G G + G V L++S + S L +
Sbjct: 38 LAHLPPPPATVLDVGGGAGHQSFPLARL-----GYDVVLLDSSDAMLSMAEQRLAAESAE 92
Query: 121 TAARGKVFACRIQEAPQMI--TTCDVISA 147
R ++ R ++A + D +
Sbjct: 93 VRERVRLVRSRGEDAVAAVAGQKFDAVLC 121
>gi|225387403|ref|ZP_03757167.1| hypothetical protein CLOSTASPAR_01156 [Clostridium asparagiforme
DSM 15981]
gi|225046448|gb|EEG56694.1| hypothetical protein CLOSTASPAR_01156 [Clostridium asparagiforme
DSM 15981]
Length = 184
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV--QK 120
L F + +DLG+G G I + + G +E + + A R V +
Sbjct: 52 LSGFAVVKPGETALDLGTGTGI--IPI-LLEAKTPGRHFTGLEIQQESADMARRSVAYNR 108
Query: 121 TAARGKVFACRIQEAPQMI--TTCDVISA 147
+ ++ I+EA ++ + DV+++
Sbjct: 109 LEEKVEIVTGDIKEAGRLFKLASFDVVTS 137
>gi|86142851|ref|ZP_01061290.1| putative protoporphyrinogen oxidase [Leeuwenhoekiella blandensis
MED217]
gi|85830883|gb|EAQ49341.1| putative protoporphyrinogen oxidase [Leeuwenhoekiella blandensis
MED217]
Length = 280
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+G+G G + + L + +++ E K A A +
Sbjct: 108 DFKNTSCTILDIGTGSGAIAVSLAKLLPEAKVTAIDVSEDALKIA---EANASSNAVNVQ 164
Query: 127 VFACRIQEAPQMITTCDVISA 147
I + + + DVI +
Sbjct: 165 FIKQDILDCQALDRSYDVIVS 185
>gi|330823523|ref|YP_004386826.1| protein-(glutamine-N5) methyltransferase [Alicycliphilus
denitrificans K601]
gi|329308895|gb|AEB83310.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Alicycliphilus denitrificans K601]
Length = 281
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 6/85 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P P DLG+G G + V +++ + R ++
Sbjct: 106 LELLAPLPAP-RVADLGTGSGAIALALQHARPDAR---VLAVDASAGALAVARANAERLG 161
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + D I +
Sbjct: 162 LPVRFVQADW--LAGIAGPFDAIVS 184
>gi|294494844|ref|YP_003541337.1| methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
gi|292665843|gb|ADE35692.1| Methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
Length = 217
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-- 129
+ID+GSG +I L I G V ++ K + + ++ V
Sbjct: 46 SGNFIDVGSGPA----SLAIALGEIVDGKVYAMDFSEKMLAIAKRKIESFDLNENVIPIF 101
Query: 130 CRIQEAPQMITTCDVISAR 148
+ + P D+I +R
Sbjct: 102 GDVHDMPFEDCFADLIVSR 120
>gi|229155779|ref|ZP_04283885.1| Methyltransferase type 12 [Bacillus cereus ATCC 4342]
gi|228627765|gb|EEK84486.1| Methyltransferase type 12 [Bacillus cereus ATCC 4342]
Length = 292
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 40/127 (31%), Gaps = 12/127 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
W+ K L D + S V P +D G G G+ G++ L
Sbjct: 5 DWNSK--LTYLKNTRDLYYNDDYISFLVNTVWKINKPVHIVDFGCGYGYLGLVLMPLLP- 61
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+G I+S + R + + + E ++ T D+ A
Sbjct: 62 -KGSKYTGIDSGGTLLAEARELFRLLPYESQFLEGDATEI-KLNDTYDIAICHAF----- 114
Query: 156 LLEYSFP 162
LL S P
Sbjct: 115 LLHMSSP 121
>gi|229192329|ref|ZP_04319293.1| Biotin biosynthesis protein BioC [Bacillus cereus ATCC 10876]
gi|228591109|gb|EEK48964.1| Biotin biosynthesis protein BioC [Bacillus cereus ATCC 10876]
Length = 242
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + K + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTKQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 EQLRLEESYDVIISNA 89
>gi|83721407|ref|YP_442918.1| precorrin-6Y C5,15-methyltransferase [Burkholderia thailandensis
E264]
gi|83655232|gb|ABC39295.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia thailandensis E264]
Length = 506
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S IE+ + + +
Sbjct: 341 LALGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCRTIA---IEAHPARQRIIEHNRDAL 397
Query: 122 AARG-KVFACRIQEAPQMITTCDVI-----SAR 148
++ A R EA + D + +R
Sbjct: 398 GVPALELVAGRAPEALAGLPAPDAVFVGGGVSR 430
>gi|325694368|gb|EGD36280.1| methyltransferase domain protein [Streptococcus sanguinis SK150]
Length = 195
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ +G +++ + + ++
Sbjct: 50 LSVLDF-KAGERVLDVGCGYG----PLGLTLAKAQGVTATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D I + RA
Sbjct: 105 VSAHIFQSNV--YEKVSGIFDHIISNPPIRA 133
>gi|303232598|ref|ZP_07319284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Atopobium vaginae PB189-T1-4]
gi|302481385|gb|EFL44459.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Atopobium vaginae PB189-T1-4]
Length = 546
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 7/104 (6%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ + + + L + P+ + +++G+G G I SI S +E V +S
Sbjct: 118 PRPETEMLVEYALNKLTILHTAPHTPVILEIGTGSG--CIALSIA-SELEHSHVTATDSS 174
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCDVISA 147
S + V A PQ+ D + +
Sbjct: 175 PFACSLAQRNAHALGLDSAVDIIETSYADGVSPQLKGNVDALIS 218
>gi|237748572|ref|ZP_04579052.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13]
gi|229379934|gb|EEO30025.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13]
Length = 279
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 25/87 (28%), Gaps = 7/87 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P+ +D+G+G G I + + V + K + +
Sbjct: 102 ALERLPHGGKIVDMGTGSGAIAIAIASERPDAH---VFATDVSEKALNMATHNALALLKG 158
Query: 125 GKVFACRIQE----APQMITTCDVISA 147
+ + T D+I +
Sbjct: 159 KQTVHFSAGNWFYALKNVNETFDLIVS 185
>gi|20090698|ref|NP_616773.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
gi|19915750|gb|AAM05253.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
Length = 208
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 5/79 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G GF ++ L+ + G V + K + +++T
Sbjct: 46 DQQLKILDMGTGTGF----LALLLAEL-GYEVTGADWAASKLEKAKKKMERTGNFVNFVV 100
Query: 130 CRIQEAPQMITTCDVISAR 148
+ D + +R
Sbjct: 101 EDAENLSFESEQFDAVVSR 119
>gi|332981031|ref|YP_004462472.1| 16S rRNA m(2)G 1207 methyltransferase [Mahella australiensis 50-1
BON]
gi|332698709|gb|AEE95650.1| 16S rRNA m(2)G 1207 methyltransferase [Mahella australiensis 50-1
BON]
Length = 201
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 32/94 (34%), Gaps = 10/94 (10%)
Query: 62 SLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
S + P +D+G G G GI + +E V +++ ++ + ++
Sbjct: 46 SSVLLNALPDRLSGRVLDMGCGYGAIGISIAKAYQDVE---VVMVDINSRAVELAQGNIK 102
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA----RA 149
+ Q+ D+I + RA
Sbjct: 103 LNSINNATVYQSDG-FAQVEGLFDIIVSNPPIRA 135
>gi|327259799|ref|XP_003214723.1| PREDICTED: protein arginine N-methyltransferase 3-like [Anolis
carolinensis]
Length = 515
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G I S+ + V ++ +++ G
Sbjct: 235 PHIFRDKVVLDVGCGTG----ILSMFAAKAGAKKVIGVDQSE-IIYQAMDIIRLNGLEGS 289
Query: 127 V--FACRIQEAPQMITTCDVISA 147
+ R++E + DVI +
Sbjct: 290 ISLVKGRVEEVDLPVEKVDVIIS 312
>gi|293608870|ref|ZP_06691173.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829443|gb|EFF87805.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 183
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ ++ A+ +
Sbjct: 45 QNAQVLDICTGSGALGFEAL----SRGAASVYMIEPDKTQARFLKDNIELLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|237756689|ref|ZP_04585194.1| adhesion protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691154|gb|EEP60257.1| adhesion protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 214
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 21/126 (16%)
Query: 34 FLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS-- 90
W+ K+ NL + H ++F I + + PGI +
Sbjct: 96 EKLAVWNSKMANLKGVK----VYQYH-----KLFDYFLKRYGIISIDAIEPLPGIPPTAK 146
Query: 91 -----IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF---ACRIQEAPQMITTC 142
I + E + L + +YV +KT + V ++EA + +
Sbjct: 147 HLEELILKAKSENVNMILQD-VYHPIKPAKYVSEKTGLKIIVLPHDVGAVEEAKDIFSLF 205
Query: 143 DVISAR 148
D I R
Sbjct: 206 DTIVER 211
>gi|222153024|ref|YP_002562201.1| methyltransferase [Streptococcus uberis 0140J]
gi|222113837|emb|CAR41935.1| putative methyltransferase [Streptococcus uberis 0140J]
Length = 274
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 12/118 (10%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
YF L L +++ L+ E+ L + + +D+G+G G I
Sbjct: 75 AYFRDLVLSVDERV-LIPRPETEELVD------LILAENSTQSLRLLDIGTGSGAIAISL 127
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + V + + + Y ++ + I + + D+I +
Sbjct: 128 KKERPDWD---VFASDISPEALALANYNAEQLGCQITFVESDI--FRSITGSFDIIVS 180
>gi|190574770|ref|YP_001972615.1| putative methyltransferase [Stenotrophomonas maltophilia K279a]
gi|190012692|emb|CAQ46320.1| putative methyltransferase [Stenotrophomonas maltophilia K279a]
Length = 275
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 14/102 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +L + +D+G G G + ++ S +++ + R +
Sbjct: 38 LLVDELPDTVTQLLDVGCGTGASLLASAAARPSAHCTGLDISAPM---LALARQRAEAAG 94
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q+ P D I +R A A+L
Sbjct: 95 LDADFIVADAQQHPLPTAHFDWIQSRLGVMFFEDSQAAFANL 136
>gi|167568205|ref|ZP_02361079.1| methyltransferase [Burkholderia oklahomensis C6786]
Length = 283
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 29/95 (30%), Gaps = 15/95 (15%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G G G + + L V++ E + R ++ A +
Sbjct: 49 DGRHVLDVGCGAGATTLAVARLLGERGRCVGVDVSEPL---IAAARGRAEREGAPARFVR 105
Query: 130 CRIQEAPQMITTCDVISAR-----------ALADL 153
Q + D I +R A A+L
Sbjct: 106 ADAQTHAFAPASFDTIISRFGVMFFENAVDAFANL 140
>gi|83815482|ref|YP_446560.1| arsenite S-adenosylmethyltransferase [Salinibacter ruber DSM 13855]
gi|83756876|gb|ABC44989.1| cyclopropane-fatty-acyl-phospholipid synthase [Salinibacter ruber
DSM 13855]
Length = 270
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 22/78 (28%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIIT-SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+DLGSG G + V+ E KA R F
Sbjct: 74 GERVLDLGSGAGMDAFVARRTVGPDGHVHGVDFAEEMVAKA---RANADTLDYDNVTFEV 130
Query: 130 CRIQEAPQMITTCDVISA 147
I+ P DVI +
Sbjct: 131 GDIEALPVESGAFDVILS 148
>gi|15923040|ref|NP_370574.1| hypothetical protein SAV0050 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15925754|ref|NP_373287.1| hypothetical protein SA0047 [Staphylococcus aureus subsp. aureus
N315]
gi|156978380|ref|YP_001440639.1| hypothetical protein SAHV_0049 [Staphylococcus aureus subsp. aureus
Mu3]
gi|262053221|ref|ZP_06025374.1| hypothetical protein in transposon Tn554 [Staphylococcus aureus
930918-3]
gi|13699966|dbj|BAB41265.1| hypothetical protein in transposon Tn554 [Staphylococcus aureus
subsp. aureus N315]
gi|14245817|dbj|BAB56212.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156720515|dbj|BAF76932.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|259158882|gb|EEW43973.1| hypothetical protein in transposon Tn554 [Staphylococcus aureus
930918-3]
gi|285815775|gb|ADC36262.1| Hypothetical protein within transposon Tn554 [Staphylococcus aureus
04-02981]
Length = 222
Score = 36.2 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S V + P +D+G G G + V I+ N+ L K
Sbjct: 28 SFFVSNMSPKKGRALDIGCGSGLLVEKLASYYDE-----VVGIDISNQM---LDLAKSKR 79
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR 148
V+ E D I +R
Sbjct: 80 QLTNTVYLNMNAEQLNFNEKFDFIVSR 106
>gi|282165451|ref|YP_003357836.1| putative methyltransferase [Methanocella paludicola SANAE]
gi|282157765|dbj|BAI62853.1| putative methyltransferase [Methanocella paludicola SANAE]
Length = 220
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 22/123 (17%)
Query: 43 INLVSSSTVEDF---------------WIRHVEDS--LRVFQLHPYPSIWIDLGSGGGFP 85
+L+ E +R DS +V + P +D+G+G G
Sbjct: 4 HDLIGRIEPEAIPFPLSRLYSWITSSRMVRDYYDSVAAQVLERLP-AGRILDVGTGPG-- 60
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCDV 144
+ +I + + V ++ + K F A + P D+
Sbjct: 61 RLPIAIASKN-KYVHVTGLDLSADMVKIAPALAAKRGVTNVDFRAGSADDLPFGDREFDL 119
Query: 145 ISA 147
+
Sbjct: 120 AIS 122
>gi|221308128|ref|ZP_03589975.1| hypothetical protein Bsubs1_01768 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312452|ref|ZP_03594257.1| hypothetical protein BsubsN3_01781 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317386|ref|ZP_03598680.1| hypothetical protein BsubsJ_01763 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321649|ref|ZP_03602943.1| hypothetical protein BsubsS_01794 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767092|ref|NP_388198.2| methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
gi|229485214|sp|O31474|YCGJ_BACSU RecName: Full=Uncharacterized methyltransferase ycgJ
gi|225184719|emb|CAB12110.2| putative methyltransferase [Bacillus subtilis subsp. subtilis str.
168]
Length = 253
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+D+G+G G + S ++ +++ + Q+ F
Sbjct: 38 EHRVLDIGAGAGHTALAFS---PYVQEC--IGVDATKEMVEVASSFAQEKGVENVRFQQG 92
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D+I+ R
Sbjct: 93 TAESLPFPDDSFDIITCR 110
>gi|171678107|ref|XP_001904003.1| hypothetical protein [Podospora anserina S mat+]
gi|170937123|emb|CAP61780.1| unnamed protein product [Podospora anserina S mat+]
Length = 271
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 5/87 (5%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES--KNKKASFLRYVV 118
D+ + +D+G G G + + V + ES +++F
Sbjct: 25 DAAYLIPHIKSHFDILDIGCGPGTISADLAALVPQGRVTCVEITESALNAARSTF---TS 81
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVI 145
+ V P + DV+
Sbjct: 82 RSLGNGDFVVGDVTSRLPFEDDSFDVV 108
>gi|120406419|ref|YP_956248.1| type 11 methyltransferase [Mycobacterium vanbaalenii PYR-1]
gi|119959237|gb|ABM16242.1| Methyltransferase type 11 [Mycobacterium vanbaalenii PYR-1]
Length = 293
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
IDLGS GF + I+ +L ++ + L V + AC
Sbjct: 141 GGRLIDLGSCFGF--FPLRLARYGIDVLATDLNDNAMR---LLEQVSSRLCRPLTTMACD 195
Query: 132 IQEAPQMITTCDVISA 147
+ P + D ++A
Sbjct: 196 AADVPLPDGSADTVTA 211
>gi|88603266|ref|YP_503444.1| methyltransferase [Methanospirillum hungatei JF-1]
gi|88188728|gb|ABD41725.1| methyltransferase [Methanospirillum hungatei JF-1]
Length = 283
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-V 127
+D+G+G G I + ++ V +E S LR + A +
Sbjct: 63 IDESYRILDVGAGPGTLVIPLASIVAH-----VTAVEPSEGMLSCLRENIALAAITNVDI 117
Query: 128 FACRIQEAP---QMITTCDVISA 147
+ +E + DV+ A
Sbjct: 118 VPKKWEEVDVKQDLNPPYDVVVA 140
>gi|26987470|ref|NP_742895.1| methyl transferase [Pseudomonas putida KT2440]
gi|24982134|gb|AAN66359.1|AE016264_3 methyl transferase [Pseudomonas putida KT2440]
Length = 276
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+L P P+ +DLG+G G + + + + + V ++ + A+ Q+
Sbjct: 100 TALELQPASPAKVLDLGTGTGAIALALASERPAWQ---VTAVDRVEEAAALAERNRQRLG 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
D+I +
Sbjct: 157 LANARVRLSHWFDSLAAERFDLIVS 181
>gi|224810|prf||1202257F ORF
Length = 220
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S V + P +D+G G G + V I+ N+ L K
Sbjct: 26 SFFVSNMSPKKGRALDIGCGSGLLVEKLASYYDE-----VVGIDISNQM---LDLAKSKR 77
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR 148
V+ E D I +R
Sbjct: 78 QLTNTVYLNMNAEQLNFNEKFDFIVSR 104
>gi|255551749|ref|XP_002516920.1| protein arginine n-methyltransferase, putative [Ricinus communis]
gi|223544008|gb|EEF45534.1| protein arginine n-methyltransferase, putative [Ricinus communis]
Length = 541
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ---KTAARGKV 127
+ + +D+G+G G I S+ + V +E+ A + R ++ R V
Sbjct: 190 FGRVVVDVGAGSG----ILSLFAAQAGAKHVYAVEASEM-AEYARKLIAGNPSLGERITV 244
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLL 157
+++E ++ D++ + + TLL
Sbjct: 245 IKGKVEEV-ELPEKADILIS---EPMGTLL 270
>gi|218778577|ref|YP_002429895.1| methyltransferase small [Desulfatibacillum alkenivorans AK-01]
gi|218759961|gb|ACL02427.1| methyltransferase small [Desulfatibacillum alkenivorans AK-01]
Length = 251
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 36/106 (33%), Gaps = 22/106 (20%)
Query: 50 TVEDFWIRHVE----DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
+++ + H DSL +DLG+G G +I + I+ V + +
Sbjct: 34 SLDAVLLPHFVQCGKDSL-----------IVDLGTGAGVIPLILTSLYPDIKVYGVEIQD 82
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT----TCDVISA 147
S A V++ + ++ R I D + +
Sbjct: 83 SL---AGLAERNVRENGLQDRISVIRHDLKKSPIQGLPKNIDYVVS 125
>gi|182683753|ref|YP_001835500.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14]
gi|303254023|ref|ZP_07340141.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae
BS455]
gi|303260303|ref|ZP_07346274.1| hypothetical protein CGSSp9vBS293_03683 [Streptococcus pneumoniae
SP-BS293]
gi|303261509|ref|ZP_07347457.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae
SP14-BS292]
gi|303264177|ref|ZP_07350098.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae
BS397]
gi|303267043|ref|ZP_07352915.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae
BS457]
gi|303269195|ref|ZP_07354972.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae
BS458]
gi|182629087|gb|ACB90035.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14]
gi|302599003|gb|EFL66031.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae
BS455]
gi|302637643|gb|EFL68130.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae
SP14-BS292]
gi|302638627|gb|EFL69091.1| hypothetical protein CGSSpBS293_03683 [Streptococcus pneumoniae
SP-BS293]
gi|302641259|gb|EFL71629.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae
BS458]
gi|302643437|gb|EFL73712.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae
BS457]
gi|302646582|gb|EFL76808.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae
BS397]
Length = 196
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 54 FWIRHVED--SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + + D S + + +D+G G G + L+ G +++ +
Sbjct: 36 VFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINTR 91
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
R +K A+ +F I Q+ D + + RA
Sbjct: 92 ALDLARRNAEKNNAKATIFQSNI--YEQVEGHFDHVISNPPIRA 133
>gi|325121364|gb|ADY80887.1| putative methyltransferase [Acinetobacter calcoaceticus PHEA-2]
Length = 183
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ ++ A+ +
Sbjct: 45 QNAQVLDICTGSGALGFEAL----SRGAASVYMIEPDKTQARFLKDNIELLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|323443087|gb|EGB00707.1| methyltransferase small subunit [Staphylococcus aureus O46]
Length = 202
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 5/82 (6%)
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ HP D+G G G G++ + + +++ ++ + ++ +
Sbjct: 53 LKTHPPGPSKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVKKNQKLNGI 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ + + + D I
Sbjct: 110 DNVIVKESDALSAEEDKSFDFI 131
>gi|319779046|ref|YP_004129959.1| Methylase of polypeptide chain release factor [Taylorella
equigenitalis MCE9]
gi|317109070|gb|ADU91816.1| Methylase of polypeptide chain release factor [Taylorella
equigenitalis MCE9]
Length = 275
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 14/88 (15%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ P + +DLG+G G I + + E V+ I + K ++L A+
Sbjct: 102 LKTTPTGARILDLGTGSGAIAISIANFMPKCEVYAVD-ISKEALKVAYLN-------AKN 153
Query: 126 KVFACRIQE------APQMITTCDVISA 147
+ E P + T D+I +
Sbjct: 154 HGVHIKFFEGSWFDALPYDVGTFDLIVS 181
>gi|317048555|ref|YP_004116203.1| release factor-specific protein-(glutamine-N5) methyltransferase
[Pantoea sp. At-9b]
gi|316950172|gb|ADU69647.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Pantoea sp. At-9b]
Length = 276
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L + +DLG+G G + + + + V + + + Q+
Sbjct: 102 ALAHLPATAATILDLGTGTGAIALALASERPDCQ---VTGCDRVEAAVALAQDNAQRLHI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
F A D+I++
Sbjct: 159 TNVQFFLSHWFAALPSQRFDLIAS 182
>gi|225858641|ref|YP_002740151.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae 70585]
gi|225721043|gb|ACO16897.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae 70585]
Length = 193
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 54 FWIRHVED--SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + + D S + + +D+G G G + L+ G +++ +
Sbjct: 33 VFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINTR 88
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
R +K A+ +F I Q+ D + + RA
Sbjct: 89 ALDLARRNAEKNNAKATIFQSNI--YEQVEGHFDHVISNPPIRA 130
>gi|148986069|ref|ZP_01819090.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71]
gi|148992507|ref|ZP_01822202.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68]
gi|149004045|ref|ZP_01828851.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69]
gi|149021705|ref|ZP_01835736.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72]
gi|147757946|gb|EDK64954.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69]
gi|147921903|gb|EDK73029.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71]
gi|147928824|gb|EDK79837.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68]
gi|147930166|gb|EDK81152.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72]
Length = 196
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 54 FWIRHVED--SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + + D S + + +D+G G G + L+ G +++ +
Sbjct: 36 VFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINTR 91
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
R +K A+ +F I Q+ D + + RA
Sbjct: 92 ALDLARRNAEKNNAKATIFQSNI--YEQVEGHFDHVISNPPIRA 133
>gi|325678116|ref|ZP_08157749.1| methyltransferase domain protein [Ruminococcus albus 8]
gi|324110187|gb|EGC04370.1| methyltransferase domain protein [Ruminococcus albus 8]
Length = 198
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P DLG GGG+ + +++ + KKA + + R K+
Sbjct: 39 IPDSGKVADLGCGGGYNIRRMLGLSEKAKFIGLDISDESVKKAEKVNK--NELGKRVKII 96
Query: 129 ACRIQEAPQMITTCDVISA 147
+ P + D+I+A
Sbjct: 97 KGSAENLPFTDNSIDLITA 115
>gi|220905962|ref|YP_002481273.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
gi|219862573|gb|ACL42912.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
Length = 1012
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D G G G P I + + + + ES+ + A L + R V
Sbjct: 502 IKPGDYLLDAGCGAGGPAIDIAQNFEGVRIEGITISESQAQTAHQLIQQAN-LSDRIHVH 560
Query: 129 ACRIQEAPQMITTCDVI 145
P T DV+
Sbjct: 561 VGDFHHLPFENNTFDVV 577
>gi|183603138|ref|ZP_02964308.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae CDC1087-00]
gi|183571063|gb|EDT91591.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae CDC1087-00]
gi|332202695|gb|EGJ16764.1| methyltransferase small domain protein [Streptococcus pneumoniae
GA41317]
Length = 193
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 54 FWIRHVED--SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + + D S + + +D+G G G + L+ G +++ +
Sbjct: 33 VFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINTR 88
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
R +K A+ +F I Q+ D + + RA
Sbjct: 89 ALDLARRNAEKNNAKATIFQSNI--YEQVEGHFDHVISNPPIRA 130
>gi|169796784|ref|YP_001714577.1| putative methyltransferase [Acinetobacter baumannii AYE]
gi|213156822|ref|YP_002318483.1| putative methyltransferase [Acinetobacter baumannii AB0057]
gi|215484261|ref|YP_002326488.1| hypothetical protein ABBFA_002590 [Acinetobacter baumannii
AB307-0294]
gi|301345605|ref|ZP_07226346.1| hypothetical protein AbauAB0_05158 [Acinetobacter baumannii AB056]
gi|301510032|ref|ZP_07235269.1| hypothetical protein AbauAB05_00602 [Acinetobacter baumannii AB058]
gi|301597664|ref|ZP_07242672.1| hypothetical protein AbauAB059_17653 [Acinetobacter baumannii
AB059]
gi|332853658|ref|ZP_08434888.1| RNA methyltransferase, RsmD family [Acinetobacter baumannii
6013150]
gi|332870837|ref|ZP_08439482.1| RNA methyltransferase, RsmD family [Acinetobacter baumannii
6013113]
gi|169149711|emb|CAM87602.1| putative methyltransferase [Acinetobacter baumannii AYE]
gi|213055982|gb|ACJ40884.1| putative methyltransferase [Acinetobacter baumannii AB0057]
gi|213988713|gb|ACJ59012.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|332728482|gb|EGJ59856.1| RNA methyltransferase, RsmD family [Acinetobacter baumannii
6013150]
gi|332731938|gb|EGJ63216.1| RNA methyltransferase, RsmD family [Acinetobacter baumannii
6013113]
Length = 183
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ +Q A+ +
Sbjct: 45 QNAHVLDICTGSGALGFEAL----SRGAASVYMIEPDKTQARFLKDNIQLLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|242091848|ref|XP_002436414.1| hypothetical protein SORBIDRAFT_10g002100 [Sorghum bicolor]
gi|33321009|gb|AAQ06256.1| putative magnesium-protoporphyrin IX methyltransferase [Sorghum
bicolor]
gi|241914637|gb|EER87781.1| hypothetical protein SORBIDRAFT_10g002100 [Sorghum bicolor]
Length = 330
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 10/100 (10%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYVVQ 119
DS L + D G G G I + + + + ++ + S+ ++ + L
Sbjct: 145 DS----PLELAGTTVCDAGCGTGSLAIPLAAEGADVLASDISAAMVSEAQRQASLAQATA 200
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ ++ +++ + DV+ LD L+ Y
Sbjct: 201 PGSTTFRMPRFEVRDLESLEGRYDVVVC-----LDVLIHY 235
>gi|115358312|ref|YP_775450.1| methyltransferase type 11 [Burkholderia ambifaria AMMD]
gi|115283600|gb|ABI89116.1| Methyltransferase type 11 [Burkholderia ambifaria AMMD]
Length = 282
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 26/89 (29%), Gaps = 13/89 (14%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G G G + +I ++ + + + ++ Q
Sbjct: 53 LDVGCGTG--AVTLAIARRLGAHAHCTGVDISARMIAAAQARAEREGLAASFVPADAQTH 110
Query: 136 PQMITTCDVISA-----------RALADL 153
D++ + RA A+L
Sbjct: 111 AFEPDQFDLVVSRFGVMFFDDPVRAFANL 139
>gi|327451839|gb|EGE98493.1| methyltransferase small domain protein [Propionibacterium acnes
HL083PA2]
Length = 152
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ++DLG G G + G + ++ + + +V A
Sbjct: 65 PSDGTFLDLGCGYGPIACALARACP---GSHIVAVDVNDLAIDLTTRNAKALRVGDRVHA 121
Query: 130 CRIQEAPQMITTCDVISA 147
CR +E D I +
Sbjct: 122 CRPEEV-DPDLRFDEIWS 138
>gi|327451474|gb|EGE98128.1| methyltransferase small domain protein [Propionibacterium acnes
HL087PA3]
Length = 206
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ++DLG G G + G + ++ + + +V A
Sbjct: 65 PSDGTFLDLGCGYGPIACALARACP---GSHIVAVDVNDLAIDLTTRNAKALRVGDRVHA 121
Query: 130 CRIQEAPQMITTCDVISA 147
CR +E D I +
Sbjct: 122 CRPEEV-DPDLRFDEIWS 138
>gi|314969926|gb|EFT14024.1| methyltransferase small domain protein [Propionibacterium acnes
HL037PA1]
Length = 206
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ++DLG G G + G + ++ + + +V A
Sbjct: 65 PSDGTFLDLGCGYGPIACALARACP---GSHIVAVDVNDLAIDLTTRNAKALRVGDRVHA 121
Query: 130 CRIQEAPQMITTCDVISA 147
CR +E D I +
Sbjct: 122 CRPEEV-DPDLRFDEIWS 138
>gi|302787653|ref|XP_002975596.1| hypothetical protein SELMODRAFT_267887 [Selaginella moellendorffii]
gi|302825988|ref|XP_002994552.1| hypothetical protein SELMODRAFT_236988 [Selaginella moellendorffii]
gi|300137439|gb|EFJ04382.1| hypothetical protein SELMODRAFT_236988 [Selaginella moellendorffii]
gi|300156597|gb|EFJ23225.1| hypothetical protein SELMODRAFT_267887 [Selaginella moellendorffii]
Length = 366
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 60 EDSLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
S + H +D+G+G G I +I + V +E+ N A R +
Sbjct: 42 YHSAVFKNKRHFQGKTVLDVGTGSG----ILAIWSAQAGAKKVYAVEATNM-ARHARSLA 96
Query: 119 QKTAAR--GKVFACRIQEAPQMITTCDVISA 147
+V I++ + DVI +
Sbjct: 97 SANGVSHIVEVIEGSIEDV-SIPEKVDVIIS 126
>gi|229047810|ref|ZP_04193390.1| Biotin biosynthesis protein BioC [Bacillus cereus AH676]
gi|228723602|gb|EEL74967.1| Biotin biosynthesis protein BioC [Bacillus cereus AH676]
Length = 242
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 ERLRLEESYDVIISNA 89
>gi|256823407|ref|YP_003147370.1| type 11 methyltransferase [Kangiella koreensis DSM 16069]
gi|256796946|gb|ACV27602.1| Methyltransferase type 11 [Kangiella koreensis DSM 16069]
Length = 354
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 23/76 (30%), Gaps = 7/76 (9%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--VQKTAARGKVFACR 131
+D G G G + + + + +L E +F + + F R
Sbjct: 175 RVLDAGCGKGLALLKLAQEFPNSHFVGYDLCED-----AFAETLEHAKALRLTNIEFQAR 229
Query: 132 IQEAPQMITTCDVISA 147
+ D I++
Sbjct: 230 DLRDFHEPESFDFIAS 245
>gi|261340149|ref|ZP_05968007.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus
ATCC 35316]
gi|288317664|gb|EFC56602.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus
ATCC 35316]
Length = 276
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L + +DLG+G G + + + V+L+ + + VQ+
Sbjct: 102 ALARLPEQSTAILDLGTGTGAIALALASERPDCSVTAVDLM---PDAVALAQRNVQRLGL 158
Query: 124 -RGKVFACRIQEAPQMITTCDVISA 147
V R A + + +I +
Sbjct: 159 CNVTVLQSRWFSALEAR-SFGMIVS 182
>gi|198274619|ref|ZP_03207151.1| hypothetical protein BACPLE_00771 [Bacteroides plebeius DSM 17135]
gi|198272066|gb|EDY96335.1| hypothetical protein BACPLE_00771 [Bacteroides plebeius DSM 17135]
Length = 238
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT--AARGK 126
+D+G+G G ++ + + V ++ R V +T + R +
Sbjct: 35 VDGAGRMLDIGTGSGLIALMLAQRNPD---AFVTAVDIDEAVVEQARENVARTPWSDRME 91
Query: 127 VFACRIQEAPQMI-TTCDVISA 147
V I++AP+ D I +
Sbjct: 92 VERLDIRKAPEEWNGCFDAIVS 113
>gi|182415768|ref|YP_001820834.1| methyltransferase type 12 [Opitutus terrae PB90-1]
gi|177842982|gb|ACB77234.1| Methyltransferase type 12 [Opitutus terrae PB90-1]
Length = 535
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 31/99 (31%), Gaps = 10/99 (10%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVF 128
P + ++LG G + + Q ++S + + + + +V
Sbjct: 48 PANARVLELGCADGSNLLPLAEQFPQ---ASFLGVDSSKVQIAAAQSAITAGGVTNVEVR 104
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
I + P D I A + + P + +K
Sbjct: 105 RQDILDFPADSGKFDYIVAHGV------YSWVPPAVREK 137
>gi|149774747|gb|ABR28419.1| ubiquinone biosynthesis O-methyl-transferase [Delftia
tsuruhatensis]
Length = 240
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 6/84 (7%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
Q+ +D+G GGG I + ++ V I+ K + +T
Sbjct: 47 AQVPLKGRRILDVGCGGG----ILADSMARKGAREVVGIDLATKALRVAQLHALETGTPN 102
Query: 126 KVFAC-RIQEAPQM-ITTCDVISA 147
+ ++ Q + DV++
Sbjct: 103 IHYHEVSVERLAQEQPGSFDVVTC 126
>gi|167035875|ref|YP_001671106.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Pseudomonas
putida GB-1]
gi|166862363|gb|ABZ00771.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Pseudomonas putida GB-1]
Length = 403
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE+ + F+ +
Sbjct: 239 ITLARLAPQPGELLWDVGAGCGSIGIEWMRAHPACRALA---IEADEGRQGFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ + A Q + D I
Sbjct: 296 GVPGLQLVRGKAPAALQGLERPDAI 320
>gi|50843267|ref|YP_056494.1| hypothetical protein PPA1810 [Propionibacterium acnes KPA171202]
gi|289424993|ref|ZP_06426772.1| methyltransferase small domain protein [Propionibacterium acnes
SK187]
gi|50840869|gb|AAT83536.1| conserved protein [Propionibacterium acnes KPA171202]
gi|289154692|gb|EFD03378.1| methyltransferase small domain protein [Propionibacterium acnes
SK187]
gi|313763187|gb|EFS34551.1| methyltransferase small domain protein [Propionibacterium acnes
HL013PA1]
gi|313793309|gb|EFS41367.1| methyltransferase small domain protein [Propionibacterium acnes
HL110PA1]
gi|313801048|gb|EFS42316.1| methyltransferase small domain protein [Propionibacterium acnes
HL110PA2]
gi|313816523|gb|EFS54237.1| methyltransferase small domain protein [Propionibacterium acnes
HL059PA1]
gi|313828417|gb|EFS66131.1| methyltransferase small domain protein [Propionibacterium acnes
HL063PA2]
gi|313838000|gb|EFS75714.1| methyltransferase small domain protein [Propionibacterium acnes
HL086PA1]
gi|314914384|gb|EFS78215.1| methyltransferase small domain protein [Propionibacterium acnes
HL005PA4]
gi|314917707|gb|EFS81538.1| methyltransferase small domain protein [Propionibacterium acnes
HL050PA1]
gi|314919565|gb|EFS83396.1| methyltransferase small domain protein [Propionibacterium acnes
HL050PA3]
gi|314930156|gb|EFS93987.1| methyltransferase small domain protein [Propionibacterium acnes
HL067PA1]
gi|314957173|gb|EFT01277.1| methyltransferase small domain protein [Propionibacterium acnes
HL027PA1]
gi|314957814|gb|EFT01917.1| methyltransferase small domain protein [Propionibacterium acnes
HL002PA1]
gi|314963492|gb|EFT07592.1| methyltransferase small domain protein [Propionibacterium acnes
HL082PA1]
gi|315077221|gb|EFT49286.1| methyltransferase small domain protein [Propionibacterium acnes
HL053PA2]
gi|315097934|gb|EFT69910.1| methyltransferase small domain protein [Propionibacterium acnes
HL059PA2]
gi|315100699|gb|EFT72675.1| methyltransferase small domain protein [Propionibacterium acnes
HL046PA1]
gi|315106087|gb|EFT78063.1| methyltransferase small domain protein [Propionibacterium acnes
HL030PA1]
gi|315109180|gb|EFT81156.1| methyltransferase small domain protein [Propionibacterium acnes
HL030PA2]
gi|327451553|gb|EGE98207.1| methyltransferase small domain protein [Propionibacterium acnes
HL092PA1]
gi|328752054|gb|EGF65670.1| methyltransferase small domain protein [Propionibacterium acnes
HL087PA1]
gi|328755549|gb|EGF69165.1| methyltransferase small domain protein [Propionibacterium acnes
HL025PA2]
Length = 206
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ++DLG G G + G + ++ + + +V A
Sbjct: 65 PSDGTFLDLGCGYGPIACALARACP---GSHIVAVDVNDLAIDLTTRNAKALRVGDRVHA 121
Query: 130 CRIQEAPQMITTCDVISA 147
CR +E D I +
Sbjct: 122 CRPEEV-DPDLRFDEIWS 138
>gi|21357573|ref|NP_650434.1| arginine methyltransferase 3, isoform A [Drosophila melanogaster]
gi|7299975|gb|AAF55147.1| arginine methyltransferase 3, isoform A [Drosophila melanogaster]
gi|15291993|gb|AAK93265.1| LD34544p [Drosophila melanogaster]
gi|220946102|gb|ACL85594.1| Art3-PA [synthetic construct]
gi|220955828|gb|ACL90457.1| Art3-PA [synthetic construct]
Length = 516
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI S V I++ + + + + + ++ R
Sbjct: 244 GKTVLDVGCGTG----ILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKVENVELIKGR 299
Query: 132 IQEAPQMITTCDVISA 147
+++ T D+I +
Sbjct: 300 LEDTDLPETKYDIIIS 315
>gi|20807438|ref|NP_622609.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
tengcongensis MB4]
gi|38605369|sp|Q8RB66|PRMA_THETN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|20515962|gb|AAM24213.1| Ribosomal protein L11 methylase [Thermoanaerobacter tengcongensis
MB4]
Length = 309
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 8/88 (9%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L+ + + +I D+G G G I SI S + V + R V+
Sbjct: 163 CLQFLEDIVKPGAIVFDVGCGSG----ILSIAASKLGASYVYGADVDEMAVKIARENVKL 218
Query: 121 TAARG-KVFACRIQEAPQMITTCDVISA 147
++F + DVI A
Sbjct: 219 NGLENVEIFQSDL--LKNFRGKADVIVA 244
>gi|323351594|ref|ZP_08087248.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
VMC66]
gi|322122080|gb|EFX93806.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
VMC66]
Length = 276
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 29/103 (28%), Gaps = 11/103 (10%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ L + + +D+G+G G + + + +
Sbjct: 89 LIPRPETEELVE------LILSENPESSLSVLDIGTGSGAIALALANSRPDWQ---ITAS 139
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + Q + +A Q D+I +
Sbjct: 140 DLSGDALALAAENAQSSGLNLVFVQSDCLDAIQ--GKFDIIVS 180
>gi|292488089|ref|YP_003530966.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Erwinia amylovora CFBP1430]
gi|292899300|ref|YP_003538669.1| protein methyltransferase [Erwinia amylovora ATCC 49946]
gi|291199148|emb|CBJ46262.1| protein methyltransferase [Erwinia amylovora ATCC 49946]
gi|291553513|emb|CBA20558.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Erwinia amylovora CFBP1430]
Length = 281
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L +DLG+G G + + + + ++ I+ + ++ +
Sbjct: 102 ALAHLPDAACSILDLGTGSGAIALALASERPDCQ---ISGIDRIPAAVALAQHNAARLGL 158
Query: 124 RGKVF 128
F
Sbjct: 159 ANATF 163
>gi|258510757|ref|YP_003184191.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477483|gb|ACV57802.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 189
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 12/93 (12%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V D+L V H ID+G+G G+ + + G V+ ++ + L
Sbjct: 27 VLDALDVQTHHD----VIDIGAGPGYFALPLA----RRTRGKVHAVDLSPEMLQMLSERA 78
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALA 151
++ + + P + D RAL
Sbjct: 79 REAGVSIEAHQASAEHLPLEDASVD----RALM 107
>gi|228902627|ref|ZP_04066778.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis IBL 4222]
gi|228941269|ref|ZP_04103822.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228967154|ref|ZP_04128190.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228974201|ref|ZP_04134771.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980792|ref|ZP_04141097.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis Bt407]
gi|228778961|gb|EEM27223.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis Bt407]
gi|228785541|gb|EEM33550.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792523|gb|EEM40089.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228818428|gb|EEM64500.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228857068|gb|EEN01577.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis IBL 4222]
Length = 242
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 ERLRLEESYDVIISNA 89
>gi|162449935|ref|YP_001612302.1| UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase [Sorangium cellulosum 'So ce 56']
gi|226722976|sp|A9FI55|MURG_SORC5 RecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-
(pentapeptide) pyrophosphoryl-undecaprenol
N-acetylglucosamine transferase; AltName:
Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc
GlcNAc transferase
gi|161160517|emb|CAN91822.1| UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase [Sorangium cellulosum 'So ce 56']
Length = 405
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 87 IITSIQLSSIEGGLVNLIESKNK-KASFLRYVVQKTAARGKV-FACRIQEAPQMITTCDV 144
+ +I G + ++ + + + +R + + G+ I + + + DV
Sbjct: 201 VPRAIARGRERGADLEVVHQTGRDREAAVRALYAELGLAGRARVVPFIDDVAEALAAADV 260
Query: 145 ISARALADLDTLLEYSF 161
+ ARA A TL E
Sbjct: 261 VIARAGAS--TLAELCA 275
>gi|156543461|ref|XP_001601357.1| PREDICTED: similar to serine/threonine-protein kinase vrk [Nasonia
vitripennis]
Length = 807
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFA 129
I +D+G+G G I SI + V IE+ N A + V ++ + +V
Sbjct: 505 DKIVMDVGAGTG----ILSIFCAQAGAKKVYAIEASNL-ALLVSKVAEENNVKDKIEVIQ 559
Query: 130 CRIQEA-PQMITTCDVISA 147
++++ + I D+I +
Sbjct: 560 KKVEDVCLEEIEKVDIIVS 578
>gi|145630697|ref|ZP_01786476.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
R3021]
gi|144983823|gb|EDJ91273.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
R3021]
Length = 330
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G + + + + + + R + + +G+V+A
Sbjct: 191 KGKVLDLGCGAGVIGSTIKKRAPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 248 V--FSDIEGKFDLIIS 261
>gi|72388096|ref|XP_844472.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|62359381|gb|AAX79819.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801005|gb|AAZ10913.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 309
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI-QEAPQMITTCDVISARALADL 153
+N I+ KK +++ V + R +V A + ++ A
Sbjct: 27 DESLTTLNQIDCVVKKLNWMINVTEDLLLRTRVHAEEVYEKRYSAEERY--------AAW 78
Query: 154 DTLLEYSFPWLYQKK 168
+ L Y P++ ++K
Sbjct: 79 ERLFVYVKPFMKKQK 93
>gi|331695672|ref|YP_004331911.1| type 11 methyltransferase [Pseudonocardia dioxanivorans CB1190]
gi|326950361|gb|AEA24058.1| Methyltransferase type 11 [Pseudonocardia dioxanivorans CB1190]
Length = 287
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 14/101 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G G G + + + GG V +++ + + +
Sbjct: 69 GATVLDVGCGFGLESLRLA--RAVTPGGSVTGVDASARFVAEAQRRAAAEGLTVTFVEGD 126
Query: 132 IQEAPQMITTCDVISARA--L--------ADLDTLLEYSFP 162
+ P D RA + A L ++ + P
Sbjct: 127 AADLPFPDDAFD--VTRAERVLVYLPDPDAALAEMVRVTRP 165
>gi|326427717|gb|EGD73287.1| hypothetical protein PTSG_12239 [Salpingoeca sp. ATCC 50818]
Length = 426
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 15/93 (16%)
Query: 61 DSLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D +++ + +D+G G G S+ + V +E+ + F +
Sbjct: 120 DGIQLAADAVIKGGVVMDIGCGSGL----LSLLSARTGARKVIAVEA----SDFYEAAEK 171
Query: 120 KTAARG-----KVFACRIQEAPQMITTCDVISA 147
AA G V R+++ + D I +
Sbjct: 172 VIAANGYSECIDVLHSRVEDVED-VEQVDCIVS 203
>gi|307127610|ref|YP_003879641.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae 670-6B]
gi|301801668|emb|CBW34371.1| putative methyltransferase [Streptococcus pneumoniae INV200]
gi|306484672|gb|ADM91541.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae 670-6B]
gi|332077252|gb|EGI87714.1| methyltransferase small domain protein [Streptococcus pneumoniae
GA17545]
Length = 193
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 54 FWIRHVED--SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + + D S + + +D+G G G + L+ G +++ +
Sbjct: 33 VFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINTR 88
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
R +K A+ +F I Q+ D + + RA
Sbjct: 89 ALDLARRNAEKNNAKATIFQSNI--YEQVEGHFDHVISNPPIRA 130
>gi|196233838|ref|ZP_03132676.1| Methyltransferase type 11 [Chthoniobacter flavus Ellin428]
gi|196222032|gb|EDY16564.1| Methyltransferase type 11 [Chthoniobacter flavus Ellin428]
Length = 308
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L++ +L P +D+G G G ++ G L++ +E ++ + R+ ++
Sbjct: 126 LQIAELQP-GETVLDVGCGTG--SLLIEAARQMGSGSLLHGVEPSSEMLAHARHKAKELI 182
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + + P + DV+
Sbjct: 183 SETQFVQGSADQIPFPGRSFDVVFC 207
>gi|119510216|ref|ZP_01629354.1| hypothetical protein N9414_10538 [Nodularia spumigena CCY9414]
gi|119465166|gb|EAW46065.1| hypothetical protein N9414_10538 [Nodularia spumigena CCY9414]
Length = 440
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC- 130
+ +D G G G+ ++ + G + ++ + R ++ F
Sbjct: 58 GKVILDAGCGSGYKSLMLAEANP---GAKIFGVDISAESVKLARQRLEYYGLDNAEFHVL 114
Query: 131 RIQEAPQMITTCDVI 145
+++ P++ D I
Sbjct: 115 SLEDLPKLNQKFDYI 129
>gi|157827776|ref|YP_001496840.1| putative methyltransferase [Rickettsia bellii OSU 85-389]
gi|157803080|gb|ABV79803.1| Putative methyltransferase [Rickettsia bellii OSU 85-389]
Length = 406
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 24/84 (28%), Gaps = 4/84 (4%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ ++LG G I ++ I+ + V++ + +
Sbjct: 71 ETAKILELGCAAGGNLIPHAVLYPKAH---FVGIDLSKVQIDEANKTVKELGLKNIEFHH 127
Query: 130 CRIQEAPQMITTCDVISARALADL 153
C I + + D I +
Sbjct: 128 CSILDIDDSLNKFDYIICHGVMSW 151
>gi|42601307|gb|AAS21334.1| protein arginine N-methyltransferase 3-like protein [Oikopleura
dioica]
Length = 522
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF-LRYVVQKTAA-- 123
+ +D+G G G I S+ + +V +E +F VV++
Sbjct: 212 PHLFKDKVVVDVGCGTG----ILSMFAAQAGAKIVYALEMSE--IAFDAIDVVRENGLAD 265
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
+ K+ + +E + DV+ +
Sbjct: 266 KVKIIKGKAEEIAATLPKADVVIS 289
>gi|300669612|sp|A2Y8B9|ANM7_ORYSI RecName: Full=Protein arginine N-methyltransferase 7
Length = 720
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLS----SIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S +D+G+G G ++ + L+ GG V+ ES +R V++
Sbjct: 93 DPSSRVLDIGAGTGLLSMMAARALAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMEN 152
Query: 126 K--VFACRIQEAP---QMITTCDVISA 147
+ VF R E + + D++ +
Sbjct: 153 RVKVFHKRSDELKVGDDLDSPADILVS 179
>gi|291513726|emb|CBK62936.1| Predicted O-methyltransferase [Alistipes shahii WAL 8301]
Length = 226
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+ P +D+G+G G ++ + + V++ + R + G
Sbjct: 14 AAVRPQDRRMLDIGTGTGLIALMLAQRAPEAHVTGVDIDD-----VGQARENAAASPWSG 68
Query: 126 KV-FACRIQEAPQMITTCDVISA 147
+V FA + + D+I +
Sbjct: 69 RVAFAQCPVQEFETPEPFDLIVS 91
>gi|229111591|ref|ZP_04241142.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock1-15]
gi|228671973|gb|EEL27266.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock1-15]
Length = 242
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 ERLRLEESYDVIISNA 89
>gi|222634814|gb|EEE64946.1| hypothetical protein OsJ_19828 [Oryza sativa Japonica Group]
Length = 690
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLS----SIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S +D+G+G G ++ + L+ GG V+ ES +R V++
Sbjct: 93 DPSSRVLDIGAGTGLLSMMAARALAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMEN 152
Query: 126 K--VFACRIQEAP---QMITTCDVISA 147
+ VF R E + + D++ +
Sbjct: 153 RVKVFHKRSDELKVRDDLDSPADILVS 179
>gi|220904892|ref|YP_002480204.1| modification methylase, HemK family [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869191|gb|ACL49526.1| modification methylase, HemK family [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 305
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ DLG G G GI +++L +G L++ + R+ A+ +V
Sbjct: 136 FADLGCGSGCIGITLALELPHWQG---VLVDISPEAVQTARHNAASLGAQNRV 185
>gi|218197408|gb|EEC79835.1| hypothetical protein OsI_21299 [Oryza sativa Indica Group]
Length = 690
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLS----SIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S +D+G+G G ++ + L+ GG V+ ES +R V++
Sbjct: 93 DPSSRVLDIGAGTGLLSMMAARALAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMEN 152
Query: 126 K--VFACRIQEAP---QMITTCDVISA 147
+ VF R E + + D++ +
Sbjct: 153 RVKVFHKRSDELKVGDDLDSPADILVS 179
>gi|218245269|ref|YP_002370640.1| FkbM family methyltransferase [Cyanothece sp. PCC 8801]
gi|257058302|ref|YP_003136190.1| methyltransferase FkbM family [Cyanothece sp. PCC 8802]
gi|218165747|gb|ACK64484.1| methyltransferase FkbM family [Cyanothece sp. PCC 8801]
gi|256588468|gb|ACU99354.1| methyltransferase FkbM family [Cyanothece sp. PCC 8802]
Length = 287
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 7/94 (7%)
Query: 53 DFWIR-HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
+FWI H D + Y I +D+G+ G + + + G + E K
Sbjct: 81 NFWIETHCAD--WLCSKIDYGDIILDVGAAFGVITLPM--TQAIGKKGHIYAFEPARKTQ 136
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
FL+ ++ + + + I
Sbjct: 137 KFLQQIIDLNQIKNVTIVQSA--ISEEPGQAEFI 168
>gi|152992387|ref|YP_001358108.1| hypothetical protein SUN_0793 [Sulfurovum sp. NBC37-1]
gi|151424248|dbj|BAF71751.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 459
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 12/103 (11%)
Query: 51 VEDFWIRHVEDSLRV-----FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
++ W V P + +DLG G G ++ + + G V ++
Sbjct: 45 PDEVWEY----CAAVGNPFSVGDIPEGASILDLGCGAGVDLLVAATLVGE--SGRVTGVD 98
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQ-MITTCDVISA 147
K R ++ +A + D++ +
Sbjct: 99 ITPKMVERAREHAKEAGFDNVEVLENSFDALDIEDESIDIVIS 141
>gi|91778852|ref|YP_554060.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia xenovorans LB400]
gi|91691512|gb|ABE34710.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia xenovorans LB400]
Length = 465
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE ++ F+ +
Sbjct: 239 ITLARLAPAPGELLWDVGAGSGSIGIEWMRAHPTCRAIA---IEGHAERQRFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R A + + D +
Sbjct: 296 GVPGLQLVAGRAPAALRGLPVPDAV 320
>gi|115465914|ref|NP_001056556.1| Os06g0105500 [Oryza sativa Japonica Group]
gi|75321768|sp|Q5VS72|ANM7_ORYSJ RecName: Full=Protein arginine N-methyltransferase 7
gi|55295835|dbj|BAD67703.1| putative protein arginine N-methyltransferase 7 [Oryza sativa
Japonica Group]
gi|113594596|dbj|BAF18470.1| Os06g0105500 [Oryza sativa Japonica Group]
Length = 720
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLS----SIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
S +D+G+G G ++ + L+ GG V+ ES +R V++
Sbjct: 93 DPSSRVLDIGAGTGLLSMMAARALAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMEN 152
Query: 126 K--VFACRIQEAP---QMITTCDVISA 147
+ VF R E + + D++ +
Sbjct: 153 RVKVFHKRSDELKVRDDLDSPADILVS 179
>gi|75759243|ref|ZP_00739343.1| Biotin synthesis protein bioC [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899278|ref|YP_002447689.1| putative biotin synthesis protein BioC [Bacillus cereus G9842]
gi|74493249|gb|EAO56365.1| Biotin synthesis protein bioC [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218543015|gb|ACK95409.1| putative biotin synthesis protein BioC [Bacillus cereus G9842]
gi|326941890|gb|AEA17786.1| biotin synthesis protein BioC [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 269
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 47 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 100
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 101 ERLRLEESYDVIISNA 116
>gi|314980981|gb|EFT25075.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
gi|315091640|gb|EFT63616.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
Length = 408
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 290 ILDALVDEPLRPDTTLTKAIESCQGIDGPAIAILG-RLETADIDPLVDLRRDRVAGLALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSNTFTARRFRSSLEQAEEHE--------RAVAELDD-AGWA 382
>gi|307176346|gb|EFN65957.1| N(6)-adenine-specific DNA methyltransferase 1 [Camponotus
floridanus]
Length = 233
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ P+I +++GSG G ++ L I+ + +
Sbjct: 34 LQNILYATKPAICLEIGSGSGIVITALAMALKPFHNAHFIAIDINPDACRATKRTSLINS 93
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
V + + Q+ T DVI
Sbjct: 94 VDVDVLHMNLLDCIQVKNTYDVI 116
>gi|288916190|ref|ZP_06410570.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EUN1f]
gi|288352381|gb|EFC86578.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EUN1f]
Length = 245
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 13/81 (16%)
Query: 32 FYFL-FLKWSKKI--NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ L W++ + NL ++ H+ + +L I++GSG G G+
Sbjct: 101 YAQLPLEAWTQVLSTNLTAT---------HLV-TQGALELLGDSGTVINIGSGAGVVGVP 150
Query: 89 TSIQLSSIEGGLVNLIESKNK 109
++ + GL+ L S +K
Sbjct: 151 LRAHYTAAKTGLIGLTRSLSK 171
>gi|269126804|ref|YP_003300174.1| type 12 methyltransferase [Thermomonospora curvata DSM 43183]
gi|268311762|gb|ACY98136.1| Methyltransferase type 12 [Thermomonospora curvata DSM 43183]
Length = 287
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 13/91 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN----LIESKNKKASFL 114
+ D V + P PS+ ID GSG G + E ++ L+E ++A
Sbjct: 37 IID--AVRERMPDPSLIIDAGSGPGVVSCALAEAFPRAEVVALDNAPALLERAQRRA--- 91
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
R + +I +A + DV+
Sbjct: 92 ----DAAGLRVRTLLGQIPDAFAGLAGADVV 118
>gi|262301003|gb|ACY43094.1| arg methyltransferase [Acanthocyclops vernalis]
Length = 244
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + I +D+G G G I S+ + V I+ R +V++
Sbjct: 12 NSMWHNKHLFKGKIVLDVGCGTG----ILSMFAAKAGAAHVYGIDMSG-IVEQARAIVER 66
Query: 121 TAA--RGKVFACRIQEAPQMITTCDVISA 147
+ + +++E + D+I +
Sbjct: 67 NGLADKVTIIRGKMEEIELPVQKVDIIIS 95
>gi|317054356|ref|YP_004118381.1| methyltransferase type 12 [Pantoea sp. At-9b]
gi|316952351|gb|ADU71825.1| Methyltransferase type 12 [Pantoea sp. At-9b]
Length = 330
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P+ +D+G G G + + + + G +++L K AS + +++ RG+ F
Sbjct: 160 FQRPARLLDMGGGPGLITVALAERFPQLSGVVLDL----PKTASVAQQNIERAGLRGR-F 214
Query: 129 ACRIQEAPQMITTCDVI 145
R Q D+I
Sbjct: 215 CARSQ--LPENEQVDII 229
>gi|182413642|ref|YP_001818708.1| methyltransferase type 11 [Opitutus terrae PB90-1]
gi|177840856|gb|ACB75108.1| Methyltransferase type 11 [Opitutus terrae PB90-1]
Length = 254
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 6/108 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P DLG G G + + L ++ ++ + +
Sbjct: 34 LALGPALPAEPRIADLGCGSGGQTLQLAELLPHSTIDALDSHAPLLERLKA-GALAKSLQ 92
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR-ALADLDT---LLEYSFPWLYQ 166
R +V + P + D+I + A+ +L L + P L
Sbjct: 93 HRIRVHRGDMDAPPFADQSFDLIWSEGAVYNLGVTHALRRW-RPLLRP 139
>gi|160931521|ref|ZP_02078916.1| hypothetical protein CLOLEP_00353 [Clostridium leptum DSM 753]
gi|156869392|gb|EDO62764.1| hypothetical protein CLOLEP_00353 [Clostridium leptum DSM 753]
Length = 267
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 34/97 (35%), Gaps = 10/97 (10%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ + R LR ++ +DLG+G G + ++ G I+ ++
Sbjct: 26 PQELYRR-----LRALEIGCQGQSVLDLGTGTGV--LPRNLA---PYGARFVGIDLSAEQ 75
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + +E T D ++A
Sbjct: 76 IRQAELLSRSSGGNIRYLTGSAEEISFPDTVFDAVTA 112
>gi|24647025|ref|NP_731984.1| arginine methyltransferase 3, isoform B [Drosophila melanogaster]
gi|23171327|gb|AAN13635.1| arginine methyltransferase 3, isoform B [Drosophila melanogaster]
gi|27819739|gb|AAO24922.1| SD23052p [Drosophila melanogaster]
gi|220951464|gb|ACL88275.1| Art3-PB [synthetic construct]
Length = 474
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I SI S V I++ + + + + + ++ R
Sbjct: 202 GKTVLDVGCGTG----ILSIFASKAGAARVVGIDNSDIVYTAMDIIRKNKVENVELIKGR 257
Query: 132 IQEAPQMITTCDVISA 147
+++ T D+I +
Sbjct: 258 LEDTDLPETKYDIIIS 273
>gi|15902787|ref|NP_358337.1| hypothetical protein spr0743 [Streptococcus pneumoniae R6]
gi|116516099|ref|YP_816227.1| methyltransferase small subunit [Streptococcus pneumoniae D39]
gi|15458336|gb|AAK99547.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076675|gb|ABJ54395.1| methyltransferase small domain, putative [Streptococcus pneumoniae
D39]
Length = 196
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 54 FWIRHVED--SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + + D S + + +D+G G G + L+ G +++ +
Sbjct: 36 VFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINTR 91
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
R +K A+ +F I Q+ D + + RA
Sbjct: 92 ALDLARRNAEKNNAKATIFQSNI--YEQVEGHFDHVISNPPIRA 133
>gi|319774960|ref|YP_004137448.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
influenzae F3047]
gi|329123138|ref|ZP_08251708.1| rRNA (guanine-N(2)-)-methyltransferase [Haemophilus aegyptius ATCC
11116]
gi|317449551|emb|CBY85756.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
influenzae F3047]
gi|327471693|gb|EGF17135.1| rRNA (guanine-N(2)-)-methyltransferase [Haemophilus aegyptius ATCC
11116]
Length = 330
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
IDLG G G G + + + + + + + R + + +G+V+A
Sbjct: 191 KGKVIDLGCGAGVIGSMIKKRAPNAQ---ITMTDIHAMALESARKTLSENQLQGEVYASD 247
Query: 132 IQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 248 V--FSNIEGKFDLIIS 261
>gi|269978122|ref|ZP_06185072.1| 16S rRNA m2G1207 methyltransferase [Mobiluncus mulieris 28-1]
gi|269933631|gb|EEZ90215.1| 16S rRNA m2G1207 methyltransferase [Mobiluncus mulieris 28-1]
Length = 272
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR P +++D+G G G ++ + Q V ++ + ++
Sbjct: 119 LRKVPKLPEGGVFVDVGCGWGPLSLVMARQRP---AARVVAVDVNARALDLTAKNARENG 175
Query: 123 ARG-KVFACRIQEAPQMITTCDVISA 147
+V A A + DVI +
Sbjct: 176 LGNLEVLAETAALAQLADGSVDVIWS 201
>gi|227875232|ref|ZP_03993374.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
35243]
gi|227844137|gb|EEJ54304.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
35243]
Length = 282
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR P +++D+G G G ++ + Q V ++ + ++
Sbjct: 129 LRKVPKLPEGGVFVDVGCGWGPLSLVMARQRP---AARVVAVDVNARALDLTAKNARENG 185
Query: 123 ARG-KVFACRIQEAPQMITTCDVISA 147
+V A A + DVI +
Sbjct: 186 LGNLEVLAETAALAQLADGSVDVIWS 211
>gi|169633251|ref|YP_001706987.1| methyl transferase [Acinetobacter baumannii SDF]
gi|169152043|emb|CAP00927.1| methyl transferase [Acinetobacter baumannii]
Length = 273
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + V + + Q F
Sbjct: 104 LPKNANIVDLGTGTGAIALALASERPDW---FVTATDIYAPTLEVAKENAQTHGLHHVKF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
AC + D+I +
Sbjct: 161 ACGVWYEALEPQQFDLIVS 179
>gi|150387943|ref|YP_001317992.1| methyltransferase small [Alkaliphilus metalliredigens QYMF]
gi|149947805|gb|ABR46333.1| methyltransferase small [Alkaliphilus metalliredigens QYMF]
Length = 255
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L F + +DLG+G G I+ + E V IE + + A + V+
Sbjct: 37 LANFVTLKKNARVVDLGTGTGIIPILLA---GKSESSHVTGIEIQEEVAEMAQRSVKLNG 93
Query: 123 ARGK--VFACRIQEAPQ--MITTCDVISA 147
+ + ++EAPQ + + DV+++
Sbjct: 94 LECRIDILPMDLKEAPQVLPVNSFDVVTS 122
>gi|317487049|ref|ZP_07945857.1| methyltransferase domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|316921731|gb|EFV43009.1| methyltransferase domain-containing protein [Bilophila wadsworthia
3_1_6]
Length = 210
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQKTAA-RGKVFA 129
+ +D+G GGG + L G V I+ S A+ LR AA R +V
Sbjct: 47 DARVLDIGCGGG---ANLAQFLKLCPQGSVCGIDFSAESVATSLRKNAGAVAAGRCEVRQ 103
Query: 130 CRIQEAPQMITTCDVISA 147
+ P + D+++A
Sbjct: 104 GDVSRLPYADASFDLVTA 121
>gi|313905333|ref|ZP_07838699.1| ribosomal protein L11 methyltransferase [Eubacterium cellulosolvens
6]
gi|313469803|gb|EFR65139.1| ribosomal protein L11 methyltransferase [Eubacterium cellulosolvens
6]
Length = 317
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 34/124 (27%), Gaps = 20/124 (16%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS------IQLSSIEGG 99
IR ++ + +D+G+G G I+ S I + ++
Sbjct: 153 TGMHETTQLCIR------QLKKYVTPGCEMLDVGTGSGILAIVASKLGAGHILGTDLDPC 206
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
V ++ K + A D+++A + L +
Sbjct: 207 AVPAVDDNKKANDVPMDAFEMLIGNMIDDQETRDRAG--YEKYDIVTA------NILADI 258
Query: 160 SFPW 163
P
Sbjct: 259 LVPM 262
>gi|312135346|ref|YP_004002684.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
owensensis OL]
gi|311775397|gb|ADQ04884.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
owensensis OL]
Length = 306
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 26/84 (30%), Gaps = 6/84 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I +I + V ++ +
Sbjct: 161 AIQKYVKPGMDVLDVGTGSG----ILAIAAKKLLASRVLAVDIDEVAVKVAMENAKLNGV 216
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ + E + D++ A
Sbjct: 217 EIEIKKNNLVEGIE--EKFDIVVA 238
>gi|295402015|ref|ZP_06811976.1| Methyltransferase type 11 [Geobacillus thermoglucosidasius
C56-YS93]
gi|294975906|gb|EFG51523.1| Methyltransferase type 11 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 266
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +L P + +DLG G GF + + E G V ++ + S R K
Sbjct: 72 LAIAELKP-GEVVLDLGCGAGFDCFLAA--RQVGETGRVIGVDMTPEMISKARNNAAKGG 128
Query: 123 ARGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P ++ DVI +
Sbjct: 129 FTNTEFRLGEIEYLPVADSSVDVIIS 154
>gi|260585050|ref|ZP_05852792.1| tellurite resistance protein TehB [Granulicatella elegans ATCC
700633]
gi|260157246|gb|EEW92320.1| tellurite resistance protein TehB [Granulicatella elegans ATCC
700633]
Length = 289
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L P +DLGSG G + + G V ++ L+ + +
Sbjct: 115 LAAQPLIPKG-RVLDLGSGEGRNSLYLASL-----GYDVTSLDWNVPSLQKLQEIATQEG 168
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+V I+ A D+I +
Sbjct: 169 LSLEVEPYDIECADIPGGQYDLIVS 193
>gi|228985703|ref|ZP_04145856.1| hypothetical protein bthur0001_23950 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774098|gb|EEM22511.1| hypothetical protein bthur0001_23950 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 233
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFAC 130
+DLGSG G I + IQ SS V+L++S K L+ ++ K
Sbjct: 53 VLDLGSGVGRNSIPIAQKIQNSSGTVTCVDLLDSALTK---LQTYSKEYGVINNMKTEQA 109
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 110 AIENYYIQRNTYDYIV--AVSSLE 131
>gi|229159094|ref|ZP_04287145.1| hypothetical protein bcere0010_52630 [Bacillus cereus ATCC 4342]
gi|228624361|gb|EEK81137.1| hypothetical protein bcere0010_52630 [Bacillus cereus ATCC 4342]
Length = 195
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFAC 130
+DLGSG G I + IQ SS V+L++S K L+ ++ K
Sbjct: 15 VLDLGSGVGRNSIPIAQKIQNSSGTVTCVDLLDSALTK---LQTYSKEYGVINNMKTEQA 71
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 72 AIENYYIQRNTYDYIV--AVSSLE 93
>gi|218710465|ref|YP_002418086.1| 16S RNA methylase RsmC [Vibrio splendidus LGP32]
gi|218323484|emb|CAV19661.1| 16S RNA methylase RsmC [Vibrio splendidus LGP32]
Length = 340
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 16/122 (13%)
Query: 36 FLKWSKKI--N-----LVSSSTVEDFWIRHVED--SLRVFQLHPY-PSIWIDLGSGGGFP 85
+W K N L ++ + D S + P +D G G G
Sbjct: 156 LQEWFKTYTVNIGEQSLT-VKSLPGVFSHGQFDVGSQLLLDTLPKLKGKVLDFGCGAGVL 214
Query: 86 GIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
G + + + IE + + + + + ++ G VFA + I
Sbjct: 215 GAVMASRHPDIE---LEMCDISAFAVASSQATLEANGLTGNVFASDV--YSDTSKDYQFI 269
Query: 146 SA 147
+
Sbjct: 270 IS 271
>gi|183603300|ref|ZP_02713985.2| methyltransferase small domain superfamily [Streptococcus
pneumoniae SP195]
gi|225856507|ref|YP_002738018.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae P1031]
gi|237650831|ref|ZP_04525083.1| methyltransferase small domain superfamily protein [Streptococcus
pneumoniae CCRI 1974]
gi|183571845|gb|EDT92373.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae SP195]
gi|225724345|gb|ACO20197.1| methyltransferase small domain superfamily [Streptococcus
pneumoniae P1031]
gi|301799838|emb|CBW32410.1| putative methyltransferase [Streptococcus pneumoniae OXC141]
gi|332073168|gb|EGI83647.1| methyltransferase small domain protein [Streptococcus pneumoniae
GA17570]
gi|332076119|gb|EGI86585.1| methyltransferase small domain protein [Streptococcus pneumoniae
GA41301]
Length = 193
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 14/104 (13%)
Query: 54 FWIRHVED--SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ + + D S + + +D+G G G + L+ G +++ +
Sbjct: 33 VFSKKIVDFGSQLLLKCLEVNQGETVLDVGCGYG----PLGLSLAKAYGVQATMVDINTR 88
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
R +K A+ +F I Q+ D + + RA
Sbjct: 89 ALDLARRNAEKNNAKATIFQSNI--YEQVEGHFDHVISNPPIRA 130
>gi|162455075|ref|YP_001617442.1| putative SAM-dependent methyltransferase [Sorangium cellulosum 'So
ce 56']
gi|161165657|emb|CAN96962.1| putative SAM-dependent methyltransferase [Sorangium cellulosum 'So
ce 56']
Length = 272
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 12/109 (11%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
R D +D+G GF S+++ V I+S + R+
Sbjct: 57 RGFAD---AVPADLTGKTVLDIGCNAGF----YSLEMKRRGAARVLGIDSDEDYLAQARF 109
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + A + + + + D++ L L P L
Sbjct: 110 AAEVSGADIEFRNLSVYDVGSLGERFDLVLF-----LGVLYHLRHPLLA 153
>gi|221068958|ref|ZP_03545063.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
gi|220713981|gb|EED69349.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
Length = 291
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 25/149 (16%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-------------FQ 67
+S+E ++ L + L S + DS + +
Sbjct: 60 LSQEQQQRWGQLCALRQQGMPVAYLTGSKEFYGLDLA--VDSRVLDPRPDTETLVDWALE 117
Query: 68 LHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P +DLG+G G + Q S V +++ + R +
Sbjct: 118 LIPEGQPVRVVDLGTGSGAIALALQSQRPSAR---VIAVDASADALAVARSNAARLQLPV 174
Query: 126 KVFACRIQEAPQMITTCDVISA-----RA 149
++ E + D+I + RA
Sbjct: 175 QLAHGSWLEPLDGLEPVDLIVSNPPYIRA 203
>gi|11095227|gb|AAG29793.1|AF235050_16 putative methyltransferase [Streptomyces rishiriensis]
Length = 230
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 8/102 (7%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D L V +DL G G II + + S+ V+L E + A R
Sbjct: 28 FVD-LLVGAGIADGQTVVDLCCGSGELEIILTSRFPSLNLVGVDLSEDMVRIA---RDYA 83
Query: 119 QKTAARGKVFACRIQE---APQMITTCDVISAR-ALADLDTL 156
+ + Q ++ D++ +R A L L
Sbjct: 84 AEQGKELEFRHGDAQSPAGMEDLLGKADLVVSRHAFHRLTRL 125
>gi|297160983|gb|ADI10695.1| 3-demethylubiquinone-9 3-methyltransferase protein [Streptomyces
bingchenggensis BCW-1]
Length = 282
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG--GLVNLIESKNKKASFLRY 116
+ D+L ID+G G G + + + G +I+ +
Sbjct: 30 LADALADALQLDGRGRLIDVGCGPGILALSLAQLFHEVVGLDPDSGMIDEAGR-----EA 84
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ A R + R +E P + T V +
Sbjct: 85 ALAGVADRTRWVRARAEELPAGLGTFTVAT 114
>gi|294675035|ref|YP_003575651.1| modification methylase, HemK family [Prevotella ruminicola 23]
gi|294472149|gb|ADE81538.1| modification methylase, HemK family [Prevotella ruminicola 23]
Length = 291
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G+G G I ++ + + ++ + + R+ Q A K
Sbjct: 123 GCSVLDIGTGSGCIAITLALDIPDSKVTAWDISDE---ALAIARHNAQALGADVKFEKHD 179
Query: 132 IQEAPQMITTCDVISA 147
DVI +
Sbjct: 180 ALALETEADRWDVIVS 195
>gi|282854269|ref|ZP_06263606.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|282583722|gb|EFB89102.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|314923258|gb|EFS87089.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
gi|314967024|gb|EFT11123.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
gi|315093054|gb|EFT65030.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
gi|327327844|gb|EGE69620.1| hypothetical protein HMPREF9341_01955 [Propionibacterium acnes
HL103PA1]
Length = 408
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 290 ILDALVDEPLRPDTTLTKAIESCQGIDGPAIAILG-RLETADIDPLVDLRRDRVAGLALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSNTFTARRFRSSLEQAEEHE--------RAVAELDD-AGWA 382
>gi|257093430|ref|YP_003167071.1| type 11 methyltransferase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257045954|gb|ACV35142.1| Methyltransferase type 11 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 218
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
F+L P P+ +D+ GGG ++ S + + E R T
Sbjct: 44 SAFELIPRPASVLDVPCGGGRVTVLLSQLGYEMSAADYS--EPMR---DITRETAAATGL 98
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
+ VF I+ Q + D I
Sbjct: 99 KVPVFKEDIENLSQADRSFDAIVC 122
>gi|254820506|ref|ZP_05225507.1| methyltransferase-UbiE family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 268
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 61 DSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS + +D+G G PG IT+ + + G V ++ R +
Sbjct: 26 DSAAYLLPHLKPGQSVLDIGCG---PGTITADLAARVAPGPVTAVDQVADVLGVARTEAR 82
Query: 120 KTAARGKVF-ACRIQEAPQMITTCDVI 145
+ F + + T DV+
Sbjct: 83 QRNLSNVSFGTADVHDLDFADGTFDVV 109
>gi|237802418|ref|ZP_04590879.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025275|gb|EGI05331.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 271
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 16/117 (13%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
S + ++ H+ L P+ W+DLG G G+ +S EG +++ E
Sbjct: 32 SVAELQRSVGNHL---LTCLPAGFTPARWLDLGCGTGYFSRALGQAFNSSEGIALDIAEG 88
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
LR+ Q A + P +C +I + L ++ +
Sbjct: 89 M------LRHA-QPLGGAEHFIAGDAEHLPLRDQSCGLI----FSSLAV--QWCADF 132
>gi|134095752|ref|YP_001100827.1| bifunctional 3-demethylubiquinone-9
3-methyltransferase/2-octaprenyl-6-hydroxy phenol
methylase [Herminiimonas arsenicoxydans]
gi|133739655|emb|CAL62706.1| 3-demethylubiquinone-9 3-methyltransferase
(3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
(DHHB methyltransferase) [Herminiimonas arsenicoxydans]
Length = 231
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 10/89 (11%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+SL ID+G GGG + S+ ++L E K A
Sbjct: 39 INSLAPL----AAKTVIDIGCGGGI--LSESMARKGANVTGIDLSEKALKVADLHSL--- 89
Query: 120 KTAARGKVFACRIQE-APQMITTCDVISA 147
++ + + ++ A + D+++
Sbjct: 90 ESGVQVRYELIAAEDMAAREAGKFDIVTC 118
>gi|21228448|ref|NP_634370.1| methyltransferase [Methanosarcina mazei Go1]
gi|20906928|gb|AAM32042.1| methyltransferase [Methanosarcina mazei Go1]
Length = 279
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 10/86 (11%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+L P S +D+GSG G I + + V +E + + ++ +++
Sbjct: 61 LKLSP-DSRVLDIGSGPGTLAIPIA-----RQVAHVTAVEPSDGMMNVMQENIKEYGIEN 114
Query: 126 -KVFACRIQEA---PQMITTCDVISA 147
+ + DV+ A
Sbjct: 115 IDTVHKDWEAVDVRSDLSAPYDVVFA 140
>gi|307297441|ref|ZP_07577247.1| Methyltransferase type 11 [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916701|gb|EFN47083.1| Methyltransferase type 11 [Thermotogales bacterium mesG1.Ag.4.2]
Length = 256
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 27/132 (20%)
Query: 31 YFYFLFLK--WSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ +++ + W+ R +ED +D+G+G G +
Sbjct: 14 RYDYMYEEPYWNLYH---------RIVERLLED------HVKTIGRTLDIGTGTGRWALY 58
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + V ++ + S + + P D + A
Sbjct: 59 LA-----EKAHEVVGVDLSQEMLSVASMKAGLADLKIDFVHSNAERLPFEKECFDYVLA- 112
Query: 149 ALADLDTLLEYS 160
+ LL Y+
Sbjct: 113 ----MGDLLSYA 120
>gi|296504611|ref|YP_003666311.1| biotin synthesis protein BioC [Bacillus thuringiensis BMB171]
gi|296325663|gb|ADH08591.1| biotin synthesis protein BioC [Bacillus thuringiensis BMB171]
Length = 269
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 47 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 100
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 101 ERLRLEESYDVIISNA 116
>gi|261209854|ref|ZP_05924155.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC341]
gi|260841040|gb|EEX67565.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC341]
Length = 310
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ +Q +
Sbjct: 128 WLIEEPTRIMDLCTGSGCIAIACANAFPEAE---VDAIDISADALQVAEQNIQDHGLEQQ 184
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 185 VFPIRSDLFRDLPQ--EQYDLIV 205
>gi|161520977|ref|YP_001584404.1| methyltransferase type 11 [Burkholderia multivorans ATCC 17616]
gi|189352843|ref|YP_001948470.1| SAM-dependent methyltransferase [Burkholderia multivorans ATCC
17616]
gi|160345027|gb|ABX18112.1| Methyltransferase type 11 [Burkholderia multivorans ATCC 17616]
gi|189336865|dbj|BAG45934.1| SAM-dependent methyltransferase [Burkholderia multivorans ATCC
17616]
Length = 284
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 13/89 (14%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G G G + I ++ + +++ R Q
Sbjct: 53 LDVGCGTG--AVTLEIARRLGADAQCTGVDISARMIDAAHERAKRSGLRVHFVCADAQTH 110
Query: 136 PQMITTCDVISA-----------RALADL 153
+ + D+I + RA A+L
Sbjct: 111 AFVPASVDLIVSRFGVMFFDDPVRAFANL 139
>gi|149276555|ref|ZP_01882699.1| hypothetical protein PBAL39_02507 [Pedobacter sp. BAL39]
gi|149233075|gb|EDM38450.1| hypothetical protein PBAL39_02507 [Pedobacter sp. BAL39]
Length = 240
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
Q+ P + +D+G G G + ++ ++ L +L KA V +T+
Sbjct: 48 AALQVTPGATELLDIGCGAGNYTLKMLSKIPNLNCTLNDLSLPMLSKAE--ERVSAQTSG 105
Query: 124 RGKVFACRIQEAPQMITTCDVISARA 149
K ++ D++ A A
Sbjct: 106 TVKTIQMDMRNLELGNEQYDIVLAAA 131
>gi|308805735|ref|XP_003080179.1| protein arginine N-methyltransferase prote (ISS) [Ostreococcus
tauri]
gi|116058639|emb|CAL54346.1| protein arginine N-methyltransferase prote (ISS) [Ostreococcus
tauri]
Length = 392
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D++R+ + +D+G+G G + ++ + V +E+ + R +V
Sbjct: 59 DAVRLNPESFRDKVVLDVGTGSG----VLAMWAAQAGAKKVYAVEATHMAVQA-RKIVAA 113
Query: 121 TAAR--GKVFACRIQEAPQMITTCDVISA 147
+V ++E + DVI +
Sbjct: 114 NGLSDVVEVIQGSMEEVV-LPEKVDVIIS 141
>gi|115466474|ref|NP_001056836.1| Os06g0152400 [Oryza sativa Japonica Group]
gi|113594876|dbj|BAF18750.1| Os06g0152400 [Oryza sativa Japonica Group]
Length = 236
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 36/121 (29%), Gaps = 19/121 (15%)
Query: 32 FYFLFLKWSKKINLVSSSTVEDFWIRHVE---DSLRVFQLHPYPSIWIDLGSGGGFPGII 88
F L + +N S + +H +S + + ID+G G
Sbjct: 88 FKHLLV-----MNPTRVSFIRSILCKHFRRDPNSSKPLE----GLKIIDVGCAAGMLSEP 138
Query: 89 TSIQLSSIEGGLVNLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ G V I++ ++ K + + A + ++ + D +
Sbjct: 139 LARM-----GATVTGIDAADESIKIARVHAASDPLTASIEYLCTTAEDLVKENKQFDAVI 193
Query: 147 A 147
Sbjct: 194 C 194
>gi|313224392|emb|CBY20181.1| unnamed protein product [Oikopleura dioica]
Length = 498
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF-LRYVVQKTAA-- 123
+ +D+G G G I S+ + +V +E +F VV++
Sbjct: 188 PHLFKDKVVVDVGCGTG----ILSMFAAQAGAKIVYALEMSE--IAFDAIDVVRENGLAD 241
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
+ K+ + +E + DV+ +
Sbjct: 242 KVKIIKGKAEEIAATLPKADVVIS 265
>gi|256845244|ref|ZP_05550702.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Fusobacterium sp. 3_1_36A2]
gi|256718803|gb|EEU32358.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Fusobacterium sp. 3_1_36A2]
Length = 189
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 63 LRVFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L SI ID+G+G G GI + + G V IE + K +R V+K
Sbjct: 23 ISIAKLMLKSNSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIRLNVEKF 79
Query: 122 AARG-KVFACRIQEA 135
++ + +A
Sbjct: 80 NLDNFELIHGKAPDA 94
>gi|228994047|ref|ZP_04153948.1| Protein hemK [Bacillus pseudomycoides DSM 12442]
gi|228765695|gb|EEM14348.1| Protein hemK [Bacillus pseudomycoides DSM 12442]
Length = 283
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 24/81 (29%), Gaps = 4/81 (4%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
D+G+G G I ++ + + ++ + + + A
Sbjct: 110 FGKQELHIADIGTGSGAISITLAL---ENQNLHMYTVDIAQESIEVAKENAKALGANVTF 166
Query: 128 FACR-IQEAPQMITTCDVISA 147
+ + + DV+ +
Sbjct: 167 YHGDLLSPFYETGQKLDVVVS 187
>gi|149409570|ref|XP_001505718.1| PREDICTED: similar to UDP-GlcNAc:a-1,3-D-mannoside
b-1,4-N-acetylglucosaminyltransferase IV
[Ornithorhynchus anatinus]
Length = 571
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G + + + + V+ E + +R + K
Sbjct: 291 PHIFKDKVVLDVGCGTGILSMFAAKAGAK-KVIGVDQSEILYQAMDIIR--LNKLEDTIT 347
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ RI+E + DVI +
Sbjct: 348 LVKGRIEEVNLPVEKVDVIIS 368
>gi|117618463|ref|YP_858125.1| SmtA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|262827849|sp|A0KPC4|TRMN6_AERHH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
Full=tRNA m6A37 methyltransferase
gi|117559870|gb|ABK36818.1| SmtA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 236
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 32/106 (30%), Gaps = 19/106 (17%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +D+GSG G ++ + + V L +S + +
Sbjct: 30 LGAWAPVTNARRVLDIGSGSGLIALMLAQRSPADCRIDAVEL-DSNAARQARENAAASPW 88
Query: 122 AARGKVFACRIQEAPQMITTCDVISA---------------RALAD 152
R V IQ T D+I + RALA
Sbjct: 89 HERVTVIESAIQTY--QATPYDLIVSNPPYFVAGQSFRDPARALAR 132
>gi|322370324|ref|ZP_08044883.1| Methyltransferase type 11 [Haladaptatus paucihalophilus DX253]
gi|320550032|gb|EFW91687.1| Methyltransferase type 11 [Haladaptatus paucihalophilus DX253]
Length = 277
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+DLGSG GF + + E G V ++ + R V K A F
Sbjct: 88 GDTVLDLGSGAGFDCFLAA--REVGESGRVIGVDMTPEMVEKARENVVKNDATNVEFRLG 145
Query: 131 RIQEAPQMITTCDVISA 147
I+ P T DVI +
Sbjct: 146 EIEHLPVSDETVDVIIS 162
>gi|313223782|emb|CBY42084.1| unnamed protein product [Oikopleura dioica]
Length = 428
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF-LRYVVQKTAA-- 123
+ +D+G G G I S+ + +V +E +F VV++
Sbjct: 118 PHLFKDKVVVDVGCGTG----ILSMFAAQAGAKIVYALEMSE--IAFDAIDVVRENGLAD 171
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
+ K+ + +E + DV+ +
Sbjct: 172 KVKIIKGKAEEIAATLPKADVVIS 195
>gi|254820547|ref|ZP_05225548.1| methyltransferase type 11 [Mycobacterium intracellulare ATCC 13950]
Length = 248
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P I +D+GSG G + V++ E +A V + +
Sbjct: 89 IPPGGIALDVGSGPGNVTASLARAAGPDGLALGVDISEPMLARA-----VRNEAGPQVGF 143
Query: 128 FACRIQEAPQMITTCDVISARALADL 153
Q P T D + A+ L
Sbjct: 144 IKADAQRLPLRDNTFDAAVSTAVLQL 169
>gi|237730194|ref|ZP_04560675.1| methyltransferase type 11 [Citrobacter sp. 30_2]
gi|226905733|gb|EEH91651.1| methyltransferase type 11 [Citrobacter sp. 30_2]
Length = 256
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR 131
+ +D+G G G + + V + ++ + +
Sbjct: 46 ARVLDMGCGAGHASFVAA-----QHVKQVVAYDLSSQMLEVVAEAAKDRGLENVATRQGY 100
Query: 132 IQEAPQMITTCDVISAR 148
+ P + DV+ +R
Sbjct: 101 AESLPFEDSEFDVVISR 117
>gi|116788929|gb|ABK25054.1| unknown [Picea sitchensis]
Length = 384
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ H +D+G+G G I +I + V +E+ + V+ +
Sbjct: 67 KHHFEGKTVLDVGTGSG----ILAIWCAQAGARKVYAVEATKMSEHARQLVIGNGVSHIV 122
Query: 127 VFACRIQEAPQMITTCDVISA 147
E + DVI +
Sbjct: 123 DVIEGSMEDVMLPEKVDVIIS 143
>gi|319948960|ref|ZP_08023065.1| RNA binding Sun protein [Dietzia cinnamea P4]
gi|319437398|gb|EFV92413.1| RNA binding Sun protein [Dietzia cinnamea P4]
Length = 446
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P W+DL +G G ++ L+ IEGG + +E +A +R +
Sbjct: 249 PDGGRWLDLAAGPGGKAVLLG-ALAEIEGGTLTGVEVSPHRADLVREATRDLPVTVHTAD 307
Query: 130 CRIQEAPQMITTCDVI 145
R P + D +
Sbjct: 308 GR---DPGLEPGFDRV 320
>gi|308512681|gb|ADO32994.1| arginine N-methyltransferase 1 [Biston betularia]
Length = 359
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 72 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIIEANRLSDV 126
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 127 IEIVKGKVEEVELPVEKVDIIIS 149
>gi|302385306|ref|YP_003821128.1| ribosomal protein L11 methyltransferase [Clostridium
saccharolyticum WM1]
gi|302195934|gb|ADL03505.1| ribosomal protein L11 methyltransferase [Clostridium
saccharolyticum WM1]
Length = 318
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 12/92 (13%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA- 122
++ + + +D+G+G G I I + V + + +R ++
Sbjct: 165 QLQKYVTPETTLLDVGTGSG----ILGITALKLGAKEVFGTDLDENAIAAVRENMKANHI 220
Query: 123 -------ARGKVFACRIQEAPQMITTCDVISA 147
+G + + + DV+ A
Sbjct: 221 SGDKFQVLQGNIIDDKAVQEAAGFEKYDVVVA 252
>gi|228907941|ref|ZP_04071792.1| Methyltransferase type 12 [Bacillus thuringiensis IBL 200]
gi|228851700|gb|EEM96503.1| Methyltransferase type 12 [Bacillus thuringiensis IBL 200]
Length = 293
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 42/136 (30%), Gaps = 17/136 (12%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPG 86
LE + W+ K L D + S V P +D G G G+ G
Sbjct: 2 LETY-----DWNNK--LTYLKNTRDLYYNDDYVSFLVDTVWKITKPVHIVDYGCGYGYLG 54
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ L G I+S + R + + + E ++ T D+
Sbjct: 55 LVLMPLLPE--GSKYTSIDSGETLLAEARELFRLLPYDSEFLEGDAIEI-ELNDTYDIAI 111
Query: 147 ARALADLDTLLEYSFP 162
A LL S P
Sbjct: 112 CHAF-----LLHMSSP 122
>gi|229146692|ref|ZP_04275059.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST24]
gi|228636862|gb|EEK93325.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST24]
Length = 242
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 ERLRLEESYDVIISNA 89
>gi|219110547|ref|XP_002177025.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411560|gb|EEC51488.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 445
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQKTAARG 125
+ I +D+G G G I S+ S V ++ S + L +
Sbjct: 158 RHLFQDKIVLDVGCGTG----ILSMFASQAGAKHVYAVDCSTIAHQARLIVAKNGFGDKI 213
Query: 126 KVFACRIQEAPQMITTCDVISA 147
V +I+E + D+I +
Sbjct: 214 TVIQGKIEEIDLPVAQVDIIVS 235
>gi|167384269|ref|XP_001736879.1| protein arginine N-methyltransferase 1 [Entamoeba dispar SAW760]
gi|165900587|gb|EDR26883.1| protein arginine N-methyltransferase 1, putative [Entamoeba dispar
SAW760]
Length = 332
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 13/81 (16%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-----K 126
I +D+G G G I S+ + V IE +A+ ++ G
Sbjct: 52 GKIVLDVGCGLG----ILSLFAARAGAKHVYAIE----RAAIGEKAIEVIKNNGFEDVIT 103
Query: 127 VFACRIQEAPQMITTCDVISA 147
V R+++ + DVI +
Sbjct: 104 VIRGRVEDITLPVERVDVIIS 124
>gi|114565621|ref|YP_752775.1| SAM-dependent methyltransferases [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114336556|gb|ABI67404.1| SAM-dependent methyltransferases [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 251
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L F + +DLG+G G ++ + + S+ + + ES K+A
Sbjct: 41 LAHFPVLDGIKQAVDLGTGNGVIALLLAYRAPSLRVTGIEIQESMIKRARK-NIAFNHLE 99
Query: 123 ARGKVFACRIQEAPQMITT--CDVISA 147
R + I+ + + +++ +
Sbjct: 100 ERIDLIQADIKNIKEYLPPQGAELVVS 126
>gi|237745651|ref|ZP_04576131.1| cyclopropane-fatty-acyl-phospholipid synthase [Oxalobacter
formigenes HOxBLS]
gi|229377002|gb|EEO27093.1| cyclopropane-fatty-acyl-phospholipid synthase [Oxalobacter
formigenes HOxBLS]
Length = 407
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ +RV +D+G G G +I+ + G V I + R
Sbjct: 163 HILTKIRVRP----GDRLLDIGCGWG----ALAIRAAEKYGANVVGITLSKNQYELARQR 214
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
V++ K+ RIQ+ + D I++
Sbjct: 215 VREKGLEDKI-DIRIQDYRDVTGQFDRITS 243
>gi|163733001|ref|ZP_02140445.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter litoralis
Och 149]
gi|161393536|gb|EDQ17861.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter litoralis
Och 149]
Length = 248
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V ++ + R +++ +
Sbjct: 66 RILDIGCGGGLLAEPMARLGAD-----VVGADAAERNIPVARVHAERSGLTIDYRHTTAE 120
Query: 134 EAPQMITTCDVI 145
DV+
Sbjct: 121 ALAAAGEQFDVV 132
>gi|220930733|ref|YP_002507642.1| modification methylase, HemK family [Clostridium cellulolyticum
H10]
gi|220001061|gb|ACL77662.1| modification methylase, HemK family [Clostridium cellulolyticum
H10]
Length = 285
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 8/78 (10%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF--A 129
+D+ +G G + + + + K + + + +V
Sbjct: 116 NKKVLDMCTGSGCIAVSIAYFCPEC---SIVACDVSQKALDVAKANSELNGVQNRVELCC 172
Query: 130 CRIQEAPQMITTCDVISA 147
+ +A + D+I +
Sbjct: 173 GDLFDAIKGGQKFDIIVS 190
>gi|78358540|ref|YP_389989.1| hypothetical protein Dde_3501 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220945|gb|ABB40294.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 275
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P ++D G+G G G+ + L +++G + I+ + A+ + R
Sbjct: 55 PLRFLDAGTGCGVVGLALCLLLDTVQGTGFD-IDPQLADAATHNAAMLGLGNRFSAVQAD 113
Query: 132 IQEAPQM----ITTCDVIS 146
Q+ + D++
Sbjct: 114 AQQVRAHADITPESFDLVV 132
>gi|332158744|ref|YP_004424023.1| putative protein SAM-dependent methyltransferase [Pyrococcus sp.
NA2]
gi|331034207|gb|AEC52019.1| putative protein SAM-dependent methyltransferase [Pyrococcus sp.
NA2]
Length = 219
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
LR+ P +D+GSG G+P ++ ++ S V IES F + + +K
Sbjct: 47 LRLLNEIPKRIRGRVLDVGSGSGYPSLLMAL---SGNATEVVGIESNRHLFEFSKRL-EK 102
Query: 121 TAARGKVFACRIQEAPQMITTCDVIS 146
+ + + D +
Sbjct: 103 LTKNLWFINGDFLDRELGLGSFDTVV 128
>gi|325295169|ref|YP_004281683.1| ribosomal protein L11 methyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065617|gb|ADY73624.1| Ribosomal protein L11 methyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 270
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 16/88 (18%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ++ ++D+G G G I SI + V + + R VV++
Sbjct: 131 IEKILKPNDSFLDVGCGSG----ILSILAKKLGAKKVVGCDIQ-------REVVEEVKLN 179
Query: 125 ---GKVFACRIQE--APQMITTCDVISA 147
+VF + + D++ +
Sbjct: 180 SNLNEVFGIEVIHGSIGDVKDEFDIVVS 207
>gi|295095635|emb|CBK84725.1| [protein release factor]-glutamine N5-methyltransferase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 276
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L P +DLG+G G + + + V ++ + R V++
Sbjct: 102 ALARLPAQPCQILDLGTGTGAIALALASERPDC---TVTAVDVMPDAVALARRNVERLGL 158
Query: 124 RGKVF 128
Sbjct: 159 NNVSV 163
>gi|302908863|ref|XP_003049946.1| hypothetical protein NECHADRAFT_63362 [Nectria haematococca mpVI
77-13-4]
gi|256730883|gb|EEU44233.1| hypothetical protein NECHADRAFT_63362 [Nectria haematococca mpVI
77-13-4]
Length = 341
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+DLG G G I + +L + + + S+ +K ++ V ++ +V
Sbjct: 114 LKDGMRILDLGCGWGSGAIYFAEKLPNSQITAFS--NSRTQK-EYIDSVAKEKGITNLQV 170
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + + D + +
Sbjct: 171 ITGDVVDYEFEPESFDRVVS 190
>gi|296822076|ref|XP_002850226.1| HNRNP arginine N-methyltransferase [Arthroderma otae CBS 113480]
gi|238837780|gb|EEQ27442.1| HNRNP arginine N-methyltransferase [Arthroderma otae CBS 113480]
Length = 544
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 13/103 (12%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
S T D + + D + + +D+G G G I S+ + V ++
Sbjct: 225 SIRT--DAYRDFIYD----NKHLFKDKVVLDVGCGTG----ILSMFCAKAGAKQVIAVD- 273
Query: 107 KNKKASFLRYVVQKTAARGKVFACR--IQEAPQMITTCDVISA 147
+ S R +V + G + R I+E + D+I +
Sbjct: 274 NSDIISKAREIVYENGFDGVITCLRGKIEEVILPVKQVDIIVS 316
>gi|24380023|ref|NP_721978.1| tellurite resistance protein TehB [Streptococcus mutans UA159]
gi|24378013|gb|AAN59284.1|AE014995_1 putative tellurite resistance protein [Streptococcus mutans UA159]
Length = 293
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 16/108 (14%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+KK + T + L S +DLGSG G + ++ G
Sbjct: 105 NKKYGMT--KTHSEV--------LFSAPYLKENSKILDLGSGQGRNSLYLTML-----GH 149
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V +++ + L+ + + K+ I A + T D I +
Sbjct: 150 DVTSVDTNEQSLIHLKNIANEENLPSKINWYDINTA-NLQETYDFILS 196
>gi|15894657|ref|NP_348006.1| precorrin-6B methylase CbiT [Clostridium acetobutylicum ATCC 824]
gi|15024314|gb|AAK79346.1|AE007649_11 Precorrin-6B methylase CbiT [Clostridium acetobutylicum ATCC 824]
gi|325508793|gb|ADZ20429.1| Precorrin-6B methylase CbiT [Clostridium acetobutylicum EA 2018]
Length = 187
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 4/84 (4%)
Query: 63 LRVFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L +D+G+G G I S G V IE + K L +K
Sbjct: 24 LSIAKLEIEEDDTLLDIGAGTGSISIQMSKCTPK---GKVIAIEREEKALKVLEKNKEKF 80
Query: 122 AARGKVFACRIQEAPQMITTCDVI 145
A + + D +
Sbjct: 81 KAHNLYIIKGDASQLNLDESFDGV 104
>gi|56967300|pdb|1XXL|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis At 2.1 A Resolution
gi|56967301|pdb|1XXL|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis At 2.1 A Resolution
gi|99032625|pdb|2GLU|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis
gi|99032626|pdb|2GLU|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis
Length = 239
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+D+G+G G + S ++ +++ + Q+ F
Sbjct: 22 EHRVLDIGAGAGHTALAFS---PYVQEC--IGVDATKEXVEVASSFAQEKGVENVRFQQG 76
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D+I+ R
Sbjct: 77 TAESLPFPDDSFDIITCR 94
>gi|325964444|ref|YP_004242350.1| hypothetical protein Asphe3_31060 [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470531|gb|ADX74216.1| hypothetical protein Asphe3_31060 [Arthrobacter
phenanthrenivorans Sphe3]
Length = 202
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 10/54 (18%)
Query: 53 DFWIRHVED----------SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI 96
+ RHV D SLRV P + +D+G G +PGI I + I
Sbjct: 23 ELMARHVLDELATHGVSGTSLRVADHDVKPGVQVDMGDGDEWPGIREKILAADI 76
>gi|321441961|gb|ADW85395.1| arg methyltransferase [Apha aequalis]
Length = 244
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHIFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIIEANRLSDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|294085493|ref|YP_003552253.1| 3-demethylubiquinone-9 3-methyltransferase protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292665068|gb|ADE40169.1| 3-demethylubiquinone-9 3-methyltransferase protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 247
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + GG+V I+ + R + +
Sbjct: 59 QNLRILDIGCGGGLLAEPMARL-----GGIVTGIDVTSPAIDAARTHAKASGLDITYHCQ 113
Query: 131 RIQEAPQMITTCDVI 145
++ T DVI
Sbjct: 114 SAEDLAASGATFDVI 128
>gi|292493804|ref|YP_003529243.1| methyltransferase type 11 [Nitrosococcus halophilus Nc4]
gi|291582399|gb|ADE16856.1| Methyltransferase type 11 [Nitrosococcus halophilus Nc4]
Length = 228
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 6/93 (6%)
Query: 58 HVEDSLRV-FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
H L+ F +DLG G G + + S V+ ++ +
Sbjct: 30 HFIALLQAAFPPGTIKGHVLDLGCGPGDITLRVAQAWPSC---TVHGVDGAAAMLQHGQQ 86
Query: 117 VVQK--TAARGKVFACRIQEAPQMITTCDVISA 147
+ + R + R+ E DV+ +
Sbjct: 87 ALSQAGLGERVQFLHGRLPEVRLPREKYDVLIS 119
>gi|238015004|gb|ACR38537.1| unknown [Zea mays]
Length = 263
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--KTAARGKVF 128
+ +D+G+G G I S+ + V +E+ + R + R V
Sbjct: 185 EGRVVVDVGAGSG----ILSLFAAQAGARHVYAVEASEMAENAQRLMSGNPSLGQRITVI 240
Query: 129 ACRIQEAPQMITTCDVISA 147
+++E ++ D++ +
Sbjct: 241 RGKVEEV-ELPEKADILIS 258
>gi|37521085|ref|NP_924462.1| hypothetical protein glr1516 [Gloeobacter violaceus PCC 7421]
gi|35212081|dbj|BAC89457.1| glr1516 [Gloeobacter violaceus PCC 7421]
Length = 449
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC- 130
+D G G GF + + ++L E + + R + + F
Sbjct: 63 GKRILDAGCGSGFTSLALAQANPGARIVGIDLSE---RSVAVARERLAFHGFKSAEFHAL 119
Query: 131 RIQEAPQMITTCDVI 145
I+ ++ D+I
Sbjct: 120 PIERVGELGEDFDLI 134
>gi|332995398|gb|AEF05453.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
[Alteromonas sp. SN2]
Length = 269
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 47/162 (29%), Gaps = 29/162 (17%)
Query: 9 ILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKI------NLVSSSTVEDFWIRHVEDS 62
+L + N S++ +++ + + + N S +E H S
Sbjct: 1 MLDKSQKSAPINFSKQEIDRFDALAESWWDPNGNYKTALDFNRARLSVIESQITSHFMKS 60
Query: 63 LRV-----------FQLHPYPSI-------WIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ FQ +P +D+G GGG + ++G V I
Sbjct: 61 EQAQRVVQKVSKTNFQANPMDKTKPFSGLSIVDIGCGGGLISEPLA-----LKGADVTGI 115
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ + +++ + D++
Sbjct: 116 DASAMSIEVAKRHAKQSNVEVNYMHGLSSDLVSQERQFDIVI 157
>gi|332361388|gb|EGJ39192.1| methyltransferase domain protein [Streptococcus sanguinis SK1056]
Length = 195
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ +G +++ + + ++
Sbjct: 50 LSVLDF-EAGERVLDVGCGYG----PLGLTLAKAQGVAATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
++ + ++ D I + RA
Sbjct: 105 ISAEILQSNV--YEKVSGIFDHIISNPPIRA 133
>gi|85714686|ref|ZP_01045673.1| Ribosomal L11 methyltransferase [Nitrobacter sp. Nb-311A]
gi|85698571|gb|EAQ36441.1| Ribosomal L11 methyltransferase [Nitrobacter sp. Nb-311A]
Length = 298
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 8/80 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG+G G + +I + V + + A+ R V + R
Sbjct: 157 PRRILDLGAGTG----VLAIAAAKASRRNVLASDIDPRSAAVARENAASNGVGNLVQSIR 212
Query: 132 I----QEAPQMITTCDVISA 147
+ D++ A
Sbjct: 213 ATGFSAPPFRTRAPFDLVLA 232
>gi|297193706|ref|ZP_06911104.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
gi|297151889|gb|EFH31400.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
Length = 279
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-AC 130
+D+G G G + + +++ V+L ++A R + F
Sbjct: 48 EDAVLDIGCGAGSTTRLAARRVADGHATGVDLSRPMLERA---RESARAEHLGNVTFEHG 104
Query: 131 RIQEAPQMITTCDVISAR 148
Q P DV +R
Sbjct: 105 DAQVHPLAGRGFDVAISR 122
>gi|288560191|ref|YP_003423677.1| SAM-dependent methyltransferase [Methanobrevibacter ruminantium M1]
gi|288542901|gb|ADC46785.1| SAM-dependent methyltransferase [Methanobrevibacter ruminantium M1]
Length = 274
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 7/82 (8%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-K 126
+ +D+G G G I S E + I++ +K L ++ K
Sbjct: 58 IISKEDTVLDVGCGEGSVTIPLS-----KEVKSITAIDATDKMLEILDEKIKSEGIENIK 112
Query: 127 VFACRIQEAP-QMITTCDVISA 147
I + + D++ A
Sbjct: 113 TIKEDINDVNLEKYGKFDIVLA 134
>gi|170732996|ref|YP_001764943.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia cenocepacia MC0-3]
gi|169816238|gb|ACA90821.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Burkholderia cenocepacia MC0-3]
Length = 420
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI S IE+ ++ F+ +
Sbjct: 239 MTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCRAIA---IEAHAERQRFIEHNRDTL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R +A + D I
Sbjct: 296 GVPGLQLLAGRAPDALAGLAAPDAI 320
>gi|158299461|ref|XP_319588.4| AGAP008846-PA [Anopheles gambiae str. PEST]
gi|157013530|gb|EAA14811.4| AGAP008846-PA [Anopheles gambiae str. PEST]
Length = 356
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVF 128
+D+G+G G I SI + V +E+ N A R VV++ + +V
Sbjct: 49 EGKTVLDVGAGTG----ILSIFCAQAGASKVYAVEASNL-ARLARAVVEENQLQAVIEVS 103
Query: 129 ACRIQEAP-QMITTCDVISA 147
C++++ D+I +
Sbjct: 104 ECKVEDFQLPEGERVDIIVS 123
>gi|333010461|gb|EGK29894.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
VA-6]
Length = 343
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGCFDMIIS 267
>gi|321441983|gb|ADW85406.1| arg methyltransferase [Cyclotorna sp. JCR-2011]
Length = 244
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIIEANRLDDI 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|319744973|gb|EFV97302.1| methyltransferase domain protein [Streptococcus agalactiae ATCC
13813]
Length = 196
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 10/86 (11%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+DLG G G I L+ ++G +++ + + + +V
Sbjct: 54 HFEKHKSLLDLGCGYG----PLGISLAKVQGVKATMVDINTRALELAKKNATRNGVVVEV 109
Query: 128 FACRIQEAPQMITTCDVISA----RA 149
F I + T D I + RA
Sbjct: 110 FQSNI--YENISKTFDYIISNPPIRA 133
>gi|156935276|ref|YP_001439192.1| hypothetical protein ESA_03129 [Cronobacter sakazakii ATCC BAA-894]
gi|156533530|gb|ABU78356.1| hypothetical protein ESA_03129 [Cronobacter sakazakii ATCC BAA-894]
Length = 258
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+ +DLG G G + + V + + + ++ ++
Sbjct: 48 ARLLDLGCGAGHASFTAA-----EQVREVVAYDLSSSMLTVVKEAARERGLKHLSTCQGY 102
Query: 132 IQEAPQMITTCDVISAR 148
+ P + D++ +R
Sbjct: 103 AESLPFEAESFDIVISR 119
>gi|332366922|gb|EGJ44663.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
SK1059]
Length = 276
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 11/103 (10%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ L + + +D+G+G G + + + +L
Sbjct: 89 LIPRPETEELVE------LILSENPESSVSVLDIGTGSGAIALALANNRPDWQITASDLS 142
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
E + Q +A Q D+I +
Sbjct: 143 E---DALALATENAQSCGLNLTFVRSDCLDAIQ--EKFDIIVS 180
>gi|257470514|ref|ZP_05634604.1| precorrin-8W decarboxylase [Fusobacterium ulcerans ATCC 49185]
gi|317064721|ref|ZP_07929206.1| precorrin-8W decarboxylase [Fusobacterium ulcerans ATCC 49185]
gi|313690397|gb|EFS27232.1| precorrin-8W decarboxylase [Fusobacterium ulcerans ATCC 49185]
Length = 192
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ +L S+ ID+G+G G GI + L G V IE + K +R ++K
Sbjct: 24 SIAKLRL-KEDSVLIDVGAGTGTIGIEAATYLKD---GKVIGIEKEEKGLEVIRENIKKF 79
Query: 122 AARG-KVFACRI-QEAPQ 137
+ R Q+ P+
Sbjct: 80 NLENYYLIHGRAPQDIPE 97
>gi|229076543|ref|ZP_04209503.1| Protein hemK [Bacillus cereus Rock4-18]
gi|228706576|gb|EEL58789.1| Protein hemK [Bacillus cereus Rock4-18]
Length = 283
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
D+G+G G I +++ ++ V ++ + + + A
Sbjct: 110 FGNEKLHVADIGTGSGAISITLALENKNLH---VYTVDIARESIEVAKENAKSLGAEVTF 166
Query: 128 FACR-IQEAPQMITTCDVISA 147
+ + ++ DV+ +
Sbjct: 167 YHGDLLSPFYKIDQKLDVVVS 187
>gi|158522400|ref|YP_001530270.1| methyltransferase type 11 [Desulfococcus oleovorans Hxd3]
gi|158511226|gb|ABW68193.1| Methyltransferase type 11 [Desulfococcus oleovorans Hxd3]
Length = 220
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG+G G I + G V ++ + L+ + ++ C
Sbjct: 44 GKTALDLGAGEGRYSIHLA-----RRGCAVTAVDFSASGLNKLQGIAEQERLPVTTVLCD 98
Query: 132 IQEAPQMITTCDVISA 147
++ T DV+ A
Sbjct: 99 LETYAFPENTFDVVVA 114
>gi|91204899|ref|YP_537254.1| putative methyltransferase [Rickettsia bellii RML369-C]
gi|91068443|gb|ABE04165.1| Putative methyltransferase [Rickettsia bellii RML369-C]
Length = 553
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 24/84 (28%), Gaps = 4/84 (4%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ ++LG G I ++ I+ + V++ + +
Sbjct: 71 ETAKILELGCAAGGNLIPHAVLYPKAH---FVGIDLSKVQIDEANKTVKELGLKNIEFHH 127
Query: 130 CRIQEAPQMITTCDVISARALADL 153
C I + + D I +
Sbjct: 128 CSILDIDDSLNKFDYIICHGVMSW 151
>gi|37521087|ref|NP_924464.1| hypothetical protein glr1518 [Gloeobacter violaceus PCC 7421]
gi|35212083|dbj|BAC89459.1| glr1518 [Gloeobacter violaceus PCC 7421]
Length = 440
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC- 130
+D G G GF + + ++L E + + R + + F
Sbjct: 57 GKRILDAGCGSGFTSLALAQANPGARIVGIDLSE---RSVAVARERLAFHGFKSAEFHAL 113
Query: 131 RIQEAPQMITTCDVI 145
I+ ++ D+I
Sbjct: 114 PIERVGELGEDFDLI 128
>gi|327332267|gb|EGE74003.1| putative methyltransferase small domain protein [Propionibacterium
acnes HL097PA1]
Length = 206
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ++DLG G G + G + ++ + + +V A
Sbjct: 65 PSNGTFLDLGCGYGPIACALARACP---GSHIVAVDVNDLAIDLTTRNAKVLRVGDRVHA 121
Query: 130 CRIQEAPQMITTCDVISA 147
CR +E D I +
Sbjct: 122 CRPEEV-DPDLRFDEIWS 138
>gi|315937136|gb|ADU56143.1| hypothetical protein CA915-22 [uncultured organism CA915]
Length = 273
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 11/76 (14%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
++D+G G G G V +E + A+F + +V R
Sbjct: 46 GKRFVDVGCGTGISSRPFQAA-----GCTVLGVEPDARMAAF----ARGRGLDVEV--AR 94
Query: 132 IQEAPQMITTCDVISA 147
++ D + +
Sbjct: 95 FEDWDPAGRVFDAVVS 110
>gi|302771493|ref|XP_002969165.1| hypothetical protein SELMODRAFT_410045 [Selaginella moellendorffii]
gi|300163670|gb|EFJ30281.1| hypothetical protein SELMODRAFT_410045 [Selaginella moellendorffii]
Length = 526
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKNKKASFLRYVVQKTAARGKVF 128
+ +D+G+G G I S+ + V +E S A L + R V
Sbjct: 188 QGRVVVDVGAGSG----ILSLFAAQAGAKHVYAVEASSMADYARKLIAGNHVLSQRITVI 243
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
++++ ++ DV+ + + TLL
Sbjct: 244 HGKVEDV-ELPEKADVLIS---EPMGTLL 268
>gi|302784248|ref|XP_002973896.1| hypothetical protein SELMODRAFT_149478 [Selaginella moellendorffii]
gi|300158228|gb|EFJ24851.1| hypothetical protein SELMODRAFT_149478 [Selaginella moellendorffii]
Length = 542
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE--SKNKKASFLRYVVQKTAARGKVF 128
+ +D+G+G G I S+ + V +E S A L + R V
Sbjct: 207 QGRVVVDVGAGSG----ILSLFAAQAGAKHVYAVEASSMADYARKLIAGNHVLSQRITVI 262
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
++++ ++ DV+ + + TLL
Sbjct: 263 HGKVEDV-ELPEKADVLIS---EPMGTLL 287
>gi|251793926|ref|YP_003008658.1| methyltransferase domain-containing protein [Aggregatibacter
aphrophilus NJ8700]
gi|247535325|gb|ACS98571.1| methyltransferase domain family [Aggregatibacter aphrophilus
NJ8700]
Length = 266
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 21/130 (16%)
Query: 38 KWSKKI-----NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQ 92
KW KK NLV ++ + + + ++++V +D+G G G I +
Sbjct: 28 KWDKKAVKMAENLVGKASR---YNQQLLETMQVQP----DETVLDIGCGPGTFAIPLA-- 78
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI-QEAPQMITTCDVIS-ARA- 149
+G V ++ L QK R E + DVI +R+
Sbjct: 79 ---QQGSQVYALDYSTGMLDVLAEYKQKLQLANLNLIRRSWAEDWNDVPQVDVILASRST 135
Query: 150 -LADLDTLLE 158
+ DLD +++
Sbjct: 136 LVDDLDDMID 145
>gi|183222483|ref|YP_001840479.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
gi|189912521|ref|YP_001964076.1| methylase/methyltransferase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777197|gb|ABZ95498.1| Methylase/methyltransferase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780905|gb|ABZ99203.1| Putative S-adenosyl-L-methionine-dependent methyltransferase
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 199
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 5/66 (7%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI---EGGLVNL-- 103
+ RH+ L L +D G G G GI + + +G V L
Sbjct: 15 TEERIQLARHILAKLEPVLLEISNKTLLDFGCGTGLLGIPLTSLYKEVILSDGSKVMLDV 74
Query: 104 IESKNK 109
++SK K
Sbjct: 75 VDSKIK 80
>gi|330417879|ref|NP_001193394.1| glutathione S-transferase C-terminal domain-containing protein
[Nasonia vitripennis]
Length = 563
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 60 EDSLR--VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+SL V +L +D SGGG GI+ + L + L+E+K + +
Sbjct: 355 LESLCKPVLKLAKDGDTIVDFCSGGGHLGILLAYLLPKCN---IILLENKAESMKKAKDR 411
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
V K + +F D+ +
Sbjct: 412 VVKLSLNNVIFYQ--SNLDYFKGHFDIGTC 439
>gi|324326563|gb|ADY21823.1| hypothetical protein YBT020_12925 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 233
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFAC 130
+DLGSG G I + IQ +S V+L++S K L+ ++ K+
Sbjct: 53 VLDLGSGVGRNSIPIAQKIQNASGTVTCVDLLDSALTK---LQTYSKEYGVINNIKIEQA 109
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 110 AIENYYIQPNTYDYIV--AVSSLE 131
>gi|319740479|gb|ADV60533.1| arg methyltransferase [Quentalia chromana]
Length = 244
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V IE N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAIECSN-IVDYARKIVEANRLDDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|300814917|ref|ZP_07095148.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511007|gb|EFK38276.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 246
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--F 128
+ +D+G G GF ++ + G V I++ + ++ K+
Sbjct: 42 QKNKILDVGCGTGFISLLLAQI-----GCDVIAIDNNVAMLKEAEKISEELGFSNKITFM 96
Query: 129 ACRIQEAPQMITTCDVISAR-AL 150
+ T + + +R A
Sbjct: 97 LKDAELVDFPDNTFNAVVSRHAF 119
>gi|154253297|ref|YP_001414121.1| type 11 methyltransferase [Parvibaculum lavamentivorans DS-1]
gi|154157247|gb|ABS64464.1| Methyltransferase type 11 [Parvibaculum lavamentivorans DS-1]
Length = 279
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 2/85 (2%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ Q S +D+G+G G + VN+ E++NK L
Sbjct: 58 ASMLQGIGETSKVLDIGAGYGGAARHLAKTR-GCHVTCVNISETQNKLNRELNRKAG-LE 115
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
R V + P + DV+ +
Sbjct: 116 ERVDVVHGDFENIPADDESMDVVWS 140
>gi|24115600|ref|NP_710110.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 2a
str. 301]
gi|30065609|ref|NP_839780.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 2a
str. 2457T]
gi|81837976|sp|Q820Z6|RSMC_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|24054937|gb|AAN45817.1| putative enzyme [Shigella flexneri 2a str. 301]
gi|30043873|gb|AAP19592.1| putative enzyme [Shigella flexneri 2a str. 2457T]
gi|281603708|gb|ADA76692.1| RRNA (Guanine-N(2)-)-methyltransferase [Shigella flexneri 2002017]
gi|313646274|gb|EFS10736.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
2a str. 2457T]
gi|332748881|gb|EGJ79305.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
4343-70]
gi|332749133|gb|EGJ79556.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
K-671]
gi|332749660|gb|EGJ80076.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
2747-71]
gi|332768755|gb|EGJ98934.1| 16S rRNA methyltransferase [Shigella flexneri 2930-71]
gi|333009463|gb|EGK28919.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
K-218]
gi|333022399|gb|EGK41637.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
K-304]
Length = 343
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + I
Sbjct: 167 LT-VKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGCFDMIIS 267
>gi|332083363|gb|EGI88594.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii
5216-82]
Length = 343
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDIGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G++FA + ++ D+I +
Sbjct: 244 GVEGEIFASNV--FSEVKGRFDMIIS 267
>gi|313680143|ref|YP_004057882.1| hypothetical protein Ocepr_1252 [Oceanithermus profundus DSM 14977]
gi|313152858|gb|ADR36709.1| Conserved hypothetical protein CHP00095 [Oceanithermus profundus
DSM 14977]
Length = 174
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI-- 132
++DL +G G G+ + EG L+ES LR K +V
Sbjct: 47 FLDLYAGSGAVGLEAA-----SEGFEAVLVESDPGAVKTLRENAHKLGLSVRVVHESADR 101
Query: 133 --QEAPQMITTCDVI 145
+ + + DV+
Sbjct: 102 FLERSARTGERFDVV 116
>gi|326776958|ref|ZP_08236223.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
gi|326657291|gb|EGE42137.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
Length = 361
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G G + + + V++ S + R ++ F + +
Sbjct: 183 VLDVGTGQGHAVNLLARAFPAGRFTGVDMSRSG---IAAARDEAERLGLPNARF--EVAD 237
Query: 135 APQMITTCDVISA 147
A + D+++A
Sbjct: 238 AAGVTGGYDLVTA 250
>gi|224372200|ref|YP_002606572.1| ribosomal protein L11 methyltransferase [Nautilia profundicola AmH]
gi|223589094|gb|ACM92830.1| ribosomal protein L11 methyltransferase [Nautilia profundicola AmH]
Length = 274
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 9/85 (10%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF-LRYVVQKTA 122
+ + +D+G G G GI+ S + ++ + I + K +F L +
Sbjct: 137 AIKKYVNENDTLLDVGCGSGILGIVASKLGAKVDACDTDSIAVDSAKENFELNNATYENI 196
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G DV+ A
Sbjct: 197 WHGSANNTE--------KKYDVVVA 213
>gi|197249709|ref|YP_002146254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197213412|gb|ACH50809.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
Length = 277
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ QL +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALAQLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|114567201|ref|YP_754355.1| methyltransferase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338136|gb|ABI68984.1| methyltransferase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 205
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
I +D+G+G G+ G + I + I+ + + F R V + +
Sbjct: 28 DYALDSGICLDIGTGNGYVGSEIA----KITRMDIYYIDIEAEALDFARRSVAEADIDNE 83
Query: 127 VFACRI---QEAPQMITTCDVISAR 148
VF Q P D I +R
Sbjct: 84 VFFVEADICQGLPLADNFADFIISR 108
>gi|228954401|ref|ZP_04116427.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228805333|gb|EEM51926.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 242
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 EQLRLEESYDVIISNA 89
>gi|30689611|ref|NP_195038.2| coclaurine N-methyltransferase, putative [Arabidopsis thaliana]
gi|29028868|gb|AAO64813.1| At4g33120 [Arabidopsis thaliana]
gi|110742942|dbj|BAE99366.1| hypothetical protein [Arabidopsis thaliana]
gi|332660776|gb|AEE86176.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 355
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + I + L + SK +KA F+ +K +
Sbjct: 127 VEDGQSVLDIGCGWG--SLTLYIARKYSKCKLTGICNSKTQKA-FIDEKCRKLGLQNVEI 183
Query: 129 ACRIQEAPQMITTCDVISA 147
+ T D I +
Sbjct: 184 IAADISTFEHEGTYDRIFS 202
>gi|238787950|ref|ZP_04631746.1| Methyltransferase type 11 [Yersinia frederiksenii ATCC 33641]
gi|238723898|gb|EEQ15542.1| Methyltransferase type 11 [Yersinia frederiksenii ATCC 33641]
Length = 256
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +DLG G G + + S V + + + +V
Sbjct: 45 GDARLLDLGCGAGHASFTAAAVVKS-----VVSYDLSAQMLQVVSQAASDKKLTNIEVKQ 99
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D++ +R
Sbjct: 100 GIAESLPFDDQSFDIVISR 118
>gi|222823924|ref|YP_002575498.1| methylase [Campylobacter lari RM2100]
gi|222539146|gb|ACM64247.1| conserved hypothetical protein, possible methylase [Campylobacter
lari RM2100]
Length = 230
Score = 35.9 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Query: 61 DSLRVFQL---HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL +F + +D+G G G G++ + + + V L++ + +
Sbjct: 16 DSLLLFDFLSKYNLKGNILDIGCGCGILGLLIKQKFPNSK---VYLLDIQEQNIKLSYKN 72
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ + I D + +
Sbjct: 73 AKENKLEIQGICEDFLNYKSDI-KFDFLIS 101
>gi|323127350|gb|ADX24647.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
Length = 210
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 10/86 (11%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+DLG G G I L+ ++ L++ N+ + ++ +
Sbjct: 65 HFNKGEWVLDLGCGYG----PLGISLAKVQEVEATLVDINNRAIDLAQKNARQNQVDVTI 120
Query: 128 FACRIQEAPQMITTCDVISA----RA 149
F I + + + I + RA
Sbjct: 121 FQSNI--YENVRGSFNHIISNPPIRA 144
>gi|321441987|gb|ADW85408.1| arg methyltransferase [Euclea delphinii]
Length = 244
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V IE N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGATKVIAIECSN-IVDYARKIVEANRLDDI 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|311070219|ref|YP_003975142.1| glutamine methylase [Bacillus atrophaeus 1942]
gi|310870736|gb|ADP34211.1| glutamine methylase [Bacillus atrophaeus 1942]
Length = 288
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 38/104 (36%), Gaps = 5/104 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ + H+ + + P ID+G+G G + ++ + V+ I
Sbjct: 90 LIPRPETEEVVL-HLLEKQKRVFPEGEPLRVIDVGTGSGAIAVTLAL---ENKHFSVSAI 145
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + ++ A+ F ++ + D+I +
Sbjct: 146 DISKEALQIAAENAERLGAKVDFFEGDLLEPFIKEGKKADIIVS 189
>gi|255532070|ref|YP_003092442.1| modification methylase, HemK family [Pedobacter heparinus DSM 2366]
gi|255345054|gb|ACU04380.1| modification methylase, HemK family [Pedobacter heparinus DSM 2366]
Length = 288
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 12/93 (12%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V +S + + ID+G+G G I E +++ E+ +
Sbjct: 105 VLESTALEAVTGAALRLIDIGTGSGCIAISLKKNFPEAEVSALDVSEAAI-------DIA 157
Query: 119 QKTAARGKV----FACRIQEAPQMITTCDVISA 147
A +V I+E DV+ +
Sbjct: 158 GSNALLNEVDIKFIQADIREF-TTKQKFDVVVS 189
>gi|57338475|gb|AAW49309.1| putative methyltransferase [Streptomyces turgidiscabies Car8]
Length = 280
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 19/112 (16%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V D+L P + +D GSG G + + G V+ + F + +
Sbjct: 76 VLDALGEV---PSTARVMDAGSGRGGTSFVIA----DKFGCRVDGVNYCAHHVDFTQNLA 128
Query: 119 QKTAARGKV--FACRIQEAPQMITTCDVISA----------RALADLDTLLE 158
++ +V + + P T D I + +A A+ LL
Sbjct: 129 RERGVANRVQFHFTNMMQTPFEDGTFDFIVSNETTMCVDIHKAFAEFSRLLR 180
>gi|296169459|ref|ZP_06851079.1| UbiE/COQ5 family methyltransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895725|gb|EFG75420.1| UbiE/COQ5 family methyltransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 270
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 61 DSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS + +D+G G PG IT+ + + G V ++ R VQ
Sbjct: 28 DSAAYLLPRLKPGLSVLDVGCG---PGTITADLAARVAPGPVTAVDQSADVLGAARAEVQ 84
Query: 120 KTAARGKVFA-CRIQEAPQMITTCDVI 145
FA + T DV+
Sbjct: 85 HRGLSNVTFATADVHRLDFADGTFDVV 111
>gi|228960384|ref|ZP_04122036.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229129397|ref|ZP_04258368.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-Cer4]
gi|229152318|ref|ZP_04280511.1| Biotin biosynthesis protein BioC [Bacillus cereus m1550]
gi|228631280|gb|EEK87916.1| Biotin biosynthesis protein BioC [Bacillus cereus m1550]
gi|228654002|gb|EEL09869.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-Cer4]
gi|228799245|gb|EEM46210.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 242
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKSHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 ERLRLEESYDVIISNA 89
>gi|227824162|ref|YP_002828135.1| Fmu (Sun) domain protein [Sinorhizobium fredii NGR234]
gi|227343164|gb|ACP27382.1| Fmu (Sun) domain protein [Sinorhizobium fredii NGR234]
Length = 429
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+D +GGG G ++ + G V+ ++ K+ + + +++ R
Sbjct: 228 FPREGEQVLDYCAGGG--GKTLAMSAAMNNKGQVHAYDTDRKRLAPIIERLKRAGTRNVQ 285
Query: 128 FACRIQEAPQMITTCDVI 145
+ + CD +
Sbjct: 286 VHESAEALASLAGRCDRV 303
>gi|254447043|ref|ZP_05060510.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [gamma proteobacterium HTCC5015]
gi|198263182|gb|EDY87460.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [gamma proteobacterium HTCC5015]
Length = 285
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DL +GGG I + + V + + R V +G+V
Sbjct: 120 PQRVLDLCTGGGCIAIACAYAFPDAQ---VVGTDISEAALAVARRNVAAHQLQGRVQCLS 176
Query: 132 IQEAPQMITTCDVISA 147
+ D+I +
Sbjct: 177 SDVFSNVEGCFDLIVS 192
>gi|16273188|ref|NP_439426.1| hypothetical protein HI1273 [Haemophilus influenzae Rd KW20]
gi|260581396|ref|ZP_05849210.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1175601|sp|P44150|Y1273_HAEIN RecName: Full=Uncharacterized protein HI_1273
gi|1574728|gb|AAC22921.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260091938|gb|EEW75887.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 268
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DEAVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKFGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVIS-ARA--LADLDTLLE 158
+ + DV+ +R+ + DLD ++E
Sbjct: 115 SWADNWDDVPQADVVLASRSTLVDDLDDMIE 145
>gi|326427716|gb|EGD73286.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 319
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 15/93 (16%)
Query: 61 DSLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D +++ + +D+G G G S+ + V +E+ + F +
Sbjct: 13 DGIQLAADAVIKGGVVMDIGCGSGL----LSLLSARTGARKVIAVEA----SDFYEAAEK 64
Query: 120 KTAARG-----KVFACRIQEAPQMITTCDVISA 147
AA G V R+++ + D I +
Sbjct: 65 VIAANGYSECIDVLHSRVEDVED-VEQVDCIVS 96
>gi|298675111|ref|YP_003726861.1| type 11 methyltransferase [Methanohalobium evestigatum Z-7303]
gi|298288099|gb|ADI74065.1| Methyltransferase type 11 [Methanohalobium evestigatum Z-7303]
Length = 249
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P +D+G G G I + ++ + K L +
Sbjct: 31 IPSLPPEPRILDIGCGIGMQTIHLAGICKDCHITATDIYQPYLDK---LMENAAEKGVAN 87
Query: 126 KVFACRI--QEAPQMITTCDVI 145
++F R + P D+I
Sbjct: 88 RIFTVRASMDDLPFEDDEFDLI 109
>gi|289765719|ref|ZP_06525097.1| methyltransferase [Fusobacterium sp. D11]
gi|289717274|gb|EFD81286.1| methyltransferase [Fusobacterium sp. D11]
Length = 370
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ + I+ K
Sbjct: 174 CIQLMREVEEPN-ILDIGSGSGAISIAIA---NELKSSSITGIDINEKAIKLANENKILN 229
Query: 122 AARGKVFAC-RIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 230 KIENVNFIESNLFEKLDKDFKYDLIVS 256
>gi|223967109|emb|CAR93285.1| CG6554-PA [Drosophila melanogaster]
Length = 376
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 87 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVIDNNLQDV 141
Query: 126 -KVFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 142 ITVVKGKIEEIELPNGIEGVDIIIS 166
>gi|149277880|ref|ZP_01884020.1| arsenite S-adenosylmethyltransferase [Pedobacter sp. BAL39]
gi|149231568|gb|EDM36947.1| arsenite S-adenosylmethyltransferase [Pedobacter sp. BAL39]
Length = 280
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 5/81 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ IDLGSG G + + E G V I+ R +K A
Sbjct: 73 IKKGDVVIDLGSGAGNDAFV---ARAETGETGKVIGIDFTPAMIKKARINAEKLAFHNIE 129
Query: 128 FA-CRIQEAPQMITTCDVISA 147
F I+ P DVI +
Sbjct: 130 FRQGDIEHMPVTANAADVIVS 150
>gi|116812047|emb|CAL26190.1| CG6554 [Drosophila melanogaster]
Length = 376
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 87 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVIDNNLQDV 141
Query: 126 -KVFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 142 ITVVKGKIEEIELPNGIEGVDIIIS 166
>gi|148654736|ref|YP_001274941.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Roseiflexus sp.
RS-1]
gi|148566846|gb|ABQ88991.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Roseiflexus
sp. RS-1]
Length = 408
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL L P ++W D+G+G G GI + V IE + + + ++ +++
Sbjct: 245 SLAELALQPGETLW-DIGAGSGSVGIEAARACP---TARVYAIERRERFVAHMQENLRRF 300
Query: 122 AARG-KVFACRIQEA 135
A +V EA
Sbjct: 301 PAPNLRVIHGEAPEA 315
>gi|30022202|ref|NP_833833.1| biotin synthesis protein BioC [Bacillus cereus ATCC 14579]
gi|218233118|ref|YP_002368920.1| putative biotin synthesis protein BioC [Bacillus cereus B4264]
gi|29897759|gb|AAP11034.1| Biotin synthesis protein bioC [Bacillus cereus ATCC 14579]
gi|218161075|gb|ACK61067.1| putative biotin synthesis protein BioC [Bacillus cereus B4264]
Length = 269
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 47 RILELGCGTGYVTEQLSKLFPKSHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 100
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 101 ERLRLEESYDVIISNA 116
>gi|21356361|ref|NP_650017.1| arginine methyltransferase 1 [Drosophila melanogaster]
gi|7299364|gb|AAF54556.1| arginine methyltransferase 1 [Drosophila melanogaster]
gi|20152019|gb|AAM11369.1| LD28808p [Drosophila melanogaster]
gi|116812045|emb|CAL26189.1| CG6554 [Drosophila melanogaster]
gi|116812049|emb|CAL26191.1| CG6554 [Drosophila melanogaster]
gi|116812051|emb|CAL26206.1| CG6554 [Drosophila melanogaster]
gi|116812053|emb|CAL26207.1| CG6554 [Drosophila melanogaster]
gi|116812055|emb|CAL26208.1| CG6554 [Drosophila melanogaster]
gi|116812057|emb|CAL26209.1| CG6554 [Drosophila melanogaster]
gi|116812059|emb|CAL26210.1| CG6554 [Drosophila melanogaster]
gi|116812061|emb|CAL26211.1| CG6554 [Drosophila melanogaster]
gi|116812063|emb|CAL26212.1| CG6554 [Drosophila melanogaster]
gi|116812065|emb|CAL26213.1| CG6554 [Drosophila melanogaster]
gi|220945832|gb|ACL85459.1| Art1-PA [synthetic construct]
gi|220955588|gb|ACL90337.1| Art1-PA [synthetic construct]
gi|223967097|emb|CAR93279.1| CG6554-PA [Drosophila melanogaster]
gi|223967099|emb|CAR93280.1| CG6554-PA [Drosophila melanogaster]
gi|223967101|emb|CAR93281.1| CG6554-PA [Drosophila melanogaster]
gi|223967103|emb|CAR93282.1| CG6554-PA [Drosophila melanogaster]
gi|223967105|emb|CAR93283.1| CG6554-PA [Drosophila melanogaster]
gi|223967107|emb|CAR93284.1| CG6554-PA [Drosophila melanogaster]
gi|223967111|emb|CAR93286.1| CG6554-PA [Drosophila melanogaster]
gi|223967113|emb|CAR93287.1| CG6554-PA [Drosophila melanogaster]
gi|223967115|emb|CAR93288.1| CG6554-PA [Drosophila melanogaster]
gi|223967117|emb|CAR93289.1| CG6554-PA [Drosophila melanogaster]
Length = 376
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 87 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVIDNNLQDV 141
Query: 126 -KVFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 142 ITVVKGKIEEIELPNGIEGVDIIIS 166
>gi|329297754|ref|ZP_08255090.1| 16S ribosomal RNA m2G1207 methyltransferase [Plautia stali
symbiont]
Length = 343
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + + L + + +
Sbjct: 187 LLLSTLTPHTKGKVLDIGCGSGVLAAALAQHSPKVR---LWLCDVHAAAIEASKATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VF + + D+I +
Sbjct: 244 GLEGEVFVSNV--FSDVSGRFDLIIS 267
>gi|324514729|gb|ADY45968.1| Hexaprenyldihydroxybenzoate methyltransferase [Ascaris suum]
Length = 297
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 17/119 (14%)
Query: 59 VEDSLRVFQLHPYPS----IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+ DS+ +D+G GGG I + +S+ G E+ +
Sbjct: 90 IVDSITKADPDQQEQLAGIRLVDVGCGGGLLSIPLARLGASLCGID-ASEEAVRAACIAV 148
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITT----CDVISARA------LADLDTLLEYSFPW 163
+ + + T D + A +A++DT ++
Sbjct: 149 SSAFHASPPKCGEVHLECSTVEKFAETNASGFDAVV--ASEIVEHVANVDTFIKACVRL 205
>gi|326203864|ref|ZP_08193726.1| methyltransferase small [Clostridium papyrosolvens DSM 2782]
gi|325985962|gb|EGD46796.1| methyltransferase small [Clostridium papyrosolvens DSM 2782]
Length = 198
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 3/82 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P +D+G G G G+ + +I+ N+ + +
Sbjct: 51 IKNFTPSGLSVLDIGCGYGAIGLFIKSIFPQ---QTITMIDVNNRALEYTKKNAASNNLS 107
Query: 125 GKVFACRIQEAPQMITTCDVIS 146
+ + + T D+IS
Sbjct: 108 IEALNSNLFSSLNERTFDDIIS 129
>gi|254515299|ref|ZP_05127360.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[gamma proteobacterium NOR5-3]
gi|219677542|gb|EED33907.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[gamma proteobacterium NOR5-3]
Length = 278
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P + +DLG+G G + + + V +E + + ++
Sbjct: 101 ALALELPESATVLDLGTGSGAIALALATERPQWR---VLGVERSPEALAVAIDNARQLGL 157
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
V Q++ D+I +
Sbjct: 158 D-SVQWLSSDWFSQVVGRFDLIVS 180
>gi|295129604|ref|YP_003580267.1| methyltransferase domain protein [Propionibacterium acnes SK137]
gi|291376552|gb|ADE00407.1| methyltransferase domain protein [Propionibacterium acnes SK137]
Length = 265
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 7/85 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V ++ S +D+G G G I + G V +++ S L ++
Sbjct: 52 AAVTEIVEPGSSVLDVGGGTGRFAIPLA-----QRGCRVTVLDRSEDMLSVLESSAEEKD 106
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
V + + D + A
Sbjct: 107 VEIDVVHQ--EWPADLGCQFDSVIA 129
>gi|167627297|ref|YP_001677797.1| HemK family modification methylase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597298|gb|ABZ87296.1| modification methylase, HemK family [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 285
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 18/117 (15%)
Query: 39 WSKKINLVS----SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
W++K+ + + + V D ++ +DLG+G G + + +L
Sbjct: 82 WNQKLYVTKDTLIPRADTEAVVAAVLDDIQ---DKNAQLKILDLGTGSGAIALALAEELP 138
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI----TTCDVISA 147
+ V+L V +K A K+ ++ T D+I +
Sbjct: 139 KSQVVAVDLYSKTL-------DVAKKNALANKIVNVEFMQSSWYENLDATKFDIIVS 188
>gi|289606891|emb|CBI60961.1| unnamed protein product [Sordaria macrospora]
Length = 275
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 117 VVQKTAARGKVFA-CRIQEAPQMITTCDVISARALADLDTL 156
+ Q V +I++ +ISARA+A L L
Sbjct: 1 MAQALGLTNVVVHQAKIEKLAADRPAA-IISARAVAKLSAL 40
>gi|228909948|ref|ZP_04073769.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis IBL 200]
gi|228849783|gb|EEM94616.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis IBL 200]
Length = 242
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 EQLRLEESYDVIISNA 89
>gi|255533210|ref|YP_003093582.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase [Pedobacter heparinus DSM 2366]
gi|255346194|gb|ACU05520.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase [Pedobacter heparinus DSM 2366]
Length = 371
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 15/141 (10%)
Query: 26 LEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFP 85
+E+ L + V D +H + +L P + G G
Sbjct: 151 MEQFFPAANLLKTGNPV-----RKDVVDILNKHYA-GAELLKLDPLKKTILVTGGSLGAG 204
Query: 86 GIITSIQLSSIE--GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTC- 142
+ SI+ +E V LI K S+ + +V++ ++ +M
Sbjct: 205 TLNKSIEKHILEILDADVQLIWQTGK--SYYKGIVERLGLDFHPNVRILEFLNKMDLAYA 262
Query: 143 --DVISARALADLDTLLEYSF 161
DVI +RA A T+ E
Sbjct: 263 AADVIVSRAGA--GTIAELCL 281
>gi|256826282|ref|YP_003150242.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
gi|256689675|gb|ACV07477.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
Length = 522
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P + +D+G+G G + + V + + F R+
Sbjct: 171 LAAWTPRPEVARALDIGTGCGVQALHLT-----HHAQRVVATDISERALEFARFTCALNG 225
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + E P D+I +
Sbjct: 226 VELDLRHGSLTE-PVAGEEFDLIVS 249
>gi|262199895|ref|YP_003271104.1| methyltransferase type 11 [Haliangium ochraceum DSM 14365]
gi|262083242|gb|ACY19211.1| Methyltransferase type 11 [Haliangium ochraceum DSM 14365]
Length = 286
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
S TVE + D L S ID G+G G + +NL E+
Sbjct: 57 SRRTVERMAGQ--LDGLGA------DSRVIDFGAGYGGAARFLA-ARYGCSVTCLNLSET 107
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+N++ L Q + R V + P + DV+ +
Sbjct: 108 QNRRNRAL-TAEQGLSERVDVIHGSFESVPVDDDSYDVVWS 147
>gi|195499863|ref|XP_002097128.1| GE24666 [Drosophila yakuba]
gi|194183229|gb|EDW96840.1| GE24666 [Drosophila yakuba]
Length = 378
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 89 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVIDNNLQDV 143
Query: 127 --VFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 144 IKVVKGKIEEIELPNGIEGVDIIIS 168
>gi|194742459|ref|XP_001953720.1| GF17088 [Drosophila ananassae]
gi|190626757|gb|EDV42281.1| GF17088 [Drosophila ananassae]
Length = 372
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G I S+ + V ++ N F R VV +
Sbjct: 83 KHLFQGKTVLDVGCGTG----ILSMFAAKAGAAQVIAVDCSN-IIEFARQVVIDNNLQDV 137
Query: 127 --VFACRIQ--EAPQMITTCDVISA 147
V +I+ E P I D+I +
Sbjct: 138 IKVVKGKIEEIELPNGIEGVDIIIS 162
>gi|187734558|ref|YP_001876670.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Akkermansia muciniphila ATCC BAA-835]
gi|187424610|gb|ACD03889.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Akkermansia muciniphila ATCC BAA-835]
Length = 301
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 34/137 (24%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ + + ++ +P +D+G+G G G+ +++L G V L
Sbjct: 92 LIPRPETEELVE------MVLKKIPDHPVRILDMGTGSGVIGVTLALELKE-RAGEVVLA 144
Query: 105 ESKNKKASFLRYVVQKTAARGKVFAC-------------RIQEAPQMITT---------- 141
+ + + AR ++A
Sbjct: 145 DISPQALDLALENAMRLGARVSTIQTNLFANISQEKTDPHAEDADSAPEGKKGENGRNML 204
Query: 142 CDVISARALADLDTLLE 158
DVI +A+L + E
Sbjct: 205 FDVI----VANLPYIAE 217
>gi|297584725|ref|YP_003700505.1| O-methyltransferase family 3 [Bacillus selenitireducens MLS10]
gi|297143182|gb|ADH99939.1| O-methyltransferase family 3 [Bacillus selenitireducens MLS10]
Length = 227
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 31/163 (19%)
Query: 14 YLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLH---P 70
YL S E + LE + L ++ R DS+ V +
Sbjct: 7 YLDQLIGQSDEDFQALERYAEL----NQV----------PIMER---DSISVMLHYMRVL 49
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
P +++G+ G+ G S L ++E + +E ++A +V
Sbjct: 50 QPKNVLEIGTAIGYSG---SRILKAVEAASLVTVERDEERARKAEDTFLTFGLDDRVVLY 106
Query: 129 ---ACRIQEAPQMITTCD--VISARALADLDTLLEYSFPWLYQ 166
A I+++ + D I A A +T P++ +
Sbjct: 107 KEDALHIEDSVRRHAPFDSLFIDA-AKGQYETFFNLYAPFVRE 148
>gi|124025122|ref|YP_001014238.1| putative protein methyltransferase [Prochlorococcus marinus str.
NATL1A]
gi|123960190|gb|ABM74973.1| putative protein methyltransferase [Prochlorococcus marinus str.
NATL1A]
Length = 273
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 13/92 (14%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + ++ + W DLG+G G + + L + G V++ L +
Sbjct: 93 IALKKITNFDSGRWADLGTGSGAIAVSLAKSLPNWNGHAVDIS------NEALELAKRNL 146
Query: 122 AARGKVFACRI------QEAPQMITTCDVISA 147
A R + + D++ +
Sbjct: 147 KAIVPNANVRFSLGDWWEPLKRWRGRFDLVLS 178
>gi|47937503|gb|AAH72069.1| LOC398716 protein [Xenopus laevis]
Length = 343
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|147900951|ref|NP_001082771.1| protein arginine N-methyltransferase 1-B [Xenopus laevis]
gi|82089884|sp|Q6VRB0|ANM1B_XENLA RecName: Full=Protein arginine N-methyltransferase 1-B;
Short=xPRMT1b; AltName: Full=Arginine methyltransferase
1b; AltName: Full=Histone-arginine N-methyltransferase
PRMT1-B
gi|34396086|gb|AAQ65243.1| arginine methyltransferase 1b [Xenopus laevis]
Length = 351
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 64 RHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVV---- 119
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 120 ---TIIKGKVEEVELPVEKVDIIIS 141
>gi|32766457|gb|AAH54955.1| XPRMT1 protein [Xenopus laevis]
Length = 343
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|27882628|gb|AAH44033.1| XPRMT1 protein [Xenopus laevis]
Length = 370
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 83 RHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVV---- 138
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 139 ---TIIKGKVEEVELPVEKVDIIIS 160
>gi|54020767|ref|NP_001005629.1| protein arginine N-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
gi|49257756|gb|AAH74614.1| protein arginine methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|76779910|gb|AAI06276.1| LOC398716 protein [Xenopus laevis]
Length = 343
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|20092272|ref|NP_618347.1| hypothetical protein MA3459 [Methanosarcina acetivorans C2A]
gi|19917510|gb|AAM06827.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 249
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 65 VFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V + P +D+G+G GF I+ + G V I+ F R+ + +
Sbjct: 38 VLEYAPSRDCLDILDIGTGPGFFPIVLT-----QGGHNVTGIDLTENMIEFARFNLAREG 92
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR 148
+ Q + D++ R
Sbjct: 93 VNANLMTMDCQNLKFPDNSFDLLVCR 118
>gi|123892812|sp|Q28F07|ANM1_XENTR RecName: Full=Protein arginine N-methyltransferase 1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein
methyltransferase-like protein 2; AltName:
Full=Histone-arginine N-methyltransferase PRMT1
gi|89269901|emb|CAJ83544.1| HMT1 hnRNP methyltransferase-like 2 (S. cerevisiae) [Xenopus
(Silurana) tropicalis]
Length = 351
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 64 RHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVV---- 119
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 120 ---TIIKGKVEEVELPVEKVDIIIS 141
>gi|55980410|ref|YP_143707.1| HemK family methyltransferase [Thermus thermophilus HB8]
gi|55771823|dbj|BAD70264.1| methyltransferase, HemK family [Thermus thermophilus HB8]
Length = 500
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P +D+G+G G + L E V E K + R ++
Sbjct: 109 LALGLPLPPAPRILDVGTGTGAIALALKRALPEAE---VYATEVDPKALALARENAERLG 165
Query: 123 ARG 125
Sbjct: 166 LSV 168
>gi|39932512|sp|Q7W5Z6|UBIG_BORPA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
Length = 241
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 38/159 (23%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----Y 71
NV + +EK +W E +F H + LR+ +
Sbjct: 11 GVNVDQAEVEKFSALAA---RW---------WDPESEFKPLHAINPLRLGWIQETAGSLS 58
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG ++ + + G ++L E K A ++ + A
Sbjct: 59 GKRVLDVGCGGGILSESMAVAGAQVTG--IDLAEKSLKIARLHGL---ESGVKVDYRAVP 113
Query: 132 IQE-APQMITTCDVISA--------------RALADLDT 155
++E A + DV++ RA A L
Sbjct: 114 VEELAAEQPGQYDVVTCMEMLEHVPDPASVVRACAALAK 152
>gi|33597668|ref|NP_885311.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
parapertussis 12822]
gi|33574096|emb|CAE38421.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
parapertussis]
Length = 257
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 38/159 (23%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----Y 71
NV + +EK +W E +F H + LR+ +
Sbjct: 27 GVNVDQAEVEKFSALAA---RW---------WDPESEFKPLHAINPLRLGWIQETAGSLS 74
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG ++ + + G ++L E K A ++ + A
Sbjct: 75 GKRVLDVGCGGGILSESMAVAGAQVTG--IDLAEKSLKIARLHGL---ESGVKVDYRAVP 129
Query: 132 IQE-APQMITTCDVISA--------------RALADLDT 155
++E A + DV++ RA A L
Sbjct: 130 VEELAAEQPGQYDVVTCMEMLEHVPDPASVVRACAALAK 168
>gi|148226837|ref|NP_001083793.1| protein arginine N-methyltransferase 1-A [Xenopus laevis]
gi|82100158|sp|Q8AV13|ANM1A_XENLA RecName: Full=Protein arginine N-methyltransferase 1-A;
Short=xPRMT1; AltName: Full=Histone-arginine
N-methyltransferase PRMT1-A
gi|27530887|dbj|BAC53990.1| protein arginine methyltransferase 1 [Xenopus laevis]
Length = 369
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 82 RHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVV---- 137
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 138 ---TIIKGKVEEVELPVEKVDIIIS 159
>gi|310796687|gb|EFQ32148.1| methyltransferase domain-containing protein [Glomerella graminicola
M1.001]
Length = 543
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES--KNKKASFLRYVVQKTAARGKVFA 129
I +D+G G G I S+ + V ++ KA V A +
Sbjct: 240 DKIVLDIGCGTG----ILSMFCAKAGAKQVFAVDKSDIIDKARE-NVFVNGLADKVTCIR 294
Query: 130 CRIQEAPQMITTCDVISA 147
R+++ + D+I +
Sbjct: 295 GRVEDISLPVDQVDIIIS 312
>gi|296162264|ref|ZP_06845059.1| Methyltransferase type 11 [Burkholderia sp. Ch1-1]
gi|295887531|gb|EFG67354.1| Methyltransferase type 11 [Burkholderia sp. Ch1-1]
Length = 250
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/105 (10%), Positives = 33/105 (31%), Gaps = 10/105 (9%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L S + +R + +++ + + +D+G G G + V
Sbjct: 19 LTSPTHAAGADLRTLAEAIAATPI----ATVLDMGCGAGHASFAVA-----PHAKEVVAY 69
Query: 105 ESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+ + + + ++ + + P + D + +R
Sbjct: 70 DIAPQMLATVEGAAKERGLANIRTQQGAAEVLPFSDHSFDWVISR 114
>gi|209883252|ref|YP_002287109.1| 3-demethylubiquinone-9 3-O-methyltransferase [Oligotropha
carboxidovorans OM5]
gi|209871448|gb|ACI91244.1| 3-demethylubiquinone-9 3-O-methyltransferase [Oligotropha
carboxidovorans OM5]
Length = 254
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 26/86 (30%), Gaps = 10/86 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +D+G G G + + V I+ + + ++
Sbjct: 67 SLTCLS----GLRVLDIGCGAGLLCEPLARLGAE-----VVGIDPSETNIAVAKLHAERG 117
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
A ++ A M D++ A
Sbjct: 118 HLSIDYRATTVE-AIDMRERFDIVLA 142
>gi|260063120|ref|YP_003196200.1| putative protoporphyrinogen oxidase [Robiginitalea biformata
HTCC2501]
gi|88784689|gb|EAR15859.1| putative protoporphyrinogen oxidase [Robiginitalea biformata
HTCC2501]
Length = 304
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 27/105 (25%), Gaps = 22/105 (20%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
RH D +D+G+G G + + L V ++ +
Sbjct: 105 VLERHAAD--------LREGNILDIGTGSGCIALGLAKSLP---AARVTALDISGEALEV 153
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITT-----------CDVISA 147
R + ++ I+ D+I +
Sbjct: 154 ARENARHLGLDVRLVRADIRNPEGEWPESILNPEGEWPGYDLIIS 198
>gi|119357671|ref|YP_912315.1| HemK family modification methylase [Chlorobium phaeobacteroides DSM
266]
gi|119355020|gb|ABL65891.1| modification methylase, HemK family [Chlorobium phaeobacteroides
DSM 266]
Length = 301
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 33/108 (30%), Gaps = 11/108 (10%)
Query: 48 SSTVEDFWIRH---VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
+ + H + + +D+G+G G + + +L + +V I
Sbjct: 103 PRPETELLVEHALEFLGHVSAADVSEAALHLLDIGTGSGCIAVTLASRLPCL---MVTAI 159
Query: 105 ESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMIT---TCDVISA 147
+ + R ++ R + + P DVI +
Sbjct: 160 DISTEALVVARNNAERHGVADRIRFLHADLFSLPDERGLSAPFDVIVS 207
>gi|330685124|gb|EGG96788.1| RND transporter [Staphylococcus epidermidis VCU121]
Length = 1054
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG--GLVNLIESK 107
D ++HV DS + HP DLG+G G I ++Q S + G V+ IES
Sbjct: 663 EEPDKVLKHV-DSFK----HPGQWKNQDLGTGAGNDSIEVTVQGPSTDAIKGTVHKIEST 717
Query: 108 NKKASFLRYVVQKT 121
K + V
Sbjct: 718 MKDVKGINNVKSDL 731
>gi|256027763|ref|ZP_05441597.1| methyltransferase [Fusobacterium sp. D11]
Length = 383
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ + I+ K
Sbjct: 187 CIQLMREVEEPN-ILDIGSGSGAISIAIA---NELKSSSITGIDINEKAIKLANENKILN 242
Query: 122 AARGKVFAC-RIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 243 KIENVNFIESNLFEKLDKDFKYDLIVS 269
>gi|239635999|ref|ZP_04677016.1| AcrB/AcrD/AcrF family protein [Staphylococcus warneri L37603]
gi|239598464|gb|EEQ80944.1| AcrB/AcrD/AcrF family protein [Staphylococcus warneri L37603]
Length = 1054
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEG--GLVNLIESK 107
D ++HV DS + HP DLG+G G I ++Q S + G V+ IES
Sbjct: 663 EEPDKVLKHV-DSFK----HPGQWKNQDLGTGAGNDSIEVTVQGPSTDAIKGTVHKIEST 717
Query: 108 NKKASFLRYVVQKT 121
K + V
Sbjct: 718 MKDVKGINNVKSDL 731
>gi|229180397|ref|ZP_04307740.1| Biotin biosynthesis protein BioC [Bacillus cereus 172560W]
gi|228603144|gb|EEK60622.1| Biotin biosynthesis protein BioC [Bacillus cereus 172560W]
Length = 242
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 EQLRLEESYDVIISNA 89
>gi|254362678|ref|ZP_04978765.1| tellurite resistance protein TehB [Mannheimia haemolytica PHL213]
gi|261496549|ref|ZP_05992929.1| tellurite resistance protein TehB [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|153094297|gb|EDN75161.1| tellurite resistance protein TehB [Mannheimia haemolytica PHL213]
gi|261307752|gb|EEY09075.1| tellurite resistance protein TehB [Mannheimia haemolytica serotype
A2 str. OVINE]
Length = 290
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 19/130 (14%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S + +L ++ ++KK NL + T + L +DLG
Sbjct: 80 LSDDLECQLAFYCKPEDYFAKKYNLTA--THSEV--------LNAVNYTK-GGKALDLGC 128
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEA--PQ 137
G G + ++ G V ++ + FL Y+++K A+ A I EA
Sbjct: 129 GRGRNALYLNLL-----GFDVTAVDHNQESIDFLNYMIEKEQAQNITTAVYDINEATIGS 183
Query: 138 MITTCDVISA 147
D+I +
Sbjct: 184 QNGEYDLIIS 193
>gi|145609305|ref|XP_001409361.1| hypothetical protein MGG_13406 [Magnaporthe oryzae 70-15]
gi|145016692|gb|EDK01122.1| hypothetical protein MGG_13406 [Magnaporthe oryzae 70-15]
Length = 264
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I + G V I+ ++ + + + TA R
Sbjct: 35 GMHILDVGCGPG--NITAHLAKLVGPTGRVAGIDPSKERIALGQELAASTAPNASFAVGR 92
Query: 132 IQEAPQM-ITTCDVI 145
++ + + DV+
Sbjct: 93 AEDLSRFQDASFDVV 107
>gi|119483056|ref|XP_001261556.1| ubiE/COQ5 methyltransferase, putative [Neosartorya fischeri NRRL
181]
gi|119409711|gb|EAW19659.1| ubiE/COQ5 methyltransferase, putative [Neosartorya fischeri NRRL
181]
Length = 276
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G G G + + + + L S ++A L ++
Sbjct: 31 AYLLPHLRPDMHILDIGCGPGTITVDLARLIPQGHITGLELSPSVLEQARAL--AADQSL 88
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ P T D++
Sbjct: 89 TNITFLSADANALPFEEGTFDLVLC 113
>gi|32491193|ref|NP_871447.1| 3-demethylubiquinone-9 3-methyltransferase [Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis]
gi|25166400|dbj|BAC24590.1| ubiG [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 226
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 20/107 (18%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G G G S EGG+V I++ K +Y +K +
Sbjct: 43 FGKKILDIGCGAGILSEGLS-----KEGGMVTGIDTSKKMIHHAKYHAKKNKIKVSYIHE 97
Query: 131 RIQ-EAPQMITTCDVISARALADLDTL--LEY-------SFPWLYQK 167
+ + D+I+ ++ L +EY + K
Sbjct: 98 DAKTHLKKYKKFYDIITC-----MEVLEHVEYPKDIINSCSHLIKDK 139
>gi|46127001|ref|XP_388054.1| hypothetical protein FG07878.1 [Gibberella zeae PH-1]
Length = 671
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 14/102 (13%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G+G G I + + + V+L + +F+
Sbjct: 93 EPDSKAKHILDIGTGTGIWAIDYADEHPEAQVVGVDLSPIQP---AFV-------PPNLT 142
Query: 127 VFACRIQEAPQMITTCDVISAR----ALADLDTLLEYSFPWL 164
I++ + D I +R ALA L + ++
Sbjct: 143 FMIEDIEDEWNYSQSFDYIHSRFMSSALASWTDFLTKCYKYV 184
>gi|322389536|ref|ZP_08063087.1| protein-(glutamine-N5) methyltransferase [Streptococcus
parasanguinis ATCC 903]
gi|321143811|gb|EFX39238.1| protein-(glutamine-N5) methyltransferase [Streptococcus
parasanguinis ATCC 903]
Length = 278
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G+G G I ++ + + V + + + + ++
Sbjct: 101 LILEENDEKALRVLDIGTGSGAIAISLALARPTWQ---VQASDVSEEALALAQENAKQLE 157
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A + + + ++ D+I +
Sbjct: 158 AALEFKSSDV--LDELEGPYDLIVS 180
>gi|260596626|ref|YP_003209197.1| hypothetical protein CTU_08340 [Cronobacter turicensis z3032]
gi|260215803|emb|CBA28248.1| Uncharacterized protein yafE [Cronobacter turicensis z3032]
Length = 256
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFACR 131
+ +DLG G G + + V + + + + ++
Sbjct: 46 ARLLDLGCGAGHASFTAA-----EQVREVVAYDLSSSMLTVVEEAARERGLTHLSTCQGY 100
Query: 132 IQEAPQMITTCDVISAR 148
+ P + D++ +R
Sbjct: 101 AESLPFEAESFDIVISR 117
>gi|229071622|ref|ZP_04204840.1| Biotin biosynthesis protein BioC [Bacillus cereus F65185]
gi|228711558|gb|EEL63515.1| Biotin biosynthesis protein BioC [Bacillus cereus F65185]
Length = 242
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 EQLRLEESYDVIISNA 89
>gi|170768477|ref|ZP_02902930.1| ribosomal RNA small subunit methyltransferase C [Escherichia
albertii TW07627]
gi|170122581|gb|EDS91512.1| ribosomal RNA small subunit methyltransferase C [Escherichia
albertii TW07627]
Length = 343
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVEDS---LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D+ L + L P+ +D+G G G + + I
Sbjct: 167 LT-IKTLPGVFSRDGLDAGSQLLLSTLTPHTKGKVLDIGCGTGVLSVAFARHSPKIR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G+VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLVANGIEGEVFASNV--FSEVKGRFDMIIS 267
>gi|21674573|ref|NP_662638.1| UbiE/COQ5 family methlytransferase [Chlorobium tepidum TLS]
gi|21647770|gb|AAM72980.1| methyltransferase, UbiE/COQ5 family [Chlorobium tepidum TLS]
Length = 275
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFA 129
+DLG G G + L+ I V +++ + R + R V
Sbjct: 102 SGRCVDLGGGPGM----LGVCLAKITSLTVTVVDLMPECVELARENSAEAGVAERVDVVQ 157
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D++ +R
Sbjct: 158 GVAEALPFDDASIDLVVSR 176
>gi|331701361|ref|YP_004398320.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus buchneri
NRRL B-30929]
gi|329128704|gb|AEB73257.1| Ribosomal protein L11 methyltransferase [Lactobacillus buchneri
NRRL B-30929]
Length = 320
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 19/110 (17%)
Query: 62 SLRVFQLH-PYPSIWIDLGSGGGFPGIITSIQLS-SIEGGLVN--LIESKNKKASFLRYV 117
SL+ ++ +D+G+G G I + + I V+ +ES K
Sbjct: 168 SLQALEMVMQGGESILDVGTGSGVLSIAAKLMGAGEIHAFDVDDIAVESAEKNI------ 221
Query: 118 VQKTAARGKVFACRIQE-APQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ K + + T D++ A + L E P + Q
Sbjct: 222 --QLNPGAKGIHVAANDLLAGIHTQVDIVVA------NILAEIIVPLVPQ 263
>gi|321442011|gb|ADW85420.1| arg methyltransferase [Platynota idaeusalis]
Length = 244
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIVEANRLDDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|305662621|ref|YP_003858909.1| methyltransferase small [Ignisphaera aggregans DSM 17230]
gi|304377190|gb|ADM27029.1| methyltransferase small [Ignisphaera aggregans DSM 17230]
Length = 198
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +DLG G G GI+ ++ +E V +++ + + ++ R K+
Sbjct: 54 IPSEGRVLDLGCGYGAIGIVVALLNPKLE---VYMVDINREAVR----LAERNVIRNKID 106
Query: 129 ACRI 132
RI
Sbjct: 107 PQRI 110
>gi|289547807|ref|YP_003472795.1| methyltransferase type 11 [Thermocrinis albus DSM 14484]
gi|289181424|gb|ADC88668.1| Methyltransferase type 11 [Thermocrinis albus DSM 14484]
Length = 210
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 12/99 (12%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
E L+ W ++ V S +E + + P ++G+G G G
Sbjct: 5 FEDLVKLYDDWYERHRAVYVSELE-----------AIREHLPKEGTGAEIGTGTGRFGPP 53
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
I L + L+ +K + + +R V + +G+V
Sbjct: 54 LGIFLGVEPSRSMALV-AKERGMTVIRGVAEYLPLKGEV 91
>gi|301092430|ref|XP_002997071.1| arginine N-methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262112085|gb|EEY70137.1| arginine N-methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 377
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 14/86 (16%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
H + +D+G+G G I SI + V +E+ + + A
Sbjct: 57 PNHFKDKVVLDVGTGSG----ILSIWAAQAGARKVYAVEA----TDIAQQARKVIKANNQ 108
Query: 126 ----KVFACRIQEAPQMITTCDVISA 147
V +I+EA ++ DVI +
Sbjct: 109 DHIITVIQSKIEEA-ELPEKVDVIIS 133
>gi|229081374|ref|ZP_04213877.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock4-2]
gi|228701996|gb|EEL54479.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock4-2]
Length = 242
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 20 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 73
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 74 EQLRLEESYDVIISNA 89
>gi|167718593|ref|ZP_02401829.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
pseudomallei DM98]
Length = 251
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + V + + + + ++ ++
Sbjct: 42 GARVLDLGCGAGHASFAAARSGAH----EVIAYDLAPQMLATVEAAARERGLSNVRIEQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ P D I +R
Sbjct: 98 AAERLPFADALFDWIVSR 115
>gi|116751314|ref|YP_848001.1| 50S ribosomal protein L11 methyltransferase [Syntrophobacter
fumaroxidans MPOB]
gi|166223498|sp|A0LQ64|PRMA_SYNFM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|116700378|gb|ABK19566.1| LSU ribosomal protein L11P methyltransferase [Syntrophobacter
fumaroxidans MPOB]
Length = 290
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 14/106 (13%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P +D+G+G G I ++ + + V ++ + + A
Sbjct: 147 ALQALPSAPGSLLDVGTGSG----ILAVAAALLGFHPVQAVDDDP---EAVEVAAENIAL 199
Query: 124 RGKVFACR--IQEAPQMITTCDVISA--RA---LADLDTLLEYSFP 162
G A A Q DV+ A +A + L+ + P
Sbjct: 200 NGMESAIELLAGTARQASGAFDVVIANIQAIPLVGMASELVRLTAP 245
>gi|321441995|gb|ADW85412.1| arg methyltransferase [Eterusia aedea]
Length = 244
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIVEANRLDDI 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|313764941|gb|EFS36305.1| methyltransferase domain protein [Propionibacterium acnes HL013PA1]
gi|313792488|gb|EFS40574.1| methyltransferase domain protein [Propionibacterium acnes HL110PA1]
gi|313803489|gb|EFS44671.1| methyltransferase domain protein [Propionibacterium acnes HL110PA2]
gi|313806938|gb|EFS45436.1| methyltransferase domain protein [Propionibacterium acnes HL087PA2]
gi|313814142|gb|EFS51856.1| methyltransferase domain protein [Propionibacterium acnes HL025PA1]
gi|313815497|gb|EFS53211.1| methyltransferase domain protein [Propionibacterium acnes HL059PA1]
gi|313817721|gb|EFS55435.1| methyltransferase domain protein [Propionibacterium acnes HL046PA2]
gi|313821452|gb|EFS59166.1| methyltransferase domain protein [Propionibacterium acnes HL036PA1]
gi|313824603|gb|EFS62317.1| methyltransferase domain protein [Propionibacterium acnes HL036PA2]
gi|313826274|gb|EFS63988.1| methyltransferase domain protein [Propionibacterium acnes HL063PA1]
gi|313829064|gb|EFS66778.1| methyltransferase domain protein [Propionibacterium acnes HL063PA2]
gi|314916293|gb|EFS80124.1| methyltransferase domain protein [Propionibacterium acnes HL005PA4]
gi|314917563|gb|EFS81394.1| methyltransferase domain protein [Propionibacterium acnes HL050PA1]
gi|314921896|gb|EFS85727.1| methyltransferase domain protein [Propionibacterium acnes HL050PA3]
gi|314926494|gb|EFS90325.1| methyltransferase domain protein [Propionibacterium acnes HL036PA3]
gi|314930839|gb|EFS94670.1| methyltransferase domain protein [Propionibacterium acnes HL067PA1]
gi|314955234|gb|EFS99639.1| methyltransferase domain protein [Propionibacterium acnes HL027PA1]
gi|314959237|gb|EFT03339.1| methyltransferase domain protein [Propionibacterium acnes HL002PA1]
gi|314961409|gb|EFT05510.1| methyltransferase domain protein [Propionibacterium acnes HL002PA2]
gi|314964199|gb|EFT08299.1| methyltransferase domain protein [Propionibacterium acnes HL082PA1]
gi|314969311|gb|EFT13409.1| methyltransferase domain protein [Propionibacterium acnes HL037PA1]
gi|314980175|gb|EFT24269.1| methyltransferase domain protein [Propionibacterium acnes HL072PA2]
gi|314987030|gb|EFT31122.1| methyltransferase domain protein [Propionibacterium acnes HL005PA2]
gi|314990476|gb|EFT34567.1| methyltransferase domain protein [Propionibacterium acnes HL005PA3]
gi|315078893|gb|EFT50911.1| methyltransferase domain protein [Propionibacterium acnes HL053PA2]
gi|315081662|gb|EFT53638.1| methyltransferase domain protein [Propionibacterium acnes HL078PA1]
gi|315083164|gb|EFT55140.1| methyltransferase domain protein [Propionibacterium acnes HL027PA2]
gi|315086691|gb|EFT58667.1| methyltransferase domain protein [Propionibacterium acnes HL002PA3]
gi|315088095|gb|EFT60071.1| methyltransferase domain protein [Propionibacterium acnes HL072PA1]
gi|315099689|gb|EFT71665.1| methyltransferase domain protein [Propionibacterium acnes HL059PA2]
gi|315102078|gb|EFT74054.1| methyltransferase domain protein [Propionibacterium acnes HL046PA1]
gi|315107642|gb|EFT79618.1| methyltransferase domain protein [Propionibacterium acnes HL030PA1]
gi|315110051|gb|EFT82027.1| methyltransferase domain protein [Propionibacterium acnes HL030PA2]
gi|327333754|gb|EGE75471.1| methyltransferase domain protein [Propionibacterium acnes HL096PA3]
gi|327444783|gb|EGE91437.1| methyltransferase domain protein [Propionibacterium acnes HL013PA2]
gi|327454329|gb|EGF00984.1| methyltransferase domain protein [Propionibacterium acnes HL087PA3]
gi|327456394|gb|EGF03049.1| methyltransferase domain protein [Propionibacterium acnes HL083PA2]
gi|327457334|gb|EGF03989.1| methyltransferase domain protein [Propionibacterium acnes HL092PA1]
gi|328756089|gb|EGF69705.1| methyltransferase domain protein [Propionibacterium acnes HL087PA1]
gi|328757894|gb|EGF71510.1| methyltransferase domain protein [Propionibacterium acnes HL020PA1]
gi|328758467|gb|EGF72083.1| methyltransferase domain protein [Propionibacterium acnes HL025PA2]
gi|332674473|gb|AEE71289.1| hypothetical protein PAZ_c00780 [Propionibacterium acnes 266]
Length = 289
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 7/85 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V ++ S +D+G G G I + G V +++ S L ++
Sbjct: 76 AAVTEIVEPGSSVLDVGGGTGRFAIPLA-----QRGCRVTVLDRSEDMLSVLESSAEEKD 130
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
V + + D + A
Sbjct: 131 VEIDVVHQ--EWPADLGCQFDSVMA 153
>gi|312793762|ref|YP_004026685.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180902|gb|ADQ41072.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 304
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I +I V ++ +
Sbjct: 161 AIQEYVKPGMDVLDVGTGSG----ILAIAAKKFLAKRVLAVDIDEVAVKVAEENARLNGV 216
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ + E + DV+ A
Sbjct: 217 EIEIKKNDLVEGIE--EKFDVVIA 238
>gi|312622232|ref|YP_004023845.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202699|gb|ADQ46026.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 306
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I +I V ++ +
Sbjct: 161 AIQKYVKPGMDVLDVGTGSG----ILAIAAKKFLARRVLAVDIDEVAVKVAEENARLNGV 216
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ + E + DV+ A
Sbjct: 217 EIEIKKNDLVEGIE--EKFDVVIA 238
>gi|298674852|ref|YP_003726602.1| type 11 methyltransferase [Methanohalobium evestigatum Z-7303]
gi|298287840|gb|ADI73806.1| Methyltransferase type 11 [Methanohalobium evestigatum Z-7303]
Length = 209
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 15/103 (14%)
Query: 53 DFWIRHV------EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ RH + + + + +D+G GGG I + G V+ I+
Sbjct: 24 EMNERHFDLWKWGLEHISI----NPDYLVLDVGCGGGKAIQILADFCP---YGKVHGIDY 76
Query: 107 KNKKASFLRYVVQKTAARGKVFA--CRIQEAPQMITTCDVISA 147
+ S + V + V + P T D+++A
Sbjct: 77 SEEMVSMAQEVNNELVKNNHVEIKYGTVSSIPYSDNTFDLVTA 119
>gi|293609439|ref|ZP_06691741.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827891|gb|EFF86254.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 271
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + + +++ + A + Q + F
Sbjct: 104 LPNTANIVDLGTGTGAIALALASERPDWQVTAIDIYAPTLEVA---KENAQAHDLQRVKF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
AC D+I +
Sbjct: 161 ACGAWFDALEPQKFDLIVS 179
>gi|255524438|ref|ZP_05391394.1| Methyltransferase type 11 [Clostridium carboxidivorans P7]
gi|296187717|ref|ZP_06856111.1| methyltransferase domain protein [Clostridium carboxidivorans P7]
gi|255511874|gb|EET88158.1| Methyltransferase type 11 [Clostridium carboxidivorans P7]
gi|296047674|gb|EFG87114.1| methyltransferase domain protein [Clostridium carboxidivorans P7]
Length = 252
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 9/83 (10%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARG 125
+ +D+G+G GF ++ + + G ++ ++E KKA +
Sbjct: 44 IGKESKKILDVGTGTGFLALLLAELGHNCTGLDISEGMMEVARKKAK-------EAKLNI 96
Query: 126 KVFACRIQEAPQMITTCDVISAR 148
+ P T D++ R
Sbjct: 97 NFGMGDAENLPCKDNTYDIVVNR 119
>gi|224418719|ref|ZP_03656725.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253826751|ref|ZP_04869636.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|313142238|ref|ZP_07804431.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510157|gb|EES88816.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|313131269|gb|EFR48886.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 275
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L +D+G G G I SI + G V ++ + + QK
Sbjct: 135 ALNNLSLANKTLLDVGCGSG----ILSIA-AKKSGAEVWCCDTDEIAVNATKENAQKNNL 189
Query: 124 R-GKVFACRIQEAPQMITTCDVISA 147
KVF I + DV+ A
Sbjct: 190 NLDKVFLGSIDKITDKKDYFDVVIA 214
>gi|163759168|ref|ZP_02166254.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea
phototrophica DFL-43]
gi|162283572|gb|EDQ33857.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea
phototrophica DFL-43]
Length = 423
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 15/103 (14%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQL-SSIEGGLVNLIES 106
+ RH+ +D+G G G G+ + + +E V L E
Sbjct: 154 IEDAQTLKKRHI----AAKLCLKDGQRVLDIGCGWG--GMALYLAHVADVEVVGVTLSE- 206
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQ--EAPQMITTCDVISA 147
++ + R + +V R + + ++ D + +
Sbjct: 207 --RQLAVARRRAEILGVSDRV---RFELIDYREVTEKFDRVVS 244
>gi|167032417|ref|YP_001667648.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas putida GB-1]
gi|166858905|gb|ABY97312.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Pseudomonas putida GB-1]
Length = 302
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI+ + E V L + + +++ +
Sbjct: 121 WLASEPARILDLCTGSGCIGIVAAEVFPEAE---VVLADLSFQALEVANQNIERHGLDTR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFGGLPGQRFDLILS 199
>gi|119182378|ref|XP_001242324.1| hypothetical protein CIMG_06220 [Coccidioides immitis RS]
Length = 515
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 15/110 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE--GGLVNLIESKNKKASFLRYVVQK 120
L + L PS +DLGSG I + E ++L + V
Sbjct: 272 LTLIPLPDSPSRILDLGSGPADWAITIGEEYPDTEVIATDISLFDP---------QSVSI 322
Query: 121 TAARGKVFACRIQEAPQMITTCDVI----SARALADLDTLLEYSFPWLYQ 166
+ D I +RA+++ L + +F L
Sbjct: 323 APPNVYFQIDDAEGKWTFHEPFDFIHVRGLSRAISNWPRLYQQAFDHLKP 372
>gi|327330604|gb|EGE72350.1| hypothetical protein HMPREF9344_01929 [Propionibacterium acnes
HL097PA1]
Length = 408
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 46 VSSSTVEDFWIRHVEDS-----------LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
+S+ D ++ HV DS L L P ++ + S G G +I
Sbjct: 266 ISTRLASDGYVTHVYDSSGTLKGDILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG- 324
Query: 95 SIEGGLVN-LIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADL 153
+E ++ L++ + + + L V+ + F +++A + RA+A+L
Sbjct: 325 RLETTDIDPLVDLRRDRVAGLALVLDSDTFTARRFRSTLEQAEEHE--------RAVAEL 376
Query: 154 DTLLEYS 160
D ++
Sbjct: 377 DD-AGWA 382
>gi|307262508|ref|ZP_07544153.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306867885|gb|EFM99716.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 329
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R+ + + + G V A
Sbjct: 190 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRHTLAENSLEGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSHIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|291485120|dbj|BAI86195.1| hypothetical protein BSNT_03940 [Bacillus subtilis subsp. natto
BEST195]
Length = 180
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+K L T+E I DS+ +++G G G + ++ G
Sbjct: 18 RKYKLT--KTIEHMMI----DSI----DIQENDRILEIGIGNG---TVFKSITKKLKKGS 64
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ I+ +K + +K G+VF ++ P T + + +
Sbjct: 65 LKSIDPSKRKVRQISRANRKNMGNGEVFHGYPEDIPFDDRTFNKVFS 111
>gi|241814081|ref|XP_002416539.1| protein arginine N-methyltransferase PRMT1, putative [Ixodes
scapularis]
gi|215511003|gb|EEC20456.1| protein arginine N-methyltransferase PRMT1, putative [Ixodes
scapularis]
Length = 399
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+G G G I S+ + V IE +V++
Sbjct: 104 NSMYHNKHLFKGKVVLDVGCGTG----ILSMFAAKAGAARVFGIECSG-VVEHAERIVRE 158
Query: 121 TAARGKV--FACRIQEA--PQMITTCDVISA 147
V +++E P+ D+I +
Sbjct: 159 NNLSNIVTIVKGKVEEVTLPEGHEKVDIIIS 189
>gi|170740357|ref|YP_001769012.1| methyltransferase type 11 [Methylobacterium sp. 4-46]
gi|168194631|gb|ACA16578.1| Methyltransferase type 11 [Methylobacterium sp. 4-46]
Length = 251
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 9/103 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+D+G GGF +I++ V ++ + R+ +
Sbjct: 47 AHAIPADLTGKSVLDIGCNGGF----YAIEMKRRGAARVLGLDEDPDYLAQARFAAEALG 102
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
A + + + + D++ + L P L
Sbjct: 103 AEIEFREGSVYDVAALGERFDLVLF-----MGVLYHLRHPLLA 140
>gi|20804044|emb|CAD31621.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A]
Length = 226
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK-KASFLRYVVQKTAARGKVFA 129
+++G G G PG+ + + + + K A+ L + +V
Sbjct: 56 EGKSILEIGCGFGLPGLYLA----KLGAASLVACDIDPKAVANALENAARNGIKNVEVIE 111
Query: 130 CRIQEAPQMITTCDVI 145
I D I
Sbjct: 112 SDIFTNVPPHRKFDFI 127
>gi|88810697|ref|ZP_01125954.1| membrane-associated protein [Nitrococcus mobilis Nb-231]
gi|88792327|gb|EAR23437.1| membrane-associated protein [Nitrococcus mobilis Nb-231]
Length = 210
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 17/98 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G + + I++ A L K ++
Sbjct: 44 SDRVLDIGCGTG---TLLQALRQRYPYIALTGIDAS---AEMLAVAAAKLGPSARLCLAS 97
Query: 132 IQEAPQMITTCDVISA-----------RALADLDTLLE 158
Q P D++ + RA+A++ ++
Sbjct: 98 AQRLPLRGEAFDLVVSTSALHYFRDPARAVAEMRRVVR 135
>gi|47567721|ref|ZP_00238431.1| methlytransferase, ubiE/COQ5 family, putative [Bacillus cereus
G9241]
gi|47555698|gb|EAL14039.1| methlytransferase, ubiE/COQ5 family, putative [Bacillus cereus
G9241]
Length = 261
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG + + + ++L E + A ++++ K +
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFQEV--VALDLTEKMLENAK--KFIISKGHENVSFVSG 96
Query: 131 RIQEAPQMITTCDVISAR 148
++ P + DVI+ R
Sbjct: 97 NAEDLPFSDSYFDVITCR 114
>gi|323698629|ref|ZP_08110541.1| Methyltransferase type 11 [Desulfovibrio sp. ND132]
gi|323458561|gb|EGB14426.1| Methyltransferase type 11 [Desulfovibrio desulfuricans ND132]
Length = 247
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 32/100 (32%), Gaps = 11/100 (11%)
Query: 55 WIRHVEDSL------RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
R D L V L P ++D+G+G G+ +I ++ G V I+ +
Sbjct: 25 LTRKFLDILHAGFVESVVNLAPAQGRFLDVGTGTGW----IAIGVARHSGAQVTGIDLSD 80
Query: 109 KKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISA 147
+ R R F P T D +
Sbjct: 81 DMLAIARMNADNEGVRNVEFVKGNASRIPFDDNTFDAVFC 120
>gi|312962058|ref|ZP_07776555.1| UbiE/COQ5 methyltransferase [Pseudomonas fluorescens WH6]
gi|311283868|gb|EFQ62452.1| UbiE/COQ5 methyltransferase [Pseudomonas fluorescens WH6]
Length = 254
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + +DLG G G + + V + + + Q+
Sbjct: 36 LQAELAGQGSARLLDLGCGAGHVSFHVAPLVKE-----VVAYDLSQQMLDVVAAAAQERG 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ P D + +R
Sbjct: 91 FTNISTVNGAAERLPFADGEFDFVFSR 117
>gi|303228445|ref|ZP_07315278.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella atypica ACS-134-V-Col7a]
gi|303230844|ref|ZP_07317591.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella atypica ACS-049-V-Sch6]
gi|302514604|gb|EFL56599.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella atypica ACS-049-V-Sch6]
gi|302516947|gb|EFL58856.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Veillonella atypica ACS-134-V-Col7a]
Length = 195
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
SI +D+G+G G I ++ G V IE +K + ++K V
Sbjct: 34 IEEDSIVLDVGAGTGSISIEAALAAPK---GHVYAIERFDKGIELIHENMKKFNVNNMTV 90
Query: 128 FACRIQEAPQMITTCDVIS 146
+ E + + D +
Sbjct: 91 IKSKAPEGMEELPELDAVI 109
>gi|228933506|ref|ZP_04096359.1| Methyltransferase type 12 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826235|gb|EEM72015.1| Methyltransferase type 12 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 292
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 40/127 (31%), Gaps = 12/127 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
W+ K L D + S V P +D G G G+ G+I L
Sbjct: 5 DWNSK--LTYLKNTRDLYYNDDYVSFLVNTVWRITKPVHIVDYGCGYGYLGLILMPLLP- 61
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+G I+S + R + + + E ++ T D+ A
Sbjct: 62 -KGSKYTGIDSGGTLLAEARELFRLLPYETQFLEGDATEI-ELNDTYDIAICHAF----- 114
Query: 156 LLEYSFP 162
LL S P
Sbjct: 115 LLHMSSP 121
>gi|206971291|ref|ZP_03232242.1| putative biotin synthesis protein BioC [Bacillus cereus AH1134]
gi|206734063|gb|EDZ51234.1| putative biotin synthesis protein BioC [Bacillus cereus AH1134]
Length = 269
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S V+ ES + + + F C
Sbjct: 47 RILELGCGTGYVTEQLSKLFPKAHITAVDFAESM------IAIAQTRQNVKNVTFHCEDI 100
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 101 EQLRLEESYDVIISNA 116
>gi|147677215|ref|YP_001211430.1| ribosomal protein L11 methyltransferase [Pelotomaculum
thermopropionicum SI]
gi|189037699|sp|A5D3Y3|PRMA_PELTS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|146273312|dbj|BAF59061.1| ribosomal protein L11 methylase [Pelotomaculum thermopropionicum
SI]
Length = 308
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 62 SLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
LR+ + D+G+G G + ++ + + G V ++ ++
Sbjct: 160 CLRLLEKYVRPGGTVYDVGTGSG----VLAVAAARLGAGRVVAVDIDPLACRVAAGNAER 215
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
GKV + ++ D++ A
Sbjct: 216 NGVAGKVQVVQGNLLEKVEGRADLVVA 242
>gi|104783809|ref|YP_610307.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Pseudomonas
entomophila L48]
gi|95112796|emb|CAK17524.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Pseudomonas
entomophila L48]
Length = 403
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P PS + D+G+G G GI S IE+ + F+ +
Sbjct: 239 ITLARLAPQPSELLWDVGAGCGSIGIEWMRAHPSCRTLA---IEADEGRQGFIEHNRDTL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ + +A + D I
Sbjct: 296 GVPGLQLIRGKAPDALTGLERPDAI 320
>gi|39998193|ref|NP_954144.1| HemK family modification methylase [Geobacter sulfurreducens PCA]
gi|39985139|gb|AAR36494.1| modification methylase, HemK family [Geobacter sulfurreducens PCA]
gi|298507131|gb|ADI85854.1| peptide chain release factor methyltransferase [Geobacter
sulfurreducens KN400]
Length = 284
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P+ + +D+G G G + + QL + V +E + + ++ AR
Sbjct: 111 ALRRAPHAAAVLDIGVGSGCIAVALAKQLPHAQ---VVGVEQSPGAIALAQRNAERHGAR 167
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+F + E P D+I +
Sbjct: 168 VTLFEGSLFE-PLGDQRFDLIVS 189
>gi|30262194|ref|NP_844571.1| hypothetical protein BA_2178 [Bacillus anthracis str. Ames]
gi|47527471|ref|YP_018820.1| hypothetical protein GBAA_2178 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185035|ref|YP_028287.1| hypothetical protein BAS2024 [Bacillus anthracis str. Sterne]
gi|165872249|ref|ZP_02216887.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167632941|ref|ZP_02391267.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167641063|ref|ZP_02399319.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170686504|ref|ZP_02877725.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170708415|ref|ZP_02898858.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177650898|ref|ZP_02933795.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190567935|ref|ZP_03020846.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|196033997|ref|ZP_03101408.1| conserved hypothetical protein [Bacillus cereus W]
gi|227815006|ref|YP_002815015.1| hypothetical protein BAMEG_2417 [Bacillus anthracis str. CDC 684]
gi|228945804|ref|ZP_04108150.1| Methyltransferase type 12 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229121746|ref|ZP_04250967.1| Methyltransferase type 12 [Bacillus cereus 95/8201]
gi|229601825|ref|YP_002866547.1| hypothetical protein BAA_2240 [Bacillus anthracis str. A0248]
gi|254684762|ref|ZP_05148622.1| hypothetical protein BantC_13035 [Bacillus anthracis str.
CNEVA-9066]
gi|254721055|ref|ZP_05182846.1| hypothetical protein BantA1_01200 [Bacillus anthracis str. A1055]
gi|254737209|ref|ZP_05194913.1| hypothetical protein BantWNA_18804 [Bacillus anthracis str. Western
North America USA6153]
gi|254743606|ref|ZP_05201291.1| hypothetical protein BantKB_21802 [Bacillus anthracis str. Kruger
B]
gi|254751524|ref|ZP_05203561.1| hypothetical protein BantV_03606 [Bacillus anthracis str. Vollum]
gi|254759039|ref|ZP_05211066.1| hypothetical protein BantA9_12096 [Bacillus anthracis str.
Australia 94]
gi|301053708|ref|YP_003791919.1| methyltransferase [Bacillus anthracis CI]
gi|30256820|gb|AAP26057.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47502619|gb|AAT31295.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178962|gb|AAT54338.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164712042|gb|EDR17581.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167510961|gb|EDR86351.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167531753|gb|EDR94418.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170126654|gb|EDS95538.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170669580|gb|EDT20322.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172083359|gb|EDT68420.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190560990|gb|EDV14964.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|195993677|gb|EDX57634.1| conserved hypothetical protein [Bacillus cereus W]
gi|227004675|gb|ACP14418.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|228661662|gb|EEL17281.1| Methyltransferase type 12 [Bacillus cereus 95/8201]
gi|228813869|gb|EEM60144.1| Methyltransferase type 12 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229266233|gb|ACQ47870.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
gi|300375877|gb|ADK04781.1| conserved hypothetical methyltransferase [Bacillus cereus biovar
anthracis str. CI]
Length = 292
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 40/127 (31%), Gaps = 12/127 (9%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
W+ K L D + S V P +D G G G+ G+I L
Sbjct: 5 DWNSK--LTYLKNTRDLYYNDDYVSFLVNTVWRITKPVHIVDYGCGYGYLGLILMPLLP- 61
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDT 155
+G I+S + R + + + E ++ T D+ A
Sbjct: 62 -KGSKYTGIDSGGTLLAEARELFRLLPYETQFLEGDATEI-ELNDTYDIAICHAF----- 114
Query: 156 LLEYSFP 162
LL S P
Sbjct: 115 LLHMSSP 121
>gi|148546008|ref|YP_001266110.1| HemK family modification methylase [Pseudomonas putida F1]
gi|148510066|gb|ABQ76926.1| modification methylase, HemK family [Pseudomonas putida F1]
Length = 276
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+L P P+ +DLG+G G + + + + + V ++ + A+ Q+
Sbjct: 100 TALELQPASPAKVLDLGTGTGAIALALASERPAWQ---VTAVDRVEEAAALAERNRQRLG 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
D+I +
Sbjct: 157 LANARVRLSHWFDSLAGERFDLIVS 181
>gi|330993926|ref|ZP_08317856.1| Chaperone surA [Gluconacetobacter sp. SXCC-1]
gi|329758872|gb|EGG75386.1| Chaperone surA [Gluconacetobacter sp. SXCC-1]
Length = 462
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 52/143 (36%), Gaps = 16/143 (11%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEKLE-YFYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
+ D+ L A L + +VS + +++L + ++ ++ RH+
Sbjct: 79 RDVDTRGRLFA--LSSGLDVSDDVMQRLRPQIVRQLIDEKLRM--------QEMLDRHIN 128
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ + G P +L+ L LI+ + + + + Q+
Sbjct: 129 -----VPIQQIADAIAGIEQRNGMPQNALRNKLAEDGVSLTTLIDQIRVQLGWTQVLRQE 183
Query: 121 TAARGKVFACRIQEAPQMITTCD 143
T RG++ A I++ + + D
Sbjct: 184 TGERGRITAADIEQRTEALKRED 206
>gi|313497100|gb|ADR58466.1| HemK family modification methylase [Pseudomonas putida BIRD-1]
Length = 276
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+L P P+ +DLG+G G + + + + + V ++ + A+ Q+
Sbjct: 100 TALELQPASPAKVLDLGTGTGAIALALASERPAWQ---VTAVDRVEEAAALAERNRQRLG 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
D+I +
Sbjct: 157 LANARVRLSHWFDSLAGERFDLIVS 181
>gi|172037116|ref|YP_001803617.1| hypothetical protein cce_2201 [Cyanothece sp. ATCC 51142]
gi|171698570|gb|ACB51551.1| hypothetical protein cce_2201 [Cyanothece sp. ATCC 51142]
Length = 370
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P +D+G G + + E ++L S + + R +
Sbjct: 186 NPQKILDMGCSVGHSTLPYAQAYPEAEVWGIDLGASLLR---YARARANGLGQKVYFAQQ 242
Query: 131 RIQEAPQMITTCDVISA 147
++ D++ +
Sbjct: 243 NAEQTDFEDNRFDLVVS 259
>gi|186477753|ref|YP_001859223.1| type 11 methyltransferase [Burkholderia phymatum STM815]
gi|184194212|gb|ACC72177.1| Methyltransferase type 11 [Burkholderia phymatum STM815]
Length = 429
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 12/85 (14%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
ID+G G G + +G V ++S R + A ++ ++
Sbjct: 65 IIDIGVGTGRAALPLV-----ADGYDVMGVDSSQAMLDETRRLAN--GAPIRLQVGDVER 117
Query: 135 APQMITTCDVISARALADLDTLLEY 159
P + D + L+ L+ +
Sbjct: 118 LPCGDASFDCAVS-----LNVLVHF 137
>gi|111223782|ref|YP_714576.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Frankia alni ACN14a]
gi|111151314|emb|CAJ63027.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Frankia alni ACN14a]
Length = 222
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 32 FYFL-FLKWSKKI--NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ L W++ + NL ++ H+ + L +++GSG G G+
Sbjct: 78 YADLPLDAWTQVLATNLTAT---------HLV-TQGALPLLGESGSVVNIGSGAGVVGVP 127
Query: 89 TSIQLSSIEGGLVNLIESKNK 109
++ + GL+ L S +K
Sbjct: 128 LRAHYTAAKTGLIGLTRSLSK 148
>gi|298706624|emb|CBJ29562.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 514
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G + +I + V +E + A R +V+K
Sbjct: 188 NSMLLNRDAFEGKTVLDVGSGSG----VLAIFAAQAGAKKVYAVEYTDM-AKHARTMVEK 242
Query: 121 TAARGK--VFACRIQEAPQMITTCDVISA 147
V + Q+ DVI +
Sbjct: 243 NGFGDVIQVIQGSAESI-QLPEKVDVIVS 270
>gi|255639594|gb|ACU20091.1| unknown [Glycine max]
Length = 291
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 21/128 (16%)
Query: 42 KINLVSSSTVEDFWIRHVE-DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+N + + RH + D L ID+G GGG + G
Sbjct: 74 VMNPTRLAFIRSALCRHFKKDPYNAKPL--EGLKIIDVGCGGGILSEPLARL-----GAT 126
Query: 101 VNLIESKNK--KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTL-- 156
V +++ K K + L + + + ++ + T D A+ L+ +
Sbjct: 127 VTGVDAVEKNIKIAQLHAGLDPATSSIEFCCTTAEKLVEEGRTFD-----AVMALEVIEH 181
Query: 157 ----LEYS 160
E+
Sbjct: 182 VADPAEFC 189
>gi|229010846|ref|ZP_04168043.1| Methyltransferase, UbiE/COQ5 [Bacillus mycoides DSM 2048]
gi|228750520|gb|EEM00349.1| Methyltransferase, UbiE/COQ5 [Bacillus mycoides DSM 2048]
Length = 258
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
ID+G GGG ++ + V ++ F + ++Q F
Sbjct: 34 QNKQVIDIGCGGGIYTKELALMGAK----SVVGLD-------FSKEILQAAKENCNAFPN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
T D++ +RA+
Sbjct: 83 ISFIHGDAHNISFPNETFDLVISRAV 108
>gi|218437906|ref|YP_002376235.1| methyltransferase type 11 [Cyanothece sp. PCC 7424]
gi|218170634|gb|ACK69367.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424]
Length = 247
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 7/90 (7%)
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS +L +DLG GGGF + V ++ K F +
Sbjct: 24 IDSYTFLKLVGNVENKSLLDLGCGGGF----YTRIFREQGANPVVGVDISEKMLEFAQEK 79
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + E Q I D++ +
Sbjct: 80 EAQHPLGIQYLLKDVTELEQ-IGHFDLVIS 108
>gi|251799654|ref|YP_003014385.1| methyltransferase small [Paenibacillus sp. JDR-2]
gi|247547280|gb|ACT04299.1| methyltransferase small [Paenibacillus sp. JDR-2]
Length = 201
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D+L + + +D+G G G G+ + G V +I+ + +
Sbjct: 49 LLDALVLAP----SAQVLDVGCGYGPIGLTAAKLAPE---GHVTMIDINERAVELSKENA 101
Query: 119 QKTAARG-KVFACRIQEAPQMITTCDVI 145
+ + I E+ + DVI
Sbjct: 102 KLNGVSNVTIVQSDIYESVKN-NRYDVI 128
>gi|168334101|ref|ZP_02692314.1| Methyltransferase type 11 [Epulopiscium sp. 'N.t. morphotype B']
Length = 248
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 11/100 (11%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES---K 107
++ + H +++ S +D+G+G G +I + +++ E+
Sbjct: 31 IDAVLLAHFVSGIKI------DSKILDIGTGTGIIPLILYAIHKKGKFVGIDIQEAMVEM 84
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L V + + Q+ + D+I +
Sbjct: 85 ASRTMMLNQVSNEIEIKCLDIKNFGQDFK--RGSFDIIVS 122
>gi|325688037|gb|EGD30056.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK72]
Length = 189
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 12/109 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +LH +D+GSG G I + +E V +E + + +Q
Sbjct: 22 SLDKLELH-RAKRMLDVGSGTGSVTIQAARTYPELE---VVAVERNEDAVALTQENIQHF 77
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL----ADLDTLLEYSFPWLYQ 166
F + ++ + D I + ++ + ++ +
Sbjct: 78 GCHNVRFHQGLAPI-ELEGSFDAIF---VGGTGGNMQEIFDWCAQLMEP 122
>gi|302384716|ref|YP_003820538.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1]
gi|302195344|gb|ADL02915.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1]
Length = 241
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 38/136 (27%), Gaps = 17/136 (12%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY 71
++L NV E + F +++ + + H+ D
Sbjct: 20 KDWLDGVKNVPVEEMANF--FANRISEYNNVH----LKNWGEEYA-HIAD-----FFDDG 67
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G + + ++L ES K LR ++
Sbjct: 68 LKTLLDIGCGTGLELESMYKRFPEVRVTGIDLSESMLDK---LRENYGDKNI--EIINAD 122
Query: 132 IQEAPQMITTCDVISA 147
E P D +
Sbjct: 123 YFEYPFEENKFDAAMS 138
>gi|229166384|ref|ZP_04294141.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH621]
gi|228617126|gb|EEK74194.1| Methyltransferase, UbiE/COQ5 [Bacillus cereus AH621]
Length = 258
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 17/86 (19%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-- 128
ID+G GGG ++ + V ++ F + ++Q F
Sbjct: 34 QNKQVIDIGCGGGIYTKELALMGAK----NVVGLD-------FSKEILQAAKENCNAFPN 82
Query: 129 ----ACRIQEAPQMITTCDVISARAL 150
T D++ +RA+
Sbjct: 83 ISFIHGDAHNISFPNETFDLVISRAV 108
>gi|219871368|ref|YP_002475743.1| tellurite resistance protein TehB [Haemophilus parasuis SH0165]
gi|219691572|gb|ACL32795.1| tellurite resistance protein TehB [Haemophilus parasuis SH0165]
Length = 287
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 47/127 (37%), Gaps = 16/127 (12%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S + +L ++ ++KK NL ++ + V +++ +DLG
Sbjct: 80 LSEDLACQLAFYCSPEDYFAKKYNLTATHSE-------VLNAINYLS----TGKVLDLGC 128
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G G + +++G V ++ + FL +++K A+ +
Sbjct: 129 GRGRNALYL-----NLKGFDVTAVDQNEESIHFLNSIIEKEDAQHIQTGIYDINQANIQG 183
Query: 141 TCDVISA 147
D I +
Sbjct: 184 EFDFIVS 190
>gi|330810798|ref|YP_004355260.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327378906|gb|AEA70256.1| putative methyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 254
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 22/87 (25%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + +DLG G G + G V + + + +
Sbjct: 36 LQAALAGRGDARVLDLGCGAGHVSFHVAPL-----AGEVVAYDLSQQMLDVVATAAAERG 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ P D + +R
Sbjct: 91 LGNISTVCGAAERLPFADAEFDFVFSR 117
>gi|322435415|ref|YP_004217627.1| Methyltransferase type 11 [Acidobacterium sp. MP5ACTX9]
gi|321163142|gb|ADW68847.1| Methyltransferase type 11 [Acidobacterium sp. MP5ACTX9]
Length = 234
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 14/128 (10%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S E+ +FY L ++ L +R SL + + ++LG G
Sbjct: 17 SDSLFERCSWFYALCREY-----L--FRDHTQEIVR----SLFPVEPPAPGTKLLELGCG 65
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
GF S +L +++ V+L + ++A+ + + P +
Sbjct: 66 PGFYACRLSEELPTLQTTGVDLSVALIERAT--SRAKSRQLSNCSFQHADAHSLPYPSHS 123
Query: 142 CD-VISAR 148
D V+ +R
Sbjct: 124 IDAVVVSR 131
>gi|297627230|ref|YP_003688993.1| methyltransferase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922995|emb|CBL57577.1| Methyltransferase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 272
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA- 123
+ L +D+GSG G + ++ G V +E ++ + R ++
Sbjct: 35 LLPLLRGGMSLLDVGSGAGTITADLAALVA---PGHVTALEVTDEAVAVTRAGLEAAGTG 91
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+V + + P + D +
Sbjct: 92 TVEVRRGDVADLPFDDDSFDAV 113
>gi|282165673|ref|YP_003358058.1| tRNA methyltransferase [Methanocella paludicola SANAE]
gi|282157987|dbj|BAI63075.1| tRNA methyltransferase [Methanocella paludicola SANAE]
Length = 241
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D G+G G + ++ L +I V ES + A+ + V+ +V
Sbjct: 88 SDTVLDAGTGSG----VLAVYLGTI-AKKVVTYESNEQFANNAKKNVELAGLGNVEVRHG 142
Query: 131 RI-QEAPQMITTCDVIS 146
I +E ++ D ++
Sbjct: 143 DILEEIGRLEGPFDAVT 159
>gi|237744128|ref|ZP_04574609.1| methyltransferase [Fusobacterium sp. 7_1]
gi|229431357|gb|EEO41569.1| methyltransferase [Fusobacterium sp. 7_1]
Length = 370
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ V I+ K
Sbjct: 174 CIQLMREVEEPN-ILDIGSGSGAISIAIA---NELKSSSVTGIDINEKAIELAIENKTLN 229
Query: 122 AARGKVFAC-RIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 230 KIENVNFIESNLFEKLDKDFKYDLIVS 256
>gi|296129408|ref|YP_003636658.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
gi|296021223|gb|ADG74459.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
Length = 205
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR P +DLG G G + ++ V ++ + +R +
Sbjct: 57 LRTVPAPPATGDLLDLGCGWGPVALTLALLSPDAR---VWAVDVNERALDLVRRNAARLG 113
Query: 123 ARGKVFA 129
V A
Sbjct: 114 LGNVVAA 120
>gi|184157300|ref|YP_001845639.1| N6-adenine-specific methylase [Acinetobacter baumannii ACICU]
gi|332873427|ref|ZP_08441380.1| RNA methyltransferase, RsmD family [Acinetobacter baumannii
6014059]
gi|183208894|gb|ACC56292.1| N6-adenine-specific methylase [Acinetobacter baumannii ACICU]
gi|322507186|gb|ADX02640.1| N6-adenine-specific methylase [Acinetobacter baumannii 1656-2]
gi|323517164|gb|ADX91545.1| N6-adenine-specific methylase [Acinetobacter baumannii TCDC-AB0715]
gi|332738373|gb|EGJ69247.1| RNA methyltransferase, RsmD family [Acinetobacter baumannii
6014059]
Length = 183
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S V +IE +A FL+ +Q A+ +
Sbjct: 45 QKAHVLDICTGSGALGFEAL----SRGAASVYMIEPDKTQARFLKDNIQLLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|15837998|ref|NP_298686.1| hypothetical protein XF1397 [Xylella fastidiosa 9a5c]
gi|9106407|gb|AAF84206.1|AE003971_5 hypothetical protein XF_1397 [Xylella fastidiosa 9a5c]
Length = 303
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 29/92 (31%), Gaps = 11/92 (11%)
Query: 58 HVEDSL--RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV SL V P + IDLG G G + G V I+ + +
Sbjct: 64 HV--SLREAVAAELPVGARLIDLGCGTGLDAQAFA-----QRGYRVMAIDGASAMVAPAH 116
Query: 116 YVVQKTAARGK--VFACRIQEAPQMITTCDVI 145
Q + V IQ Q+ D I
Sbjct: 117 QRAQAVGLEARLQVVPVGIQHIDQLRGEFDGI 148
>gi|51246934|ref|YP_066818.1| hypothetical protein DP3082 [Desulfotalea psychrophila LSv54]
gi|50877971|emb|CAG37811.1| unknown protein [Desulfotalea psychrophila LSv54]
Length = 265
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 12/100 (12%)
Query: 54 FWIRHVEDSLRVFQLH------PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
FWIR + D+ V P ++LG+G G PG+ + G V + + +
Sbjct: 96 FWIR-LWDAAIVLSYLLTSLPQPQGKTLLELGAGLGAPGLAAASA-----GMDVTITDYE 149
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
F R + FA AP + D+++A
Sbjct: 150 EMIVDFQRVSAAASGLTNVNFALFDWFAPPELKQYDILAA 189
>gi|227548001|ref|ZP_03978050.1| possible site-specific DNA-methyltransferase (adenine-specific)
[Corynebacterium lipophiloflavum DSM 44291]
gi|227079907|gb|EEI17870.1| possible site-specific DNA-methyltransferase (adenine-specific)
[Corynebacterium lipophiloflavum DSM 44291]
Length = 283
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 74 IWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +DLG+G G +I ++ ++ V +E+ + R ++ V A +
Sbjct: 115 VVVDLGTGSG----ALAIYIAHALDDARVTAVEASATARRYARGNAERLGVDVTVIAGDM 170
Query: 133 QE---APQMITTCDVISA 147
+ QM D++ +
Sbjct: 171 TDPQLLDQMRGQVDLVVS 188
>gi|118088772|ref|XP_419824.2| PREDICTED: hypothetical protein [Gallus gallus]
Length = 343
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 11/102 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG +S+ G ++ +E + A + A R +
Sbjct: 129 GVKILDVGCGGGLLSEPLGRLGASVTG--IDPLEENIRAADQHKSFDPVLAKRIQYKCGS 186
Query: 132 IQE-APQMITTCDVISARA------LADLDTLLEYSFPWLYQ 166
++E + + T DVI A +ADL+ ++ L
Sbjct: 187 LEEIVEESVETFDVIV--ASEVVEHVADLEMFIKCCSQVLKP 226
>gi|71909548|ref|YP_287135.1| ribosomal protein L11 methyltransferase [Dechloromonas aromatica
RCB]
gi|123626321|sp|Q478R6|PRMA_DECAR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|71849169|gb|AAZ48665.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
[Dechloromonas aromatica RCB]
Length = 296
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 8/77 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D G G G I +I + + G V ++ + + A R V A
Sbjct: 164 EACTVLDYGCGSG----ILAIAAARLGAGHVAGVDIDPQAV----EAARANAERNGVTAL 215
Query: 131 RIQEAPQMITTCDVISA 147
A + DV+ A
Sbjct: 216 FADSATPVAGEYDVVVA 232
>gi|312078517|ref|XP_003141773.1| hypothetical protein LOAG_06189 [Loa loa]
gi|307763064|gb|EFO22298.1| hypothetical protein LOAG_06189 [Loa loa]
Length = 282
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 37/127 (29%), Gaps = 22/127 (17%)
Query: 53 DFWIRHVE---------DSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
+ W R + D + L SI + G+G G +I ++
Sbjct: 95 EMWTRALLRRTQIIYTPDCALILMLLDVKPGSIVCECGTGSGSLSHALAIAIAPTGHLYT 154
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACR-IQEAPQMITTCDVISARALADLDTLLEYS 160
+ IE K L + I++ + CD + L+
Sbjct: 155 HDIEEPRVKQVELEMMKHGLGEITTCVHQNVIEDGFSVENVCDAV----------FLDLP 204
Query: 161 FPWLYQK 167
PW+ K
Sbjct: 205 APWVAIK 211
>gi|300120072|emb|CBK19626.2| unnamed protein product [Blastocystis hominis]
Length = 328
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVF 128
+ +D+G+G G I S+ + V +E + R +V++ KV
Sbjct: 50 EGKVVLDVGTGSG----ILSLFAAQAGAKKVYAVECSGM-VRYARRLVKENGYDEIIKVI 104
Query: 129 ACRIQEAPQMITTCDVISA 147
+++E ++ DVI +
Sbjct: 105 LGKVEEV-ELPEKVDVIIS 122
>gi|254560790|ref|YP_003067885.1| ubiE/COQ5 methyltransferase family enzyme [Methylobacterium
extorquens DM4]
gi|254268068|emb|CAX23940.1| putative ubiE/COQ5 methyltransferase family enzyme
[Methylobacterium extorquens DM4]
Length = 269
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 8/96 (8%)
Query: 55 WIRHVEDSL--RVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
R + DS+ V +L P P +DL +G G+ + + G V +
Sbjct: 26 ISRGIADSIEHCVLRLDPKPGERVLDLATGTGWTSRVVA-----RRGAQVTGADISADLL 80
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
SF + + P D I +
Sbjct: 81 SFAAEQARAEGLGIDYQLGDAERLPFADGAFDAIIS 116
>gi|218661433|ref|ZP_03517363.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli IE4771]
Length = 248
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + G V + K + + A +
Sbjct: 67 RVLDIGCGGGLLSEPVARM-----GASVVGADPSEKNIGIASTHAKASGVSVDYRAVTAE 121
Query: 134 EAPQMITTCDVI 145
E T D++
Sbjct: 122 ELAGAGETFDIV 133
>gi|167763063|ref|ZP_02435190.1| hypothetical protein BACSTE_01429 [Bacteroides stercoris ATCC
43183]
gi|167699403|gb|EDS15982.1| hypothetical protein BACSTE_01429 [Bacteroides stercoris ATCC
43183]
Length = 236
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +D+G+G G + + + ++ +E A+ + +Q +
Sbjct: 29 LGAWAPVQDVKRILDVGAGSGLISLQLAQRNPE---AVITSVEIDPAAAAQAQENIQSSP 85
Query: 123 ARGK--VFACRIQEAPQMITTCDVISA 147
+ V C D+I +
Sbjct: 86 WSNRMEVVCCDF-RKYHPEDKFDLIVS 111
>gi|332637824|ref|ZP_08416687.1| cyclopropane-fatty-acyl-phospholipid synthase [Weissella cibaria
KACC 11862]
Length = 397
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+GSG G IIT+ Q ++ V L E + + +
Sbjct: 156 VHHILDKL----HAEPGKKLLDIGSGWGT-LIITAAQEYGLDAYGVTLSEE---QYALTQ 207
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V++ KV + D I++
Sbjct: 208 ERVKELGLEDKVHVMLMDYRDIKDMQFDYITS 239
>gi|237738184|ref|ZP_04568665.1| caffeoyl-CoA O-methyltransferase [Fusobacterium mortiferum ATCC
9817]
gi|229420064|gb|EEO35111.1| caffeoyl-CoA O-methyltransferase [Fusobacterium mortiferum ATCC
9817]
Length = 218
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FAC 130
+++G+ G+ GI+ + ++ GG + IE ++ + + +K+ V
Sbjct: 56 KNILEVGTAIGYSGILMAKEI-EKNGGKLYTIEIDEERYNLAQENFKKSGLNNIVSIKGD 114
Query: 131 RIQEAPQMITTCDVI 145
++E ++ D +
Sbjct: 115 AVEEIKKIDEKFDFV 129
>gi|229000114|ref|ZP_04159684.1| Protein hemK [Bacillus mycoides Rock3-17]
gi|229007634|ref|ZP_04165228.1| Protein hemK [Bacillus mycoides Rock1-4]
gi|228753645|gb|EEM03089.1| Protein hemK [Bacillus mycoides Rock1-4]
gi|228759651|gb|EEM08627.1| Protein hemK [Bacillus mycoides Rock3-17]
Length = 283
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 24/81 (29%), Gaps = 4/81 (4%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
D+G+G G I ++ + + ++ + + + A
Sbjct: 110 FGKQELHIADIGTGSGAISITLAL---ENQNLRMYTVDIAQESIEVAKENAKALGANVTF 166
Query: 128 FACR-IQEAPQMITTCDVISA 147
+ + + DV+ +
Sbjct: 167 YHGDLLSPFYETGQKLDVVVS 187
>gi|229075823|ref|ZP_04208800.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock4-18]
gi|228707375|gb|EEL59571.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock4-18]
Length = 257
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S ++ ES + + + F C
Sbjct: 35 RILELGCGTGYVTEKLSNLFPKAHITAIDFAESM------IAVAKTRQNVKNVTFHCEDI 88
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 89 ERLRLEESYDVIISNA 104
>gi|145630900|ref|ZP_01786677.1| hypothetical protein CGSHi22421_02861 [Haemophilus influenzae
R3021]
gi|144983560|gb|EDJ91028.1| hypothetical protein CGSHi22421_02861 [Haemophilus influenzae
R3021]
Length = 265
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G G G + + +G V ++ N L QK F
Sbjct: 60 DETVLDIGCGPGTFAVPLA-----QQGSTVYALDYSNGMLDCLAQFKQKLGLHHLTTFHK 114
Query: 131 RIQEAPQMITTCDVISA 147
+ + DV+ A
Sbjct: 115 SWADNWDDVPQADVVLA 131
>gi|20093502|ref|NP_613349.1| RNA methylase [Methanopyrus kandleri AV19]
gi|19886334|gb|AAM01279.1| Predicted RNA methylase [Methanopyrus kandleri AV19]
Length = 204
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + S +DLG+G G GI ++ + V +E +K R V++
Sbjct: 38 SIADREFGLECSRVLDLGAGTGRIGIGAALAGA----CEVTCVEVDSKAVEVARRNVKRA 93
Query: 122 AARGKVFACRIQ-EAPQMITTCDV 144
+V + DV
Sbjct: 94 GVEDRVEVVEADVRDFEPEDQYDV 117
>gi|329964683|ref|ZP_08301737.1| protein-(glutamine-N5) methyltransferase [Bacteroides fluxus YIT
12057]
gi|328525083|gb|EGF52135.1| protein-(glutamine-N5) methyltransferase [Bacteroides fluxus YIT
12057]
Length = 247
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 6/84 (7%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA--A 123
+ P + +D+G+G G + S L ++ E A +Q + A
Sbjct: 73 LKEIPAEARILDVGTGSGCIAVSLSKGLPDARVVAWDVSEEALAIARGNNEALQASVRFA 132
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
V CR P DVI +
Sbjct: 133 LCNVLTCR----PSREDRYDVIVS 152
>gi|20092462|ref|NP_618537.1| hypothetical protein MA3662 [Methanosarcina acetivorans C2A]
gi|19917723|gb|AAM07017.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 306
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 7/82 (8%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TAARG 125
P S +D+G G G I + +G V L + +K + ++ G
Sbjct: 74 YLPKKSRILDVGGGPGRYSIYLA-----SQGHNVTLFDLSSKNILLAKAKAEEQGVHLEG 128
Query: 126 KVFACRIQEAPQMITTCDVISA 147
+ ++ D I
Sbjct: 129 FIHGNALELDHHTKGRFDAILC 150
>gi|15598711|ref|NP_252205.1| hypothetical protein PA3515 [Pseudomonas aeruginosa PAO1]
gi|116051514|ref|YP_789650.1| hypothetical protein PA14_18860 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890258|ref|YP_002439122.1| hypothetical protein PLES_15181 [Pseudomonas aeruginosa LESB58]
gi|254236441|ref|ZP_04929764.1| hypothetical protein PACG_02426 [Pseudomonas aeruginosa C3719]
gi|254242177|ref|ZP_04935499.1| hypothetical protein PA2G_02909 [Pseudomonas aeruginosa 2192]
gi|296387982|ref|ZP_06877457.1| hypothetical protein PaerPAb_07499 [Pseudomonas aeruginosa PAb1]
gi|313108861|ref|ZP_07794844.1| hypothetical protein PA39016_001560005 [Pseudomonas aeruginosa
39016]
gi|9949663|gb|AAG06903.1|AE004772_1 hypothetical protein PA3515 [Pseudomonas aeruginosa PAO1]
gi|115586735|gb|ABJ12750.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168372|gb|EAZ53883.1| hypothetical protein PACG_02426 [Pseudomonas aeruginosa C3719]
gi|126195555|gb|EAZ59618.1| hypothetical protein PA2G_02909 [Pseudomonas aeruginosa 2192]
gi|218770481|emb|CAW26246.1| hypothetical protein PLES_15181 [Pseudomonas aeruginosa LESB58]
gi|310881346|gb|EFQ39940.1| hypothetical protein PA39016_001560005 [Pseudomonas aeruginosa
39016]
Length = 357
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 25/98 (25%), Gaps = 9/98 (9%)
Query: 55 WIRHVE-----DSL-RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
W +H SL V + +D G G G I+ + + V +
Sbjct: 154 WYKHFLVQHWIPSLDGVKEKLQAGGSVLDFGCGSGLAAIMMAKAFPEAQ---VYGCDFHA 210
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
R + +V D ++
Sbjct: 211 PSIERARANAEAAGVGDRVRFEVSDSDALAGKKFDFVT 248
>gi|312876839|ref|ZP_07736816.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796354|gb|EFR12706.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 304
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I +I V ++ +
Sbjct: 161 AIQEYVKPGMDVLDVGTGSG----ILAIAAKKFLAKRVLAVDIDEVAVKVAEENARLNGV 216
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ + E + DV+ A
Sbjct: 217 EIEIKKNDLVEGIE--EKFDVVIA 238
>gi|271970308|ref|YP_003344504.1| ubiquinone/menaquinone biosynthesis methylase-like protein
[Streptosporangium roseum DSM 43021]
gi|270513483|gb|ACZ91761.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
protein [Streptosporangium roseum DSM 43021]
Length = 243
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 10/80 (12%)
Query: 71 YPSIWIDLGSGGGF--PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +D+G G G+ P + + +L+E ++ L V +V
Sbjct: 56 DGATVLDIGCGSGYHLPSLSATAARVIGVEPHGDLVELARRRCRPLPDV--------EVH 107
Query: 129 ACRIQEAPQMITTCDVISAR 148
A Q P + DV AR
Sbjct: 108 AATAQALPLPDASVDVAVAR 127
>gi|255280358|ref|ZP_05344913.1| putative N-6 adenine-specific DNA methylase [Bryantella
formatexigens DSM 14469]
gi|255268823|gb|EET62028.1| putative N-6 adenine-specific DNA methylase [Bryantella
formatexigens DSM 14469]
Length = 245
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VF 128
+DLG+G G I + + G +E + + A R V+ + +
Sbjct: 45 ERERVLDLGTGTGI--IPI-LLEAKTPGEHFTGLEIQKRSADMARRSVELNGLSDRISIV 101
Query: 129 ACRIQEAPQM--ITTCDVISA 147
I+EA + + DV+++
Sbjct: 102 EGDIKEAVSIFGRASFDVVTS 122
>gi|289582050|ref|YP_003480516.1| methyltransferase type 12 [Natrialba magadii ATCC 43099]
gi|289531603|gb|ADD05954.1| Methyltransferase type 12 [Natrialba magadii ATCC 43099]
Length = 537
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 17/114 (14%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D L L +D+G+G G P + L + +E A L ++
Sbjct: 150 LDDLAERGLLDRTLRVLDVGAGVGGPALGLCDYLPDDALVEYHAVEPSA-AADVLESLLA 208
Query: 120 KTA--ARGKVFACRIQEAPQM---------ITTCDVISARALADLDTLLEYSFP 162
+T + I+ D+I A + L E + P
Sbjct: 209 ETGQNIHTTIHREAIEAVEPAALSTTAQGGDEPFDLILA-----CNVLNELADP 257
>gi|149918556|ref|ZP_01907045.1| ribosomal protein L11 methyltransferase [Plesiocystis pacifica
SIR-1]
gi|149820632|gb|EDM80044.1| ribosomal protein L11 methyltransferase [Plesiocystis pacifica
SIR-1]
Length = 342
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 15/103 (14%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA- 129
P +DLG G G G+ + G + + + S + +V A
Sbjct: 190 QPRRVLDLGCGSGILGLSALRLRPDLGGLQLTDHDPEAVDTSRENAALNGLGEDARVVAQ 249
Query: 130 ------CRIQEAPQMITTCDVISA--R------ALADLDTLLE 158
+AP D + A R A A + ++E
Sbjct: 250 VLDLLTEDADDAPGSDPRADFVFANIRPRVLIPAAARITRMVE 292
>gi|77163848|ref|YP_342373.1| hypothetical protein Noc_0315 [Nitrosococcus oceani ATCC 19707]
gi|76882162|gb|ABA56843.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
Length = 223
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
F +DLG G G + + S +V+ ++ + + V + +
Sbjct: 38 AFPSDALSGYVLDLGCGPGDITLRVARAWPSC---IVHGVDGAAAMLHYGQRAVSEAGLK 94
Query: 125 GKV--FACRIQEAPQMITTCDVISA 147
+V R+ DV+ +
Sbjct: 95 ARVKFVHGRLPAVRLPREQYDVLIS 119
>gi|52425643|ref|YP_088780.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia
succiniciproducens MBEL55E]
gi|81825502|sp|Q65S65|RSMC_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|52307695|gb|AAU38195.1| RsmC protein [Mannheimia succiniciproducens MBEL55E]
Length = 333
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 17/91 (18%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG G G G + ++ V + + + + + G+V A +
Sbjct: 197 VLDLGCGAGVIGSMIKLKNP---PAKVTMTDIHAMALASAERTLLENKLSGQVLASDV-- 251
Query: 135 APQMITTCDVISA------------RALADL 153
+ D+I + RA+ +L
Sbjct: 252 FSHVEGKFDLIISNPPFHDGIDTAYRAVREL 282
>gi|77464756|ref|YP_354260.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
2.4.1]
gi|109895916|sp|Q3IYM5|UBIG_RHOS4 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|77389174|gb|ABA80359.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
2.4.1]
Length = 247
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 22/80 (27%), Gaps = 5/80 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L +D+G GGG + + V ++ + + +++
Sbjct: 57 APLPFEGLRLLDIGCGGGLLSEPMARLGAE-----VIGADAAPRNIPVAKLHAEQSGLTI 111
Query: 126 KVFACRIQEAPQMITTCDVI 145
+ DV+
Sbjct: 112 DYRNTTAEALAAAGERFDVV 131
>gi|194439306|ref|ZP_03071385.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
101-1]
gi|194421788|gb|EDX37796.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
101-1]
gi|323969515|gb|EGB64807.1| methyltransferase small domain-containing protein [Escherichia coli
TA007]
Length = 343
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + S I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFSRHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 GVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|332366610|gb|EGJ44354.1| methyltransferase domain protein [Streptococcus sanguinis SK1059]
Length = 195
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ +G +++ + + ++
Sbjct: 50 LSVLDF-EAGERVLDVGCGYG----PLGLTLAKAQGVTATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D I + RA
Sbjct: 105 ISADIFQSNV--YEKVNGIFDHIISNPPIRA 133
>gi|291302833|ref|YP_003514111.1| ArsR family transcriptional regulator [Stackebrandtia nassauensis
DSM 44728]
gi|290572053|gb|ADD45018.1| transcriptional regulator, ArsR family [Stackebrandtia nassauensis
DSM 44728]
Length = 355
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + V L P I +DLGSGGG ++ S + S G L S + A R+ +
Sbjct: 174 DPVAVADLRP-GDIVLDLGSGGGI-DVLLSARRVSPGGKAYGLDASADMVALARRHAAEA 231
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
A + I+ P + D + +
Sbjct: 232 GADNVEFLLGDIENIPLPDASVDAVIS 258
>gi|256762000|ref|ZP_05502580.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis T3]
gi|256683251|gb|EEU22946.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis T3]
Length = 320
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 189 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 240
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 241 HIIEKEGLQDRITVKLMDYRDLKGESFDHITS 272
>gi|284037819|ref|YP_003387749.1| modification methylase, HemK family [Spirosoma linguale DSM 74]
gi|283817112|gb|ADB38950.1| modification methylase, HemK family [Spirosoma linguale DSM 74]
Length = 282
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G G I + L +V + K + R + A + I
Sbjct: 117 ILDIGTGSGCIAITMARFLPQ---SVVTGWDVSEKALTLARQNAEHLKADVQFSIQDILN 173
Query: 135 AP-QMITTCDVISA 147
P D + +
Sbjct: 174 VPADFNERFDCVVS 187
>gi|229117612|ref|ZP_04246984.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock1-3]
gi|228665932|gb|EEL21402.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock1-3]
Length = 257
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S ++ ES + + + F C
Sbjct: 35 RILELGCGTGYVTEKLSNLFPKAHITAIDFAESM------IAVAKTRQNVKNVTFHCEDI 88
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 89 ERLRLEESYDVIISNA 104
>gi|126463597|ref|YP_001044711.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
ATCC 17029]
gi|166201213|sp|A3PNM3|UBIG_RHOS1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|126105261|gb|ABN77939.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
ATCC 17029]
Length = 247
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 22/80 (27%), Gaps = 5/80 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L +D+G GGG + + V ++ + + +++
Sbjct: 57 APLPFEGLRLLDIGCGGGLLSEPMARLGAE-----VIGADAAPRNIPVAKLHAEQSGLTI 111
Query: 126 KVFACRIQEAPQMITTCDVI 145
+ DV+
Sbjct: 112 DYRNTTAEALAAAGERFDVV 131
>gi|321442005|gb|ADW85417.1| arg methyltransferase [Lagoa crispata]
Length = 244
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGATKVIAVECSN-IVDYARKIVEANRLDDI 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|293363670|ref|ZP_06610420.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Mycoplasma alligatoris A21JP2]
gi|292552777|gb|EFF41537.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Mycoplasma alligatoris A21JP2]
Length = 234
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 20/127 (15%)
Query: 26 LEKLEYFYFLFLKWSKKINL-----VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
++K+ + + KINL + E+ + H +DL S
Sbjct: 34 IQKIIGYVEY---ANVKINLNHKVLIPRYETEELVY-------LILSRHKENIDILDLCS 83
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G GF GI + + + L + N+ + A+ ++ + +
Sbjct: 84 GSGFIGIALK---KNQKCFNITLADIDNEAILQSQENSILNDAKVEIIQSDL--FKNINK 138
Query: 141 TCDVISA 147
D+I +
Sbjct: 139 RFDIIVS 145
>gi|254823031|ref|ZP_05228032.1| hypothetical protein MintA_24089 [Mycobacterium intracellulare ATCC
13950]
Length = 249
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN----KKASFLRYVVQKTAARGK 126
+DLG G G + + +L V+L ++ ++A+ V + A R +
Sbjct: 89 GDETVLDLGCGRGAVLLAAAKRLPRGRAIGVDLWQADQTDNSRQATLANAVAEGVADRVE 148
Query: 127 VFACRIQEAPQMITTCDVISA 147
V + P + DV+ +
Sbjct: 149 VRTADVTALPLADESVDVVVS 169
>gi|294941736|ref|XP_002783214.1| protein arginine methyltransferase, putative [Perkinsus marinus
ATCC 50983]
gi|239895629|gb|EER15010.1| protein arginine methyltransferase, putative [Perkinsus marinus
ATCC 50983]
Length = 340
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKA 111
D + R + D+ +FQ +D+GSG G I S+ + V +E S+ +
Sbjct: 35 DAYRRAILDNAHLFQ----GKTVLDVGSGTG----ILSMFAAQAGAEHVYGVEFSEIVEV 86
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R ++E + D+I +
Sbjct: 87 ARAVAAANGFGDRITYIEGEVEEVELPVDKVDIIVS 122
>gi|193713732|ref|XP_001944117.1| PREDICTED: probable protein arginine N-methyltransferase 6-like
[Acyrthosiphon pisum]
Length = 360
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 15/104 (14%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
+ + + + + S VF+ +D+G+G G I SI + V +E
Sbjct: 29 TART---EAYKNAILSSRSVFE----GKTVLDVGAGTG----ILSIFCAQAGATKVFAVE 77
Query: 106 SKNKKASFLRYVVQKTA--ARGKVFACRIQEAPQMITTCDVISA 147
+ +K A R +V + +V ++++ + D+I +
Sbjct: 78 A-SKTAEMARKLVAENHFSDTIEVVYGKVEDV-TLPCKVDIIVS 119
>gi|254302819|ref|ZP_04970177.1| polypeptide chain release factor methyltransferase HemK
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148323011|gb|EDK88261.1| polypeptide chain release factor methyltransferase HemK
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 383
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+G+G G I + + ++ V I+ K
Sbjct: 187 CIQLMRDIEEPN-ILDIGTGSGAISIAIA---NELKSSSVTGIDINEKALKLANENKILN 242
Query: 122 AARGKVFAC-RIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 243 KIENVNFIESNLFEKLDKDFKYDLIVS 269
>gi|126650768|ref|ZP_01722984.1| Methyltransferase [Bacillus sp. B14905]
gi|126592433|gb|EAZ86451.1| Methyltransferase [Bacillus sp. B14905]
Length = 235
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 23/112 (20%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
S +D+G G G + + V I+ R+ ++K V
Sbjct: 41 ASHILDVGCGTGQTAAFLASHYA----AHVTGIDINPIMIEKARHRMKKGHLSVNVIQGS 96
Query: 132 IQEAPQMITTCDVISA----------RALADLDTLL---------EYSFPWL 164
I+E D + A RAL ++ LL E++ P L
Sbjct: 97 IEETTLPNEAFDFVLAESVLAFVNKQRALQEIFRLLKEGGRLIAIEFTVPML 148
>gi|148545646|ref|YP_001265748.1| biotin biosynthesis protein BioC [Pseudomonas putida F1]
gi|148509704|gb|ABQ76564.1| biotin biosynthesis protein BioC [Pseudomonas putida F1]
Length = 276
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 15/101 (14%)
Query: 63 LRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L + + P PS W+DLGSG G + + + + G V++ E L +
Sbjct: 46 LSLLEQLPAGLQPSHWLDLGSGTGHFSRMLAERFAQASGVAVDIAEGM------LLHARH 99
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ P + D++ + L ++
Sbjct: 100 VKGGAQYHVVGDAERLPLRDGSVDLV----FSSLAV--QWC 134
>gi|289193240|ref|YP_003459181.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
gi|288939690|gb|ADC70445.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
Length = 277
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+++G+G G I + E V IE L+ +++
Sbjct: 72 TVLEIGTGAGTLTIPLA-----KEVKKVIAIEKSEMNIRLLKENLRENGIENVEIINADW 126
Query: 134 EAPQMITTCDVISA 147
+ + D++
Sbjct: 127 NSIDIDDKFDLVVC 140
>gi|268326459|emb|CBH40047.1| conserved hypothetical protein, SAM-dependent methyltransferase
type 11 family [uncultured archaeon]
Length = 252
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 12/95 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+D+G+G +I + L+ + G V ++ + R +
Sbjct: 41 FGKEKLNVLDVGTGP----VIIAFLLAEL-GHDVTGVDLSEEMLRNARENAAIFNIPVEF 95
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P + D + R L ++ P
Sbjct: 96 RHGDAENLPFEDESFDAVVNR-----HVL--WTLP 123
>gi|255525325|ref|ZP_05392265.1| ribosomal protein L11 methyltransferase [Clostridium
carboxidivorans P7]
gi|296188193|ref|ZP_06856585.1| ribosomal protein L11 methyltransferase [Clostridium
carboxidivorans P7]
gi|255510997|gb|EET87297.1| ribosomal protein L11 methyltransferase [Clostridium
carboxidivorans P7]
gi|296047319|gb|EFG86761.1| ribosomal protein L11 methyltransferase [Clostridium
carboxidivorans P7]
Length = 311
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 13/103 (12%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
+ I+ + + S D+G+G G I +I + ++ V ++
Sbjct: 157 TGTHETTRMCIK------ALEKYVKPESKIFDIGTGSG----ILAITAAKLKAKEVIGVD 206
Query: 106 SKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
V+ K+ + E Q D++ A
Sbjct: 207 LDPVAVKSASENVKYNDVDNIKILHGNLMEVVQ--GKADIVVA 247
>gi|284038796|ref|YP_003388726.1| methyltransferase type 11 [Spirosoma linguale DSM 74]
gi|283818089|gb|ADB39927.1| Methyltransferase type 11 [Spirosoma linguale DSM 74]
Length = 298
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
F IDLGSG G + + G V I+ S R
Sbjct: 72 FAQIKPGDTVIDLGSGAGNDCFVAR--HETGPTGKVIGIDFTEAMISRARKNADTLGYNN 129
Query: 126 KVFA-CRIQEAPQMITTCDVISA 147
F I+E P T DVI +
Sbjct: 130 VEFRFGDIEEMPVADNTADVIVS 152
>gi|168063390|ref|XP_001783655.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664845|gb|EDQ51550.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARGKVF 128
D G G G I +++ + + ++ +++ K+A +V
Sbjct: 118 EGVTICDAGCGTGSLSIPLALEGAEVYASDISSAMVDEAAKRAEAALK-SNANDKPTQVP 176
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLLEY 159
++ + D +A LD L+ Y
Sbjct: 177 KFEARDLESISGKYDT-----VACLDVLIHY 202
>gi|157368894|ref|YP_001476883.1| 16S ribosomal RNA m2G1207 methyltransferase [Serratia
proteamaculans 568]
gi|226712980|sp|A8G9G5|RSMC_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|157320658|gb|ABV39755.1| rRNA (guanine-N(2)-)-methyltransferase [Serratia proteamaculans
568]
Length = 347
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVED---SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R D SL + L + +D+G G G + S ++ + L
Sbjct: 169 VKTLPGVFSRDGLDVGSSLLLSTLDKHMKGKVLDVGCGAGVMASVLSKLSPKMK---LTL 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + G+V + + D+I +
Sbjct: 226 SDVNAAAIESSRATLAANGIEGEVIVSNV--YSDITGRFDLIIS 267
>gi|46198381|ref|YP_004048.1| methyltransferase [Thermus thermophilus HB27]
gi|46196003|gb|AAS80421.1| methyltransferase [Thermus thermophilus HB27]
Length = 500
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P +D+G+G G + L E V E K + R ++
Sbjct: 109 LALGLPLPPAPRILDVGTGTGAIALALKRALPEAE---VYATEVDPKALALARENAERLG 165
Query: 123 ARGK 126
Sbjct: 166 LAVV 169
>gi|332559650|ref|ZP_08413972.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
2-octaprenyl-6-hydroxy phenol methylase [Rhodobacter
sphaeroides WS8N]
gi|332277362|gb|EGJ22677.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
2-octaprenyl-6-hydroxy phenol methylase [Rhodobacter
sphaeroides WS8N]
Length = 247
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 22/80 (27%), Gaps = 5/80 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L +D+G GGG + + V ++ + + +++
Sbjct: 57 APLPFEGLRLLDIGCGGGLLSEPMARLGAE-----VIGADAAPRNIPVAKLHAEQSGLTI 111
Query: 126 KVFACRIQEAPQMITTCDVI 145
+ DV+
Sbjct: 112 DYRNTTAEALAAAGERFDVV 131
>gi|309792651|ref|ZP_07687105.1| methyltransferase type 11 [Oscillochloris trichoides DG6]
gi|308225317|gb|EFO79091.1| methyltransferase type 11 [Oscillochloris trichoides DG6]
Length = 247
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 4/88 (4%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+SL + +L P + +DLGSGGG + G V ++ + R +K
Sbjct: 39 NSLALAKLQP-GEVVLDLGSGGGLE--VLLAARQVGASGYVYGLDMTDAMLETARRNAEK 95
Query: 121 TAARGKVF-ACRIQEAPQMITTCDVISA 147
A F I+ P + +VI +
Sbjct: 96 VGATNVSFLKGDIEAIPLPDQSVNVIIS 123
>gi|307246943|ref|ZP_07529008.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255925|ref|ZP_07537726.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307260378|ref|ZP_07542085.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852228|gb|EFM84468.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306861193|gb|EFM93186.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865629|gb|EFM97510.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 329
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R+ + + + G V A
Sbjct: 190 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRHTLAENSLEGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSHIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|229588284|ref|YP_002870403.1| protein methyltransferase [Pseudomonas fluorescens SBW25]
gi|229360150|emb|CAY47007.1| protein methyltransferase [Pseudomonas fluorescens SBW25]
Length = 276
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P+ +DLG+G G + + + + + V ++ + + Q+
Sbjct: 109 PAKVLDLGTGSGAIALALASERPAWQ---VTAVDRVLEAVALAERNRQRLHLNNVTVLNS 165
Query: 132 IQEAPQMITTCDVISA 147
+ T D+I +
Sbjct: 166 HWFSALPGHTYDLIIS 181
>gi|220908614|ref|YP_002483925.1| ubiquinone biosynthesis O-methyltransferase [Cyanothece sp. PCC
7425]
gi|219865225|gb|ACL45564.1| ubiquinone biosynthesis O-methyltransferase [Cyanothece sp. PCC
7425]
Length = 258
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 5/77 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V+ ++ + +++ +
Sbjct: 45 QNCRVLDVGCGGGLACEFMARL-----GARVSGMDRSKNSIQIAQEHAKQSELQINYQQG 99
Query: 131 RIQEAPQMITTCDVISA 147
++ P + D +
Sbjct: 100 NAEDLPYQQNSFDCVVC 116
>gi|154148971|ref|YP_001406204.1| bifunctional methyltransferase [Campylobacter hominis ATCC BAA-381]
gi|153804980|gb|ABS51987.1| bifunctional methyltransferase [Campylobacter hominis ATCC BAA-381]
Length = 262
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + + P +++G+G G I+ +I+ + ++ K L+ ++
Sbjct: 96 SLEILKNFKAPK-ILEIGTGSGIISIMLK---KNIKDAEILAVDISKK---ALKTAIKNA 148
Query: 122 AARGKVFACRIQEAPQMIT-TCDVISA 147
G +I + + + D++ +
Sbjct: 149 KFHGVEIDFKISDLFENVEGNFDLVVS 175
>gi|16079772|ref|NP_390596.1| methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
gi|221310653|ref|ZP_03592500.1| hypothetical protein Bsubs1_14851 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314976|ref|ZP_03596781.1| hypothetical protein BsubsN3_14767 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319898|ref|ZP_03601192.1| hypothetical protein BsubsJ_14683 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324178|ref|ZP_03605472.1| hypothetical protein BsubsS_14822 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81814724|sp|O05400|YRHH_BACSU RecName: Full=Putative methyltransferase yrhH
gi|1934612|gb|AAB80865.1| YrhH [Bacillus subtilis subsp. subtilis str. 168]
gi|2635164|emb|CAB14660.1| putative methyltransferase [Bacillus subtilis subsp. subtilis str.
168]
Length = 180
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+K L T+E I DS+ +++G G G + ++ G
Sbjct: 18 RKYKLT--KTIEHMMI----DSI----DIQENDRILEIGIGNG---TVFKSITKKLKKGS 64
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ I+ +K + +K G+VF ++ P T + + +
Sbjct: 65 LKSIDPSKRKVRQISRANRKNMGNGEVFHGYPEDIPFDDRTFNKVFS 111
>gi|330863232|emb|CBX73358.1| protein methyltransferase hemK [Yersinia enterocolitica W22703]
Length = 279
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P +DLG+G G + + + V ++ K + R+ +K A
Sbjct: 97 ALAHLPATPCRILDLGTGTGAIALALASERPD---FAVMGVDIKADAVALARHNAKKLAI 153
Query: 124 RGKVF 128
F
Sbjct: 154 NNVDF 158
>gi|319740469|gb|ADV60528.1| arg methyltransferase [Nataxa flavescens]
Length = 244
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIVEANRLSDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|310829490|ref|YP_003961847.1| hypothetical protein ELI_3940 [Eubacterium limosum KIST612]
gi|308741224|gb|ADO38884.1| hypothetical protein ELI_3940 [Eubacterium limosum KIST612]
Length = 279
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 9/104 (8%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+L + + +D+G G G + + S+ V+ + +K
Sbjct: 53 LDALIITK----EDTVLDVGCGPGRLSVPIAGMAKSVTSLDVS--QQMLEKCQENAAAAG 106
Query: 120 KTAARGKVFACRIQEAPQMITTCDVIS-AR--ALADLDTLLEYS 160
+ ++ + + I D++ +R ALADL L +
Sbjct: 107 VSNLTTRLLNWDDVKPGENIEKHDIVIASRTTALADLIKLNALA 150
>gi|289167734|ref|YP_003446003.1| 16S RNA G1207 methylase RsmC [Streptococcus mitis B6]
gi|288907301|emb|CBJ22137.1| 16S RNA G1207 methylase RsmC [Streptococcus mitis B6]
Length = 196
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ +++ N+ R ++ +F
Sbjct: 55 VNQGETVLDVGCGYG----PLGLSLAKAYEVQSTMVDINNRALDLARQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ T D + + RA
Sbjct: 111 QSNI--YEQVKGTFDHVISNPPIRA 133
>gi|283834504|ref|ZP_06354245.1| methyltransferase, UbiE/COQ5 family [Citrobacter youngae ATCC
29220]
gi|291070054|gb|EFE08163.1| methyltransferase, UbiE/COQ5 family [Citrobacter youngae ATCC
29220]
Length = 256
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ +D+G G G + + V + ++ + ++
Sbjct: 46 ARVLDMGCGAGHASFVAA-----QHVNQVVAYDLSSQMLEVVAKAAKEKELDNITTRQGY 100
Query: 132 IQEAPQMITTCDVISAR 148
+ P DV+ +R
Sbjct: 101 AESLPFEDNAFDVVISR 117
>gi|268324410|emb|CBH37998.1| putative SAM dependent methyltransferase [uncultured archaeon]
Length = 263
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++F+ +D+G+G G I + + V ++E + A +L +
Sbjct: 53 KIFKFQDE-CTVLDVGAGTGAFAIPLA-----KKVSAVTVVEPSKEMAQYLMKSADRNGL 106
Query: 124 RG-KVFACRIQE-APQMITTCDVISA 147
+V R ++ + + +V+ A
Sbjct: 107 NNIEVITKRWEDISRDDLREYNVVLA 132
>gi|265753007|ref|ZP_06088576.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides sp. 3_1_33FAA]
gi|263236193|gb|EEZ21688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides sp. 3_1_33FAA]
Length = 278
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 40/119 (33%), Gaps = 12/119 (10%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYP-SIWIDLGSGGGFPGII 88
E FY L + +K + L+ + + + H Y +D+G+G G +
Sbjct: 76 EEFYGLTFEVNKHV-LIPRPETGELVD-------WIIREHKYGWVKILDIGTGSGCIAVS 127
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ ++E V + K ++ R + + A DVI +
Sbjct: 128 LT---KNLEEAEVVSWDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVS 183
>gi|262404464|ref|ZP_06081019.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC586]
gi|262349496|gb|EEY98634.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC586]
Length = 310
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ +Q +
Sbjct: 128 WLIEEPTRIMDLCTGSGCIAIACANAFPEAE---VDAIDISVDALQVAEQNIQDHGLEQQ 184
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 185 VFPIRSDLFRDLPQ--EQYDLIV 205
>gi|257870910|ref|ZP_05650563.1| modification methylase HemK [Enterococcus gallinarum EG2]
gi|257805074|gb|EEV33896.1| modification methylase HemK [Enterococcus gallinarum EG2]
Length = 278
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 4/77 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G+G G + + + V+L E+ A + + A +
Sbjct: 112 ENLRVVDIGTGTGAIAVSLKLARPHWQIAAVDLSEAALAVA---KENAAQLGAEVAFYQG 168
Query: 131 RIQEAPQMITTCDVISA 147
P + D+I +
Sbjct: 169 DT-LTPVGDQSWDIIVS 184
>gi|258540448|ref|YP_003174947.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus Lc
705]
gi|257152124|emb|CAR91096.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus Lc
705]
Length = 198
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 26/86 (30%), Gaps = 9/86 (10%)
Query: 47 SSSTVEDFWIRHVED--S----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
+T + +H D S V +D+G+G G G+ + + +
Sbjct: 28 RFTTDNGVFSKHTVDFGSRVLIAAVLAETLPDGPILDVGAGYGPIGLPLAKHFPNRQ--- 84
Query: 101 VNLIESKNKKASFLRYVVQKTAARGK 126
V + + + + +
Sbjct: 85 VTMSDVNERALALAKQNAADNGITNV 110
>gi|332305937|ref|YP_004433788.1| Methyltransferase type 12 [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173266|gb|AEE22520.1| Methyltransferase type 12 [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 417
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 22/77 (28%), Gaps = 5/77 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
P +D+G G + + + V ++ + +
Sbjct: 201 PKRILDIGCTVGHNALPLAQHFPDAQ---VIAVDVARPSLRYAHARAASLGIENIQFVQA 257
Query: 131 RIQEAPQM-ITTCDVIS 146
+E Q + D+I+
Sbjct: 258 NAEELSQYDDGSFDLIT 274
>gi|321441979|gb|ADW85404.1| arg methyltransferase [Chelepteryx collesi]
Length = 244
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIIEANRLSDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|312127403|ref|YP_003992277.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777422|gb|ADQ06908.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
hydrothermalis 108]
Length = 304
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I +I V ++ +
Sbjct: 161 AIQKYVKPEMDVLDVGTGSG----ILAIAAKKFLAKRVLAVDIDEVAVKVAEENARLNGV 216
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ + E + DV+ A
Sbjct: 217 EIEIKKNDLVEGIE--EKFDVVIA 238
>gi|311693604|gb|ADP96477.1| modification methylase, HemK family [marine bacterium HP15]
Length = 283
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 4/84 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P + +DLG+G G + + S G ++ ++ + + R
Sbjct: 107 ALALPLPRQASVLDLGTGTGAIALALA---SEHGGWRISACDAVPEAVALARENAVALGL 163
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
V + D+I +
Sbjct: 164 NLSVVQSSWFSGLEP-ERFDLIVS 186
>gi|296101960|ref|YP_003612106.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295056419|gb|ADF61157.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 276
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L S +DLG+G G + + + V ++ + + V++
Sbjct: 102 ALARLPAAASRILDLGTGTGAIALALATERPDC---AVTAVDVMPDAVALAQRNVERLGV 158
Query: 124 RGKVF 128
Sbjct: 159 TNVTV 163
>gi|311742905|ref|ZP_07716713.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromicrobium
marinum DSM 15272]
gi|311313585|gb|EFQ83494.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromicrobium
marinum DSM 15272]
Length = 409
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +++G+G G +I ++ G V I ++A+ + + +V
Sbjct: 193 EGTRVLEIGTGWG----ALAI-RAAQRGAHVTTITISQEQAALAQQRIDAAGLTDRV-DL 246
Query: 131 RIQEAPQMITTCDVISA 147
R+Q+ ++ D I +
Sbjct: 247 RLQDYREVQGQFDAIVS 263
>gi|258626193|ref|ZP_05721041.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262166219|ref|ZP_06033956.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus VM223]
gi|262170895|ref|ZP_06038573.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus
MB-451]
gi|258581548|gb|EEW06449.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|261891971|gb|EEY37957.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus
MB-451]
gi|262025935|gb|EEY44603.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus VM223]
Length = 310
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ +Q +
Sbjct: 128 WLIEEPTRIMDLCTGSGCIAIACANAFPEAE---VDAIDISVDALQVAEQNIQDHGLEQQ 184
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 185 VFPIRSDLFRDLPQ--EQYDLIV 205
>gi|297569908|ref|YP_003691252.1| Methyltransferase type 11 [Desulfurivibrio alkaliphilus AHT2]
gi|296925823|gb|ADH86633.1| Methyltransferase type 11 [Desulfurivibrio alkaliphilus AHT2]
Length = 264
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + Q P + +DLG G G + + + G + I+S L+ + +
Sbjct: 34 LGLCQELPQSPMILDLGCGVGGQTLQLAELIP---TGSIVAIDSHAPNIQRLQAAIAERG 90
Query: 123 A--RGKVFACRIQEAPQMITTCDVISA 147
R + Q + D++ +
Sbjct: 91 LAQRVSAIVGDMSRPGQSPGSFDLVWS 117
>gi|269124119|ref|YP_003306696.1| Methyltransferase type 12 [Streptobacillus moniliformis DSM 12112]
gi|268315445|gb|ACZ01819.1| Methyltransferase type 12 [Streptobacillus moniliformis DSM 12112]
Length = 494
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+++G G I +I + E V ++ + +++K + K++ I
Sbjct: 47 RVLEIGCSFGGNIIPIAISNPNSE---VIGLDLSKVQIDEGNDIIEKIGLKNIKLYHKNI 103
Query: 133 QEAPQMITTCDVISA 147
E D I
Sbjct: 104 VEYNNEFGKFDYIIC 118
>gi|86157303|ref|YP_464088.1| type 11 methyltransferase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773814|gb|ABC80651.1| Methyltransferase type 11 [Anaeromyxobacter dehalogenans 2CP-C]
Length = 253
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 32/105 (30%), Gaps = 12/105 (11%)
Query: 64 RVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+ P +D+G GF S+++ V ++ + + R +
Sbjct: 43 AIAPALPQDLSGRSVLDVGCNAGF----FSLEMKRRGADRVLGVDFDPRYLAQARLAAEI 98
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + + + ++ DV+ + L P L
Sbjct: 99 SGLDVEFRELSVYDVARLGERFDVVLF-----MGVLYHLRHPLLA 138
>gi|324990800|gb|EGC22735.1| methyltransferase domain protein [Streptococcus sanguinis SK353]
Length = 195
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ G +++ + + ++
Sbjct: 50 LSVLDF-EAEERVLDVGCGYG----PLGLTLAKAHGVAATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D I + RA
Sbjct: 105 VSAHIFQSNV--YEKVSGIFDHIISNPPIRA 133
>gi|300715160|ref|YP_003739963.1| ribosomal RNA small subunit methyltransferase C [Erwinia billingiae
Eb661]
gi|299060996|emb|CAX58103.1| Ribosomal RNA small subunit methyltransferase C [Erwinia billingiae
Eb661]
Length = 344
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVEDS---LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D+ L + L P+ +D+G G G + + +
Sbjct: 167 LT-IKTLPGVFSRDGLDAGSNLLLSTLKPHMKGKVLDMGCGAGVLSAMLASFSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + + G+VFA + + D+I +
Sbjct: 223 LFMTDVNAAAIEASKATLAANDLEGEVFASNV--YSDVNGRYDMIIS 267
>gi|270292559|ref|ZP_06198770.1| methyltransferase domain protein [Streptococcus sp. M143]
gi|270278538|gb|EFA24384.1| methyltransferase domain protein [Streptococcus sp. M143]
Length = 196
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L G +++ N+ R ++ +F
Sbjct: 55 VNEGETVLDVGCGYG----PLGLSLVKAYGVQATMVDINNRALDLARQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 111 QSNI--YEQVEGKFDHVISNPPIRA 133
>gi|257139135|ref|ZP_05587397.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia thailandensis E264]
Length = 404
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S IE+ + + +
Sbjct: 239 LALGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCRTIA---IEAHPARQRIIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI-----SAR 148
++ A R EA + D + +R
Sbjct: 296 GVPALELVAGRAPEALAGLPAPDAVFVGGGVSR 328
>gi|256072449|ref|XP_002572548.1| protein arginine n-methyltransferase [Schistosoma mansoni]
gi|238657708|emb|CAZ28780.1| protein arginine n-methyltransferase, putative [Schistosoma
mansoni]
Length = 1564
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV--VQK 120
L + + I +D+GSG G I SI + V +E+ ++ + V
Sbjct: 231 LSNAEKYFKHKIILDVGSGSG----ILSIIAAQAGASHVYGVEAADEIYAASHETLRVNN 286
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
R + + + DVI +
Sbjct: 287 LLERVTFIHGQAESVELPVKKVDVIIS 313
>gi|224418458|ref|ZP_03656464.1| SAM dependent methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|253827774|ref|ZP_04870659.1| putative O-methyltransferase [Helicobacter canadensis MIT 98-5491]
gi|313141990|ref|ZP_07804183.1| methyltransferase small [Helicobacter canadensis MIT 98-5491]
gi|253511180|gb|EES89839.1| putative O-methyltransferase [Helicobacter canadensis MIT 98-5491]
gi|313131021|gb|EFR48638.1| methyltransferase small [Helicobacter canadensis MIT 98-5491]
Length = 230
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +++GSG G + + + + +IE K ++ ++
Sbjct: 23 ALKYFKPKKQVLEVGSGSG----VLGLLCAKEVEMDLTMIEKNPKMLELCQHNLRINGVE 78
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
K+ E + D I +
Sbjct: 79 AKLMGGDFLEYNFLDLKFDYILS 101
>gi|254434986|ref|ZP_05048493.1| Methyltransferase domain family [Nitrosococcus oceani AFC27]
gi|207088097|gb|EDZ65369.1| Methyltransferase domain family [Nitrosococcus oceani AFC27]
Length = 227
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
F +DLG G G + + S +V+ ++ + + V + +
Sbjct: 42 AFPSDALSGYVLDLGCGPGDITLRVARAWPSC---IVHGVDGAAAMLHYGQRAVSEAGLK 98
Query: 125 GKV--FACRIQEAPQMITTCDVISA 147
+V R+ DV+ +
Sbjct: 99 ARVKFVHGRLPAVRLPREQYDVLIS 123
>gi|125717866|ref|YP_001034999.1| hypothetical protein SSA_1034 [Streptococcus sanguinis SK36]
gi|125497783|gb|ABN44449.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
gi|327489168|gb|EGF20961.1| methyltransferase domain protein [Streptococcus sanguinis SK1058]
Length = 195
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ G +++ + + ++
Sbjct: 50 LSVLDF-EAEERVLDVGCGYG----PLGLTLAKAHGVAATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D I + RA
Sbjct: 105 VSAHIFQSNV--YEKVSGIFDHIISNPPIRA 133
>gi|150020095|ref|YP_001305449.1| ribosomal L11 methyltransferase [Thermosipho melanesiensis BI429]
gi|259534597|sp|A6LJG3|PRMA_THEM4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|149792616|gb|ABR30064.1| ribosomal L11 methyltransferase [Thermosipho melanesiensis BI429]
Length = 258
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 16/103 (15%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +DLG G G I SI + V +++ ++
Sbjct: 124 LKKYLRQGMDVLDLGCGSG----ILSILAKKLGASGVLAVDNDKMAV---ESAIENVEKN 176
Query: 125 GKVFACRIQE-APQMITTCDVISA--------RALADLDTLLE 158
R+ + + D+I + +AL D+ L+
Sbjct: 177 NVEVEIRVSDLLKNVDGKYDLIVSNIIADVLVKALEDMPKFLK 219
>gi|15898819|ref|NP_343424.1| hypothetical protein SSO2027 [Sulfolobus solfataricus P2]
gi|227829825|ref|YP_002831604.1| Methyltransferase type 11 [Sulfolobus islandicus L.S.2.15]
gi|284997095|ref|YP_003418862.1| Methyltransferase type 11 [Sulfolobus islandicus L.D.8.5]
gi|13815308|gb|AAK42214.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|227456272|gb|ACP34959.1| Methyltransferase type 11 [Sulfolobus islandicus L.S.2.15]
gi|284444990|gb|ADB86492.1| Methyltransferase type 11 [Sulfolobus islandicus L.D.8.5]
Length = 189
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 16/120 (13%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + +LVS R + +DLG G GF I
Sbjct: 9 DRYINPLVLDNSLRSLVSP--PNRILSR-------FVKYLKEDYTVVDLGCGPGFFTTIL 59
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITT-CDVISA 147
+ + V ++ + L+ VQK + + + Q+ + D + +
Sbjct: 60 ARIVK-----TVYAVDPDERAIRRLKEKVQKLSLNNVIPYVAPAQKLEFIKDKSIDFVFS 114
>gi|109899040|ref|YP_662295.1| methyltransferase type 12 [Pseudoalteromonas atlantica T6c]
gi|109701321|gb|ABG41241.1| Methyltransferase type 12 [Pseudoalteromonas atlantica T6c]
Length = 422
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
P +D+G G + + E V ++ + + +
Sbjct: 202 PKRILDIGCTVGHNALPLAEHFPDAE---VIAVDVARPSLRYAHARAKSLGLSNIQFVQA 258
Query: 131 RIQEAPQM-ITTCDVIS 146
++ Q + D+I+
Sbjct: 259 NAEDLSQYDDGSFDLIT 275
>gi|319740461|gb|ADV60524.1| arg methyltransferase [Lemonia dumi]
Length = 244
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIIEANRLSDI 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|209882166|ref|XP_002142520.1| arginine N-methyltranferase 1 protein [Cryptosporidium muris RN66]
gi|209558126|gb|EEA08171.1| arginine N-methyltranferase 1 protein, putative [Cryptosporidium
muris RN66]
Length = 347
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ I +D+GSG G + + + V IE +Y+++ +
Sbjct: 60 RHIFENKIVLDIGSGTGILCMFAATAGAK----HVYGIECSE-IIDVAKYIIKDNKLEDR 114
Query: 127 V--FACRIQEAPQMITTCDVISA 147
+ C+ +EA + D+I +
Sbjct: 115 ITFIQCKAEEAVLPVEKVDIIIS 137
>gi|126658081|ref|ZP_01729233.1| Methyltransferase type 12 [Cyanothece sp. CCY0110]
gi|126620719|gb|EAZ91436.1| Methyltransferase type 12 [Cyanothece sp. CCY0110]
Length = 377
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G G I +I+ E V+ I+ + V
Sbjct: 199 PRRILDMGCSAGGSTIAMAIEFPDAE---VHGIDISSSMLRCGHAVSVALDLPIYYHQMD 255
Query: 132 IQEAPQMITTCDVISA 147
+ D+I +
Sbjct: 256 ASHTTFGDGSFDLIVS 271
>gi|71278012|ref|YP_270225.1| HemK family modification methylase [Colwellia psychrerythraea 34H]
gi|71143752|gb|AAZ24225.1| modification methylase, HemK family [Colwellia psychrerythraea 34H]
Length = 285
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 17/98 (17%)
Query: 53 DFWIRHV--EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ + H D+L DLG+G G + + + + + ++ I+
Sbjct: 104 ELVLEHFGELDTLHCL----------DLGTGTGAIALALASEQPNWQ---IDAIDFSLDA 150
Query: 111 ASFLRYVVQKTAA-RGKVFACRIQEAPQMITTCDVISA 147
+ Q +F A DVI +
Sbjct: 151 VKLAKQNAQDLHLSHVNIFQSDWFNAVNER-KFDVIVS 187
>gi|46580614|ref|YP_011422.1| hypothetical protein DVU2209 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602076|ref|YP_966476.1| methyltransferase small [Desulfovibrio vulgaris DP4]
gi|46450033|gb|AAS96682.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562305|gb|ABM28049.1| methyltransferase small [Desulfovibrio vulgaris DP4]
gi|311234348|gb|ADP87202.1| methyltransferase small [Desulfovibrio vulgaris RCH1]
Length = 240
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 8/102 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + P +++G+G G G+I S V + + F R V K
Sbjct: 78 LRKASPEGRTLLEVGAGCGVTGLIAS----RYGFAHVTVSDINEDALLFARANVLKNGLE 133
Query: 125 GKVFACRIQEAP-QMITTCDVISARALADLDTLLEYSFPWLY 165
+V R+ A ++ DVI A +++ L E P +
Sbjct: 134 DRVSVRRVDVASTRLDEKFDVI---AASEVLYLEELHRPLIK 172
>gi|107103027|ref|ZP_01366945.1| hypothetical protein PaerPA_01004096 [Pseudomonas aeruginosa PACS2]
Length = 338
Score = 35.5 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 25/98 (25%), Gaps = 9/98 (9%)
Query: 55 WIRHVE-----DSL-RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
W +H SL V + +D G G G I+ + + V +
Sbjct: 135 WYKHFLVQHWIPSLDGVKEKLQAGGSVLDFGCGSGLAAIMMAKAFPEAQ---VYGCDFHA 191
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
R + +V D ++
Sbjct: 192 PSIERARANAEAAGVGDRVRFEVSDSDALAGKKFDFVT 229
>gi|328474212|gb|EGF45017.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus 10329]
Length = 341
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I + + + + + ++
Sbjct: 192 LLLETLPNLSGKVLDFGCGAGVLGAFMAKANPEI---AIEMCDINAYAITSSQATLEANG 248
Query: 123 ARGKVFACRI 132
G+VFA I
Sbjct: 249 LSGRVFASDI 258
>gi|319761652|ref|YP_004125589.1| protein-(glutamine-n5) methyltransferase, release factor-specific
[Alicycliphilus denitrificans BC]
gi|317116213|gb|ADU98701.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Alicycliphilus denitrificans BC]
Length = 281
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 6/85 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P P DLG+G G + V +++ + R ++
Sbjct: 106 LELLAPLPAP-RVADLGTGSGAIALALQHARPDAR---VLAMDASAGALAVARANAERLG 161
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + D I +
Sbjct: 162 LPVRFVQADW--LAGIAGPFDAIVS 184
>gi|271969201|ref|YP_003343397.1| hypothetical protein Sros_7999 [Streptosporangium roseum DSM 43021]
gi|270512376|gb|ACZ90654.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 189
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 11/82 (13%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARGKVF 128
+ +DL +G G ++ L ++ G V+ L+ES K A +R + G +
Sbjct: 45 DGARVLDLYAGSG------AVGLEALSRGAVHALLVESDAKAARTIRANIATLGLPGALL 98
Query: 129 AC-RIQEAPQM--ITTCDVISA 147
A R++ + D++ A
Sbjct: 99 AADRVERVLERGTEEPYDLVFA 120
>gi|158425970|ref|YP_001527262.1| methlytransferase [Azorhizobium caulinodans ORS 571]
gi|158332859|dbj|BAF90344.1| methlytransferase [Azorhizobium caulinodans ORS 571]
Length = 264
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG----KVF 128
+DLG GGG + + + ++ +S L+ VV + RG
Sbjct: 55 DRLLDLGCGGGHVSFTAAPLVRHVMAYDLS--------SSMLQAVVDEAQGRGLDNIATE 106
Query: 129 ACRIQEAPQMITTCDVISAR 148
R ++ P + D + +R
Sbjct: 107 QGRAEDLPFADASFDWVVSR 126
>gi|153838411|ref|ZP_01991078.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Vibrio
parahaemolyticus AQ3810]
gi|149748218|gb|EDM59077.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Vibrio
parahaemolyticus AQ3810]
Length = 341
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I + + + + + ++
Sbjct: 192 LLLETLPNLSGKVLDFGCGAGVLGAFMAKANPEI---AIEMCDINAYAITSSQATLEANG 248
Query: 123 ARGKVFACRI 132
G+VFA I
Sbjct: 249 LSGRVFASDI 258
>gi|28899251|ref|NP_798856.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio
parahaemolyticus RIMD 2210633]
gi|260362175|ref|ZP_05775165.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus K5030]
gi|260879053|ref|ZP_05891408.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus AN-5034]
gi|260895928|ref|ZP_05904424.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus Peru-466]
gi|260903439|ref|ZP_05911834.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus AQ4037]
gi|81726990|sp|Q87LY1|RSMC_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|28807475|dbj|BAC60740.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio
parahaemolyticus RIMD 2210633]
gi|308085366|gb|EFO35061.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus Peru-466]
gi|308089537|gb|EFO39232.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus AN-5034]
gi|308106585|gb|EFO44125.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus AQ4037]
gi|308111050|gb|EFO48590.1| ribosomal RNA small subunit methyltransferase C [Vibrio
parahaemolyticus K5030]
Length = 341
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I + + + + + ++
Sbjct: 192 LLLETLPNLSGKVLDFGCGAGVLGAFMAKANPEI---AIEMCDINAYAITSSQATLEANG 248
Query: 123 ARGKVFACRI 132
G+VFA I
Sbjct: 249 LSGRVFASDI 258
>gi|319740457|gb|ADV60522.1| arg methyltransferase [Endromis versicolora]
Length = 244
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGATKVIAVECSN-IVDYARKIIEANRLSDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|240137468|ref|YP_002961939.1| putative UbiG: ubiquinone biosynthesis O-methyltransferase
[Methylobacterium extorquens AM1]
gi|240007436|gb|ACS38662.1| putative UbiG: ubiquinone biosynthesis O-methyltransferase
[Methylobacterium extorquens AM1]
Length = 245
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 39/144 (27%), Gaps = 24/144 (16%)
Query: 16 LNTYNVSRETLEKLEYFYF----------LFLKWSKKINLVS-SSTVE-DFWIRHVEDSL 63
+ ++ R+ + + + + K++ V + R D
Sbjct: 1 MTGASIDRDEVARFDALAARWWDERGPMAVLHKFNPVR--VGYIRDEACRIFDR---DPA 55
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
F L ID+G GGG + G V ++ + R +
Sbjct: 56 APFPL--EGLSVIDIGCGGGVLSEPLARL-----GATVTGLDPATGNIAAARAHAEAEGL 108
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
I+ D++ A
Sbjct: 109 TIDYRDETIEAVAARGERFDIVLA 132
>gi|261404645|ref|YP_003240886.1| type 11 methyltransferase [Paenibacillus sp. Y412MC10]
gi|261281108|gb|ACX63079.1| Methyltransferase type 11 [Paenibacillus sp. Y412MC10]
Length = 201
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ Q + + +G+G FP + V ++ + + R + + R
Sbjct: 33 LLQGVEGKVLEVAVGAGANFP-------FYHPDTVDVTAVDFSPEMLTRARQMASELGIR 85
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
I+ + D + +
Sbjct: 86 ATFLERDIETLELPERSYDCVVS 108
>gi|1808644|emb|CAA71763.1| arginine methyltransferase [Homo sapiens]
Length = 347
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNK--KASFLRYVVQKTA 122
+ + +D+GSG G + + + G+V + + K KA+ L +VV
Sbjct: 60 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIVCSSISDYAVKIVKANKLDHVV---- 115
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 116 ---TIIKGKVEEVELPVEKVDIIIS 137
>gi|1808646|emb|CAA71764.1| arginine methyltransferase [Homo sapiens]
Length = 361
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNK--KASFLRYVVQKTA 122
+ + +D+GSG G + + + G+V + + K KA+ L +VV
Sbjct: 74 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIVCSSISDYAVKIVKANKLDHVV---- 129
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 130 ---TIIKGKVEEVELPVEKVDIIIS 151
>gi|1808648|emb|CAA71765.1| arginine methyltransferase [Homo sapiens]
Length = 343
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNK--KASFLRYVVQKTA 122
+ + +D+GSG G + + + G+V + + K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIVCSSISDYAVKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|308048313|ref|YP_003911879.1| methyltransferase small [Ferrimonas balearica DSM 9799]
gi|307630503|gb|ADN74805.1| methyltransferase small [Ferrimonas balearica DSM 9799]
Length = 341
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 6/85 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ HP +D G G G G + + +IE + +++ + + + +
Sbjct: 192 LQHLPEHPVG-RVLDFGCGDGVIGAFLARRNPAIE---LEMVDINAMALAASQQTLAQNG 247
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+GKV+ + D+I +
Sbjct: 248 LKGKVYPSNG--LSGVEGQFDLIVS 270
>gi|262194909|ref|YP_003266118.1| methyltransferase type 11 [Haliangium ochraceum DSM 14365]
gi|262078256|gb|ACY14225.1| Methyltransferase type 11 [Haliangium ochraceum DSM 14365]
Length = 274
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 11/96 (11%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GK 126
L P D+G G G + + +G V+L++ + R ++ R
Sbjct: 43 LDPNHKRIADIGGGTGIYALWLA-----AQGYDVSLLDPVERHVELARESAEQAGLRLAS 97
Query: 127 VFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
V + P + DV AL + L + P
Sbjct: 98 VDRGDARALPYDDASMDV----ALM-MGPLYHLTTP 128
>gi|218461071|ref|ZP_03501162.1| putative methyltransferase protein [Rhizobium etli Kim 5]
Length = 160
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 24/125 (19%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
TL++ +++ + ++ LR+ +D+G G G
Sbjct: 2 TLDRADFYDAELARHNQH--------------------LRIAAGVGAGDRVLDIGCGAGQ 41
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCD 143
+ ++ +G V ++ + R R VF Q D
Sbjct: 42 TTREAA--RAATQGEAVG-VDVSAEMLEVARRRSAAEGLRNVVFEQADAQSHAFPRAGFD 98
Query: 144 VISAR 148
+ +R
Sbjct: 99 LCISR 103
>gi|255933734|ref|XP_002558246.1| Pc12g14410 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582865|emb|CAP81068.1| Pc12g14410 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 266
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+G G G I + + G V +E R + Q
Sbjct: 29 LLPHLKPDMRILDVGCGPGSITISLA---KHVLSGHVTGVEYVPDPLDGARALAQAEGVS 85
Query: 125 GKVFA-CRIQEAPQMITTCDVI 145
F I + P T D++
Sbjct: 86 NITFREGNIHDLPFEDNTFDIV 107
>gi|167910926|ref|ZP_02498017.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 112]
Length = 193
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 34 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 90
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 91 RAPDALAGLRAPDAVFVGGGVSR 113
>gi|134295718|ref|YP_001119453.1| precorrin-6Y C5,15-methyltransferase [Burkholderia vietnamiensis
G4]
gi|134138875|gb|ABO54618.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia vietnamiensis G4]
Length = 405
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S IES ++ ++ +
Sbjct: 239 LTLGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCHAIA---IESHAERQRYIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ A R A + D I
Sbjct: 296 GVPGLQLVAGRAPAALMGLAPPDAI 320
>gi|157826024|ref|YP_001493744.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia akari str.
Hartford]
gi|166201215|sp|A8GPB1|UBIG_RICAH RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|157799982|gb|ABV75236.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia akari str.
Hartford]
Length = 251
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 6/73 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + + +G V I++ ++ + I+E
Sbjct: 57 ILDVGCGGGLIAMPLA-----AQGFNVTAIDALQSNIETASTYAKENNVKINYLQSTIEE 111
Query: 135 APQMITTCDVISA 147
DV+
Sbjct: 112 LESDKL-YDVVIC 123
>gi|326794745|ref|YP_004312565.1| 3-demethylubiquinone-9 3-methyltransferase [Marinomonas
mediterranea MMB-1]
gi|326545509|gb|ADZ90729.1| 3-demethylubiquinone-9 3-methyltransferase [Marinomonas
mediterranea MMB-1]
Length = 241
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 29/140 (20%)
Query: 17 NTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHP----YP 72
++ NV +E + K E + + +F H + LRV ++
Sbjct: 7 SSLNVDQEEIAKFEALASKWWDKNS-----------EFKPLHEINPLRVNYINERSPLDG 55
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVN----LIESKNKKASFLRYVVQKTAARGKVF 128
ID+G GGG ++ +++ G + + S + K ++
Sbjct: 56 KKVIDVGCGGGILSESMALMGANVRGIDMGEAPLGVASLHAK---------ESGVDVAYE 106
Query: 129 ACRIQE-APQMITTCDVISA 147
+E A + D+++
Sbjct: 107 QITAEEIAERDSEQYDIVTC 126
>gi|291617196|ref|YP_003519938.1| HemK [Pantoea ananatis LMG 20103]
gi|291152226|gb|ADD76810.1| HemK [Pantoea ananatis LMG 20103]
Length = 344
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P+ +D+G+G G + + + + V ++ + + A
Sbjct: 103 ALAHLPESPARVLDMGTGSGAIALAIASERPDCD---VIGVDRIPAAVALAQRNAAHLAI 159
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
F A D+I +
Sbjct: 160 PNATFIQSHWFAQITPARLDLIVS 183
>gi|323525177|ref|YP_004227330.1| type 11 methyltransferase [Burkholderia sp. CCGE1001]
gi|323382179|gb|ADX54270.1| Methyltransferase type 11 [Burkholderia sp. CCGE1001]
Length = 250
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +D+G G G + + V + + + ++ +
Sbjct: 42 GASVLDMGCGAGHASFAVA-----PQAKEVIAYDIAAPMLATVEGAAKERGLANIRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
++ P T D + +R
Sbjct: 97 AAEKLPFDDHTFDWVISR 114
>gi|264676910|ref|YP_003276816.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
gi|262207422|gb|ACY31520.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
Length = 291
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 25/149 (16%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRV-------------FQ 67
+S+E ++ + L + + L + + DS + +
Sbjct: 60 LSQEQQQRWDQLCTLRQQGTPVAYLTGNKEFYGLDLA--VDSRVLDPRPDTETLVDWALE 117
Query: 68 LHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P P IDLG+G G + Q S V +++ + R +
Sbjct: 118 LMPERQPVRVIDLGTGSGAIALALQSQRPSAR---VIAVDASADALAVARSNAARLQLPV 174
Query: 126 KVFACRIQEAPQMITTCDVISA-----RA 149
+ E + D+I + RA
Sbjct: 175 QFAHGSWLEPLDGLEPVDLIVSNPPYIRA 203
>gi|225351438|ref|ZP_03742461.1| hypothetical protein BIFPSEUDO_03033 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157782|gb|EEG71065.1| hypothetical protein BIFPSEUDO_03033 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 247
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR P ++DLG G G + + + ++ + R +
Sbjct: 96 LRQAPEPPEEGTFLDLGCGWGPIALTLGFASPKAD---IWALDVNERALDLTRRNAELNG 152
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
R V A E P + T D+I +
Sbjct: 153 VRN-VHAVTADEIPSDM-TFDLIWS 175
>gi|260825710|ref|XP_002607809.1| hypothetical protein BRAFLDRAFT_117306 [Branchiostoma floridae]
gi|229293158|gb|EEN63819.1| hypothetical protein BRAFLDRAFT_117306 [Branchiostoma floridae]
Length = 521
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + Q + +D+G G G + + +S + V+ E K +R
Sbjct: 233 DFIMTNQHLFKDKVVLDVGCGTGILSMFAARAGAS-QVIAVDQSEIIYKAMDIVRE--NN 289
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
K+ R+++ + DVI +
Sbjct: 290 LDHVIKLIKGRVEDIQLPVEKVDVIIS 316
>gi|167581863|ref|ZP_02374737.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia thailandensis TXDOH]
Length = 355
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P P + D+G+G G GI S IE+ + + +
Sbjct: 190 LALGRLAPAPGELLWDVGAGSGSIGIEWMRAHPSCRTIA---IEAHPARQRIIEHNRDAL 246
Query: 122 AARG-KVFACRIQEAPQMITTCDVI-----SAR 148
++ A R EA + D + +R
Sbjct: 247 GVPALELVAGRAPEALAGLPAPDAVFVGGGVSR 279
>gi|167560945|ref|ZP_02353861.1| methyltransferase [Burkholderia oklahomensis EO147]
Length = 293
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 15/95 (15%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G G G + + L V++ E + R ++ A
Sbjct: 49 DGRHVLDVGCGAGATTLAVARLLGERGRCVGVDVSEPL---IAAARGRAEREGAPAHFVR 105
Query: 130 CRIQEAPQMITTCDVISAR-----------ALADL 153
Q + D I +R A A+L
Sbjct: 106 ADAQTHAFAPASFDTIISRFGVMFFENAVDAFANL 140
>gi|154174049|ref|YP_001407413.1| hypothetical protein CCV52592_0091 [Campylobacter curvus 525.92]
gi|112802165|gb|EAT99509.1| conserved hypothetical protein [Campylobacter curvus 525.92]
Length = 240
Score = 35.5 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 5/90 (5%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
R V D+L+ F ++ +D+G G G ++ + E + ++S LR
Sbjct: 23 QRQVFDALQNFGVNFSGKSLVDIGCGTGVWTLLLA-----KEASHITAVDSSAGMIDILR 77
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVI 145
K + + + + D+
Sbjct: 78 QDAAKFSVKNVTAVQKSWQEFSCDEIYDIA 107
>gi|325687971|gb|EGD29991.1| methyltransferase domain protein [Streptococcus sanguinis SK72]
gi|327469474|gb|EGF14943.1| methyltransferase domain protein [Streptococcus sanguinis SK330]
Length = 195
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ +G +++ + + ++
Sbjct: 50 LSVLDF-EAGERVLDVGCGYG----PLGLTLAKAQGVAATMLDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D I + RA
Sbjct: 105 VSAHIFQSNV--YEKVNGIFDHIISNPPIRA 133
>gi|319946887|ref|ZP_08021121.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
australis ATCC 700641]
gi|319746935|gb|EFV99194.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
australis ATCC 700641]
Length = 187
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 13/98 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+GSG G I ++ ++E V IE + + + +
Sbjct: 31 AKRMLDVGSGTGSVTIQAAVSFPNLE---VVAIEQNEDAVALTQENIDYFGCQNITLIK- 86
Query: 132 IQEAP-QMITTCDVISARAL----ADLDTLLEYSFPWL 164
+AP ++ D I + ++ + E+ L
Sbjct: 87 -GKAPVELEGQFDAIF---VGGTGGNMAEIFEWCEHLL 120
>gi|307265647|ref|ZP_07547200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter wiegelii Rt8.B1]
gi|326389250|ref|ZP_08210818.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter ethanolicus JW 200]
gi|306919291|gb|EFN49512.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter wiegelii Rt8.B1]
gi|325994613|gb|EGD53037.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter ethanolicus JW 200]
Length = 279
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V + ++ +D+G+G G + S + V ++ K +Y +K
Sbjct: 103 VLKRVERGNVILDIGTGSGAIAVSISKYFADC---TVYAVDISKKAIEVAKYNAEKQGVL 159
Query: 125 GKVF--ACRIQEAPQMITTCDVISA 147
++F + D I +
Sbjct: 160 DRIFFIESDLFRNLPPNLKFDFIVS 184
>gi|256831046|ref|YP_003159774.1| type 11 methyltransferase [Desulfomicrobium baculatum DSM 4028]
gi|256580222|gb|ACU91358.1| Methyltransferase type 11 [Desulfomicrobium baculatum DSM 4028]
Length = 272
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 64 RVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK---ASFLRYVVQ 119
V P + +D+G+G G + +G V +E + A +R +
Sbjct: 51 AVRDFLPASCGMALDVGAGRGIASFALA-----ADGWRVTALEPDPSRLVGAGAIRELAS 105
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ A V ++ P + D+I AR +
Sbjct: 106 QAAVNITVVEEWGEKLPFEDGSFDLIHARQV 136
>gi|255644892|gb|ACU22946.1| unknown [Glycine max]
Length = 374
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ H +D+G+G G I +I + V +E+ K + R +V+ +
Sbjct: 57 KRHFAGKTVLDVGTGSG----ILAIWSAQAGARKVYAVEAT-KMSEHARALVKANNLQDV 111
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+V ++E + DVI +
Sbjct: 112 VEVIEGSMEEI-TLPEKVDVIIS 133
>gi|167855852|ref|ZP_02478603.1| tellurite resistance protein TehB [Haemophilus parasuis 29755]
gi|167853002|gb|EDS24265.1| tellurite resistance protein TehB [Haemophilus parasuis 29755]
Length = 287
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK NL + T + + +DLG G G + +++G
Sbjct: 100 KKYNLTA--THSEVLN---------AMNYLSTGKVLDLGCGRGRNALYL-----NLKGFD 143
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++ + FL +++K A+ + D I +
Sbjct: 144 VTAVDQNEESIHFLNSIIEKEDAQHIQTGIYDINQANIQGEFDFIVS 190
>gi|323476778|gb|ADX82016.1| Methyltransferase type 11 [Sulfolobus islandicus HVE10/4]
Length = 189
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 16/120 (13%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + +LVS R + +DLG G GF I
Sbjct: 9 DRYINPLVLDNPLRSLVSP--PNRILSR-------FVKYLKEDYTVVDLGCGPGFFTTIL 59
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITT-CDVISA 147
+ + V ++ + L+ VQK + + + Q+ + D + +
Sbjct: 60 ARIVK-----TVYAVDPDERAIRRLKEKVQKLSLNNVIPYVAPAQKLEFIKDKSIDFVFS 114
>gi|319740451|gb|ADV60519.1| arg methyltransferase [Acanthobrahmaea europaea]
gi|319740465|gb|ADV60526.1| arg methyltransferase [Mirina christophi]
Length = 244
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGATKVIAVECSN-IVDYARKIIEANRLSDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|289423905|ref|ZP_06425698.1| ribosomal protein L11 methyltransferase [Peptostreptococcus
anaerobius 653-L]
gi|289155682|gb|EFD04354.1| ribosomal protein L11 methyltransferase [Peptostreptococcus
anaerobius 653-L]
Length = 314
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 6/85 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK--TA 122
+ + S+ D+G G G I I + + V I+ + + K
Sbjct: 171 LEKYVKEDSVVFDIGCGSG----ILGICAAKLGAKEVIGIDIDEVAVKVAKENIDKNHVG 226
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + + DV+ A
Sbjct: 227 SNMTAIKGNLADDIDPSKKADVVVA 251
>gi|257464184|ref|ZP_05628564.1| precorrin-8W decarboxylase [Fusobacterium sp. D12]
gi|317061701|ref|ZP_07926186.1| precorrin-8W decarboxylase [Fusobacterium sp. D12]
gi|313687377|gb|EFS24212.1| precorrin-8W decarboxylase [Fusobacterium sp. D12]
Length = 188
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ L P SI ID+G+G G GI + L G V IE + K + +K
Sbjct: 24 SIAKLMLKP-NSILIDVGAGTGTIGIEAATYLPQ---GKVYAIEKEEKGLQTIEENAKKF 79
Query: 122 AARG-KVFACRIQEAPQMITTCD 143
+ + + EA + D
Sbjct: 80 DLKNFTLLHGKAPEALPKVA-YD 101
>gi|297582016|ref|ZP_06943935.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297533711|gb|EFH72553.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 314
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ +Q +
Sbjct: 132 WLIEEPTRIMDLCTGSGCIAIACANAFPEAE---VDAIDISVDALQVAEQNIQDHGLEQQ 188
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 189 VFPIRSDLFRDLPQ--EQYDLIV 209
>gi|17562982|ref|NP_504052.1| hypothetical protein R08F11.4 [Caenorhabditis elegans]
gi|2088829|gb|AAB54246.1| Hypothetical protein R08F11.4 [Caenorhabditis elegans]
Length = 354
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 30/99 (30%), Gaps = 8/99 (8%)
Query: 56 IRHVEDSLRVF-------QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+H+ L +L +D+G GGGF + + + +++ E
Sbjct: 143 EKHIIPDLVPAIGNGIKEKLEAGGIRVLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAI 202
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMI-TTCDVIS 146
K A + + P + D++
Sbjct: 203 KAARLKKKSDGTDFENLEFVVADAAIMPSSWTDSFDLVI 241
>gi|152977514|ref|YP_001377031.1| HemK family modification methylase [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152026266|gb|ABS24036.1| modification methylase, HemK family [Bacillus cytotoxicus NVH
391-98]
Length = 283
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 23/81 (28%), Gaps = 4/81 (4%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
D+G+G G I ++ + V ++ + + A
Sbjct: 110 FGNQELHVADIGTGSGAISITLAL---ENQNLHVYTVDIAQESIEVAKQNATSLGANVTF 166
Query: 128 FACR-IQEAPQMITTCDVISA 147
+ + + DV+ +
Sbjct: 167 YHGDLLSPFYETGKKLDVVVS 187
>gi|289522593|ref|ZP_06439447.1| methyltransferase, UbiE/COQ5 family [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289504429|gb|EFD25593.1| methyltransferase, UbiE/COQ5 family [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 266
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
VF + +DLGSGGG + + + G V ++ + + +K
Sbjct: 67 VFADLKEGDVVLDLGSGGGIDAFLAAKIVGD--SGKVYGLDMTDDMLALAEENRKKAGLT 124
Query: 125 GKVF-ACRIQEAPQMITTCDVISA 147
F I++ P + DV+ +
Sbjct: 125 NVEFIKGYIEDIPLPDESVDVVIS 148
>gi|261493207|ref|ZP_05989734.1| tellurite resistance protein TehB [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261311057|gb|EEY12233.1| tellurite resistance protein TehB [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 290
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 19/130 (14%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+S + +L ++ ++KK NL + T + L +DLG
Sbjct: 80 LSDDLECQLAFYCKPEDYFAKKYNLTA--THSEV--------LNAVNYTK-GGKALDLGC 128
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEA--PQ 137
G G + ++ G V ++ + FL Y+++K A+ A I EA
Sbjct: 129 GRGRNALYLNLL-----GFDVTAVDHNQESIDFLNYMIEKEQAQNITAAVYDINEATIGS 183
Query: 138 MITTCDVISA 147
D+I +
Sbjct: 184 QNGEYDLIIS 193
>gi|260494287|ref|ZP_05814418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Fusobacterium sp. 3_1_33]
gi|260198433|gb|EEW95949.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Fusobacterium sp. 3_1_33]
Length = 383
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ V I+ K
Sbjct: 187 CIQLMREVEEPN-ILDIGSGSGAISIAIA---NELKSSSVTGIDINEKAIELAIENKTLN 242
Query: 122 AARGKVFAC-RIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 243 KIENVNFIESNLFEKLDKDFKYDLIVS 269
>gi|229086688|ref|ZP_04218856.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock3-44]
gi|228696635|gb|EEL49452.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock3-44]
Length = 243
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ ++ + E ++ ES V KT + R +
Sbjct: 5 RILELGCGTGYLTEQLAVSFPNAEIIAIDFAESMI--------AVAKTRNHVESVTFRCE 56
Query: 134 EAPQMI--TTCDVISARA 149
+ + + DVI + A
Sbjct: 57 DIEHLTLSESFDVIISSA 74
>gi|237808221|ref|YP_002892661.1| Methyltransferase type 11 [Tolumonas auensis DSM 9187]
gi|237500482|gb|ACQ93075.1| Methyltransferase type 11 [Tolumonas auensis DSM 9187]
Length = 255
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 16/109 (14%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ QL P +D G G GF + G V L + + + + +
Sbjct: 38 LAQLGDRPLRILDAGGGFGFFAQKLAAL-----GHDVTLCDLSADMLALAKEQIAEKKLT 92
Query: 125 GKV--FACRIQEAP-QMITTCDVISARAL----AD----LDTLLEYSFP 162
++ C IQ+ P + + D++ A+ A+ L LL Y P
Sbjct: 93 DRIRLVHCSIQDLPVHVHGSFDLVLCHAVVEWLAEPKQTLAGLLNYLKP 141
>gi|153004217|ref|YP_001378542.1| type 11 methyltransferase [Anaeromyxobacter sp. Fw109-5]
gi|152027790|gb|ABS25558.1| Methyltransferase type 11 [Anaeromyxobacter sp. Fw109-5]
Length = 217
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 35/124 (28%), Gaps = 25/124 (20%)
Query: 27 EKLEYFYFLF-----LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
E L+ + ++W K ++ L P + D G+G
Sbjct: 28 ENLDAYLARLEDPSRVEWQK---------PDEVV--------SALGLRP-GDVACDAGAG 69
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITT 141
G+ + + G V+ I+ + + L ++ +
Sbjct: 70 PGY--FAIRLARAVGPTGRVHAIDVDARMIALLEQRAREAGVTNVRPLHAPEGEGLPPEP 127
Query: 142 CDVI 145
CD I
Sbjct: 128 CDAI 131
>gi|50841566|ref|YP_054793.1| hypothetical protein PPA0075 [Propionibacterium acnes KPA171202]
gi|50839168|gb|AAT81835.1| hypothetical protein PPA0075 [Propionibacterium acnes KPA171202]
Length = 270
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 7/85 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V ++ S +D+G G G I + G V +++ S L ++
Sbjct: 57 AAVTEIVEPGSSVLDVGGGTGRFAIPLA-----QRGCRVTVLDRSEDMLSVLESSAEEKD 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
V + + D + A
Sbjct: 112 VEIDVVHQ--EWPADLGCQFDSVMA 134
>gi|50794195|ref|XP_423669.1| PREDICTED: similar to HMT1 hnRNP methyltransferase-like 3 protein,
partial [Gallus gallus]
Length = 369
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + I +D+GSG G I S+ + V IE + + + +++
Sbjct: 76 NSMYHNKHVFKDKIVLDVGSGTG----ILSMFAAKAGAKKVYGIECSS-ISDYSEKIIKA 130
Query: 121 TAARG--KVFACRIQEAPQMITTCDVISA 147
+F +++E + D+I +
Sbjct: 131 NHLDNIITIFKGKVEEVELPVDKVDIIIS 159
>gi|332185175|ref|ZP_08386924.1| methyltransferase domain protein [Sphingomonas sp. S17]
gi|332014899|gb|EGI56955.1| methyltransferase domain protein [Sphingomonas sp. S17]
Length = 278
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P +D+GSG G + ++ V+L S A R Q +
Sbjct: 36 AIAGVAPNRGRALDIGSGAGSTSLAIHAARPGLDVTGVDL--SPELVALARRRAEQASPD 93
Query: 124 RGKVFACRIQEAPQMITTCDVISAR 148
+ + D+ +R
Sbjct: 94 APRFVCGDAIAVAEREGLFDLFCSR 118
>gi|328886483|emb|CCA59722.1| acetyltransferase [Streptomyces venezuelae ATCC 10712]
Length = 414
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 35/107 (32%), Gaps = 17/107 (15%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P +DLG G G S L + G V ++ + LR
Sbjct: 32 LALCGQLPERPRVLDLGCGPG-----RSALLLAAAGAEVTAVDLHEPFLAELRESAAARG 86
Query: 123 ARGKVFACRI--QEAPQMITTCDVISA----------RALADLDTLL 157
G + R P + D++ A RALA+ LL
Sbjct: 87 LDGSIRTLRADMGALPFPDGSFDLVWAESSVFVLGFDRALAEWRRLL 133
>gi|332161452|ref|YP_004298029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|318605429|emb|CBY26927.1| methylase of polypeptide chain release factors [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665682|gb|ADZ42326.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
Length = 284
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P +DLG+G G + + + V ++ K + R+ +K A
Sbjct: 102 ALAHLPATPCRILDLGTGTGAIALALASERPD---FAVMGVDIKADAVALARHNAKKLAI 158
Query: 124 RGKVF 128
F
Sbjct: 159 NNVDF 163
>gi|303240941|ref|ZP_07327452.1| methyltransferase small [Acetivibrio cellulolyticus CD2]
gi|302591527|gb|EFL61264.1| methyltransferase small [Acetivibrio cellulolyticus CD2]
Length = 197
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G G G GI S S + V +I+ + ++
Sbjct: 47 LLINSIPQITGEILDIGCGYGVIGISLSRLFPSAK---VTMIDINERAVDLTTRNIKLNH 103
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A A + + DVI +
Sbjct: 104 ANN-AGALQSDGFINVTGMFDVIVS 127
>gi|260767691|ref|ZP_05876626.1| hypothetical adenine-specific methylase yfcB [Vibrio furnissii CIP
102972]
gi|260617200|gb|EEX42384.1| hypothetical adenine-specific methylase yfcB [Vibrio furnissii CIP
102972]
gi|315179477|gb|ADT86391.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio furnissii NCTC 11218]
Length = 310
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ +Q +
Sbjct: 128 WLINEPTRIMDLCTGSGCIAIACAHAFPDAE---VDAIDISADALQVAEQNIQDHGLEQQ 184
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 185 VFPIRSDLFRDLPQ--APYDIIV 205
>gi|258621119|ref|ZP_05716153.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258586507|gb|EEW11222.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 314
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ +Q +
Sbjct: 132 WLIEEPTRIMDLCTGSGCIAIACANAFPEAE---VDAIDISVDALQVAEQNIQDHGLEQQ 188
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 189 VFPIRSDLFRDLPQ--EQYDLIV 209
>gi|242310141|ref|ZP_04809296.1| ribosomal protein L11 methyltransferase [Helicobacter pullorum MIT
98-5489]
gi|239523438|gb|EEQ63304.1| ribosomal protein L11 methyltransferase [Helicobacter pullorum MIT
98-5489]
Length = 275
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA- 122
+ ++ +D+G G G + + G V ++ + +QK
Sbjct: 135 ALSKIDLEGKRLLDVGCGSGILSLA-----AKKSGANVWCCDTDEVAIIATKDNMQKNGV 189
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
KVF I + + DV+ A
Sbjct: 190 VLDKVFLGTIDKITSEKGSFDVVVA 214
>gi|229582474|ref|YP_002840873.1| Methyltransferase type 11 [Sulfolobus islandicus Y.N.15.51]
gi|238619204|ref|YP_002914029.1| Methyltransferase type 11 [Sulfolobus islandicus M.16.4]
gi|228013190|gb|ACP48951.1| Methyltransferase type 11 [Sulfolobus islandicus Y.N.15.51]
gi|238380273|gb|ACR41361.1| Methyltransferase type 11 [Sulfolobus islandicus M.16.4]
Length = 189
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 16/120 (13%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + +LVS R + +DLG G GF I
Sbjct: 9 DRYINPLVLDNPLRSLVSP--PNRILSR-------FVKYLKEDYTVVDLGCGPGFFTTIL 59
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITT-CDVISA 147
+ + V ++ + L+ VQK + + + Q+ + D + +
Sbjct: 60 ARIVK-----TVYAVDPDERAIRRLKEKVQKLSLNNVIPYVAPAQKLEFIKDKSIDFVFS 114
>gi|120401137|ref|YP_950966.1| type 11 methyltransferase [Mycobacterium vanbaalenii PYR-1]
gi|119953955|gb|ABM10960.1| Methyltransferase type 11 [Mycobacterium vanbaalenii PYR-1]
Length = 236
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 6/80 (7%)
Query: 69 HPYPSIWIDLGSGGG-FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+GSG G G + V++ E +A V +
Sbjct: 77 VPVGGTALDVGSGPGNVTGALGRAVGPGGLALGVDISEPMLARA-----VRAEAGPNVGF 131
Query: 128 FACRIQEAPQMITTCDVISA 147
Q P + D + +
Sbjct: 132 IRADAQHLPFRDESFDAVVS 151
>gi|330985846|gb|EGH83949.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 269
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L P W+DLGSG G+ SS EG +++ E LR+ Q
Sbjct: 45 LSRLPAQFSPVRWLDLGSGTGYFSRALDQVFSSSEGIALDIAEGM------LRHA-QPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ A + P +C +I + L ++ +
Sbjct: 98 GAQHIVAGDAEHLPLRDQSCGLI----FSSLAV--QWCADF 132
>gi|329923979|ref|ZP_08279283.1| methyltransferase domain protein [Paenibacillus sp. HGF5]
gi|328940938|gb|EGG37245.1| methyltransferase domain protein [Paenibacillus sp. HGF5]
Length = 201
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ Q + + +G+G FP + V ++ + + R + + R
Sbjct: 33 LLQGVEGKVLEVAVGAGANFP-------FYHPDTVDVTAVDFSPEMLTRARQMASELGIR 85
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
I+ + D + +
Sbjct: 86 ATFLERDIETLELPERSYDCVVS 108
>gi|327273289|ref|XP_003221413.1| PREDICTED: protein arginine N-methyltransferase 8-like [Anolis
carolinensis]
Length = 635
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRY 116
+S+ + + +D+GSG G + + + +E ++ K KA+ L +
Sbjct: 342 NSMYHNKHVFKDKVVLDVGSGTGILSMFAAKAGAKKVYGVECSSISDYSEKIIKANHLDH 401
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ +F +++E + D+I +
Sbjct: 402 II-------TIFKGKVEEVELPVEKVDIIIS 425
>gi|321441963|gb|ADW85396.1| arg methyltransferase [Apoda biguttata]
Length = 244
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIVEANRLSDI 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|163815235|ref|ZP_02206612.1| hypothetical protein COPEUT_01395 [Coprococcus eutactus ATCC 27759]
gi|158449430|gb|EDP26425.1| hypothetical protein COPEUT_01395 [Coprococcus eutactus ATCC 27759]
Length = 452
Score = 35.1 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 62 SLRVFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L V + +D+ + G + ++ S G V + +KK + +++
Sbjct: 245 CLAVKAAGINEGDLVVDVCAAPGGKTMYAAMLTGS--EGHVISRDLTDKKTELIEENIER 302
Query: 121 TAARGKV--FACRIQEAPQMITTCDVISA 147
+ ++ DV+ A
Sbjct: 303 LGLSNVTVQVHDAREFDEELTGKADVVIA 331
>gi|260172133|ref|ZP_05758545.1| putative protoporphyrinogen oxidase [Bacteroides sp. D2]
gi|315920442|ref|ZP_07916682.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694317|gb|EFS31152.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 278
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +P +D+G+G G I +L ++ V + + + R + A
Sbjct: 103 IVKENPNARHLLDIGTGSGCIAISLDKKLPDVD---VEAWDISEEALAIARKNNEDLEAG 159
Query: 125 GKVFACRI-QEAPQMITTCDVISA 147
+ + + + + + DVI +
Sbjct: 160 VRFLQRDVLSDDWEKVPSFDVIVS 183
>gi|254414464|ref|ZP_05028230.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
7420]
gi|196178694|gb|EDX73692.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
7420]
Length = 264
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 13/87 (14%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSS-----IEGGLVNLIESKNKKASFLRYVVQ 119
+ + PS +DLG G G ++ ++ LI + K +
Sbjct: 81 ITTIENQPSRILDLGCGTGSTTLMLKQAFPEAVVIGLDLSPYMLIVADYK--------AE 132
Query: 120 KTAARGKVFACRIQEAPQMITTCDVIS 146
+ + + A + D+++
Sbjct: 133 QAGLDIQWQHGLAEAAGFDDASFDLVT 159
>gi|188997449|ref|YP_001931700.1| periplasmic solute binding protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932516|gb|ACD67146.1| periplasmic solute binding protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 294
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 21/126 (16%)
Query: 34 FLFLKWSKKI-NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS-- 90
W+ K+ NL + H ++F I + + PGI +
Sbjct: 176 EKLAVWNSKMANLKGVK----VYQYH-----KLFDYFLKRYGIISVDTIEPLPGIPPTAK 226
Query: 91 -----IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF---ACRIQEAPQMITTC 142
I + E + L + +Y+ +KT + V ++EA + +
Sbjct: 227 HLEELISKAKSENVKMILQD-VYHPIKPAKYLSEKTGLKIVVLPHDVGTVEEAKDIFSLF 285
Query: 143 DVISAR 148
D I R
Sbjct: 286 DTIVER 291
>gi|126332202|ref|XP_001368197.1| PREDICTED: similar to Protein arginine methyltransferase 3
[Monodelphis domestica]
Length = 537
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G + + + + V+ E + +R + K
Sbjct: 257 PHIFKDKVVLDVGCGTGILSMFAAKAGAK-QVIGVDQSEIIYQAMDIIR--LNKLEGIIT 313
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ RI+E + DVI +
Sbjct: 314 LVKGRIEEVDLPVEKVDVIIS 334
>gi|86741536|ref|YP_481936.1| glucose 1-dehydrogenase [Frankia sp. CcI3]
gi|86568398|gb|ABD12207.1| glucose 1-dehydrogenase [Frankia sp. CcI3]
Length = 245
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 13/81 (16%)
Query: 32 FYFL-FLKWSKKI--NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ L +W++ + NL ++ H+ + L I++GSG G G+
Sbjct: 101 YAQLPLDEWTQVLTTNLTAT---------HLV-TQGALSLLGDSGSVINIGSGSGVVGLP 150
Query: 89 TSIQLSSIEGGLVNLIESKNK 109
++ + GL+ L S +K
Sbjct: 151 LRAHYTAAKTGLIGLTRSLSK 171
>gi|91782418|ref|YP_557624.1| putative methyltransferase [Burkholderia xenovorans LB400]
gi|91686372|gb|ABE29572.1| Putative methyltransferase [Burkholderia xenovorans LB400]
Length = 250
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 11/105 (10%), Positives = 32/105 (30%), Gaps = 10/105 (9%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L S + +R + +++ + +D+G G G + V
Sbjct: 19 LTSPTHATGADLRTLAEAIAATP----DATVLDMGCGAGHASFAVA-----PHAKAVVAY 69
Query: 105 ESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+ + + + ++ + + P + D + +R
Sbjct: 70 DIAPQMLATVEGAAKERGLANIRTQQGAAEVLPFADHSFDWVISR 114
>gi|301618678|ref|XP_002938739.1| PREDICTED: protein arginine N-methyltransferase 8-like [Xenopus
(Silurana) tropicalis]
Length = 609
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + + +D+GSG G I S+ + V IE + + + +++
Sbjct: 316 NSMYHNKHVFKDKVVLDVGSGTG----ILSMFAAKAGARKVYGIECSS-VSDYSEKIIKA 370
Query: 121 TAARG--KVFACRIQEAPQMITTCDVIS 146
+F +++E + D+I
Sbjct: 371 NHLDNIITIFRGKVEEVELPVDKVDIII 398
>gi|297157652|gb|ADI07364.1| hypothetical protein SBI_04243 [Streptomyces bingchenggensis BCW-1]
Length = 217
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 12/93 (12%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P P+ +D+G G G + + G V ++ + R + G
Sbjct: 45 PAPARVLDVGCGTGSLTHLLAAA-----GHHVTGVDLSPRMVDQARAKLTAAGLTGTFLV 99
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P D + R L ++ P
Sbjct: 100 GDAAQPPTGEDRFDALLCR-------HLLWTLP 125
>gi|291562843|emb|CBL41659.1| Predicted O-methyltransferase [butyrate-producing bacterium SS3/4]
Length = 245
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L F +DLG+G G I + + EG + +E +++ A ++
Sbjct: 37 LSGFAAVKPGERVLDLGTGTGI--IPL-LLSAKTEGEHFSALEIQDEIARMAERSIKLNH 93
Query: 123 A--RGKVFACRIQEAPQMIT--TCDVIS 146
+ ++ I+EA ++ + DV++
Sbjct: 94 LEEKIEIVHGDIKEASRIFGAASFDVVT 121
>gi|262301079|gb|ACY43132.1| arg methyltransferase [Neogonodactylus oerstedii]
Length = 244
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQKTAARG 125
+ + +D+G G G I S+ + V IE S K + + +VQ
Sbjct: 18 RHLFRGKVVLDVGCGTG----ILSMFAAKAGASKVYGIEMSNIVKHA--KKIVQANNLEN 71
Query: 126 KV--FACRIQEAPQMITTCDVISA 147
V +++E + D+I +
Sbjct: 72 VVTIIQGKVEEVSLPVEKVDIIIS 95
>gi|291614646|ref|YP_003524803.1| methyltransferase type 11 [Sideroxydans lithotrophicus ES-1]
gi|291584758|gb|ADE12416.1| Methyltransferase type 11 [Sideroxydans lithotrophicus ES-1]
Length = 270
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Query: 44 NLVS--SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV 101
NLV+ + D S +D+ G G + + + G V
Sbjct: 13 NLVADGYAETTMLVFEQFADEAIAASNLKPNSTVLDVACGPGTLALRLA-----QQAGQV 67
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQMITTCDVISA 147
+ I+ + R +++ R C Q P T D +
Sbjct: 68 HGIDFSEAMLAIFRNKIEQAGHRNIALHCGDAQTLPYADATFDAAFS 114
>gi|154149936|ref|YP_001403554.1| methyltransferase type 11 [Candidatus Methanoregula boonei 6A8]
gi|153998488|gb|ABS54911.1| Methyltransferase type 11 [Methanoregula boonei 6A8]
Length = 278
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G + + + + G V I+ R ++K F R
Sbjct: 45 GMHVLDVGCGSGDVSHLLAKLVG--KEGHVIGIDRDGPSLEIARDRIRKLDLPNITFIQR 102
Query: 132 -IQEAPQMITTCDVISAR 148
I E D AR
Sbjct: 103 DICELSPEPGQFDAAVAR 120
>gi|86134230|ref|ZP_01052812.1| methyltransferase [Polaribacter sp. MED152]
gi|85821093|gb|EAQ42240.1| methyltransferase [Polaribacter sp. MED152]
Length = 273
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 14/96 (14%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+++ RH+ +D+G G G + EG V+LIE K
Sbjct: 36 IKELLTRHI---------SKPNCTIVDVGGGTGKYSEWLA-----KEGHDVHLIEPVAKH 81
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ K + V + P D++
Sbjct: 82 IKLAQKRAYKLKNKFTVTLGEARNLPLKPELADIVI 117
>gi|332160694|ref|YP_004297271.1| hypothetical protein YE105_C1072 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604566|emb|CBY26064.1| sam-dependent methyltransferase YafE (UbiE paralog) [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664924|gb|ADZ41568.1| hypothetical protein YE105_C1072 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862487|emb|CBX72644.1| uncharacterized protein yafE [Yersinia enterocolitica W22703]
Length = 256
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 7/87 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ Q H + +DLG G G + V + + +
Sbjct: 38 ATLLQPH-GDAHLLDLGCGAGHASFTAAAA-----VESVVSYDLSAQMLDVVSQAATDKK 91
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+V + P + D++ +R
Sbjct: 92 LTNIEVKQGLAESLPFDDQSFDIVISR 118
>gi|294155814|ref|YP_003560198.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145]
gi|291600378|gb|ADE19874.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145]
Length = 241
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 17/113 (15%)
Query: 40 SKKIN-----LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS 94
+ KIN L+ E+ + S +DL G GF GI
Sbjct: 45 NVKINIQKNVLIPRYETEELI---FL----ALKNIKNDSKVLDLCCGSGFIGIALKFNNK 97
Query: 95 SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ V L + + + + KV + + D I +
Sbjct: 98 NLQ---VTLSDIDDNAIE--QSKINTLENNVKVKIIKSDLFENIDEKFDCIIS 145
>gi|261855171|ref|YP_003262454.1| methyltransferase small [Halothiobacillus neapolitanus c2]
gi|261835640|gb|ACX95407.1| methyltransferase small [Halothiobacillus neapolitanus c2]
Length = 196
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 28/105 (26%), Gaps = 11/105 (10%)
Query: 45 LVSSSTVEDF--WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
L S +++ + D +DLG G G G+ + + V
Sbjct: 33 LFSPREIDEGTRLLMGFLD------APEPGQTIVDLGCGYGPIGLALAKAQPKAD---VI 83
Query: 103 LIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
L++ F ++ V D I +
Sbjct: 84 LLDKDFVACEFAASNAKRNQLNNVVVKPSNGLDALRGQHVDRIVS 128
>gi|190894546|ref|YP_001984839.1| putative methyltransferase [Rhizobium etli CIAT 652]
gi|190700207|gb|ACE94289.1| putative methyltransferase protein [Rhizobium etli CIAT 652]
Length = 259
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 34/125 (27%), Gaps = 24/125 (19%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGF 84
L++ +++ + ++ LR+ +D+G G G
Sbjct: 2 ALDRADFYDAELARHNQH--------------------LRIAAGVGRGDRVLDIGCGAGQ 41
Query: 85 PGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-ACRIQEAPQMITTCD 143
+ E V + + R R VF Q + + D
Sbjct: 42 TTREAARAAPQGEAVGV---DVLAEMLEVARQRSAAEGLRNVVFEQADAQFHAFLPASFD 98
Query: 144 VISAR 148
+ +R
Sbjct: 99 LCISR 103
>gi|204927633|ref|ZP_03218834.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204322975|gb|EDZ08171.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 277
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|167553920|ref|ZP_02347663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|168462749|ref|ZP_02696680.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195633874|gb|EDX52226.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|205321752|gb|EDZ09591.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 277
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|171462957|ref|YP_001797070.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171192495|gb|ACB43456.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 280
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + P+ +DLG+G G I +I +V + N+ + ++
Sbjct: 104 LQEIRRLNAPTRILDLGTGSG--AIALAIAH-EAPQAMVTATDQSNQALDIAKTNAKQLM 160
Query: 123 ARGKV--FACRIQEAPQMITTCDVISA 147
+V EA + D+I +
Sbjct: 161 LTNQVEFLQGSWYEAIEGNAPFDIILS 187
>gi|119961880|ref|YP_947365.1| methyltransferase small subunit [Arthrobacter aurescens TC1]
gi|119948739|gb|ABM07650.1| putative methyltransferase small domain protein [Arthrobacter
aurescens TC1]
Length = 204
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 21/82 (25%), Gaps = 5/82 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+G G G + + V+ ++ + +
Sbjct: 54 VPPPSPKGHLLDIGCGWGPIALTLGLMAPHAH---VHAVDVNERCIALTNENATALGLTN 110
Query: 126 KVFACRIQEAPQMITTCDVISA 147
+ + P + D I +
Sbjct: 111 VAASLPHEVDPAV--EFDTIWS 130
>gi|94264031|ref|ZP_01287831.1| UbiE/COQ5 methyltransferase [delta proteobacterium MLMS-1]
gi|93455542|gb|EAT05729.1| UbiE/COQ5 methyltransferase [delta proteobacterium MLMS-1]
Length = 307
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
I +DLGSGGGF + + E G V ++ + S R K+ R F
Sbjct: 119 LKAGEIVLDLGSGGGFDCFLAA--RQVGETGRVIGVDMTPEMISQARANATKSGDRNVEF 176
Query: 129 A-CRIQEAPQMITTCDVISA 147
I+ P DVI +
Sbjct: 177 RLGEIENLPVADGAVDVIIS 196
>gi|16765116|ref|NP_460731.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|62180339|ref|YP_216756.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161613729|ref|YP_001587694.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167993218|ref|ZP_02574313.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168237829|ref|ZP_02662887.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168820513|ref|ZP_02832513.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|194443667|ref|YP_002041025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194735200|ref|YP_002114805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197265643|ref|ZP_03165717.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198245434|ref|YP_002215370.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|207856718|ref|YP_002243369.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|224583735|ref|YP_002637533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|17865746|sp|P40816|HEMK_SALTY RecName: Full=Protein methyltransferase hemK; AltName:
Full=M.StyLTHemKP; AltName:
Full=Protein-(glutamine-N(5)) MTase hemK; AltName:
Full=Protein-glutamine N-methyltransferase hemK
gi|16420305|gb|AAL20690.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62127972|gb|AAX65675.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161363093|gb|ABX66861.1| hypothetical protein SPAB_01454 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402330|gb|ACF62552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194710702|gb|ACF89923.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197243898|gb|EDY26518.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197289229|gb|EDY28596.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197939950|gb|ACH77283.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205328672|gb|EDZ15436.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205342641|gb|EDZ29405.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|206708521|emb|CAR32842.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|224468262|gb|ACN46092.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|261246961|emb|CBG24778.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267993723|gb|ACY88608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301158299|emb|CBW17798.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312912764|dbj|BAJ36738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|320085724|emb|CBY95502.1| possible protoporphyrinogen oxidase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224403|gb|EFX49466.1| protein-glutamine-N5 methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|322616771|gb|EFY13679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322620419|gb|EFY17285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322625679|gb|EFY22498.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322626129|gb|EFY22939.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322633736|gb|EFY30476.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322638890|gb|EFY35583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322640873|gb|EFY37522.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322644094|gb|EFY40639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322649165|gb|EFY45603.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322655324|gb|EFY51632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322660918|gb|EFY57149.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322662785|gb|EFY58992.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322667969|gb|EFY64128.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322674269|gb|EFY70363.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322678550|gb|EFY74608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322683209|gb|EFY79225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322686903|gb|EFY82881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|322714813|gb|EFZ06384.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323130045|gb|ADX17475.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
gi|323195207|gb|EFZ80387.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323200202|gb|EFZ85288.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323204530|gb|EFZ89534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323207353|gb|EFZ92301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323213948|gb|EFZ98717.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323217338|gb|EGA02057.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323228021|gb|EGA12166.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231360|gb|EGA15473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323235800|gb|EGA19879.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323240369|gb|EGA24412.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323245261|gb|EGA29261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323249066|gb|EGA32986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323252823|gb|EGA36659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323254892|gb|EGA38686.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323266734|gb|EGA50220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323268941|gb|EGA52397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
gi|326623116|gb|EGE29461.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Dublin str.
3246]
gi|332988662|gb|AEF07645.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 277
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|330970889|gb|EGH70955.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 269
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLGSG G+ + S EG +++ E LR+ Q
Sbjct: 45 LARLPAQCKPSRWLDLGSGTGYFSRALAQTFSGSEGIALDIAEGM------LRHA-QPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P +C +I + L ++ +
Sbjct: 98 GAQHFVAGDAEHLPLREQSCGLI----FSSLAV--QWCADF 132
>gi|238913675|ref|ZP_04657512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
Length = 277
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|219853069|ref|YP_002467501.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
gi|219547328|gb|ACL17778.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
Length = 267
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 11/85 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P + +DLG G G I + + V ++ + L+ ++
Sbjct: 48 FQPSGATVLDLGCGYGSLSIPLARAGAE-----VTSLDISSGMLDRLKETAEREGLHINP 102
Query: 128 FAC-----RIQEAPQMITTCDVISA 147
C I E D++ A
Sbjct: 103 VECSWWSADIDELG-FRNKFDLVIA 126
>gi|164687443|ref|ZP_02211471.1| hypothetical protein CLOBAR_01084 [Clostridium bartlettii DSM
16795]
gi|164603217|gb|EDQ96682.1| hypothetical protein CLOBAR_01084 [Clostridium bartlettii DSM
16795]
Length = 402
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 25/80 (31%), Gaps = 6/80 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF-A 129
+DLG G + + E + ++ K + QK + F A
Sbjct: 99 DGKKILDLGCDNGITTCFIANLYPNSE---IIGVDKCKKGIKCAEEIAQKLGVKNVKFEA 155
Query: 130 CRIQEAPQMI--TTCDVISA 147
++ + D++ +
Sbjct: 156 VDAKKVDKFFKEEKFDLVLS 175
>gi|160885547|ref|ZP_02066550.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483]
gi|299147399|ref|ZP_07040464.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides sp. 3_1_23]
gi|156109169|gb|EDO10914.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483]
gi|298514677|gb|EFI38561.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides sp. 3_1_23]
Length = 278
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +P +D+G+G G I +L ++ V + + + R + A
Sbjct: 103 IVKENPNARHLLDIGTGSGCIAISLDKKLPDVD---VEAWDISEEALAIARKNNEDLEAG 159
Query: 125 GKVFACRI-QEAPQMITTCDVISA 147
+ + + + + + DVI +
Sbjct: 160 VRFLQRDVLSDDWEKVPSFDVIVS 183
>gi|154148405|ref|YP_001406871.1| methyltransferase small [Campylobacter hominis ATCC BAA-381]
gi|153804414|gb|ABS51421.1| methyltransferase small [Campylobacter hominis ATCC BAA-381]
Length = 235
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G+G G G++ + + ++L+E +++ LR V + ++
Sbjct: 33 GGKILDVGAGCGILGLLLA---RDFKNFKISLLEIQSENFQILRKNVTENELDCEILIND 89
Query: 132 IQEAPQMITTCDVISA 147
E D I +
Sbjct: 90 FNEFL-TSQKFDFIVS 104
>gi|110680313|ref|YP_683320.1| HemK family modification methylase [Roseobacter denitrificans OCh
114]
gi|109456429|gb|ABG32634.1| modification methylase, HemK family, putative [Roseobacter
denitrificans OCh 114]
Length = 271
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL L + +DLG G G + + G V+L E+ +AS V+ +
Sbjct: 93 SLIEVALSAPFNTVLDLGVGSGCLIVTLLAERPDATGVAVDLSEAACLQASA-NAVLHEV 151
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
A R +V +A + D+I +
Sbjct: 152 ADRVQVLKSDWFDAVE--GRFDLIVS 175
>gi|42524225|ref|NP_969605.1| hypothetical protein Bd2815 [Bdellovibrio bacteriovorus HD100]
gi|39576433|emb|CAE80598.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 233
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 3/90 (3%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H S + + P S + +G G G + + V+ + R
Sbjct: 32 HFL-STLILKDLPEESEILCVGVGTGAEIMTLAEAFPQWRFVGVDPSANMLDVCRE-RMT 89
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
A R + +Q+AP + + +
Sbjct: 90 KAGYANRCEFIHGYVQDAPTDR-KFEAVVS 118
>gi|33594691|ref|NP_882335.1| ubiE/COQ5 methyltransferase family protein [Bordetella pertussis
Tohama I]
gi|33603429|ref|NP_890989.1| ubiE/COQ5 methyltransferase family protein [Bordetella
bronchiseptica RB50]
gi|33564767|emb|CAE44093.1| ubiE/COQ5 methyltransferase family protein [Bordetella pertussis
Tohama I]
gi|33577553|emb|CAE34818.1| ubiE/COQ5 methyltransferase family protein [Bordetella
bronchiseptica RB50]
gi|332384102|gb|AEE68949.1| ubiE/COQ5 methyltransferase family protein [Bordetella pertussis
CS]
Length = 257
Score = 35.1 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKT 121
+ + HP + +DLG+GGG + + E +L +S + ++
Sbjct: 38 AAIAREHP-GARLLDLGTGGGHVSFHVA---PHVAEVVAYDLSQSMLDVVA--GEAARRG 91
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR 148
A + + + P D++ +R
Sbjct: 92 LANLRTCRGKAEALPFGDGEFDLVMSR 118
>gi|326482123|gb|EGE06133.1| HNRNP arginine N-methyltransferase [Trichophyton equinum CBS
127.97]
Length = 348
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ R D++ + + +D+G G G + +++ + V++ K
Sbjct: 43 KDEVRTRSYRDAIYNSKHLFKDKVVLDVGCGTGILSM-FAVKAGAKHVIGVDMSSIIGKA 101
Query: 111 ASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
R +V+ K+ +++E D+I +
Sbjct: 102 ----REIVEANGMSDKITLLQGKMEEVELPFPKVDIIIS 136
>gi|326476436|gb|EGE00446.1| HNRNP arginine N-methyltransferase [Trichophyton tonsurans CBS
112818]
Length = 348
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ R D++ + + +D+G G G + +++ + V++ K
Sbjct: 43 KDEVRTRSYRDAIYNSKHLFKDKVVLDVGCGTGILSM-FAVKAGAKHVIGVDMSSIIGKA 101
Query: 111 ASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
R +V+ K+ +++E D+I +
Sbjct: 102 ----REIVEANGMSDKITLLQGKMEEVELPFPKVDIIIS 136
>gi|327307148|ref|XP_003238265.1| HNRNP arginine N-methyltransferase [Trichophyton rubrum CBS 118892]
gi|326458521|gb|EGD83974.1| HNRNP arginine N-methyltransferase [Trichophyton rubrum CBS 118892]
Length = 348
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ R D++ + + +D+G G G + +++ + V++ K
Sbjct: 43 KDEVRTRSYRDAIYNSKHLFKDKVVLDVGCGTGILSM-FAVKAGAKHVIGVDMSSIIGKA 101
Query: 111 ASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
R +V+ K+ +++E D+I +
Sbjct: 102 ----REIVEANGMSDKITLLQGKMEEVELPFPKVDIIIS 136
>gi|322515350|ref|ZP_08068346.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus ureae ATCC
25976]
gi|322118637|gb|EFX90859.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus ureae ATCC
25976]
Length = 329
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + + A G V A
Sbjct: 190 KGKILDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRRTLAENALEGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSHIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|315055603|ref|XP_003177176.1| HNRNP arginine N-methyltransferase [Arthroderma gypseum CBS 118893]
gi|311339022|gb|EFQ98224.1| HNRNP arginine N-methyltransferase [Arthroderma gypseum CBS 118893]
Length = 348
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ R D++ + + +D+G G G + +++ + V++ K
Sbjct: 43 KDEVRTRSYRDAIYNSKHLFKDKVVLDVGCGTGILSM-FAVKAGAKHVIGVDMSSIIGKA 101
Query: 111 ASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
R +V+ K+ +++E D+I +
Sbjct: 102 ----REIVEANGMSDKITLLQGKMEEVELPFPKVDIIIS 136
>gi|302660692|ref|XP_003022022.1| hypothetical protein TRV_03839 [Trichophyton verrucosum HKI 0517]
gi|291185948|gb|EFE41404.1| hypothetical protein TRV_03839 [Trichophyton verrucosum HKI 0517]
Length = 349
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ R D++ + + +D+G G G + +++ + V++ K
Sbjct: 44 KDEVRTRSYRDAIYNSKHLFKDKVVLDVGCGTGILSM-FAVKAGAKHVIGVDMSSIIGKA 102
Query: 111 ASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
R +V+ K+ +++E D+I +
Sbjct: 103 ----REIVEANGMSDKITLLQGKMEEVELPFPKVDIIIS 137
>gi|271964060|ref|YP_003338256.1| type 11 methyltransferase [Streptosporangium roseum DSM 43021]
gi|270507235|gb|ACZ85513.1| methyltransferase type 11 [Streptosporangium roseum DSM 43021]
Length = 281
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D L +D+G G G + + + ++L ++A
Sbjct: 35 FNDHLLAAAAVGERDRVLDVGCGNGQVTRLAARRARLGHTTGIDLSAPMLRRARAC--AA 92
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ A Q P DV +R
Sbjct: 93 DEGVANVTFERGDAQIHPFPDAGFDVAVSR 122
>gi|238898679|ref|YP_002924360.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229466438|gb|ACQ68212.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 311
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
++++ L+ S + +F H L V H +D+ +G G I + E
Sbjct: 111 NEQV-LIPRSPIGEFIEDHFYGLLSVKPAH-----ILDMCTGSGCIAIACAEAFPEAE-- 162
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKV---FACRIQEAPQMITTCDVIS 146
V+ ++ + +++ +V ++ + P T D+I
Sbjct: 163 -VDAVDISRGALAVAECNIEQYGLENRVTPIYSDLFNDLP--RITYDLIV 209
>gi|170758199|ref|YP_001785612.1| alanine racemase [Clostridium botulinum A3 str. Loch Maree]
gi|169405188|gb|ACA53599.1| alanine racemase [Clostridium botulinum A3 str. Loch Maree]
Length = 404
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 11/49 (22%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + E +K FY+ + K+N I+H+ +S + L
Sbjct: 184 DYTNEQFKKFLDFYYKLRDKNVKVN-----------IKHIANSAALIDL 221
>gi|168260000|ref|ZP_02681973.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|205350947|gb|EDZ37578.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
Length = 277
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|149180507|ref|ZP_01859011.1| YodH [Bacillus sp. SG-1]
gi|148851660|gb|EDL65806.1| YodH [Bacillus sp. SG-1]
Length = 234
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 12/81 (14%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+D+G G G + S +E V L E K+ A +
Sbjct: 35 DGMSILDIGCGTGQTAVFIKEMFGSRVVALENHPVML-EKAGKRIL-------AAGAEVQ 86
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ + +E P D+I++
Sbjct: 87 LINGQAEEMPFANQEFDLITS 107
>gi|1045230|emb|CAA63163.1| N-methyl-transferase [Streptomyces alboniger]
Length = 228
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 18/103 (17%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L +++ V S+ + P ++++G G G + + + G V +
Sbjct: 45 LTAATE--------VMASIVPY---PKGGSFLEVGCGTGVISVTAA-----LHGSDVTAL 88
Query: 105 ESKNKKASFLRYVVQKTAA--RGKVFACRIQEAPQMITTCDVI 145
+ K + ++ R +V + A + D I
Sbjct: 89 DINEKAVANTLANAERHGVEDRVRVLHSDLYAALEPTDRFDAI 131
>gi|321442007|gb|ADW85418.1| arg methyltransferase [Lasiocampa quercus]
Length = 244
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +V+
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIVEANRLSDI 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|308186586|ref|YP_003930717.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1]
gi|308057096|gb|ADO09268.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1]
Length = 277
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L PS +D+G+G G + + + + V+ IE+ ++
Sbjct: 102 ALAHLPATPSTILDMGTGTGAIALALASERPDCQVTGVDRIEA---AVELAGSNAEQLNL 158
Query: 124 RGKVF 128
F
Sbjct: 159 SNTTF 163
>gi|307353052|ref|YP_003894103.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
gi|307156285|gb|ADN35665.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
Length = 254
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 35/113 (30%), Gaps = 15/113 (13%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ WI E V P +D+G G G G+I S G V I+
Sbjct: 33 EEKKLWIEAFE---AVLPAGNGPLDILDVGCGTGAMGLILSGM-----GHNVTGIDLSEG 84
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ R + T + + P T D + R L ++ P
Sbjct: 85 MMNIGRRKAKDTGLSMVFQSGDAENPPFEDGTFDCVINR-------HLLWTLP 130
>gi|256372570|ref|YP_003110394.1| modification methylase, HemK family [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009154|gb|ACU54721.1| modification methylase, HemK family [Acidimicrobium ferrooxidans
DSM 10331]
Length = 255
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +D+G+G G I +++ +E V + + + R V+ T A
Sbjct: 75 VLAAVRTGMRVLDVGTGSGAIAISLALEGPRLE---VTGSDVDPRALALARENVRATGAL 131
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ E + + DV+ A
Sbjct: 132 VTLVRRSWFEGAEP-ESLDVVVA 153
>gi|229578777|ref|YP_002837175.1| Methyltransferase type 11 [Sulfolobus islandicus Y.G.57.14]
gi|228009491|gb|ACP45253.1| Methyltransferase type 11 [Sulfolobus islandicus Y.G.57.14]
Length = 187
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 16/120 (13%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + +LVS R + +DLG G GF I
Sbjct: 9 DRYINPLVLDNPLRSLVSP--PNRILSR-------FVKYLKEDYTVVDLGCGPGFFTTIL 59
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITT-CDVISA 147
+ + V ++ + L+ VQK + + + Q+ + D + +
Sbjct: 60 ARIVK-----TVYAVDPDERAIRRLKEKVQKLSLNNVIPYVAPAQKLEFIKDKSIDFVFS 114
>gi|121714587|ref|XP_001274904.1| ubiE/COQ5 methyltransferase, putative [Aspergillus clavatus NRRL 1]
gi|119403058|gb|EAW13478.1| ubiE/COQ5 methyltransferase, putative [Aspergillus clavatus NRRL 1]
Length = 269
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 24/84 (28%), Gaps = 4/84 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +D+G G G + + + G V IE+ + R +
Sbjct: 29 AYLLPYFKPDLKILDIGCGPGSISLDFAKLVPQ---GHVTGIENVPDPLAEARALASTQG 85
Query: 123 ARGKVFA-CRIQEAPQMITTCDVI 145
F I + D++
Sbjct: 86 LTNIDFQVGDIHSLEFPDDSFDIV 109
>gi|115760358|ref|XP_001198852.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115949723|ref|XP_001184273.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 620
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 27/118 (22%)
Query: 44 NLVSSSTVEDFWIRH-----VEDSL-RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
NL W+ H S+ ++ + +DLG G G ++ + +
Sbjct: 406 NLSGR------WVLHHLVQDFIPSMPQIEEQMKSGIRILDLGCGRGLASLVFAENYPN-- 457
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAP----------QMITTCDVI 145
V ++ + ++ + ++ F C ++A I T DVI
Sbjct: 458 -STVVGLDFSEEAINYGKERAKEKGLTNVEFVC--EDAACIPDDWNNTIDYIYTFDVI 512
>gi|42781985|ref|NP_979232.1| UbiE/COQ5 family methlytransferase [Bacillus cereus ATCC 10987]
gi|42737909|gb|AAS41840.1| methlytransferase, UbiE/COQ5 family [Bacillus cereus ATCC 10987]
Length = 261
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG + + + ++L E + A +++ A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFQEV--VALDLTEKMLENAK--NFIISNGHENVSFVAG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + DVI+ R
Sbjct: 97 NAESLPFSDRSFDVITCR 114
>gi|332241113|ref|XP_003269731.1| PREDICTED: protein arginine N-methyltransferase 1-like [Nomascus
leucogenys]
Length = 319
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 84 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 139
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 140 ---TIIKGKVEEVELPVEKVDIIIS 161
>gi|303251779|ref|ZP_07337950.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307249080|ref|ZP_07531087.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307251279|ref|ZP_07533199.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|302649209|gb|EFL79394.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306854368|gb|EFM86564.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306856677|gb|EFM88813.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 329
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + + A G V A
Sbjct: 190 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRRTLAENALDGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSNIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|297277644|ref|XP_001113609.2| PREDICTED: protein arginine N-methyltransferase 1-like [Macaca
mulatta]
Length = 373
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|293341839|ref|XP_002725051.1| PREDICTED: protein arginine methyltransferase 1-like [Rattus
norvegicus]
gi|293353272|ref|XP_002728171.1| PREDICTED: protein arginine methyltransferase 1-like [Rattus
norvegicus]
Length = 353
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|281348347|gb|EFB23931.1| hypothetical protein PANDA_006261 [Ailuropoda melanoleuca]
Length = 342
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 55 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 110
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 111 ---TIIKGKVEEVELPVEKVDIIIS 132
>gi|229098586|ref|ZP_04229527.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock3-29]
gi|228684908|gb|EEL38845.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock3-29]
Length = 257
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ S ++ ES + + + F C
Sbjct: 35 RILELGCGTGYVTEKLSNLFPKAHITAIDFAESM------IAVAKTRPNVKNVTFHCEDI 88
Query: 134 EAPQMITTCDVISARA 149
E ++ + DVI + A
Sbjct: 89 ERLRLEESYDVIISNA 104
>gi|220912236|ref|YP_002487545.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
gi|219859114|gb|ACL39456.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
Length = 207
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 23/85 (27%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L +D+G G G + +++ + V ++ + +
Sbjct: 51 LAEVPAPAATGNLLDIGCGWGPIALTMALKAPHAQ---VYAVDVNERCIALTNGNAAALG 107
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A +A D I +
Sbjct: 108 LSN--VAASTPDAVDPAVQFDTIWS 130
>gi|205352557|ref|YP_002226358.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|205272338|emb|CAR37218.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326627617|gb|EGE33960.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 277
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|194388102|dbj|BAG65435.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|194381590|dbj|BAG58749.1| unnamed protein product [Homo sapiens]
Length = 293
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 60 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 115
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 116 ---TIIKGKVEEVELPVEKVDIIIS 137
>gi|170757299|ref|YP_001779928.1| alanine racemase [Clostridium botulinum B1 str. Okra]
gi|169122511|gb|ACA46347.1| alanine racemase [Clostridium botulinum B1 str. Okra]
Length = 404
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 11/49 (22%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ + E +K FY+ + K+N I+H+ +S + L
Sbjct: 184 DYTNEQFKKFLDFYYKLRDKNVKVN-----------IKHIANSAALIDL 221
>gi|167580194|ref|ZP_02373068.1| methlytransferase, UbiE/COQ5 family protein [Burkholderia
thailandensis TXDOH]
Length = 251
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 5/90 (5%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D+L + +DLG G G + V + + + +
Sbjct: 30 LDTLAAEIGATPGARVLDLGCGAGHASFAAA----RGGATEVIAYDLAPPMLATVEAAAR 85
Query: 120 KTAA-RGKVFACRIQEAPQMITTCDVISAR 148
+ ++ + P + D I +R
Sbjct: 86 ERGLASVRIEQGAAERLPFADASFDWIVSR 115
>gi|153811795|ref|ZP_01964463.1| hypothetical protein RUMOBE_02188 [Ruminococcus obeum ATCC 29174]
gi|149832198|gb|EDM87283.1| hypothetical protein RUMOBE_02188 [Ruminococcus obeum ATCC 29174]
Length = 242
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L+ +DLG G G+ + + + I+S K + + V
Sbjct: 30 WHQLQPLFPKLQGKKVLDLGCGYGWHCKYAA----QMGATEILGIDSSQKMIA--KAVAD 83
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ + K C ++E T D++ +
Sbjct: 84 NSDDKIKYKVCGVEEYIYPENTYDLVVS 111
>gi|148690831|gb|EDL22778.1| protein arginine N-methyltransferase 1, isoform CRA_c [Mus
musculus]
Length = 358
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 71 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 126
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 127 ---TIIKGKVEEVELPVEKVDIIIS 148
>gi|148690829|gb|EDL22776.1| protein arginine N-methyltransferase 1, isoform CRA_a [Mus
musculus]
gi|149056003|gb|EDM07434.1| heterogeneous nuclear ribonucleoproteins methyltransferase-like 2
(S. cerevisiae), isoform CRA_a [Rattus norvegicus]
Length = 342
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 55 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 110
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 111 ---TIIKGKVEEVELPVEKVDIIIS 132
>gi|119572903|gb|EAW52518.1| protein arginine methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 348
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 61 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 116
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 117 ---TIIKGKVEEVELPVEKVDIIIS 138
>gi|114762238|ref|ZP_01441706.1| 3-demethylubiquinone-9 3-methyltransferase [Pelagibaca bermudensis
HTCC2601]
gi|114545262|gb|EAU48265.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp.
HTCC2601]
Length = 250
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 22/76 (28%), Gaps = 5/76 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + V +++ + R +++
Sbjct: 60 EGLRIVDIGCGGGLLCEPMARLGAE-----VVGVDAAERNIPVARLHAEQSELEIDYRHT 114
Query: 131 RIQEAPQMITTCDVIS 146
+ DV+
Sbjct: 115 TAEALAAENELFDVVI 130
>gi|32425330|gb|AAH19268.2| PRMT1 protein [Homo sapiens]
Length = 352
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 65 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 120
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 121 ---TIIKGKVEEVELPVEKVDIIIS 142
>gi|154759421|ref|NP_001527.3| protein arginine N-methyltransferase 1 isoform 1 [Homo sapiens]
gi|73947042|ref|XP_851543.1| PREDICTED: similar to Protein arginine N-methyltransferase 1
isoform 2 [Canis familiaris]
gi|301764945|ref|XP_002917879.1| PREDICTED: protein arginine N-methyltransferase 1-like isoform 1
[Ailuropoda melanoleuca]
gi|119572904|gb|EAW52519.1| protein arginine methyltransferase 1, isoform CRA_b [Homo sapiens]
Length = 371
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 84 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 139
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 140 ---TIIKGKVEEVELPVEKVDIIIS 161
>gi|30354330|gb|AAH51953.1| Prmt1 protein [Mus musculus]
gi|38566059|gb|AAH62964.1| Prmt1 protein [Mus musculus]
Length = 354
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 67 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 122
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 123 ---TIIKGKVEEVELPVEKVDIIIS 144
>gi|30185908|gb|AAH51547.1| Prmt1 protein [Mus musculus]
Length = 350
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 63 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 118
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 119 ---TIIKGKVEEVELPVEKVDIIIS 140
>gi|26353886|dbj|BAC40573.1| unnamed protein product [Mus musculus]
Length = 343
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|161789011|sp|Q99873|ANM1_HUMAN RecName: Full=Protein arginine N-methyltransferase 1; AltName:
Full=Histone-arginine N-methyltransferase PRMT1;
AltName: Full=Interferon receptor 1-bound protein 4
gi|7453575|gb|AAF62893.1|AF222689_1 protein arginine N-methyltransferase 1-variant 2 [Homo sapiens]
Length = 361
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 74 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 129
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 130 ---TIIKGKVEEVELPVEKVDIIIS 151
>gi|7453577|gb|AAF62895.1|AF222689_3 protein arginine N-methyltransferase 1-variant 1 [Homo sapiens]
gi|133777381|gb|AAI09284.2| Protein arginine methyltransferase 1 [Homo sapiens]
gi|133777777|gb|AAI09283.2| Protein arginine methyltransferase 1 [Homo sapiens]
gi|167774149|gb|ABZ92509.1| protein arginine methyltransferase 1 [synthetic construct]
Length = 343
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|73947054|ref|XP_864071.1| PREDICTED: similar to heterogeneous nuclear ribonucleoproteins
methyltransferase-like 2 isoform 8 [Canis familiaris]
Length = 339
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|73947058|ref|XP_864112.1| PREDICTED: similar to heterogeneous nuclear ribonucleoproteins
methyltransferase-like 2 isoform 10 [Canis familiaris]
Length = 343
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|73947060|ref|XP_864131.1| PREDICTED: similar to Protein arginine N-methyltransferase 1
isoform 11 [Canis familiaris]
gi|73947062|ref|XP_864152.1| PREDICTED: similar to Protein arginine N-methyltransferase 1
isoform 12 [Canis familiaris]
Length = 350
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 63 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 118
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 119 ---TIIKGKVEEVELPVEKVDIIIS 140
>gi|73947052|ref|XP_864055.1| PREDICTED: similar to heterogeneous nuclear ribonucleoproteins
methyltransferase-like 2 isoform 7 [Canis familiaris]
Length = 285
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|62751532|ref|NP_001015624.1| protein arginine N-methyltransferase 1 [Bos taurus]
gi|151301219|ref|NP_938074.2| protein arginine N-methyltransferase 1 isoform 3 [Homo sapiens]
gi|73947040|ref|XP_533615.2| PREDICTED: similar to heterogeneous nuclear ribonucleoproteins
methyltransferase-like 2 isoform 1 [Canis familiaris]
gi|301764947|ref|XP_002917880.1| PREDICTED: protein arginine N-methyltransferase 1-like isoform 2
[Ailuropoda melanoleuca]
gi|59858507|gb|AAX09088.1| HMT1 hnRNP methyltransferase-like 2 isoform 3 [Bos taurus]
gi|81674789|gb|AAI09797.1| Protein arginine methyltransferase 1 [Bos taurus]
gi|90075032|dbj|BAE87196.1| unnamed protein product [Macaca fascicularis]
gi|119572906|gb|EAW52521.1| protein arginine methyltransferase 1, isoform CRA_d [Homo sapiens]
gi|296477478|gb|DAA19593.1| HMT1 hnRNP methyltransferase-like 2 [Bos taurus]
gi|307686215|dbj|BAJ21038.1| protein arginine methyltransferase 1 [synthetic construct]
Length = 353
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|73668021|ref|YP_304036.1| hypothetical protein Mbar_A0474 [Methanosarcina barkeri str.
Fusaro]
gi|72395183|gb|AAZ69456.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 252
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
++H +D LR+ L P +D+G G GF +I L+ ++ V ++ R
Sbjct: 34 VKHWQDELRLV-LDEKPLHVLDIGCGPGF----FTIMLARLKHN-VTSVDGAEGMVDRAR 87
Query: 116 YVVQKTAARGKVFACRIQEAPQMIT-TCDVISAR 148
++K A K++ + + D I +R
Sbjct: 88 INIKKEALNAKIYKSDAVLLDKEKENSLDAIVSR 121
>gi|74216746|dbj|BAE37781.1| unnamed protein product [Mus musculus]
Length = 345
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|34810283|pdb|1ORH|A Chain A, Structure Of The Predominant Protein Arginine
Methyltransferase Prmt1
Length = 353
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|34810278|pdb|1OR8|A Chain A, Structure Of The Predominant Protein Arginine
Methyltransferase Prmt1
Length = 340
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 53 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 108
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 109 ---TIIKGKVEEVELPVEKVDIIIS 130
>gi|9790109|ref|NP_062804.1| protein arginine N-methyltransferase 1 [Mus musculus]
gi|12229652|sp|Q9JIF0|ANM1_MOUSE RecName: Full=Protein arginine N-methyltransferase 1; AltName:
Full=Histone-arginine N-methyltransferase PRMT1
gi|7141326|gb|AAF37292.1|AF232716_1 protein arginine N-methyltransferase 1 [Mus musculus]
gi|148690832|gb|EDL22779.1| protein arginine N-methyltransferase 1, isoform CRA_d [Mus
musculus]
gi|149056004|gb|EDM07435.1| heterogeneous nuclear ribonucleoproteins methyltransferase-like 2
(S. cerevisiae), isoform CRA_b [Rattus norvegicus]
Length = 371
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 84 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 139
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 140 ---TIIKGKVEEVELPVEKVDIIIS 161
>gi|31615892|pdb|1ORI|A Chain A, Structure Of The Predominant Protein Arginine
Methyltransferase Prmt1
gi|12805545|gb|AAH02249.1| Prmt1 protein [Mus musculus]
Length = 343
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 56 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 111
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 112 ---TIIKGKVEEVELPVEKVDIIIS 133
>gi|73947064|ref|XP_864172.1| PREDICTED: similar to HMT1 hnRNP methyltransferase-like 2 isoform 2
isoform 13 [Canis familiaris]
gi|194215790|ref|XP_001917777.1| PREDICTED: protein arginine methyltransferase 1 [Equus caballus]
gi|7453576|gb|AAF62894.1|AF222689_2 protein arginine N-methyltransferase 1-variant 3 [Homo sapiens]
gi|47115153|emb|CAG28536.1| HRMT1L2 [Homo sapiens]
Length = 347
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 60 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 115
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 116 ---TIIKGKVEEVELPVEKVDIIIS 137
>gi|13242255|ref|NP_077339.1| protein arginine N-methyltransferase 1 [Rattus norvegicus]
gi|2499804|sp|Q63009|ANM1_RAT RecName: Full=Protein arginine N-methyltransferase 1; AltName:
Full=Histone-arginine N-methyltransferase PRMT1
gi|7141328|gb|AAF37293.1|AF232717_1 protein arginine N-methyltransferase 1 [Mus musculus]
gi|1390025|gb|AAC52622.1| protein arginine N-methyltransferase [Rattus norvegicus]
gi|51261196|gb|AAH78815.1| Protein arginine methyltransferase 1 [Rattus norvegicus]
gi|74147295|dbj|BAE27538.1| unnamed protein product [Mus musculus]
gi|149056005|gb|EDM07436.1| heterogeneous nuclear ribonucleoproteins methyltransferase-like 2
(S. cerevisiae), isoform CRA_c [Rattus norvegicus]
Length = 353
Score = 35.1 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|296434234|ref|NP_001171787.1| protein arginine N-methyltransferase 1-like [Saccoglossus
kowalevskii]
Length = 357
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--R 124
+ + +D+G G G I S+ + V IE + +++
Sbjct: 70 RHLFKDKVVLDVGCGTG----IMSMFAAKAGASKVIGIECSS-IVDLAEQIIKDNGLSDT 124
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 125 ITIVRGKVEEVELPVEKVDIIVS 147
>gi|292654740|ref|YP_003534637.1| methyltransferase [Haloferax volcanii DS2]
gi|291371192|gb|ADE03419.1| methyltransferase [Haloferax volcanii DS2]
Length = 266
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 35/128 (27%), Gaps = 22/128 (17%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
T + W DS +D+G G G + L+ V ++
Sbjct: 10 RRTRDGMWD----DSRAALGDLDLGGRTRILDVGCGTG----EFTRVLAEASEARVVGVD 61
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARAL--------ADLDTLL 157
+ L V + + A P + D++ +AL A L
Sbjct: 62 ADTD----LLSVASDRDSDIETVAGDATRLPFAAGSFDLVVCQALLVNLPDPTAALSEFA 117
Query: 158 EYSFPWLY 165
S +
Sbjct: 118 RVSSDLVA 125
>gi|200389878|ref|ZP_03216489.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199602323|gb|EDZ00869.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 277
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|164687613|ref|ZP_02211641.1| hypothetical protein CLOBAR_01254 [Clostridium bartlettii DSM
16795]
gi|164603387|gb|EDQ96852.1| hypothetical protein CLOBAR_01254 [Clostridium bartlettii DSM
16795]
Length = 255
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S +D+G G GF II S G V ++ + + +
Sbjct: 43 SNAPVFAGDRRLKVLDIGCGPGFFSIILSCA-----GYDVTAVDYTEEMLNKAKQNAGDL 97
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR 148
+ K D+I R
Sbjct: 98 KDKIKFRRMDAHNLEFDEGQFDLIVTR 124
>gi|297798634|ref|XP_002867201.1| coclaurine N-methyltransferase [Arabidopsis lyrata subsp. lyrata]
gi|297313037|gb|EFH43460.1| coclaurine N-methyltransferase [Arabidopsis lyrata subsp. lyrata]
Length = 355
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + I + L + SK +KA F+ +K +
Sbjct: 127 VEDGQSVLDVGCGWG--SLSLYIARKYSKCKLTGICNSKTQKA-FIDEKCRKLGLQNVEI 183
Query: 129 ACRIQEAPQMITTCDVISA 147
+ T D + +
Sbjct: 184 IVADISTFEHEGTYDRVFS 202
>gi|295395537|ref|ZP_06805731.1| methylase of polypeptide chain release factors [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971556|gb|EFG47437.1| methylase of polypeptide chain release factors [Brevibacterium
mcbrellneri ATCC 49030]
Length = 534
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 21/74 (28%), Gaps = 6/74 (8%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+DLG+G G I + V + + +F R A +
Sbjct: 174 TALDLGTGCGIQAIALA-----RHCDHVIATDISARALAFTRANATLNGAHN-IETREGS 227
Query: 134 EAPQMITTCDVISA 147
D+I +
Sbjct: 228 LFEPTPEQFDLIVS 241
>gi|284051466|ref|ZP_06381676.1| methyltransferase type 11 [Arthrospira platensis str. Paraca]
Length = 442
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 49/137 (35%), Gaps = 15/137 (10%)
Query: 15 LLNTYNVSRETLEKLE--YFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQ---LH 69
++N ++ R+ E+ + + + ++ S + + E +I ++ + +
Sbjct: 3 IINESDLQRKIREQFDFTQYPKIPVEESPQ------TDYERLYIHNLVTPYYLRNQQVIK 56
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +D G G G+ + ++ G + I+ R ++ F
Sbjct: 57 TEGKVILDAGCGSGYKALALALANP---GAKIVGIDISENSVEASRDRLKYHGIENAEFH 113
Query: 130 C-RIQEAPQMITTCDVI 145
I+E P + D I
Sbjct: 114 AMYIEELPSLGWEFDYI 130
>gi|118472123|ref|YP_884514.1| methyltransferase [Mycobacterium smegmatis str. MC2 155]
gi|118173410|gb|ABK74306.1| methyltransferase [Mycobacterium smegmatis str. MC2 155]
Length = 237
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 22/127 (17%)
Query: 28 KLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
KL L +++ LV+S+ W+R P +D+G G G
Sbjct: 54 KLYDRAQLL---NRR--LVASTRPPVEWLR-----------IPPGGTVLDIGCGPGNITA 97
Query: 88 ITSIQLS-SIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ V++ E +A V + + Q+ P D +
Sbjct: 98 QLARAAGLDGLALGVDISEPMLARA-----VAAEAGRQVGFVRADAQQLPFRDEVFDAAT 152
Query: 147 ARALADL 153
+ A+ L
Sbjct: 153 SLAVFQL 159
>gi|1167945|gb|AAA85897.1| peroxisome membrane protein Pmp30 [Candida boidinii]
Length = 256
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG-GFPGIITSIQ 92
L LK ++KINL D + +++ DSL + S IDL G GF GIITSI
Sbjct: 195 DLILKNNEKINL----NKRDLF-KNILDSLIALK----GSQLIDLNDGVLGFAGIITSII 245
>gi|332672134|ref|YP_004455142.1| type 11 methyltransferase [Cellulomonas fimi ATCC 484]
gi|332341172|gb|AEE47755.1| Methyltransferase type 11 [Cellulomonas fimi ATCC 484]
Length = 248
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGII-TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L V +L +DLGSGGG ++ + V++ + R +K
Sbjct: 67 LAVAELR-EGERVLDLGSGGGIDVLLSAKRVGPTGFAHGVDMTDEM---LDLARANAEKA 122
Query: 122 AARGKVFA-CRIQEAPQMITTCDVISA 147
A F I++ P + DV+ +
Sbjct: 123 GATNVAFHKGTIEDLPLDDGSVDVVIS 149
>gi|327281163|ref|XP_003225319.1| PREDICTED: protein arginine N-methyltransferase 1-like [Anolis
carolinensis]
Length = 352
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 65 RHLFKDKVVLDVGSGTGILCMFAAKAGAKRVIGIECSSISDYAVKIVKANKLDHVV---- 120
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 121 ---SIIKGKVEEVELPVEKVDIIIS 142
>gi|311281054|ref|YP_003943285.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1]
gi|308750249|gb|ADO50001.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1]
Length = 342
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 45 LVSSSTVEDFWIRHVED--S-LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
L T+ + R D S L + L P+ +D+G G G + + +
Sbjct: 167 LT-IKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLAAVLASHSPKVR--- 222
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L + R + G VFA + ++ D+I +
Sbjct: 223 LTLCDVSAPAVEASRATLAANGFEGDVFASNV--FSEVTGRFDMIIS 267
>gi|306825048|ref|ZP_07458390.1| methyltransferase domain protein [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432484|gb|EFM35458.1| methyltransferase domain protein [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 196
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L+ G +++ N+ R ++ +F
Sbjct: 55 VNKGETVLDVGCGYG----PLGLSLTKAYGVQATMVDINNRALDLARQNAERNKVEATIF 110
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 111 QSNI--YEQVEGKFDHVISNPPIRA 133
>gi|317055516|ref|YP_004103983.1| type 11 methyltransferase [Ruminococcus albus 7]
gi|315447785|gb|ADU21349.1| Methyltransferase type 11 [Ruminococcus albus 7]
Length = 261
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK-ASFLRYVVQKT----AA 123
P I +D+G G G + + + +G +V I+ K+ ASF +++ ++
Sbjct: 91 LPEGGIGLDVGCGSG--ALTIACAKRNPQGRMVG-IDRWGKEYASFSKHLCEENSDAEGV 147
Query: 124 RGKVFA-CRIQEAPQMITTCDVISA 147
+ F + D +++
Sbjct: 148 QNTEFHQGDACKLDYPDEYFDAVTS 172
>gi|239502950|ref|ZP_04662260.1| hypothetical protein AbauAB_11629 [Acinetobacter baumannii AB900]
Length = 183
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +D+ +G G G S + +IE +A FL+ +Q A+ +
Sbjct: 45 QNAHVLDICTGSGALGFEAL----SRGAASIYMIEPDKTQARFLKDNIQLLKAQNCHLIN 100
Query: 130 CRIQEA-PQMITTCDVI 145
Q+A P++ DV+
Sbjct: 101 ATAQQALPRLKEQFDVV 117
>gi|191639206|ref|YP_001988372.1| 16S RNA methylase [Lactobacillus casei BL23]
gi|190713508|emb|CAQ67514.1| 16S RNA methylase [Lactobacillus casei BL23]
gi|327383284|gb|AEA54760.1| Hypothetical conserved protein [Lactobacillus casei LC2W]
gi|327386467|gb|AEA57941.1| Hypothetical conserved protein [Lactobacillus casei BD-II]
Length = 198
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 14/113 (12%)
Query: 47 SSSTVEDFWIRHVED--S----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
++ + +H D S + +D+G+G G G+ + +
Sbjct: 28 RFTSDNGVFSKHTVDFGSRVLIATILAEELPAGPILDVGTGYGPIGLALAKHFPDRQ--- 84
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
V + + + + + A Q+ VI RA
Sbjct: 85 VTMSDVNERALALAQRNATDNAISNVTIVESSM-YDQIDGQFGVIVTNPPIRA 136
>gi|124484993|ref|YP_001029609.1| DNA topoisomerase VI subunit A-like protein [Methanocorpusculum
labreanum Z]
gi|124362534|gb|ABN06342.1| Methyltransferase type 11 [Methanocorpusculum labreanum Z]
Length = 257
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 16/90 (17%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G G G G+I + ++EG ++ +++ KKA+ +
Sbjct: 54 VLDVGCGTGAMGLIFAEMGHTVEGIDLSEGMMDVGRKKAA-------DMHLAMNFSSGDA 106
Query: 133 QEAPQMITTCDVISARALADLDTLLEYSFP 162
+ P DV+ R L ++ P
Sbjct: 107 EHPPFDDGKFDVVVNR-------HLLWTLP 129
>gi|187476812|ref|YP_784836.1| protein methyltransferase [Bordetella avium 197N]
gi|115421398|emb|CAJ47903.1| protein methyltransferase [Bordetella avium 197N]
Length = 269
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P + +DLG+G G + ++ E V+ + + + R +
Sbjct: 96 LAFLKTRPQ-ARVLDLGTGSGAIAVSIALACPQAE---VSATDLSAEALAVARGNADRLG 151
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
R + A D+I +
Sbjct: 152 VRLHLAQGSWFAALDADARFDLIVS 176
>gi|255745143|ref|ZP_05419092.1| hypothetical adenine-specific methylase yfcB [Vibrio cholera CIRS
101]
gi|262153467|ref|ZP_06028597.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae INDRE
91/1]
gi|262167477|ref|ZP_06035183.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae RC27]
gi|262191367|ref|ZP_06049557.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae CT
5369-93]
gi|255736973|gb|EET92369.1| hypothetical adenine-specific methylase yfcB [Vibrio cholera CIRS
101]
gi|262024049|gb|EEY42744.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae RC27]
gi|262030704|gb|EEY49338.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae INDRE
91/1]
gi|262032742|gb|EEY51290.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae CT
5369-93]
gi|327484646|gb|AEA79053.1| Ribosomal protein L3 methyltransferase [Vibrio cholerae LMA3894-4]
Length = 310
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ + +Q +
Sbjct: 128 WLTEEPTRIMDLCTGSGCIAIACANAFPEAE---VDAIDISVDALNVAEQNIQDHGLEQQ 184
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 185 VFPIRSDLFRDLPQ--EQYDLIV 205
>gi|15893783|ref|NP_347132.1| alanine racemase [Clostridium acetobutylicum ATCC 824]
gi|20137418|sp|Q97LR2|ALR1_CLOAB RecName: Full=Alanine racemase 1
gi|15023352|gb|AAK78472.1|AE007563_12 Alanine racemase [Clostridium acetobutylicum ATCC 824]
gi|325507906|gb|ADZ19542.1| alanine racemase [Clostridium acetobutylicum EA 2018]
Length = 386
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 11/44 (25%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
L+K E+FY K + KIN IRH+ +S + +L
Sbjct: 181 QLKKFEWFYNELRKKNIKIN-----------IRHIGNSAAIMEL 213
>gi|330818723|ref|YP_004362428.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
gladioli BSR3]
gi|327371116|gb|AEA62472.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
gladioli BSR3]
Length = 366
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 27/80 (33%), Gaps = 6/80 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+DLG G G + + + + +V L S ++A F+ + ++
Sbjct: 134 DGQRILDLGCGWGSLSLWLARRYPRAQ--IVGLSNSHGQRA-FIEQRAAELGLANLRIVT 190
Query: 130 CRI--QEAPQMITTCDVISA 147
+ E D + +
Sbjct: 191 GNVVDHEFDAGTERFDRVLS 210
>gi|313496731|gb|ADR58097.1| Biotin biosynthesis protein BioC [Pseudomonas putida BIRD-1]
Length = 272
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 15/101 (14%)
Query: 63 LRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L + + P PS W+DLGSG G + + + + G V++ E L +
Sbjct: 42 LSLLEQLPAGLQPSHWLDLGSGTGHFSRMLAERFAQASGVAVDIAEGM------LLHARH 95
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ P + D++ + L ++
Sbjct: 96 VKGGAQYHVVGDAERLPLRDGSIDLV----FSSLAV--QWC 130
>gi|307106298|gb|EFN54544.1| hypothetical protein CHLNCDRAFT_58183 [Chlorella variabilis]
Length = 292
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 21/125 (16%)
Query: 59 VEDS-LRVFQLHPYPS------IWIDLGSGGGFPGIITSIQLSSIE----GGLVNLIESK 107
V DS + + + + +DL +G G PGI+ + + + G + L+E
Sbjct: 69 VWDSSIVLAKYLEKNAARYAAARCLDLSAGCGLPGIVLAKLGAKVTATDLGPNLVLLEKN 128
Query: 108 NKKASFL--RYVVQKTAARGKVFACRIQEAPQMITTCDVI-------SARALADL-DTLL 157
K L R ++T + + + V+ + A+ L +L+
Sbjct: 129 AKANGGLVCRQAGRQTLSLEVREHTWGADVAALAPPFAVVCACDVMYISEAVGPLVASLV 188
Query: 158 EYSFP 162
S P
Sbjct: 189 ALSGP 193
>gi|299143475|ref|ZP_07036555.1| methyltransferase, UbiE/COQ5 family [Peptoniphilus sp. oral taxon
386 str. F0131]
gi|298517960|gb|EFI41699.1| methyltransferase, UbiE/COQ5 family [Peptoniphilus sp. oral taxon
386 str. F0131]
Length = 201
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G GGG I + + V+ E+ K +S L ++ R KVF
Sbjct: 42 IEKTDNILDIGCGGG-KNIENFLARTDANVYGVDYSEASVKASSQLNKKAVESG-RTKVF 99
Query: 129 ACRIQEAPQMITTCDVISA 147
+++ P + ++ SA
Sbjct: 100 HASVEKLPFDDESFEIASA 118
>gi|296332673|ref|ZP_06875133.1| putative methyltransferase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305673017|ref|YP_003864689.1| putative methyltransferase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296149953|gb|EFG90842.1| putative methyltransferase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305411261|gb|ADM36380.1| putative methyltransferase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 253
Score = 35.1 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+D+G+G G + S ++ I++ + Q+ A +
Sbjct: 38 DQRVLDIGAGAGHTALAFS---PYVQEC--IGIDATKEMVEVASTFAQEKGAGNVRFQQG 92
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D+I+ R
Sbjct: 93 TAESLPFPDDSFDLITCR 110
>gi|330874797|gb|EGH08946.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 269
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLG G G+ + + +G +++ E LR+ Q
Sbjct: 45 LSRLPAGLTPSRWLDLGCGTGYFSRALARTYNQSQGIALDIAEGM------LRHA-QPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P +C++I + L ++ +
Sbjct: 98 GAQHFVAGDAERLPLQGESCELI----FSSLAV--QWCADF 132
>gi|314935934|ref|ZP_07843284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus hominis subsp. hominis C80]
gi|313655940|gb|EFS19682.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus hominis subsp. hominis C80]
Length = 278
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ FY L+ + L+ E+ + H + S D+G+G G I+
Sbjct: 75 FQSFYGYQLQVNSHC-LIPRPETEEVML-HFL------EHCKDGSTIADIGTGSGAIAIV 126
Query: 89 TSIQLSSIEGGLVNLIE 105
++ +LIE
Sbjct: 127 LKKLNPTLNVIATDLIE 143
>gi|282163132|ref|YP_003355517.1| putative methyltransferase [Methanocella paludicola SANAE]
gi|282155446|dbj|BAI60534.1| putative methyltransferase [Methanocella paludicola SANAE]
Length = 295
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 5/93 (5%)
Query: 59 VEDSLRVFQLH-PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFL 114
+ D L + L +D+G G I + + + V+ S +KK
Sbjct: 113 IYD-LVLANLAWNGQGKLLDIGCGSAALTIKLAKKYPNARLTGVDFWGHNWSYSKKICEK 171
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + R + P T D + +
Sbjct: 172 NAAAEGVSDRVTFQKASAMKLPFEDETFDAVVS 204
>gi|228474914|ref|ZP_04059643.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus hominis SK119]
gi|228271146|gb|EEK12526.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Staphylococcus hominis SK119]
Length = 278
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 8/77 (10%)
Query: 29 LEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGII 88
+ FY L+ + L+ E+ + H + S D+G+G G I+
Sbjct: 75 FQSFYGYQLQVNSHC-LIPRPETEEVML-HFL------EHCKDGSTIADIGTGSGAIAIV 126
Query: 89 TSIQLSSIEGGLVNLIE 105
++ +LIE
Sbjct: 127 LKKLNPTLNVIATDLIE 143
>gi|197335027|ref|YP_002156936.1| ribosomal RNA small subunit methyltransferase C [Vibrio fischeri
MJ11]
gi|226713151|sp|B5FAM0|RSMC_VIBFM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|197316517|gb|ACH65964.1| ribosomal RNA small subunit methyltransferase C [Vibrio fischeri
MJ11]
Length = 339
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I +++++ + ++
Sbjct: 191 LLLQTLPALRGHVLDFGCGAGVIGSVMKTINPKIH---LDMVDISALAIASSIETLKANN 247
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G VFA + I +
Sbjct: 248 LEGCVFASDV--YSDTKENYQFIVS 270
>gi|149174180|ref|ZP_01852808.1| hypothetical protein PM8797T_13363 [Planctomyces maris DSM 8797]
gi|148847160|gb|EDL61495.1| hypothetical protein PM8797T_13363 [Planctomyces maris DSM 8797]
Length = 361
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G G G I + ++ E +A + K F +
Sbjct: 181 VLDIGCGSGLALIEMAAAFPQSRFTGFDISEESIGRA---QASAVKRGVTNVTFQVQDVS 237
Query: 135 APQMITTCDVISA 147
M D+I+A
Sbjct: 238 EMNMTDAFDLITA 250
>gi|123442666|ref|YP_001006643.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122089627|emb|CAL12477.1| putative protoporphyrinogen oxidase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 284
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P +DLG+G G + + + V ++ K + R+ +K A
Sbjct: 102 ALAHLPVTPCRILDLGTGTGAIALALASERPDC---AVMGVDIKADAVALARHNAKKLAI 158
Query: 124 RGKVF 128
F
Sbjct: 159 NNVDF 163
>gi|329667224|gb|AEB93172.1| putative methyltransferase [Lactobacillus johnsonii DPC 6026]
Length = 294
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G I +I S + V + ++ + + +
Sbjct: 148 LAMERALVKPMSVLDVGTGSG----ILAIAASKLGASHVLGTDISDEAVTAAKENIALNN 203
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D+I A LA D LLE
Sbjct: 204 IDNIDVR-KANLLKDIDEKYDLIVANILA--DILLEL 237
>gi|308463497|ref|XP_003094022.1| CRE-COQ-3 protein [Caenorhabditis remanei]
gi|308248685|gb|EFO92637.1| CRE-COQ-3 protein [Caenorhabditis remanei]
Length = 268
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 15/87 (17%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR--GKVF 128
P+ +D+GSGGG + + G V I++ + R ++ A G
Sbjct: 75 GPARVVDVGSGGGLLSVPLA-----RSGFDVTGIDATKEAVEAARLSLKVKALERAGIAD 129
Query: 129 ACRIQ--------EAPQMITTCDVISA 147
R + + P+ D + A
Sbjct: 130 RLRFEHTSVEAFCQKPENKAAFDGVIA 156
>gi|302379428|ref|ZP_07267915.1| methyltransferase domain protein [Finegoldia magna ACS-171-V-Col3]
gi|302312773|gb|EFK94767.1| methyltransferase domain protein [Finegoldia magna ACS-171-V-Col3]
Length = 277
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL-IESKNKKASFLRYVVQKTAARGKV 127
P + +D+G G G + + + + +V I S + K F + + + A +
Sbjct: 104 IPDGGVGLDVGCGSG--ALTIACAKRNPKATMVGCDIWSGSYKTEFSKELCENNAKLEGI 161
Query: 128 FACRIQE-----APQMITTCDVISA 147
R +E P + DV+++
Sbjct: 162 ENVRFKEGNAVNLPFEDESFDVVTS 186
>gi|270292698|ref|ZP_06198909.1| N5 glutamine methyltransferase, release factor-specific protein
[Streptococcus sp. M143]
gi|270278677|gb|EFA24523.1| N5 glutamine methyltransferase, release factor-specific protein
[Streptococcus sp. M143]
Length = 278
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 33/104 (31%), Gaps = 13/104 (12%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ L + + +D+G+G G + + V++
Sbjct: 89 LIPRPETEELVE------LILAENSDENLKVLDIGTGSGAIALALAKNRPDWSVTAVDIS 142
Query: 105 ESKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISA 147
+ L + + ++F + ++ D+I +
Sbjct: 143 Q------DALDLATENAKVQNFQIFFKKSDCFAEISEKYDIIVS 180
>gi|237741904|ref|ZP_04572385.1| precorrin-8W decarboxylase [Fusobacterium sp. 4_1_13]
gi|229429552|gb|EEO39764.1| precorrin-8W decarboxylase [Fusobacterium sp. 4_1_13]
Length = 189
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P SI ID+G+G G GI + + G V IE + K +R +K
Sbjct: 23 ISIAKLMLKPNSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIRLNAEKF 79
Query: 122 AARG-KVFACRIQEAPQMITTCD 143
++ + +A I + D
Sbjct: 80 KLDNFELIHGKAPDAIPDI-SYD 101
>gi|168334727|ref|ZP_02692859.1| ribosomal protein L11 methyltransferase [Epulopiscium sp. 'N.t.
morphotype B']
Length = 312
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + + +D+G+G G GI+ + +S+ G I+ + K + + A
Sbjct: 168 LEKYLKKSNRVLDVGTGSGILGIVAAKLGASVLGVD---IDPMSVKVAIENVAINGVADD 224
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
V + E + D++ +
Sbjct: 225 MAVVQGDLLEV--VAEKADIVIS 245
>gi|167465651|ref|ZP_02330740.1| possible 16S rRNA methyltransferase [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 171
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 7/79 (8%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +D+G G G G+ + G V LI+ + + +
Sbjct: 55 LPKDARILDVGCGYGPIGLTAAKLCP---AGHVTLIDINERAVELAKLNARNNHISNVTI 111
Query: 129 ACR--IQEAPQMITTCDVI 145
+ DVI
Sbjct: 112 LQSNLFEHVRD--QKFDVI 128
>gi|167461259|ref|ZP_02326348.1| possible 16S rRNA methyltransferase [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322381135|ref|ZP_08055138.1| ribosomal RNA methyltransferase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321154711|gb|EFX46982.1| ribosomal RNA methyltransferase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 199
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 7/79 (8%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +D+G G G G+ + G V LI+ + + +
Sbjct: 55 LPKDARILDVGCGYGPIGLTAAKLCP---AGHVTLIDINERAVELAKLNARNNHISNVTI 111
Query: 129 ACR--IQEAPQMITTCDVI 145
+ DVI
Sbjct: 112 LQSNLFEHVRD--QKFDVI 128
>gi|73947056|ref|XP_864088.1| PREDICTED: similar to heterogeneous nuclear ribonucleoproteins
methyltransferase-like 2 isoform 9 [Canis familiaris]
Length = 319
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 32 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 87
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 88 ---TIIKGKVEEVELPVEKVDIIIS 109
>gi|304322090|ref|YP_003855733.1| putative 3-demethylubiquinone-9 3-methyltransferase protein
[Parvularcula bermudensis HTCC2503]
gi|303300992|gb|ADM10591.1| putative 3-demethylubiquinone-9 3-methyltransferase protein
[Parvularcula bermudensis HTCC2503]
Length = 256
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 8/78 (10%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + V I+ ++ +++
Sbjct: 62 EGLRLLDIGCGGGLVSEPMARLGAE-----VVGIDPADRNIKIAEAHRRESGVNVDYRTV 116
Query: 131 RIQE-APQMITTCDVISA 147
++ + D++ +
Sbjct: 117 TVERLVAEKEPPFDIVLS 134
>gi|329962821|ref|ZP_08300706.1| methyltransferase domain protein [Bacteroides fluxus YIT 12057]
gi|328529378|gb|EGF56291.1| methyltransferase domain protein [Bacteroides fluxus YIT 12057]
Length = 235
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 27/95 (28%), Gaps = 22/95 (23%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +D+G+G G + + + + + + V
Sbjct: 29 LGAWAPIANVKRVLDVGTGTGLIALQLAQRNPHAKITAIEI------------DTVAAEQ 76
Query: 123 ARGKVFAC----RIQ------EAPQMITTCDVISA 147
A+ V RI+ Q D+I +
Sbjct: 77 AKNNVLHSPWADRIEVLCLDFRNYQQDDKFDLIVS 111
>gi|325283595|ref|YP_004256136.1| methyltransferase small [Deinococcus proteolyticus MRP]
gi|324315404|gb|ADY26519.1| methyltransferase small [Deinococcus proteolyticus MRP]
Length = 387
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 7/88 (7%)
Query: 59 VEDSLRVFQLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ D+L + +DLG G G G ++ G V L++ + R
Sbjct: 234 LLDTLEAQPELDWAGKAVLDLGCGTGLIG-----AWAAQRGAAVTLVDGDLQSVRSARLT 288
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVI 145
+ G+ + +A D++
Sbjct: 289 LAANGLSGEAIHSDV-DADLGERRFDMV 315
>gi|303250439|ref|ZP_07336636.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307251480|ref|ZP_07533387.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650427|gb|EFL80586.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306860944|gb|EFM92950.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 329
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + + A G V A
Sbjct: 190 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRRTLAENALDGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSNIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|289620288|emb|CBI53146.1| unnamed protein product [Sordaria macrospora]
Length = 589
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 7/78 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-- 129
+ +D+G G G I S+ + V ++ R + +
Sbjct: 279 GKVVLDIGCGTG----ILSMFCAKAGAKQVIAVDRSE-IIDKARENIYANGLSDVIVTLK 333
Query: 130 CRIQEAPQMITTCDVISA 147
RI+E + D+I +
Sbjct: 334 GRIEEVILPVEKVDIIVS 351
>gi|262279541|ref|ZP_06057326.1| methyl transferase [Acinetobacter calcoaceticus RUH2202]
gi|262259892|gb|EEY78625.1| methyl transferase [Acinetobacter calcoaceticus RUH2202]
Length = 270
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + + ++ + A + Q + F
Sbjct: 104 LPKNANIVDLGTGTGAIALALASEHPDWQVTATDIYAPTLEVA---KENAQTHGLQQVKF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
AC D+I +
Sbjct: 161 ACGAWFDALDKQQFDLIVS 179
>gi|256826091|ref|YP_003150051.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
gi|256689484|gb|ACV07286.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
Length = 223
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 17/101 (16%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G G G + + +G V ++ + + ++ A
Sbjct: 60 PGRVLDIGCGEGADAVWLA-----QQGWEVTALDISPNAVALTQAAAERVGVSVTGVAAG 114
Query: 132 IQEAPQMITTCDVISA----------RALADLDTLLEYSFP 162
+ A D++SA RA+ L P
Sbjct: 115 LLSADLPAAGFDLVSAMYPVLERTPDRAVER--KLTSLVAP 153
>gi|227827056|ref|YP_002828835.1| methyltransferase type 11 [Sulfolobus islandicus M.14.25]
gi|229584224|ref|YP_002842725.1| Methyltransferase type 11 [Sulfolobus islandicus M.16.27]
gi|227458851|gb|ACP37537.1| Methyltransferase type 11 [Sulfolobus islandicus M.14.25]
gi|228019273|gb|ACP54680.1| Methyltransferase type 11 [Sulfolobus islandicus M.16.27]
Length = 189
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 16/120 (13%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + +LVS R + +DLG G GF I
Sbjct: 9 DRYINPLVLDNPLRSLVSP--PNRILSR-------FVKYLKEDYTVVDLGCGPGFFTTIL 59
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITT-CDVISA 147
+ + V ++ + L+ VQK + + + Q+ + D + +
Sbjct: 60 ARIVK-----TVYAVDPDERAIRRLKEKVQKLSLNNVIPYVAPAQKLEFIKDKSIDFVFS 114
>gi|197105554|ref|YP_002130931.1| methyltransferase type 11 [Phenylobacterium zucineum HLK1]
gi|196478974|gb|ACG78502.1| methyltransferase type 11 [Phenylobacterium zucineum HLK1]
Length = 258
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GF SI++ V ++ ++ R+ + A +
Sbjct: 57 GKTVLDIGCNAGF----YSIEMKRRGADRVVGVDFDDRYLEQARFAAEVKGADIEFRKLS 112
Query: 132 IQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
+ + ++ D++ + L P L
Sbjct: 113 VYDVAELGERFDIVLF-----MGVLYHLRHPLLA 141
>gi|118486172|gb|ABK94929.1| unknown [Populus trichocarpa]
Length = 544
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ---KTAARGKV 127
+ + +D+G+G G I S+ + V +E+ A + R ++ R V
Sbjct: 192 FGRVVVDVGAGSG----ILSLFAAQAGAKHVYAVEASEM-AEYARKLIAGNPSLGKRITV 246
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLL 157
+++E ++ D++ + + TLL
Sbjct: 247 IKGKVEEV-ELPEKADILIS---EPMGTLL 272
>gi|52548889|gb|AAU82738.1| phosphatidylethanolamine N-methyltransferase [uncultured archaeon
GZfos19C7]
Length = 203
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 7/75 (9%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-I 132
+D+G G G SI L+ G V I+ KK + + + + F +
Sbjct: 42 RVLDVGCGTG----RLSIYLNEKAGCDVTGIDMLQKKIE--KAKTRCSGSGNVAFVMQSA 95
Query: 133 QEAPQMITTCDVISA 147
+E DV+ +
Sbjct: 96 EEMGFRNDVFDVVVS 110
>gi|305667716|ref|YP_003864003.1| hypothetical protein FB2170_15763 [Maribacter sp. HTCC2170]
gi|88709766|gb|EAR01999.1| hypothetical protein FB2170_15763 [Maribacter sp. HTCC2170]
Length = 351
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 6/83 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V + + D+G G II + + + + +KA ++
Sbjct: 166 VVEKLEKGAKVADIGCGHAASTIIMAKAFPNSTFFGYDFHDKSIQKAM---QRAKEAGVT 222
Query: 125 GKVFACRIQEAPQMITT-CDVIS 146
F R+ A D ++
Sbjct: 223 NATF--RVATAKDFPGKDYDFVT 243
>gi|325281900|ref|YP_004254442.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Odoribacter splanchnicus DSM 20712]
gi|324313709|gb|ADY34262.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Odoribacter splanchnicus DSM 20712]
Length = 290
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V + + +D+GSG G GI + +G V ++ + R
Sbjct: 105 WVGEWLKPGNRLLDVGSGSGCIGISLARL---CQGAHVTGVDISPEAIELARENAILNGV 161
Query: 124 RGKVFACRI-QEAPQMITTCDVISA 147
+ + I T D+I +
Sbjct: 162 KAEFLLRDILHPQTASWDTYDLIVS 186
>gi|307264716|ref|ZP_07546296.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306870028|gb|EFN01792.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 231
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + + A G V A
Sbjct: 92 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRRTLAENALDGTVVASD 148
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 149 V--FSNIEERFDLIVSNPPFHDGIDTAYRAVEDL 180
>gi|255077912|ref|XP_002502536.1| predicted protein [Micromonas sp. RCC299]
gi|226517801|gb|ACO63794.1| predicted protein [Micromonas sp. RCC299]
Length = 402
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 21/76 (27%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D G+G G + S + V + K + A L
Sbjct: 160 PMRVVDFGAGSGNLILPLSKCFPDMRFTAVEM---KRRSAELLERRAAAAGLTNVDVVVD 216
Query: 132 IQEAPQMITTCDVISA 147
+ E DV A
Sbjct: 217 MIEKTSFD--FDVGVA 230
>gi|226315342|ref|YP_002775238.1| hypothetical protein BBR47_57570 [Brevibacillus brevis NBRC 100599]
gi|226098292|dbj|BAH46734.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 159
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM---ITTCDVISARAL 150
G V ++ K ++ + + A R++ M + D I + A+
Sbjct: 3 NGYPVYAVDQSVKAIEAVQRLASQLAPSWSAEHARVEPIESMSFEKESFDFIISNAV 59
>gi|195998001|ref|XP_002108869.1| hypothetical protein TRIADDRAFT_52302 [Trichoplax adhaerens]
gi|190589645|gb|EDV29667.1| hypothetical protein TRIADDRAFT_52302 [Trichoplax adhaerens]
Length = 453
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
I +D+G G G I S+ + V I+ ++ ++ R +V + K
Sbjct: 169 PALFRDKIVLDVGCGTG----ILSMFAAKAGCRHVYAID-QSDIINYARDIVMENQLENK 223
Query: 127 V--FACRIQEAPQMITTCDVISA 147
+ ++++ I DVI +
Sbjct: 224 ITLIKGKVEDVKLPIEKVDVIIS 246
>gi|168241357|ref|ZP_02666289.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|194447419|ref|YP_002045818.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194405723|gb|ACF65942.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|205339433|gb|EDZ26197.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
Length = 277
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|157371913|ref|YP_001479902.1| methyltransferase small [Serratia proteamaculans 568]
gi|262828677|sp|A8GI34|TRMN6_SERP5 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
Full=tRNA m6A37 methyltransferase
gi|157323677|gb|ABV42774.1| methyltransferase small [Serratia proteamaculans 568]
Length = 260
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT- 121
L + +D+GSG G I + + E ++ +E A+ V ++
Sbjct: 50 LGAWAPLAQAQRVLDIGSGSGL--IALMLAQRTAENVQIDAVELDEAAAAQAHDNVLESP 107
Query: 122 -AARGKVFACRIQEAPQ-MITTCDVISA 147
+ R +V A I Q D+I +
Sbjct: 108 WSLRIQVHAQDIHHFAQHHAGQYDLIVS 135
>gi|170723781|ref|YP_001751469.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Pseudomonas
putida W619]
gi|169761784|gb|ACA75100.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Pseudomonas putida W619]
Length = 409
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE+ + F+ Y
Sbjct: 245 ITLARLAPQPGELLWDVGAGCGSIGIEWMRAHPACRTLA---IEADEGRQGFIEYNRDAL 301
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ + +A + D I
Sbjct: 302 GVPGLQLVRGKAPQALAELERPDAI 326
>gi|157960426|ref|YP_001500460.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC
700345]
gi|226712997|sp|A8H038|RSMC_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|157845426|gb|ABV85925.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC
700345]
Length = 341
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G ++ + ++ + ++
Sbjct: 193 LLLANLPKMSGNVLDFGCGAGVITAALLKAQPDLK---LECVDINAMALASCELTLEANG 249
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
KVFA Q D I +
Sbjct: 250 FTAKVFASDG--LAQTSQRYDGIIS 272
>gi|42519266|ref|NP_965196.1| methyltransferase [Lactobacillus johnsonii NCC 533]
gi|81832209|sp|Q74IX0|PRMA_LACJO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|41583554|gb|AAS09162.1| probable methyltransferase [Lactobacillus johnsonii NCC 533]
Length = 315
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G I +I S + V + ++ + + +
Sbjct: 169 LAMERALVKPMSVLDVGTGSG----ILAIAASKLGASHVLGTDISDEAVTAAKENIALNN 224
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D+I A LA D LLE
Sbjct: 225 IDNIDVR-KANLLKDIDEKYDLIVANILA--DILLEL 258
>gi|51893507|ref|YP_076198.1| arsenite S-adenosylmethyltransferase [Symbiobacterium thermophilum
IAM 14863]
gi|51857196|dbj|BAD41354.1| putative methyltransferase [Symbiobacterium thermophilum IAM 14863]
Length = 278
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P +DLGSG GF + + E G V ++ + + R +K
Sbjct: 87 AIASLKP-GETVLDLGSGAGFDCFLAA--RQVGESGRVIGVDMTPEMLARARENARKGGF 143
Query: 124 RGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P + DVI +
Sbjct: 144 ANVEFRLGEIEHLPVADESVDVIIS 168
>gi|88811228|ref|ZP_01126484.1| putative sarcosine-dimethylglycine methyltransferase [Nitrococcus
mobilis Nb-231]
gi|88791767|gb|EAR22878.1| putative sarcosine-dimethylglycine methyltransferase [Nitrococcus
mobilis Nb-231]
Length = 283
Score = 35.1 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 10/101 (9%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
S TVE + +D+G+G G + Q + +NL E
Sbjct: 50 SRRTVERM--------AGCIPKLDGDTRVLDIGAGYGGAARFLA-QRYGCQVVALNLSEK 100
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+N +A + Q +V ++ P DV+ +
Sbjct: 101 ENDRARQMNR-QQGLDELIEVIDGSFEDLPFNDRHFDVVWS 140
>gi|330956963|gb|EGH57223.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 269
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+D+G G G+ + EG +++ E LR+ Q
Sbjct: 45 LARLPAGFTPSRWLDMGCGTGYFSRALAQAFDHSEGIALDIAEGM------LRHA-QPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P +C +I + L ++ +
Sbjct: 98 GAQHFIAGDAEHLPLRDQSCALI----FSSLAV--QWCADF 132
>gi|331701219|ref|YP_004398178.1| protein-(glutamine-N5) methyltransferase [Lactobacillus buchneri
NRRL B-30929]
gi|329128562|gb|AEB73115.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Lactobacillus buchneri NRRL B-30929]
Length = 282
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+G+G G I + ++ K A + TA
Sbjct: 110 LADNSDSKLKVLDIGTGSGAIAIALKHARPHWQVFASDISLPAIKVAR-QNAIANHTAIH 168
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
V + + DVI +
Sbjct: 169 FMVSDV----FAAIDESFDVIVS 187
>gi|319740471|gb|ADV60529.1| arg methyltransferase [Oberthueria formosibia]
Length = 244
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGATKVIAVEXSN-IVDYARKIIEANRLSDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|295107646|emb|CBL05189.1| Predicted Fe-S oxidoreductases [Gordonibacter pamelaeae 7-10-1-b]
Length = 685
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 19/117 (16%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG-IITSIQLSSIEGGL 100
+N ++D + H + +DLG G G I + + S G
Sbjct: 46 VMN-----EIDDEIMAHFYGCGSPIPPALEGATVLDLGCGTGRDVYICSKLVGPS---GR 97
Query: 101 VNLIESKNKKASFLR--YVVQK-----TAARGKVFACRIQEAPQM---ITTCDVISA 147
V ++ ++ +F R Q T + + I++ + + DV+ +
Sbjct: 98 VIGVDMTEQQLAFARRHEAAQMARFGFTRSNVEFHCGFIEDLGALGIEDESVDVVVS 154
>gi|291533346|emb|CBL06459.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Megamonas hypermegale ART12/1]
Length = 245
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 65 VFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P P +D+G+G GF + + +EG ++L S ++A +Q+
Sbjct: 40 ITKYLPQRPCKILDVGTGTGFFANLLAQYHHEVEG--IDLTASMIEQAKQSLTKLQQHDY 97
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ + T DV+ +R +L ++ P
Sbjct: 98 KINFQVMDAENLYFADNTFDVVISR---NLT----WTLP 129
>gi|283779141|ref|YP_003369896.1| methyltransferase type 11 [Pirellula staleyi DSM 6068]
gi|283437594|gb|ADB16036.1| Methyltransferase type 11 [Pirellula staleyi DSM 6068]
Length = 361
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 8/93 (8%)
Query: 58 HVE---DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
H+ D L+ +D+G G G I + + + + E + A+
Sbjct: 163 HILPLVDGLQA--RLEEGIEVLDVGCGRGRAMIALAERFPHSQFTGYDFSEEAIEAAT-- 218
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
R K A + + D+I+A
Sbjct: 219 REAAAKNLANIRFAVRDAAKIDDHR-QYDLITA 250
>gi|226328150|ref|ZP_03803668.1| hypothetical protein PROPEN_02041 [Proteus penneri ATCC 35198]
gi|225203854|gb|EEG86208.1| hypothetical protein PROPEN_02041 [Proteus penneri ATCC 35198]
Length = 252
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT- 121
L + +D+G+G G I + + + ++ IE K A Q++
Sbjct: 40 LGAWAPINNIKRALDIGTGSGL--IALMLAQRANKVECIDGIELDEKAALQATENAQESQ 97
Query: 122 -AARGKVFACRIQE-APQMITTCDVISA 147
+ ++ I A Q D+I +
Sbjct: 98 WHSLIHIYHSDIHHYAEQAQNKYDLIVS 125
>gi|224130454|ref|XP_002320841.1| predicted protein [Populus trichocarpa]
gi|222861614|gb|EEE99156.1| predicted protein [Populus trichocarpa]
Length = 303
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 16/111 (14%)
Query: 43 INLVSSSTVEDFWIRHVE---DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
+N + + RH + R F+ +D+G GGG + G
Sbjct: 89 MNPTRLAFIRSTLCRHFSKDPNCARPFE----GLKIVDVGCGGGILSEPLARM-----GA 139
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVF---ACRIQEAPQMITTCDVISA 147
V +++ K + R + ++ + D + A
Sbjct: 140 TVTGVDAVEKNINVAR-LHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIA 189
>gi|206900806|ref|YP_002250671.1| ribosomal protein L11 methyltransferase [Dictyoglomus thermophilum
H-6-12]
gi|226710073|sp|B5YDR3|PRMA_DICT6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|206739909|gb|ACI18967.1| ribosomal protein L11 methyltransferase [Dictyoglomus thermophilum
H-6-12]
Length = 301
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 6/83 (7%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G+G G I SI + G V I+ K + ++
Sbjct: 159 LQKYLKEGMDVLDVGTGSG----ILSIVAKKLGAGKVKGIDIDKKAVEVAKENAKRNNVE 214
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ + + D++ A
Sbjct: 215 LEFQQANL--TIGIEDKYDIVVA 235
>gi|294656777|ref|XP_459095.2| DEHA2D14190p [Debaryomyces hansenii CBS767]
gi|199431737|emb|CAG87263.2| DEHA2D14190p [Debaryomyces hansenii]
Length = 278
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPG-IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L + +DLGSGGG + + +++++ K A R +K
Sbjct: 62 LSLANL-KEGEVVVDLGSGGGIDVFLAAKKVGPHGKSIGIDMLKEMIKVA---RTNAEKG 117
Query: 122 AARGKVFA-CRIQEAPQMITTCDVISA 147
F RI + P T DV+ +
Sbjct: 118 GYTNVEFIEARITDIPLKEETADVVIS 144
>gi|115372059|ref|ZP_01459371.1| methlytransferase, UbiE/COQ5 family [Stigmatella aurantiaca
DW4/3-1]
gi|310824652|ref|YP_003957010.1| hypothetical protein STAUR_7427 [Stigmatella aurantiaca DW4/3-1]
gi|115371024|gb|EAU69947.1| methlytransferase, UbiE/COQ5 family [Stigmatella aurantiaca
DW4/3-1]
gi|309397724|gb|ADO75183.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 283
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 21/131 (16%)
Query: 39 WSKKINLVSSS--TVEDFWI---RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQL 93
W+ L + +D + +ED L S +D+G G G ++
Sbjct: 15 WN---GLTGRAWVETQDLLDPMFKPLEDLLVEAVFAGSESQVLDVGCGTG--STALAVAR 69
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR----- 148
G I+ + R ++ Q + D+I +R
Sbjct: 70 RLGAKGRCIGIDISEPMITAARARAERENTPASFIRANAQNHAFEPASFDMILSRFGVMF 129
Query: 149 ------ALADL 153
A A+L
Sbjct: 130 FDDFVQAFANL 140
>gi|94971497|ref|YP_593545.1| HemK family modification methylase [Candidatus Koribacter
versatilis Ellin345]
gi|94553547|gb|ABF43471.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus
Koribacter versatilis Ellin345]
Length = 280
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 56 IRHVEDSLRVFQLHPYPSIW--IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
H+ + V +L P W +D+G+G G + + ++ V ++ +
Sbjct: 97 TEHLIE--AVLELAPREVRWEVLDVGTGSGCIAATLAKEFPRMK---VTAVDISPEALQI 151
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + A+ + + A + D+I +
Sbjct: 152 AQANAARLEAQVEFRVSDLLSAIEPGRQFDMIVS 185
>gi|88601522|ref|YP_501700.1| UbiE/COQ5 methyltransferase [Methanospirillum hungatei JF-1]
gi|88186984|gb|ABD39981.1| UbiE/COQ5 methyltransferase [Methanospirillum hungatei JF-1]
Length = 250
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 27/87 (31%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL L P +D+G+G G I + G +V ++ + R +
Sbjct: 35 SLFSEYLGTAPLKILDVGTGPGSISIPLASM-----GHMVTAVDLSDNMLDLARKNAVAS 89
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR 148
+ P T D + R
Sbjct: 90 NVIVDFRKGDAENLPFDDNTFDAVVNR 116
>gi|34581410|ref|ZP_00142890.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia sibirica
246]
gi|28262795|gb|EAA26299.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia sibirica
246]
Length = 289
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + +G V I++ ++ + I+E
Sbjct: 105 ILDVGCGGGLIATPLA-----AQGFNVTAIDALQSNIETATAYAKENGVKITYLQSTIEE 159
Query: 135 APQMITTCDVISA 147
DV+
Sbjct: 160 LESDKL-YDVVIC 171
>gi|315443814|ref|YP_004076693.1| methylase involved in ubiquinone/menaquinone biosynthesis
[Mycobacterium sp. Spyr1]
gi|315262117|gb|ADT98858.1| methylase involved in ubiquinone/menaquinone biosynthesis
[Mycobacterium sp. Spyr1]
Length = 360
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D G G G + + I+ + + R ++ F
Sbjct: 182 VADFGCGSGHAVNVMAKAFP---ASRFTGIDFSEEGLAAGRDEARRLGLTNASFNATDVA 238
Query: 135 APQMITTCDVISA 147
+ DVI+A
Sbjct: 239 TYDAAESFDVITA 251
>gi|262282282|ref|ZP_06060050.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA]
gi|262261573|gb|EEY80271.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA]
Length = 276
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 11/103 (10%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ L + + +D+G+G G + + + +L
Sbjct: 89 LIPRPETEELVE------LILSENPESSVSVLDIGTGSGAIALALANSRPDWQITASDLS 142
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
E S R + +A Q D+I +
Sbjct: 143 E---DALSLARENARSCGLSLTFVQSDCLDAIQ--GNFDIIVS 180
>gi|294871462|ref|XP_002765943.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239866380|gb|EEQ98660.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 404
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S P +D G+G G G++ ++ V L+E ++ R VQ
Sbjct: 188 SAIPNTTESRPPTVVDFGAGSGHLGLLVGYMRPDVK---VVLVERRSGTCGLARDRVQAL 244
Query: 122 A--ARGKVFACRIQEAPQMITTCDV 144
R +V IQE CDV
Sbjct: 245 GRKDRVEVICGCIQE---YDGPCDV 266
>gi|94968200|ref|YP_590248.1| hypothetical protein Acid345_1171 [Candidatus Koribacter versatilis
Ellin345]
gi|94550250|gb|ABF40174.1| conserved hypothetical protein [Candidatus Koribacter versatilis
Ellin345]
Length = 351
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 23/82 (28%), Gaps = 3/82 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V + + D+G G G I+ + + + + +K R +
Sbjct: 165 VKEKLERGAKVADIGCGKGASTILLAKAFPNSN---IFGFDYHDKSIEMAREAARLEGVD 221
Query: 125 GKVFACRIQEAPQMITTCDVIS 146
+V D +S
Sbjct: 222 DRVTFQLASAKEFPGDGYDFVS 243
>gi|77458118|ref|YP_347623.1| UbiE/COQ5 methyltransferase [Pseudomonas fluorescens Pf0-1]
gi|77382121|gb|ABA73634.1| putative methyltransferase [Pseudomonas fluorescens Pf0-1]
Length = 255
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 21/87 (24%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + +DLG G G + + V + + +
Sbjct: 37 LQAELAGQGEARVLDLGCGAGHVSFHVASLVKE-----VVAYDLSQQMLDVVAAAAVDRG 91
Query: 123 ARGK-VFACRIQEAPQMITTCDVISAR 148
+ P D + +R
Sbjct: 92 LSNVSTVNGAAERLPFADGEFDFVFSR 118
>gi|145223355|ref|YP_001134033.1| methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
gi|145215841|gb|ABP45245.1| Methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
Length = 360
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D G G G + + I+ + + R ++ F
Sbjct: 182 VADFGCGSGHAVNVMAKAFP---ASRFTGIDFSEEGLAAGRDEARRLGLTNASFNATDVA 238
Query: 135 APQMITTCDVISA 147
+ DVI+A
Sbjct: 239 TYDAAESFDVITA 251
>gi|323261019|gb|EGA44614.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
Length = 292
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|317495084|ref|ZP_07953455.1| methyltransferase small domain-containing protein [Gemella
moribillum M424]
gi|316914791|gb|EFV36266.1| methyltransferase small domain-containing protein [Gemella
moribillum M424]
Length = 198
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
F + D+G G G I+ + Q G +++ N+ + ++
Sbjct: 52 FSSQKEVANVADIGCGYGVISIVLAKQNP---GYSFTMVDVNNRSLVLTKKNIELNRIEN 108
Query: 126 KVFACRIQEAPQMITTCDVI 145
KV + D++
Sbjct: 109 KVEIIESSSFDNVKGDFDIV 128
>gi|219872063|ref|YP_002476438.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
SH0165]
gi|219692267|gb|ACL33490.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
SH0165]
Length = 313
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + + + + G V A
Sbjct: 190 KGKVLDLGCGAGVIGACLKQQFPKIK---LTMSDIHAMALESSKRTLAENQLEGDVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ +L
Sbjct: 247 V--FSHIGGRFDLIVSNPPFHDGVDTAYRAVEEL 278
>gi|190151361|ref|YP_001969886.1| ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|226712983|sp|B3GZF1|RSMC_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|189916492|gb|ACE62744.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
Length = 329
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + + A G V A
Sbjct: 190 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRRTLAENALDGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSNIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|189499722|ref|YP_001959192.1| Methyltransferase type 11 [Chlorobium phaeobacteroides BS1]
gi|189495163|gb|ACE03711.1| Methyltransferase type 11 [Chlorobium phaeobacteroides BS1]
Length = 267
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 5/86 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPG-IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
F +DLGSG GF + + V++ + +KA R +
Sbjct: 65 TAFANLGNNETVLDLGSGAGFDCFLAAAKVGPQGNVIGVDMTPAMIEKA---RANAKNNG 121
Query: 123 ARGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P + DV+ +
Sbjct: 122 VENVEFRLGEIENLPVADNSVDVVIS 147
>gi|163759880|ref|ZP_02166964.1| 3-demethylubiquinone-9 3-methyltransferase [Hoeflea phototrophica
DFL-43]
gi|162282838|gb|EDQ33125.1| 3-demethylubiquinone-9 3-methyltransferase [Hoeflea phototrophica
DFL-43]
Length = 250
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 19/138 (13%)
Query: 20 NVSRETLEK--LEYFYFLFLKW-SK--------KINLVSSSTVEDFWIRHVE-DSLRVFQ 67
+ +R T+++ ++ F L +W + K N V S + D H D
Sbjct: 3 DAARTTIDQGEVDRFSALAAEWWNPNGKFRPLHKFNPVRLSYIRDHVASHFGRDPKSDKP 62
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L +D+G GGG + G V ++ +++
Sbjct: 63 L--EGLRLLDIGCGGGLLCEPMARM-----GAQVLGADASETNVEVASIHARQSGLPVTY 115
Query: 128 FACRIQEAPQMITTCDVI 145
A +E DV+
Sbjct: 116 EAVTSEELAARGERFDVV 133
>gi|149907579|ref|ZP_01896326.1| peptide release factor-glutamine N5-methyltransferase [Moritella
sp. PE36]
gi|149809249|gb|EDM69178.1| peptide release factor-glutamine N5-methyltransferase [Moritella
sp. PE36]
Length = 279
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + +DLG+G G + + + V IE + A+ R V++
Sbjct: 103 ALACMPTHACQVLDLGTGTGAIALALASESPQ---ATVTAIEYQQGAAALARRNVKRCGF 159
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
V E + DVI +
Sbjct: 160 DVTVLQGSWFEPLKASQRFDVIVS 183
>gi|172063073|ref|YP_001810724.1| methyltransferase type 11 [Burkholderia ambifaria MC40-6]
gi|171995590|gb|ACB66508.1| Methyltransferase type 11 [Burkholderia ambifaria MC40-6]
Length = 282
Score = 35.1 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 26/89 (29%), Gaps = 13/89 (14%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G G G + +I ++ + + + ++ Q
Sbjct: 53 LDVGCGTG--AVTLAIARRLGAHAHCTGVDISARMIAAAQARAEREGLAASFVPADAQTH 110
Query: 136 PQMITTCDVISA-----------RALADL 153
D+I + RA A+L
Sbjct: 111 AFAPAQFDLIVSRFGVMFFDDPVRAFANL 139
>gi|302560459|ref|ZP_07312801.1| UbiE/COQ5 family methyltransferase [Streptomyces griseoflavus
Tu4000]
gi|302478077|gb|EFL41170.1| UbiE/COQ5 family methyltransferase [Streptomyces griseoflavus
Tu4000]
Length = 284
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G +I + + V+L ++A R V +
Sbjct: 48 GDRVLDVGCGTGQTTLIAARRAYDGSVLGVDLSAPMLERAR--RDAVAEGVGNVGFEQGD 105
Query: 132 IQEAPQMITTCDVISAR 148
Q P DV+ +R
Sbjct: 106 AQVHPFPGQEFDVVLSR 122
>gi|228946145|ref|ZP_04108480.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228813558|gb|EEM59844.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 210
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 26/84 (30%), Gaps = 9/84 (10%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF----LRYVVQKTAARG 125
+D+G+G G I ++ + I+ K + + + G
Sbjct: 39 DGKGKILDIGTGSGSLIIKLAMAFPK---SFLTGIDYWGKNWEYSRDQCQQNAEIEGVSG 95
Query: 126 KV--FACRIQEAPQMITTCDVISA 147
++ E P D++ +
Sbjct: 96 RIDFLKASAAELPLQDDEFDIVVS 119
>gi|167855880|ref|ZP_02478630.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
29755]
gi|167852968|gb|EDS24232.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
29755]
Length = 313
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + + + + G V A
Sbjct: 190 KGKVLDLGCGAGVIGACLKQQFPKIK---LTMSDIHAMALESSKRTLAENQLEGDVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ +L
Sbjct: 247 V--FSHIGGRFDLIVSNPPFHDGVDTAYRAVEEL 278
>gi|2498762|sp|Q00317|PX11B_CANBO RecName: Full=Peroxisomal membrane protein PMP30B; AltName:
Full=Peroxin-11B; AltName: Full=Peroxisomal membrane
protein PMP32
gi|457393|gb|AAA66347.1| peroxisomal membrane protein 32 [Candida boidinii]
Length = 256
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG-GFPGIITSIQ 92
L LK ++KINL D + +++ DSL + S IDL G GF GIITSI
Sbjct: 195 DLILKNNEKINL----NKRDLF-KNILDSLIALK----GSQLIDLNDGVLGFAGIITSII 245
>gi|15642117|ref|NP_231749.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586816|ref|ZP_01676598.1| adenine-specific methylase, putative [Vibrio cholerae 2740-80]
gi|121727216|ref|ZP_01680383.1| adenine-specific methylase, putative [Vibrio cholerae V52]
gi|147673603|ref|YP_001217639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio cholerae O395]
gi|153213246|ref|ZP_01948658.1| adenine-specific methylase, putative [Vibrio cholerae 1587]
gi|153803027|ref|ZP_01957613.1| adenine-specific methylase, putative [Vibrio cholerae MZO-3]
gi|153818977|ref|ZP_01971644.1| adenine-specific methylase, putative [Vibrio cholerae NCTC 8457]
gi|153822882|ref|ZP_01975549.1| adenine-specific methylase, putative [Vibrio cholerae B33]
gi|153825591|ref|ZP_01978258.1| adenine-specific methylase, putative [Vibrio cholerae MZO-2]
gi|153828601|ref|ZP_01981268.1| putative adenine-specific methylase [Vibrio cholerae 623-39]
gi|227082243|ref|YP_002810794.1| putative adenine-specific methylase [Vibrio cholerae M66-2]
gi|229507797|ref|ZP_04397302.1| hypothetical protein VCF_003026 [Vibrio cholerae BX 330286]
gi|229511966|ref|ZP_04401445.1| hypothetical protein VCE_003376 [Vibrio cholerae B33]
gi|229513769|ref|ZP_04403231.1| hypothetical protein VCB_001414 [Vibrio cholerae TMA 21]
gi|229519102|ref|ZP_04408545.1| hypothetical protein VCC_003130 [Vibrio cholerae RC9]
gi|229524120|ref|ZP_04413525.1| hypothetical protein VCA_001704 [Vibrio cholerae bv. albensis
VL426]
gi|229528870|ref|ZP_04418260.1| hypothetical protein VCG_001960 [Vibrio cholerae 12129(1)]
gi|229607342|ref|YP_002877990.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio cholerae MJ-1236]
gi|254226355|ref|ZP_04919944.1| adenine-specific methylase, putative [Vibrio cholerae V51]
gi|254291354|ref|ZP_04962147.1| adenine-specific methylase, putative [Vibrio cholerae AM-19226]
gi|254849203|ref|ZP_05238553.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio cholerae MO10]
gi|298497860|ref|ZP_07007667.1| protein-(glutamine-N5) methyltransferase, LSU ribosomal protein
L3-specific [Vibrio cholerae MAK 757]
gi|18203198|sp|Q9KQ83|Y2118_VIBCH RecName: Full=Uncharacterized adenine-specific methylase VC_2118
gi|9656668|gb|AAF95263.1| adenine-specific methylase, putative [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121548983|gb|EAX59022.1| adenine-specific methylase, putative [Vibrio cholerae 2740-80]
gi|121630461|gb|EAX62854.1| adenine-specific methylase, putative [Vibrio cholerae V52]
gi|124116046|gb|EAY34866.1| adenine-specific methylase, putative [Vibrio cholerae 1587]
gi|124121425|gb|EAY40168.1| adenine-specific methylase, putative [Vibrio cholerae MZO-3]
gi|125621105|gb|EAZ49450.1| adenine-specific methylase, putative [Vibrio cholerae V51]
gi|126510472|gb|EAZ73066.1| adenine-specific methylase, putative [Vibrio cholerae NCTC 8457]
gi|126519578|gb|EAZ76801.1| adenine-specific methylase, putative [Vibrio cholerae B33]
gi|146315486|gb|ABQ20025.1| putative adenine-specific methylase [Vibrio cholerae O395]
gi|148875872|gb|EDL74007.1| putative adenine-specific methylase [Vibrio cholerae 623-39]
gi|149740742|gb|EDM54841.1| adenine-specific methylase, putative [Vibrio cholerae MZO-2]
gi|150422684|gb|EDN14638.1| adenine-specific methylase, putative [Vibrio cholerae AM-19226]
gi|227010131|gb|ACP06343.1| putative adenine-specific methylase [Vibrio cholerae M66-2]
gi|227014014|gb|ACP10224.1| putative adenine-specific methylase [Vibrio cholerae O395]
gi|229332644|gb|EEN98130.1| hypothetical protein VCG_001960 [Vibrio cholerae 12129(1)]
gi|229337701|gb|EEO02718.1| hypothetical protein VCA_001704 [Vibrio cholerae bv. albensis
VL426]
gi|229343791|gb|EEO08766.1| hypothetical protein VCC_003130 [Vibrio cholerae RC9]
gi|229348950|gb|EEO13907.1| hypothetical protein VCB_001414 [Vibrio cholerae TMA 21]
gi|229351931|gb|EEO16872.1| hypothetical protein VCE_003376 [Vibrio cholerae B33]
gi|229355302|gb|EEO20223.1| hypothetical protein VCF_003026 [Vibrio cholerae BX 330286]
gi|229369997|gb|ACQ60420.1| hypothetical protein VCD_002253 [Vibrio cholerae MJ-1236]
gi|254844908|gb|EET23322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Vibrio cholerae MO10]
gi|297542193|gb|EFH78243.1| protein-(glutamine-N5) methyltransferase, LSU ribosomal protein
L3-specific [Vibrio cholerae MAK 757]
Length = 314
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ + +Q +
Sbjct: 132 WLTEEPTRIMDLCTGSGCIAIACANAFPEAE---VDAIDISVDALNVAEQNIQDHGLEQQ 188
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 189 VFPIRSDLFRDLPQ--EQYDLIV 209
>gi|332186791|ref|ZP_08388533.1| ubiE/COQ5 methyltransferase family protein [Sphingomonas sp. S17]
gi|332013124|gb|EGI55187.1| ubiE/COQ5 methyltransferase family protein [Sphingomonas sp. S17]
Length = 225
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 33/113 (29%), Gaps = 20/113 (17%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S + I++G G G I ++ V+L E KA V +
Sbjct: 34 SAAIVAAERIGGRIIEVGVGTG---ISLPQYSAANRIVGVDLSEPMLDKAR--ERVKRGN 88
Query: 122 AARGKVFA-CRIQEAPQMITTCDVISA-----------RALADLDTLLEYSFP 162
A + A + + DV+ A RA LD P
Sbjct: 89 LAHVEQIAYGDAEALQFADNSFDVVVAQYVITAVPNPERA---LDEFARICRP 138
>gi|289424558|ref|ZP_06426341.1| methyltransferase domain protein [Propionibacterium acnes SK187]
gi|289427513|ref|ZP_06429226.1| methyltransferase domain protein [Propionibacterium acnes J165]
gi|289155255|gb|EFD03937.1| methyltransferase domain protein [Propionibacterium acnes SK187]
gi|289159443|gb|EFD07634.1| methyltransferase domain protein [Propionibacterium acnes J165]
Length = 265
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 7/85 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V ++ S +D+G G G I + G V +++ S L ++
Sbjct: 52 AAVTEIVEPGSSVLDVGGGTGRFAIPLA-----QRGCRVTVLDRSEDMLSVLESSAEEKD 106
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
V + + D + A
Sbjct: 107 VEIDVVHQ--EWPADLGCQFDSVMA 129
>gi|282855513|ref|ZP_06264832.1| methyltransferase, UbiE/COQ5 family [Pyramidobacter piscolens
W5455]
gi|282586656|gb|EFB91905.1| methyltransferase, UbiE/COQ5 family [Pyramidobacter piscolens
W5455]
Length = 263
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 26/95 (27%), Gaps = 9/95 (9%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN----LIESKNKKASFL 114
D L +D+G G G I + + + V+ + + K+
Sbjct: 80 FYDDLLDHLAWQGQGRLLDIGCGSGALSIRCARRFPGAQVIGVDYWSGVWDYSQKQC--- 136
Query: 115 RYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
+ G++ + D + +
Sbjct: 137 EENARLEGCDGRIDFRHGDAARLEFADESFDAVVS 171
>gi|225868514|ref|YP_002744462.1| methyltransferase [Streptococcus equi subsp. zooepidemicus]
gi|225701790|emb|CAW99202.1| putative methyltransferase [Streptococcus equi subsp.
zooepidemicus]
Length = 282
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 12/144 (8%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ ++L +L + +VS + + YF L L ++ L+ E+ L
Sbjct: 49 SEDQALLERIFLALSQHVSPQYITGRAYFRDLVLAVDSRV-LIPRPETEELVE------L 101
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I + + S +
Sbjct: 102 ILKENDATRKSVLDIGTGSGAIAIALKKARPNWQVTA-----SDISADALSLAYSNALDH 156
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ ++ D+I +
Sbjct: 157 HVEIAFEESDLFSKLSGQFDIIVS 180
>gi|254514209|ref|ZP_05126270.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [gamma proteobacterium NOR5-3]
gi|219676452|gb|EED32817.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [gamma proteobacterium NOR5-3]
Length = 321
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--KTAARGKVFA 129
P+ +DL GGG GI ++ ++ V L + S R + + +R +V
Sbjct: 145 PTRILDLCCGGGCIGIAAAVYQPELQ---VVLADIDADALSLARENIARYELQSRVQVRQ 201
Query: 130 CRIQEAPQMITTCDVISA 147
+ +A DVI
Sbjct: 202 SDLMDALG-DERFDVILC 218
>gi|193215886|ref|YP_001997085.1| type 11 methyltransferase [Chloroherpeton thalassium ATCC 35110]
gi|193089363|gb|ACF14638.1| Methyltransferase type 11 [Chloroherpeton thalassium ATCC 35110]
Length = 279
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ S +D+GSG G + + +NL E +NK+ R +
Sbjct: 59 ASLLPNIDQASHILDIGSGFGGATRFLAKKF-GCRVTDLNLSEIENKRN---REMSNDQG 114
Query: 123 ARG--KVFACRIQEAPQMITTCDVISA 147
+V + P + D + +
Sbjct: 115 LGNLIEVVEGSFESIPFPDNSFDAVWS 141
>gi|223936805|ref|ZP_03628715.1| Methyltransferase type 12 [bacterium Ellin514]
gi|223894656|gb|EEF61107.1| Methyltransferase type 12 [bacterium Ellin514]
Length = 245
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 22/150 (14%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVE-D-------SLR-VFQLHPYPSIW 75
T ++++ KW ++L ST D H D S+ + +
Sbjct: 13 TQDEIQLRVKQLGKWFHNLDLKGVSTAPD----HFLGDYPRIKWQSIADILPRNLSGKTV 68
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D+G GF SI++ V I+ + ++ + + + +
Sbjct: 69 LDIGCNAGF----YSIEMKRRGADRVLGIDHDDCYLDQAKFAAEVCGVDVEFQKLSVYDL 124
Query: 136 PQMITTCDVISARALADLDTLLEYSFPWLY 165
Q+ D++ + L P L
Sbjct: 125 GQLGEKFDLVLF-----MGVLYHLRHPLLA 149
>gi|160936945|ref|ZP_02084309.1| hypothetical protein CLOBOL_01834 [Clostridium bolteae ATCC
BAA-613]
gi|158440135|gb|EDP17882.1| hypothetical protein CLOBOL_01834 [Clostridium bolteae ATCC
BAA-613]
Length = 260
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L F + +DLG+G G I + + EG +E + + A R V
Sbjct: 52 LSGFAVVKKGEKVLDLGTGTGI--IPI-LLTAKTEGSHFTGLEIQEESADMARRSVAYNH 108
Query: 123 ARGKV--FACRIQEAPQMI--TTCDVIS 146
GKV I EA ++ + DV++
Sbjct: 109 LEGKVDIVTGDIVEASRLFALASFDVVT 136
>gi|47568718|ref|ZP_00239414.1| methyltransferase [Bacillus cereus G9241]
gi|47554612|gb|EAL12967.1| methyltransferase [Bacillus cereus G9241]
Length = 233
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFAC 130
+DLGSG G I + IQ +S V+L++S K L+ ++ K
Sbjct: 53 VLDLGSGVGRNSIPIAQKIQNASGTVTCVDLLDSALTK---LQTYSKEYGVIKNIKTEQA 109
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 110 AIENYYIQPNTYDYIV--AVSSLE 131
>gi|328950556|ref|YP_004367891.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Marinithermus hydrothermalis DSM 14884]
gi|328450880|gb|AEB11781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Marinithermus hydrothermalis DSM 14884]
Length = 276
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P P +D+G+G G + V ++ + R +
Sbjct: 105 LELLRDQPAP-RVLDVGTGSGAIALALKHARPD---AAVWATDTNPAAVALARQNAARLG 160
Query: 123 ARGKVF 128
+V
Sbjct: 161 LTIEVV 166
>gi|321441973|gb|ADW85401.1| arg methyltransferase [Atteva punctella]
Length = 244
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V +E N + R +++
Sbjct: 18 RHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAVECSN-IVDYARKIIEANRLDDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELPVEKVDIIIS 95
>gi|300855701|ref|YP_003780685.1| putative methyltransferase [Clostridium ljungdahlii DSM 13528]
gi|300435816|gb|ADK15583.1| predicted methyltransferase [Clostridium ljungdahlii DSM 13528]
Length = 207
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLV-NLIESKNKKASFLRYVVQKTAARGKV 127
I +D+G GGG + + V ++ N F + ++ + R +V
Sbjct: 43 IKQEDIILDIGCGGGRTINRLANIAKKGKVIGVDYSMDCVNWSKEFNKELIDEK--RVEV 100
Query: 128 FACRIQEAPQMITTCDVISA 147
+ +++ P +V++A
Sbjct: 101 YNANVEKLPFEDDKFNVVTA 120
>gi|300312991|ref|YP_003777083.1| 3-demethylubiquinone-9 3-methyl transferase [Herbaspirillum
seropedicae SmR1]
gi|300075776|gb|ADJ65175.1| 3-demethylubiquinone-9 3-methyl transferase protein [Herbaspirillum
seropedicae SmR1]
Length = 241
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
ID+G GGG + S+ L + ++L + K A ++ + +
Sbjct: 57 GKKVIDIGCGGGI--LAESMALKGGDVTGIDLSDKALKVADLHSM---ESGVQVRYEKIA 111
Query: 132 IQE-APQMITTCDVISA 147
++ A + DV++
Sbjct: 112 AEDMAAREAGQYDVVTC 128
>gi|288555681|ref|YP_003427616.1| ribosomal protein L11 methyltransferase [Bacillus pseudofirmus OF4]
gi|288546841|gb|ADC50724.1| ribosomal protein L11 methyltransferase [Bacillus pseudofirmus OF4]
Length = 310
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 11/106 (10%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
++ + + ID+G+G G + SI + + V ++ V+
Sbjct: 164 CIQALESVMQGGEEVIDVGTGSG----VLSIAAAKLGAKRVIGLDLDQVAVDSAALNVEL 219
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
V + Q+ + D++ A + L E ++
Sbjct: 220 NQVHDTVTVRQGNLLEQIDGSYDLVVA------NILAEVIVQFVQD 259
>gi|242398179|ref|YP_002993603.1| Cyclopropane-fatty-acyl-phospholipid synthase superfamily
[Thermococcus sibiricus MM 739]
gi|242264572|gb|ACS89254.1| Cyclopropane-fatty-acyl-phospholipid synthase superfamily
[Thermococcus sibiricus MM 739]
Length = 245
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 9/100 (9%)
Query: 51 VEDFWIRH---VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+++ + +H D L P + +D+G G G + + G V ++
Sbjct: 18 LQEAFTKHTKKEIDFLLEEFKLPEGAKILDVGCGVGRHSLELA-----KRGYRVTGVDIS 72
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
K QK + + + D
Sbjct: 73 QKMLEKAEERAQKEGVEVEFIKADATKFARN-EKFDAAVC 111
>gi|255540057|ref|XP_002511093.1| Magnesium-protoporphyrin O-methyltransferase, putative [Ricinus
communis]
gi|223550208|gb|EEF51695.1| Magnesium-protoporphyrin O-methyltransferase, putative [Ricinus
communis]
Length = 315
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 10/88 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
D G G G I + EG +V + S ++ +
Sbjct: 148 GVTVCDAGCGTGSLSIPLA-----KEGAIVLASDISAAMVSEAEKNAKEQLGENVLPKFE 202
Query: 132 IQEAPQMITTCDVISARALADLDTLLEY 159
+++ + D + LD L+ Y
Sbjct: 203 VKDLESLDGKYDTVVC-----LDVLIHY 225
>gi|195978152|ref|YP_002123396.1| methylase of polypeptide chain release factors [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195974857|gb|ACG62383.1| methylase of polypeptide chain release factors [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 282
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 45/144 (31%), Gaps = 12/144 (8%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ ++L +L + +VS + + YF L L ++ L+ E+ L
Sbjct: 49 SEDQALLERIFLALSQHVSPQYITGRAYFRDLVLAVDSRV-LIPRPETEELVE------L 101
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I + + S +
Sbjct: 102 ILKENDATRKSVLDIGTGSGAIAIALKKARPNWQVTA-----SDISADALSLAYSNALDH 156
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ ++ D+I +
Sbjct: 157 HVEIAFEESDLFSKLSGQFDIIVS 180
>gi|157144728|ref|YP_001452047.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Citrobacter koseri ATCC BAA-895]
gi|157081933|gb|ABV11611.1| hypothetical protein CKO_00455 [Citrobacter koseri ATCC BAA-895]
Length = 310
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P +D+ +G G I + E V+ ++ + + + +++ V
Sbjct: 129 ISEQPHHILDMCTGSGCIAIACAYAFPEAE---VDAVDISSDALAVTEHNIEEHGLLNHV 185
Query: 128 FACRIQEAPQMIT-TCDVIS 146
R + D+I
Sbjct: 186 TPIRSDLFRDLPKVQYDLIV 205
>gi|330895651|gb|EGH27957.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 400
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + + E + + F R +
Sbjct: 239 ITLARLAPLPGELLWDVGAGCGSIGIEWMRAHPTCRAMAIEADEGRQQLIEFNRDALGVP 298
Query: 122 AARGKVFACRIQEAPQMITTCDVI 145
+V +A + D I
Sbjct: 299 GL--QVVRGSAPQALSGLERPDAI 320
>gi|253989695|ref|YP_003041051.1| hypothetical protein PAU_02215 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781145|emb|CAQ84307.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 317
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 8/94 (8%)
Query: 59 VEDSLRVFQLHPY-----PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
+ D +F L +D G G G I + + V++ E+ A
Sbjct: 17 IYDLAGIFGLIFNDDLLNGKKVVDFGCGTGHRLIGLASFYPETQFVGVDMTENSLDVAKK 76
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
L + K+ I+ + D+ +
Sbjct: 77 L--IAHHNVQNVKLVNSTIEGFSE-KGQYDIAIS 107
>gi|238920845|ref|YP_002934360.1| hypothetical protein NT01EI_2971 [Edwardsiella ictaluri 93-146]
gi|238870414|gb|ACR70125.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 273
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 29/103 (28%), Gaps = 16/103 (15%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L +D+G G G + T+ + + LR
Sbjct: 51 LTAAMDLSRAQTLLDVGCGPGSVCLATA---PRLRQAYGLDYSKGMLAVAALR--AGHLN 105
Query: 123 ARGKVFACRI-QEAPQMITTCDVIS-AR---------ALADLD 154
R +E I CDV+ +R ALA L+
Sbjct: 106 LDNVTLIQRAWEEPWDDIPRCDVVVASRSTLVDDLRPALAKLN 148
>gi|229522071|ref|ZP_04411488.1| hypothetical protein VIF_002616 [Vibrio cholerae TM 11079-80]
gi|229340996|gb|EEO06001.1| hypothetical protein VIF_002616 [Vibrio cholerae TM 11079-80]
Length = 314
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G I + E V+ I+ + +Q +
Sbjct: 132 WLTEEPTRIMDLCTGSGCIAIACANAFPEAE---VDAIDISVDALNVAEQNIQDHGLEQQ 188
Query: 127 VFACR---IQEAPQMITTCDVIS 146
VF R ++ PQ D+I
Sbjct: 189 VFPIRSDLFRDLPQ--EQYDLIV 209
>gi|225572175|ref|ZP_03781039.1| hypothetical protein RUMHYD_00469 [Blautia hydrogenotrophica DSM
10507]
gi|225040347|gb|EEG50593.1| hypothetical protein RUMHYD_00469 [Blautia hydrogenotrophica DSM
10507]
Length = 276
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G GF II EG V I+ + + V++ + ++ Q
Sbjct: 76 KILDVGTGPGFFPIILG-----EEGHQVIGIDITENMIACAKENVKQWGQQAQLLTMDCQ 130
Query: 134 EAPQMITTCDVISAR 148
+ D I R
Sbjct: 131 NLKFEDESFDAILCR 145
>gi|219850692|ref|YP_002465124.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
gi|219544951|gb|ACL15401.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
Length = 293
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 10/88 (11%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ LHP +D+G+G G + S V +E L+ +Q
Sbjct: 61 TIRDLHPNRKERVLDIGAGPGTLALPLSPL-----VRSVTTVEPAGGMVEVLKEHIQSEG 115
Query: 123 ARGKV-FACRIQEA---PQMITTCDVIS 146
R ++ + D++
Sbjct: 116 IDNITCIQKRWEDVNSTEDLAPPYDLVI 143
>gi|78499397|gb|ABB45733.1| HMT hnRNP methyltransferase-like 2 [Ovis aries]
Length = 180
Score = 35.1 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 66 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 121
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 122 ---TIIKGKVEEVELPVEKVDIIIS 143
>gi|332856788|ref|XP_512828.3| PREDICTED: protein arginine N-methyltransferase 1-like [Pan
troglodytes]
Length = 248
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSS----IEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + +D+GSG G + + + IE ++ K KA+ L +VV
Sbjct: 84 RHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVV---- 139
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +++E + D+I +
Sbjct: 140 ---TIIKGKVEEVELPVEKVDIIIS 161
>gi|319440973|ref|ZP_07990129.1| methyltransferase type 11 [Corynebacterium variabile DSM 44702]
Length = 291
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Query: 61 DSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGG--LVNLIESKNKKASFLRYV 117
DSL S +D+G G G + + ++ + G V +E+
Sbjct: 35 DSLAFALPYLTAGSRVLDVGCGPGSITLDLAAMIAGLGGAASQVTGVENTPVPLEAACAA 94
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + P + DV+ A
Sbjct: 95 AEARGIGAQFLPGDVYRLPFEDASFDVVVA 124
>gi|157803509|ref|YP_001492058.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia canadensis
str. McKiel]
gi|166201217|sp|A8EY40|UBIG_RICCK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|157784772|gb|ABV73273.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia canadensis
str. McKiel]
Length = 236
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + +G V I++ ++ + I+E
Sbjct: 56 ILDVGCGGGLIATPLA-----AQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEE 110
Query: 135 APQMITTCDVISA 147
DV+
Sbjct: 111 LKSNKL-YDVVIC 122
>gi|220932865|ref|YP_002509773.1| methyltransferase small [Halothermothrix orenii H 168]
gi|219994175|gb|ACL70778.1| methyltransferase small [Halothermothrix orenii H 168]
Length = 246
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 17/97 (17%)
Query: 61 DSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL--------IESKNKK 110
DS+ + +DLGSG G I + G ++ L + K+ +
Sbjct: 26 DSVLLANFVKVKDGESVVDLGSGSGV--IPLLLAFKQKPGRVIGLEILPELVQLSKKSAR 83
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ L +++ K I+ + + D++
Sbjct: 84 MNGLEEIIEFIEGDIKEIDDYIE-----LESVDLVVC 115
>gi|119714220|ref|YP_919362.1| methyltransferase type 11 [Nocardioides sp. JS614]
gi|119526129|gb|ABL79499.1| Methyltransferase type 11 [Nocardioides sp. JS614]
Length = 285
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 39/150 (26%)
Query: 17 NTYNVSRETLEKLEYFY--FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSI 74
T+ +SRE + E + LF +W+ + + D RV
Sbjct: 24 ETFQLSREQAQAYEDLFVPALFGQWAPQ----------------LVDCARVRD----GQS 63
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+ G G + ++ + S + V Q+ + +++
Sbjct: 64 VLDVACGTGV------VARAARDLVGPGGRVVGVDLNSAMLEVAQEARPDLEWVHGDVED 117
Query: 135 APQMITTCDVISA-----------RALADL 153
P DV RA+A++
Sbjct: 118 LPFEDAEFDVALCQSALFFFADPGRAVAEM 147
>gi|331015044|gb|EGH95100.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 269
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLG G G+ + S EG +++ E LR+ Q
Sbjct: 45 LSRLPAGFTPSPWLDLGCGTGYFSRALARTFSQSEGIALDIAEGM------LRHA-QPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P C++I + L ++ +
Sbjct: 98 GAQHFVAGDAERLPLRDERCELI----FSSLAV--QWCADF 132
>gi|256371604|ref|YP_003109428.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Acidimicrobium ferrooxidans DSM 10331]
gi|256008188|gb|ACU53755.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Acidimicrobium ferrooxidans DSM 10331]
Length = 390
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +++G+G G+ G+ I + +E + ++A+ R + AR +V
Sbjct: 246 LPPGARVLEVGAGTGYVGLTLWRLRPDI---TIVQLEPRAERAARAREHARALGARVEVL 302
Query: 129 ACRIQEAPQMITTCDVI 145
R++E D
Sbjct: 303 EARVEE-HAPEGDYDAA 318
>gi|254556846|ref|YP_003063263.1| ribosomal protein L11 methyltransferase (putative) [Lactobacillus
plantarum JDM1]
gi|308180787|ref|YP_003924915.1| ribosomal protein L11 methyltransferase [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|254045773|gb|ACT62566.1| ribosomal protein L11 methyltransferase (putative) [Lactobacillus
plantarum JDM1]
gi|308046278|gb|ADN98821.1| ribosomal protein L11 methyltransferase [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 316
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 21/111 (18%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L+ + + ID+G+G G + SI ++ G V + + + +
Sbjct: 165 CLQALETVINGGEHLIDVGTGSG----VLSIAAKAMGVGAVEAYDLDD-----VAVASAQ 215
Query: 121 TAARGKVFACRIQEAPQ-----MITTCDVISARALADLDTLLEYSFPWLYQ 166
T A + A + T D+I A + L E P + Q
Sbjct: 216 TNLDLNPVAKDVHVAANDLLAGIDTQADIIVA------NILAEIIIPLVPQ 260
>gi|300768159|ref|ZP_07078064.1| ribosomal protein L11 methyltransferase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|300494223|gb|EFK29386.1| ribosomal protein L11 methyltransferase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
Length = 323
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 21/111 (18%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L+ + + ID+G+G G + SI ++ G V + + + +
Sbjct: 172 CLQALETVINGGEHLIDVGTGSG----VLSIAAKAMGVGAVEAYDLDD-----VAVASAQ 222
Query: 121 TAARGKVFACRIQEAPQ-----MITTCDVISARALADLDTLLEYSFPWLYQ 166
T A + A + T D+I A + L E P + Q
Sbjct: 223 TNLDLNPVAKDVHVAANDLLAGIDTQADIIVA------NILAEIIIPLVPQ 267
>gi|171319142|ref|ZP_02908263.1| Methyltransferase type 11 [Burkholderia ambifaria MEX-5]
gi|171095662|gb|EDT40621.1| Methyltransferase type 11 [Burkholderia ambifaria MEX-5]
Length = 250
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 21/78 (26%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+DLG G G + V + + + ++ +
Sbjct: 42 DGAVLDLGCGAGHASFAVA-----PHVRDVVAYDLAAPMLATVDAAARERGLANIRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P T D + +R
Sbjct: 97 PAERLPFDAGTFDWVVSR 114
>gi|218782700|ref|YP_002434018.1| methyltransferase type 11 [Desulfatibacillum alkenivorans AK-01]
gi|218764084|gb|ACL06550.1| Methyltransferase type 11 [Desulfatibacillum alkenivorans AK-01]
Length = 220
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G GGG + + + V+L E + +A+ ++ +R ++
Sbjct: 41 PEKGSLLDVGCGGGHILERLAEKFPQLTLAGVDLSEEQVNRAN---ERLRPYVSRTQIRQ 97
Query: 130 CRIQEAPQMITTCDVISA 147
P DVI +
Sbjct: 98 GSALNLPYPPDKFDVILS 115
>gi|42781670|ref|NP_978917.1| hypothetical protein BCE_2610 [Bacillus cereus ATCC 10987]
gi|42737593|gb|AAS41525.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 198
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FACRI 132
+DLGSG G I + ++ + G V ++ + + L+ ++ + I
Sbjct: 53 VLDLGSGVGRNSIPIAQKIQNTSGA-VTCVDLLHSALTKLQTYSKEYGVINNIKTEQAAI 111
Query: 133 QEAPQMITTCDVISARALADLD 154
+ T D I A++ L+
Sbjct: 112 ENYYIQPNTYDYIV--AVSSLE 131
>gi|28378631|ref|NP_785523.1| ribosomal protein L11 methyltransferase (putative) [Lactobacillus
plantarum WCFS1]
gi|38605251|sp|Q88VP9|PRMA_LACPL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|28271467|emb|CAD64372.1| ribosomal protein L11 methyltransferase (putative) [Lactobacillus
plantarum WCFS1]
Length = 316
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 21/111 (18%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L+ + + ID+G+G G + SI ++ G V + + + +
Sbjct: 165 CLQALETVINGGEHLIDVGTGSG----VLSIAAKAMGVGAVEAYDLDD-----VAVASAQ 215
Query: 121 TAARGKVFACRIQEAPQ-----MITTCDVISARALADLDTLLEYSFPWLYQ 166
T A + A + T D+I A + L E P + Q
Sbjct: 216 TNLDLNPVAKDVHVAANDLLAGIDTQADIIVA------NILAEIIIPLVPQ 260
>gi|268679452|ref|YP_003303883.1| methyltransferase [Sulfurospirillum deleyianum DSM 6946]
gi|268617483|gb|ACZ11848.1| methyltransferase [Sulfurospirillum deleyianum DSM 6946]
Length = 253
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
S +D+GSG G I ++ V I++ K + L+ Q G + +
Sbjct: 45 STLLDIGSGTGTFSIPLALLH-----VNVTAIDTSAKMLAILKEDAQNEGIEGFIKTYQS 99
Query: 133 Q-EAPQMITTCDVISA 147
++ + T D++ A
Sbjct: 100 DWDSFALTTPYDIVLA 115
>gi|239630123|ref|ZP_04673154.1| 16S RNA methylase RsmC [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301067273|ref|YP_003789296.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei str. Zhang]
gi|239527735|gb|EEQ66736.1| 16S RNA methylase RsmC [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439680|gb|ADK19446.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei str. Zhang]
Length = 198
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 14/113 (12%)
Query: 47 SSSTVEDFWIRHVED--S----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
++ + +H D S + +D+G+G G G+ + +
Sbjct: 28 RFTSDNGVFSKHTVDFGSRVLIATILAEELPTGPILDVGTGYGPIGLALAKHFPDRQ--- 84
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
V + + + + + A Q+ VI RA
Sbjct: 85 VTMSDVNERALALAQRNATDNAISNVTIVESSM-YDQIDGQFGVIVTNPPIRA 136
>gi|16760668|ref|NP_456285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29141573|ref|NP_804915.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213051785|ref|ZP_03344663.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213419807|ref|ZP_03352873.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E01-6750]
gi|213426496|ref|ZP_03359246.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213581390|ref|ZP_03363216.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
gi|213859592|ref|ZP_03385296.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|289827377|ref|ZP_06545997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|25513362|pir||AI0719 HemK protein, probable protoporphyrinogen oxidase hemK [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16502964|emb|CAD02130.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29137200|gb|AAO68764.1| HemK protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
Length = 277
Score = 35.1 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|306813370|ref|ZP_07447563.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli NC101]
gi|305854133|gb|EFM54572.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli NC101]
Length = 256
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVVA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|169795524|ref|YP_001713317.1| methyl transferase [Acinetobacter baumannii AYE]
gi|213158535|ref|YP_002319833.1| protein methylase, HemK family [Acinetobacter baumannii AB0057]
gi|215483011|ref|YP_002325216.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Acinetobacter baumannii AB307-0294]
gi|301344981|ref|ZP_07225722.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Acinetobacter baumannii AB056]
gi|301513509|ref|ZP_07238746.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Acinetobacter baumannii AB058]
gi|301597422|ref|ZP_07242430.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Acinetobacter baumannii AB059]
gi|332850712|ref|ZP_08432959.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
6013150]
gi|332866987|ref|ZP_08437304.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
6013113]
gi|169148451|emb|CAM86317.1| methyl transferase [Acinetobacter baumannii AYE]
gi|213057695|gb|ACJ42597.1| protein methylase, HemK family [Acinetobacter baumannii AB0057]
gi|213988463|gb|ACJ58762.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Acinetobacter baumannii AB307-0294]
gi|332730549|gb|EGJ61865.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
6013150]
gi|332734316|gb|EGJ65444.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
6013113]
Length = 271
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + V + + Q F
Sbjct: 104 LPKNANIVDLGTGTGAIALALASERPDW---FVTATDIYAPTLDVAKENAQTHGLHHVKF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
AC D+I +
Sbjct: 161 ACGAWFEALEPQQFDLIVS 179
>gi|167918950|ref|ZP_02506041.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei BCC215]
Length = 216
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 57 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 113
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 114 RAPDALAGLRAPDAVFVGGGVSR 136
>gi|150398714|ref|YP_001329181.1| Fmu (Sun) domain-containing protein [Sinorhizobium medicae WSM419]
gi|150030229|gb|ABR62346.1| Fmu (Sun) domain protein [Sinorhizobium medicae WSM419]
Length = 429
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+D +GGG G +I + G V+ ++ K+ + + +++ R
Sbjct: 228 FPREGEQVLDYCAGGG--GKTLAISAAMNNKGQVHAYDADRKRLAPIIERLKRAGTRNVQ 285
Query: 128 FACRIQEAPQMITTCDVI 145
++ D +
Sbjct: 286 VHETAGSLASLVGRADRV 303
>gi|256545371|ref|ZP_05472734.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Anaerococcus vaginalis ATCC 51170]
gi|256398932|gb|EEU12546.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Anaerococcus vaginalis ATCC 51170]
Length = 263
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 9/83 (10%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G+G G + S +++ + ++ K
Sbjct: 92 IINDNSNNKKILDIGTGSGAISLALS---KNLKDSKIIGVDISKNAIDLANENKIKLNIN 148
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
F + D+I +
Sbjct: 149 NVEFKE-SDIFSNIEEKFDIIVS 170
>gi|77408306|ref|ZP_00785048.1| tellurite resistance protein TehB [Streptococcus agalactiae COH1]
gi|77173069|gb|EAO76196.1| tellurite resistance protein TehB [Streptococcus agalactiae COH1]
Length = 291
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK L T + + L S +DLG G G + S+ G
Sbjct: 103 KKYGLT--RTHSEV--------IASAPLLSEKSNILDLGCGQGRNSLYLSLL-----GHQ 147
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++S + L + + + I + D I +
Sbjct: 148 VTSVDSNGQSLVALENMALEEELPYNIKRYDINTTA-IEGHYDFILS 193
>gi|303256803|ref|ZP_07342817.1| SmtA protein [Burkholderiales bacterium 1_1_47]
gi|302860294|gb|EFL83371.1| SmtA protein [Burkholderiales bacterium 1_1_47]
Length = 235
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 6/84 (7%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
F+ P S +D+G G GF ++ + G V + + ++ +
Sbjct: 38 FRQIPEVSKVLDIGCGPGFFSLLLASL-----GMNVTAADYSEGMLEKAKDLLNRNGYHD 92
Query: 126 KVFA-CRIQEAPQMITTCDVISAR 148
F Q P + D + +R
Sbjct: 93 VEFCRADAQHLPFADASFDAVVSR 116
>gi|297803090|ref|XP_002869429.1| hypothetical protein ARALYDRAFT_491807 [Arabidopsis lyrata subsp.
lyrata]
gi|297315265|gb|EFH45688.1| hypothetical protein ARALYDRAFT_491807 [Arabidopsis lyrata subsp.
lyrata]
Length = 390
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ I +D+G+G G I S+ + V +E A + +V+
Sbjct: 103 KFLIKDKIVLDVGAGTG----ILSLFCAKAGAAHVYAVECSQM-ADMAKEIVKANGFSDV 157
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E DVI +
Sbjct: 158 ITVLKGKIEEIELPTPKVDVIIS 180
>gi|258542538|ref|YP_003187971.1| cobalamin(vitamin B12) biosynthesis protein precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-01]
gi|256633616|dbj|BAH99591.1| cobalamin(vitamin B12) biosynthesis protein Precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-01]
gi|256636675|dbj|BAI02644.1| cobalamin(vitamin B12) biosynthesis protein Precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-03]
gi|256639728|dbj|BAI05690.1| cobalamin(vitamin B12) biosynthesis protein Precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-07]
gi|256642784|dbj|BAI08739.1| cobalamin(vitamin B12) biosynthesis protein Precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-22]
gi|256645839|dbj|BAI11787.1| cobalamin(vitamin B12) biosynthesis protein Precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-26]
gi|256648892|dbj|BAI14833.1| cobalamin(vitamin B12) biosynthesis protein Precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-32]
gi|256651879|dbj|BAI17813.1| cobalamin(vitamin B12) biosynthesis protein Precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654936|dbj|BAI20863.1| cobalamin(vitamin B12) biosynthesis protein Precorrin-6Y
C5,15-methyltransferase [Acetobacter pasteurianus IFO
3283-12]
Length = 414
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 10/93 (10%)
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ L P + D+G G G I + + IE++ ++ + +
Sbjct: 251 TLSSLAPRAGELLWDIGGGAGSISIEWMLASPACRA---VCIEAQPERVARIARNAAALG 307
Query: 123 ARG-KVFACRIQEAPQMITTCDVIS-----ARA 149
G V R E + + D I +RA
Sbjct: 308 VPGLNVRQARAPEGMEDLPKPDAIFIGGGASRA 340
>gi|254448386|ref|ZP_05061847.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[gamma proteobacterium HTCC5015]
gi|198261999|gb|EDY86283.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[gamma proteobacterium HTCC5015]
Length = 275
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 10/92 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+E SL++F DLG+G G G+ + L V +E + +
Sbjct: 98 IEHSLQLFGP-DSTIDIADLGAGSGCIGLTLAHCLPKAN---VLCVERSRDALAMIEKNR 153
Query: 119 QKTAARGKVFACRIQEAPQMI---TTCDVISA 147
Q+ A I+ D+I +
Sbjct: 154 QQLNINN---AKAIESNWCQDLGEQHFDLIIS 182
>gi|17381028|gb|AAL36326.1| putative arginine methyltransferase pam1 [Arabidopsis thaliana]
Length = 390
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ I +D+G+G G I S+ + V +E A + +V+
Sbjct: 103 KFLIKDKIVLDVGAGTG----ILSLFCAKAGAAHVYAVECSQM-ADMAKEIVKANGFSDV 157
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E DVI +
Sbjct: 158 ITVLKGKIEEIELPTPKVDVIIS 180
>gi|15233606|ref|NP_194680.1| PRMT11 (ARGININE METHYLTRANSFERASE 11); protein-arginine
N-methyltransferase [Arabidopsis thaliana]
gi|75208030|sp|Q9SU94|ANM11_ARATH RecName: Full=Protein arginine N-methyltransferase 1.1;
Short=AtPRMT11; AltName: Full=Arginine methyltransferase
pam1; AltName: Full=Histone-arginine N-methyltransferase
PRMT11
gi|5123545|emb|CAB45311.1| arginine methyltransferase (pam1) [Arabidopsis thaliana]
gi|7269850|emb|CAB79709.1| arginine methyltransferase (pam1) [Arabidopsis thaliana]
gi|21593404|gb|AAM65371.1| arginine methyltransferase pam1 [Arabidopsis thaliana]
gi|23297369|gb|AAN12952.1| arginine methyltransferase pam1 [Arabidopsis thaliana]
gi|332660238|gb|AEE85638.1| protein arginine N-methyltransferase 1 [Arabidopsis thaliana]
Length = 390
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ I +D+G+G G I S+ + V +E A + +V+
Sbjct: 103 KFLIKDKIVLDVGAGTG----ILSLFCAKAGAAHVYAVECSQM-ADMAKEIVKANGFSDV 157
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E DVI +
Sbjct: 158 ITVLKGKIEEIELPTPKVDVIIS 180
>gi|254247509|ref|ZP_04940830.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184]
gi|124872285|gb|EAY64001.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184]
Length = 250
Score = 35.1 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ +DLG G G + V + + + ++ +
Sbjct: 42 DAAVLDLGCGAGHASFAVA-----PHVRDVVAYDLAAPMLATVEAAARERGLANVRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P T D + +R
Sbjct: 97 PAERLPFDTATFDWVVSR 114
>gi|325288194|ref|YP_004263984.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Cellulophaga lytica DSM 7489]
gi|324323648|gb|ADY31113.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Cellulophaga lytica DSM 7489]
Length = 283
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G+G G I + ++ V ++ + + +
Sbjct: 111 VNQEIAILDIGTGSGCIAITLA---KNLPKAKVFALDISKEAILVAKSNAEANNVTVTFL 167
Query: 129 ACRIQEAPQMITTCDVISA 147
I E P + ++I +
Sbjct: 168 EQNILEEPSLKQKFNIIVS 186
>gi|320195321|gb|EFW69949.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
WV_060327]
Length = 343
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+ G+VFA + ++ D+I +
Sbjct: 244 SVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|303230423|ref|ZP_07317184.1| putative Cyclopropane-fatty-acyl-phospholipid synthase [Veillonella
atypica ACS-049-V-Sch6]
gi|302514962|gb|EFL56943.1| putative Cyclopropane-fatty-acyl-phospholipid synthase [Veillonella
atypica ACS-049-V-Sch6]
Length = 390
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L + +D+G G GF I + + ++G L E + KK +
Sbjct: 155 VHHILDKLYL----KEGMTLLDIGCGWGFLLIEAARKY-GVKGYGCTLSEEQWKKG---Q 206
Query: 116 YVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
+++ G+V I ++ T D I +
Sbjct: 207 ERIKEFGLEGQVEIELIDYRDVAASGRTFDRIVS 240
>gi|295096916|emb|CBK86006.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 257
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 23/78 (29%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+ +DLG G G + + V + ++ + +
Sbjct: 46 DAHVLDLGCGAGHASFTAA-----QQVAQVTAYDLSSQMLDVVAEAAKAKGLNNVTTRQG 100
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + +V+ +R
Sbjct: 101 YAESLPFEDASFEVVISR 118
>gi|254497862|ref|ZP_05110628.1| biotin synthase BioC [Legionella drancourtii LLAP12]
gi|254352940|gb|EET11709.1| biotin synthase BioC [Legionella drancourtii LLAP12]
Length = 286
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 12/80 (15%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK----NKKASFLRYVVQKTAARGKV 127
P +DLG G GF ++ + ++L ES KK S+ R + +
Sbjct: 44 PQRILDLGCGPGFFSRELALLYPKAQIVGLDLAESMLIQARKKHSWRR--------KWSL 95
Query: 128 FACRIQEAPQMITTCDVISA 147
A ++ P D++ A
Sbjct: 96 VAADMKNLPFATGAFDLVFA 115
>gi|238761895|ref|ZP_04622869.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
kristensenii ATCC 33638]
gi|238700009|gb|EEP92752.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
kristensenii ATCC 33638]
Length = 347
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVEDSLRVFQL----HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R DS L P+ +D+G G G + + ++ I+ L
Sbjct: 169 VKTLPGVFSRDSLDSGSYLLLSTFSEPFKGSILDVGCGAGVLASVLAPKMPKIKWT---L 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + +V A + + ++I +
Sbjct: 226 SDVSAAAIESSRATLAANNIDAQVIASNV--YSDIKGRFEMIIS 267
>gi|229161488|ref|ZP_04289469.1| hypothetical protein bcere0009_22750 [Bacillus cereus R309803]
gi|228622025|gb|EEK78870.1| hypothetical protein bcere0009_22750 [Bacillus cereus R309803]
Length = 195
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFAC 130
+DLGSG G I + I+ +S V+L++S K L+ ++ K
Sbjct: 15 VLDLGSGVGRNSIPLAQKIKNASGTITCVDLLDSALTK---LQTYSKEYGVIKNIKTEQA 71
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I+ T D I A++ L+
Sbjct: 72 AIENYYIAPNTYDYIV--AVSSLE 93
>gi|218548863|ref|YP_002382654.1| tellurite resistance protein TehB [Escherichia fergusonii ATCC
35469]
gi|218356404|emb|CAQ89027.1| putative AdoMet-dependent methyltransferase [Escherichia fergusonii
ATCC 35469]
Length = 198
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 15/103 (14%)
Query: 49 STVEDFWIRH--VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ + H V D+++V + P +DLG G G + + G V+ +
Sbjct: 10 TEKYELTRTHSEVLDAVKVVK----PGKTLDLGCGNGRNSLYLA-----ANGFDVDAWDK 60
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMI--TTCDVISA 147
+ + + RI + + D I +
Sbjct: 61 NAMSIANVERIKALEGLEN--LHTRIVDLNTLRFEGQYDFILS 101
>gi|28867727|ref|NP_790346.1| biotin synthesis protein BioC [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28850962|gb|AAO54041.1| biotin synthesis protein BioC [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 269
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLG G G+ + S EG +++ E LR+ Q
Sbjct: 45 LSRLPAGFTPSPWLDLGCGTGYFSRALARTFSQSEGIALDIAEGM------LRHA-QPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P C++I + L ++ +
Sbjct: 98 GAQHFVAGDAERLPLRDERCELI----FSSLAV--QWCADF 132
>gi|75906726|ref|YP_321022.1| hypothetical protein Ava_0503 [Anabaena variabilis ATCC 29413]
gi|75700451|gb|ABA20127.1| hypothetical protein Ava_0503 [Anabaena variabilis ATCC 29413]
Length = 278
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 15/108 (13%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGG 99
N + R V +L P + +++G G G + + +
Sbjct: 33 AYNRTRPRYPQQLVSR-------VVELAQLPQNAAILEVGCGPG----TATTAFAQLGFS 81
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+V L S+N +S L ++ +E P D + A
Sbjct: 82 MVCLEPSQN--SSQLAQQNCSPYPNVEIINTSFEEWPLEPGKFDAVLA 127
>gi|85706926|ref|ZP_01038016.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp. 217]
gi|85668537|gb|EAQ23408.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp. 217]
Length = 252
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + G V ++ + + ++ +
Sbjct: 70 RLLDIGCGGGLLSEPMARL-----GATVVGADAAPRNIPVAQVHAAQSGLDIDYRHTTAE 124
Query: 134 EAPQMITTCDVI 145
+ D +
Sbjct: 125 DLAAAGEQFDTV 136
>gi|330998941|ref|ZP_08322668.1| methyltransferase domain protein [Parasutterella excrementihominis
YIT 11859]
gi|329576155|gb|EGG57674.1| methyltransferase domain protein [Parasutterella excrementihominis
YIT 11859]
Length = 235
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 6/84 (7%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
F+ P S +D+G G GF ++ + G V + + ++ +
Sbjct: 38 FRQIPEVSKVLDIGCGPGFFSLLLASL-----GMNVTAADYSEGMLEKAKDLLNRNGYHD 92
Query: 126 KVFA-CRIQEAPQMITTCDVISAR 148
F Q P + D + +R
Sbjct: 93 VEFCRADAQHLPFADASFDAVVSR 116
>gi|322389373|ref|ZP_08062928.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
parasanguinis ATCC 903]
gi|321143942|gb|EFX39365.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
parasanguinis ATCC 903]
Length = 187
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 13/98 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+GSG G I ++ ++E V IE + + + +
Sbjct: 31 AKRMLDVGSGTGSVTIQAAVSFPNLE---VVAIEQNEDAVALTQENIDYFGCQNITLIK- 86
Query: 132 IQEAP-QMITTCDVISARAL----ADLDTLLEYSFPWL 164
+AP ++ D I + ++ + E+ L
Sbjct: 87 -GKAPVELEGQFDAIF---VGGTGGNMAEIFEWCEHLL 120
>gi|315651363|ref|ZP_07904388.1| cyclopropane-fatty-acyl-phospholipid synthase [Eubacterium
saburreum DSM 3986]
gi|315486322|gb|EFU76679.1| cyclopropane-fatty-acyl-phospholipid synthase [Eubacterium
saburreum DSM 3986]
Length = 388
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D +D+G G GF I + + + + S +KA F +
Sbjct: 153 VHHLLD----KMHLKEGMTILDIGCGWGFLLIEAA---KKYKVKGLGITLSHEQKAKFEQ 205
Query: 116 YVVQK-TAARGKVFACRIQEAPQMITTCDVISA 147
+ ++ +V ++ + T D I +
Sbjct: 206 KIKEEGLEDYLEVELMDYRDLLKTDRTFDSIVS 238
>gi|331645067|ref|ZP_08346178.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli M605]
gi|330909815|gb|EGH38325.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
AA86]
gi|331045824|gb|EGI17943.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli M605]
Length = 343
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+ G+VFA + ++ D+I +
Sbjct: 244 SVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|218703063|ref|YP_002410692.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
IAI39]
gi|226712941|sp|B7NVD9|RSMC_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|218373049|emb|CAR20939.1| 16S RNA m2G1207 methylase [Escherichia coli IAI39]
Length = 343
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+ G+VFA + ++ D+I +
Sbjct: 244 SVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|220916750|ref|YP_002492054.1| Methyltransferase type 12 [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954604|gb|ACL64988.1| Methyltransferase type 12 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 365
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G + + E + A R V + F
Sbjct: 181 DGISVLDVGCGSGRALTALARAYPRSRFTGHDFSEEAIRAA---RNVAAEHRLTNVEFDV 237
Query: 131 RIQEAPQMITTCDVISA 147
R P D+I+A
Sbjct: 238 RDAAGPVGEARYDLITA 254
>gi|222479671|ref|YP_002565908.1| Methyltransferase type 11 [Halorubrum lacusprofundi ATCC 49239]
gi|222452573|gb|ACM56838.1| Methyltransferase type 11 [Halorubrum lacusprofundi ATCC 49239]
Length = 288
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P +DLGSGGGF + + G V ++ + R V+K A
Sbjct: 97 AIASLEP-GETVLDLGSGGGFDCFLAA--REVGPDGRVIGVDMTPEMVERARENVEKNDA 153
Query: 124 RGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P + D I +
Sbjct: 154 DTVEFRLGEIEHLPVADESVDAIIS 178
>gi|91977843|ref|YP_570502.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisB5]
gi|123357306|sp|Q133Y8|PRMA_RHOPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|91684299|gb|ABE40601.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
palustris BisB5]
Length = 295
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 11/93 (11%)
Query: 62 SLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
L + L P +DLG+G G + +I + V + + + +
Sbjct: 141 CLTLLDLVLRAGPPRSVLDLGTGTG----VLAIAAAKALRQPVLATDIDRQSVAVAKENA 196
Query: 119 QKTAARGKVFACRI----QEAPQMITTCDVISA 147
+ V A D++ A
Sbjct: 197 RLNGVGNLVEAVHATGFSAPVFAAWGPFDLVLA 229
>gi|72388104|ref|XP_844476.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|62359376|gb|AAX79814.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801009|gb|AAZ10917.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 308
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI-QEAPQMITTC 142
F G+I + I+ KK +++ V + R +V A ++ ++ +
Sbjct: 19 FWGVIAETTHGDESLSTLKQIDCVVKKLNWMINVTEDLLLRARVHAEKVYKKKYLLEERY 78
Query: 143 DVISARALADLDTLLEYSFPWLYQKK 168
A + L Y P++ ++K
Sbjct: 79 --------AAWERLFVYVKPFMKKQK 96
>gi|29653699|ref|NP_819391.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii RSA
493]
gi|161829915|ref|YP_001596294.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii RSA
331]
gi|212213149|ref|YP_002304085.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii
CbuG_Q212]
gi|39932522|sp|Q820B5|UBIG_COXBU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|189037619|sp|A9NBI0|UBIG_COXBR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|226725539|sp|B6J1W2|UBIG_COXB2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|29540962|gb|AAO89905.1| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii RSA
493]
gi|161761782|gb|ABX77424.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii RSA
331]
gi|212011559|gb|ACJ18940.1| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii
CbuG_Q212]
Length = 234
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 41/138 (29%), Gaps = 29/138 (21%)
Query: 21 VSRETLEK--LEYFYFLFLKW-SKK--------INLVSSSTVEDFWIRHVEDSLRVFQLH 69
+S + ++K L F L W + IN V +E Q+
Sbjct: 3 LSEQNIDKEELAKFSDLAQDWWNPAGKMKPLHLINPVRLKYIEQ-------------QIT 49
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G GGG + G +V ++ + ++
Sbjct: 50 LKGKHVLDVGCGGGLLSEALA-----KHGAIVTGVDMSESLIDVAKNHAEQQQLNINYQC 104
Query: 130 CRIQEAPQMITTCDVISA 147
I+ + D+I+
Sbjct: 105 QDIEILTKDAQRFDIITC 122
>gi|295695862|ref|YP_003589100.1| ribosomal protein L11 methyltransferase [Bacillus tusciae DSM 2912]
gi|295411464|gb|ADG05956.1| ribosomal protein L11 methyltransferase [Bacillus tusciae DSM 2912]
Length = 348
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +D+G G G I S+ +++ G V ++ + R+ V+
Sbjct: 203 WLLDEVTPGCRVLDVGCGSG----ILSVSAAALGAGRVLAVDLDSLAVDAARHNVEVAGV 258
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+V R + D+I A LA L+E P
Sbjct: 259 ADRVEVRRGDLLDGIEERGDLIVANLLA---DLVERLLP 294
>gi|152993284|ref|YP_001359005.1| hypothetical protein SUN_1698 [Sulfurovum sp. NBC37-1]
gi|151425145|dbj|BAF72648.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 235
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 8/90 (8%)
Query: 61 DSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+ ++ +D+G G G ++ + ++I+ + K ++ RY
Sbjct: 15 DSIFLYDFIASFHPKGTLLDVGCGVGIISLLLTRDFK----VETSIIDKQEKMLNYARYN 70
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
K E D I +
Sbjct: 71 FSLNGLDVKSHLGDFTELVTEK-RFDYIVS 99
>gi|123443396|ref|YP_001007370.1| hypothetical protein YE3193 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090357|emb|CAL13225.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 256
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 22/79 (27%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +DLG G G + V + + + +V
Sbjct: 45 GDARLLDLGCGAGHASFTAAAA-----VESVVSYDLSAQMLDVVSRAATDKKLTNIEVKQ 99
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P + D++ +R
Sbjct: 100 GLAESLPFDDQSFDIVISR 118
>gi|26251256|ref|NP_757296.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
CFT073]
gi|227885143|ref|ZP_04002948.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
83972]
gi|300980808|ref|ZP_07175189.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
gi|301048334|ref|ZP_07195364.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
gi|331661001|ref|ZP_08361933.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli TA206]
gi|81472610|sp|Q8FA64|RSMC_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|26111689|gb|AAN83870.1|AE016772_48 Ribosomal RNA small subunit methyltransferase C [Escherichia coli
CFT073]
gi|227837972|gb|EEJ48438.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
83972]
gi|300299794|gb|EFJ56179.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
gi|300409125|gb|EFJ92663.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
gi|307556603|gb|ADN49378.1| 16S RNA G1207 methylase RsmC [Escherichia coli ABU 83972]
gi|315293340|gb|EFU52692.1| methyltransferase small domain protein [Escherichia coli MS 153-1]
gi|315298365|gb|EFU57620.1| methyltransferase small domain protein [Escherichia coli MS 16-3]
gi|331052043|gb|EGI24082.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli TA206]
Length = 343
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+ G+VFA + ++ D+I +
Sbjct: 244 SVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|239907763|ref|YP_002954504.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1]
gi|239797629|dbj|BAH76618.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1]
Length = 301
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 59 VED-SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ D SL +F + + DLG+G G + +++ G ++L + + V
Sbjct: 119 IIDRSLELFPAGEL-TSFADLGTGSGCLAVTLAVRFPGATGLALDL-SPEALAVARQNAV 176
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ A R F + P ++ +
Sbjct: 177 RHQVAQRLTFFEADFADLPAHGEGYGLVVS 206
>gi|254578484|ref|XP_002495228.1| ZYRO0B06336p [Zygosaccharomyces rouxii]
gi|238938118|emb|CAR26295.1| ZYRO0B06336p [Zygosaccharomyces rouxii]
Length = 302
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
DS +L +D+G GGG + + V+L K A + +
Sbjct: 102 LDSKINEKLKDAQFNVLDIGCGGGILAECLARLPITRHVTGVDLTPDVIKVAR--EHSAK 159
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
A GK R+Q ++ T D+++
Sbjct: 160 DPALSGK-LEYRLQALEEVEGTYDLVTC 186
>gi|237737246|ref|ZP_04567727.1| precorrin-8W decarboxylase [Fusobacterium mortiferum ATCC 9817]
gi|229421108|gb|EEO36155.1| precorrin-8W decarboxylase [Fusobacterium mortiferum ATCC 9817]
Length = 186
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
SI ID+G+G G GI + LS G V IE + K ++ V+K ++
Sbjct: 33 NSILIDVGAGTGTIGIECATYLSD---GKVIGIEKEEKGLETIKENVRKFNLTNYELIHG 89
Query: 131 RIQEAPQMITTCD 143
R E+ + D
Sbjct: 90 RAPESIPNVE-YD 101
>gi|184158673|ref|YP_001847012.1| methylase of polypeptide chain release factor [Acinetobacter
baumannii ACICU]
gi|332874368|ref|ZP_08442279.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
6014059]
gi|183210267|gb|ACC57665.1| Methylase of polypeptide chain release factor [Acinetobacter
baumannii ACICU]
gi|322507516|gb|ADX02970.1| Methyl transferase [Acinetobacter baumannii 1656-2]
gi|323518588|gb|ADX92969.1| methylase of polypeptide chain release factor [Acinetobacter
baumannii TCDC-AB0715]
gi|332737447|gb|EGJ68363.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
6014059]
Length = 271
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + V + + Q F
Sbjct: 104 LPKNANIVDLGTGTGAIALALASERPDW---FVTATDIYAPTLDVAKENAQTHGLHHVKF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
AC D+I +
Sbjct: 161 ACGAWFEALEPQQFDLIVS 179
>gi|159036914|ref|YP_001536167.1| methyltransferase type 11 [Salinispora arenicola CNS-205]
gi|157915749|gb|ABV97176.1| Methyltransferase type 11 [Salinispora arenicola CNS-205]
Length = 274
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L +DLG G G P I + +IE +++ + ++A R V
Sbjct: 51 DKLADLLTIEAGDRVLDLGCGIGEPAIRLATAH-TIEVVGISISGRQVERAQE-RAVSAG 108
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
A R + P + D++ A
Sbjct: 109 LADRLSFELADAMDLPYPEESFDIVWA 135
>gi|2498761|sp|Q00316|PX11A_CANBO RecName: Full=Peroxisomal membrane protein PMP30A; AltName:
Full=Peroxin-11A; AltName: Full=Peroxisomal membrane
protein PMP31
gi|457391|gb|AAA66346.1| peroxisomal membrane protein 31 [Candida boidinii]
Length = 256
Score = 34.7 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 34 FLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGG-GFPGIITSIQ 92
L LK ++KINL D + ++V DSL + S IDL G GF GIITSI
Sbjct: 195 ELILKNNEKINL----NKRDLF-KNVLDSLIALK----GSQLIDLNDGVLGFAGIITSII 245
>gi|330831275|ref|YP_004394227.1| ribosomal RNA small subunit methyltransferase C [Aeromonas veronii
B565]
gi|328806411|gb|AEB51610.1| Ribosomal RNA small subunit methyltransferase C [Aeromonas veronii
B565]
Length = 342
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + P +D G G G G + + + ++ VN+++ R + +
Sbjct: 196 LAAVPPMKGELLDFGCGAGVIGSVLAKRNPELQ---VNMVDISALALESSRRTLAINGLQ 252
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
GKV A + + T I +
Sbjct: 253 GKVTASDV--YSDLSTRFQHIVS 273
>gi|330828703|ref|YP_004391655.1| protein-(glutamine-N5) methyltransferase [Aeromonas veronii B565]
gi|328803839|gb|AEB49038.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
[Aeromonas veronii B565]
Length = 283
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 8/89 (8%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ++ P +DLG+G G + + I+ V ++ A+ R
Sbjct: 102 ALTRIPQGPCAVLDLGTGTGAIALALKSERPEID---VWAVDRMADAAALARENSVALGL 158
Query: 124 RGKVFACR-----IQEAPQMITTCDVISA 147
+V + VI +
Sbjct: 159 PIEVRDGSWFEPLGEPDRDETPRFAVIVS 187
>gi|319763151|ref|YP_004127088.1| methyltransferase type 11 [Alicycliphilus denitrificans BC]
gi|330825214|ref|YP_004388517.1| type 11 methyltransferase [Alicycliphilus denitrificans K601]
gi|317117712|gb|ADV00201.1| Methyltransferase type 11 [Alicycliphilus denitrificans BC]
gi|329310586|gb|AEB85001.1| Methyltransferase type 11 [Alicycliphilus denitrificans K601]
Length = 264
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFA 129
+D+G G G + + V ++ LR + + +
Sbjct: 57 GAESLLDVGCGPGTIALAVA-----PRLRRVVGLDYSAAMLDALRALAAEQGLQHVETLH 111
Query: 130 CRIQEAPQMITTCDVIS-ARA 149
++ + CDV +RA
Sbjct: 112 RAWEDDWSDVPVCDVAVASRA 132
>gi|256828994|ref|YP_003157722.1| type 11 methyltransferase [Desulfomicrobium baculatum DSM 4028]
gi|256578170|gb|ACU89306.1| Methyltransferase type 11 [Desulfomicrobium baculatum DSM 4028]
Length = 239
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P +D+G G G + +++ ++ L++L +A + V +T ++
Sbjct: 53 PKARRVLDIGCGAGNATLSLLRRINPLDCDLLDLSNKMLHRAQ--QRVSAETTGVVRIIQ 110
Query: 130 CRIQEAPQMITTCDVISA 147
+ A DV+ A
Sbjct: 111 ADFRSADLPRNHYDVVLA 128
>gi|118445038|ref|YP_879045.1| precorrin-6B methylase/decarboxylase cbiT/cbiE [Clostridium novyi
NT]
gi|118135494|gb|ABK62538.1| precorrin-6B methylase/decarboxylase cbiT/cbiE [Clostridium novyi
NT]
Length = 192
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 12/102 (11%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQL-HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
S T E+ I L + ++ S +D+G+G G I S G V +E
Sbjct: 14 SPMTKEEVRI------LSISKMGVDENSTVLDVGAGTGSISIQLS---KICNKGEVIAVE 64
Query: 106 SKNKKASFLRYVVQKTAARG--KVFACRIQEAPQMITTCDVI 145
+ K + +K +A + ++ + + D I
Sbjct: 65 KEEKAVKLINKNKEKFSAHNLKIIKGEALEVCESIKSKFDAI 106
>gi|220908408|ref|YP_002483719.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
gi|219865019|gb|ACL45358.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
Length = 263
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P+ +DLG G G ++ + E ++L +A + + +
Sbjct: 99 PTRILDLGCGTGTATLMLKQAVPRAEVTGLDLSPYMLSRAI---HKTRAAGLEVEFVQGN 155
Query: 132 IQEAPQMITTCDVISA 147
+ + D++ A
Sbjct: 156 AECTHFATESFDLVVA 171
>gi|157147194|ref|YP_001454513.1| hypothetical protein CKO_02973 [Citrobacter koseri ATCC BAA-895]
gi|157084399|gb|ABV14077.1| hypothetical protein CKO_02973 [Citrobacter koseri ATCC BAA-895]
Length = 256
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFACR 131
+ +D+G G G I + V + ++ + ++
Sbjct: 46 ASVLDMGCGAGHASFIAA-----QNVKQVVAYDLSSQMLEVVVQAAKEKGLENIATRQGY 100
Query: 132 IQEAPQMITTCDVISAR 148
+ P DV+ +R
Sbjct: 101 AENLPFEDHAFDVVISR 117
>gi|148378278|ref|YP_001252819.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
gi|153930927|ref|YP_001382679.1| alanine racemase [Clostridium botulinum A str. ATCC 19397]
gi|153935439|ref|YP_001386230.1| alanine racemase [Clostridium botulinum A str. Hall]
gi|148287762|emb|CAL81828.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
gi|152926971|gb|ABS32471.1| alanine racemase [Clostridium botulinum A str. ATCC 19397]
gi|152931353|gb|ABS36852.1| alanine racemase [Clostridium botulinum A str. Hall]
Length = 404
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 11/47 (23%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQL 68
+ E +K FY+ + K+N I+H+ +S + L
Sbjct: 186 TNEQFKKFLDFYYKLRDKNVKVN-----------IKHIANSAALIDL 221
>gi|170733767|ref|YP_001765714.1| methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
gi|169817009|gb|ACA91592.1| Methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
Length = 250
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ +DLG G G + V + + + ++ +
Sbjct: 42 DAAVLDLGCGAGHASFAVA-----PHVRDVVAYDLAAPMLATVEAAARERGLANVRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P T D + +R
Sbjct: 97 PAERLPFDTATFDWVVSR 114
>gi|187478160|ref|YP_786184.1| hypothetical protein BAV1666 [Bordetella avium 197N]
gi|115422746|emb|CAJ49274.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 454
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+ ++LG G + ++ V ++ + + + + V+ + ++
Sbjct: 53 ARVLELGCAAGGNLLPFALMYPE---ATVVGVDLSSVQVAQGQEVINDLGVKNMQLHTMS 109
Query: 132 IQEAPQMITTCDVISA 147
+ + D I A
Sbjct: 110 LTDITPAFGQFDYIVA 125
>gi|70606601|ref|YP_255471.1| hypothetical protein Saci_0810 [Sulfolobus acidocaldarius DSM 639]
gi|68567249|gb|AAY80178.1| conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 187
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P I D+G G G GI ++ +++ V +I+ K F V K ++
Sbjct: 42 VLPNHGIVADIGCGYGPIGIYIALVNQNLK---VYMIDVDKKAIYFTSKNVSKYNLSNRI 98
>gi|84496661|ref|ZP_00995515.1| S-adenosylmethionine-dependent methyltransferase [Janibacter sp.
HTCC2649]
gi|84383429|gb|EAP99310.1| S-adenosylmethionine-dependent methyltransferase [Janibacter sp.
HTCC2649]
Length = 259
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 18/112 (16%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G GF + +I G + + + R ++
Sbjct: 34 AIAEFGDRTLRILDVGGADGFETLPYAI-----RGHQLTVADPAEGFFDRGREAAEQLGV 88
Query: 124 RGKV--FACRIQEAP-QMITTCDVISARAL----------ADLDTLLEYSFP 162
+V + ++E P T DV+ + AD+ TL + P
Sbjct: 89 SDRVRWVSAGLEELPMAGDTAYDVVVCHFVLHYRPAGSLGADVATLSRLTAP 140
>gi|107023364|ref|YP_621691.1| methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
gi|116690447|ref|YP_836070.1| methyltransferase type 11 [Burkholderia cenocepacia HI2424]
gi|105893553|gb|ABF76718.1| Methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
gi|116648536|gb|ABK09177.1| Methyltransferase type 11 [Burkholderia cenocepacia HI2424]
Length = 250
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ +DLG G G + V + + + ++ +
Sbjct: 42 DAAVLDLGCGAGHASFAVA-----PHVRDVVAYDLAAPMLATVEAAARERGLANVRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P T D + +R
Sbjct: 97 PAERLPFDTATFDWVVSR 114
>gi|322795848|gb|EFZ18527.1| hypothetical protein SINV_15635 [Solenopsis invicta]
Length = 349
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFLRYVVQKTAARGKVFA 129
I +D+G+G G I SI + + V +E S K+ + + +V
Sbjct: 39 QDKIVMDIGAGSG----ILSIFCAQVGAKKVYAVEASILAKSIDQVSIENNVQDKVEVIH 94
Query: 130 CRIQE-APQMITTCDVISA 147
++++ P + D+I +
Sbjct: 95 SKVEDIRPGSLENVDIIIS 113
>gi|294785453|ref|ZP_06750741.1| precorrin-8W decarboxylase [Fusobacterium sp. 3_1_27]
gi|294487167|gb|EFG34529.1| precorrin-8W decarboxylase [Fusobacterium sp. 3_1_27]
Length = 189
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P SI ID+G+G G GI + + G V IE + K ++ +K
Sbjct: 23 ISIAKLMLKPNSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIKLNAEKF 79
Query: 122 AARG-KVFACRIQEAPQMITTCD 143
++ + +A I + D
Sbjct: 80 NLDNFELIHGKAPDAIPDI-SYD 101
>gi|302508145|ref|XP_003016033.1| hypothetical protein ARB_05430 [Arthroderma benhamiae CBS 112371]
gi|291179602|gb|EFE35388.1| hypothetical protein ARB_05430 [Arthroderma benhamiae CBS 112371]
Length = 337
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ R D++ + + +D+G G G + +++ + V++ K
Sbjct: 32 KDEVRTRSYRDAIYNSKHLFKDKVVLDVGCGTGILSM-FAVKAGAKHVIGVDMSSIIGKA 90
Query: 111 ASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
R +V+ K+ +++E D+I +
Sbjct: 91 ----REIVEANGMSDKITLLQGKMEEVELPFPKVDIIIS 125
>gi|291281027|ref|YP_003497845.1| Methyltransferase, UbiE/COQ5 family [Escherichia coli O55:H7 str.
CB9615]
gi|209745530|gb|ACI71072.1| putative biotin synthesis protein [Escherichia coli]
gi|290760900|gb|ADD54861.1| Methyltransferase, UbiE/COQ5 family [Escherichia coli O55:H7 str.
CB9615]
gi|320654625|gb|EFX22626.1| Methyltransferase, UbiE/COQ5 family protein [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320660193|gb|EFX27703.1| Methyltransferase, UbiE/COQ5 family protein [Escherichia coli
O55:H7 str. USDA 5905]
Length = 256
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVCLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAQMLDVVAQAAEVRQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|88603253|ref|YP_503431.1| hypothetical protein Mhun_2002 [Methanospirillum hungatei JF-1]
gi|88188715|gb|ABD41712.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
Length = 289
Score = 34.7 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRY 116
+ L +P S +D+G G G I + + + ++ +++ K +R
Sbjct: 56 FFNLLEEAGFNPVGSRILDIGCGPGTLSIPLAQAGADVTSLDISSGMLDRL--KEVAVRD 113
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ T + I + + D++ A
Sbjct: 114 NLSITPVECSWWTADI-DTLGFRNSFDLVIA 143
>gi|319740475|gb|ADV60531.1| arg methyltransferase [Prismosticta fenestrata]
Length = 244
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ +D+G G G I S+ + V IE N + R +++
Sbjct: 18 KHLFKGKTVLDIGCGTG----ILSMFAAKAGAAKVIAIECSN-IVDYARKIIEANRLSDV 72
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
++ +++E + D+I +
Sbjct: 73 IEIVKGKVEEVELSVEKVDIIIS 95
>gi|303228728|ref|ZP_07315548.1| putative Cyclopropane-fatty-acyl-phospholipid synthase [Veillonella
atypica ACS-134-V-Col7a]
gi|302516602|gb|EFL58524.1| putative Cyclopropane-fatty-acyl-phospholipid synthase [Veillonella
atypica ACS-134-V-Col7a]
Length = 390
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L + +D+G G GF I + + ++G L E + KK +
Sbjct: 155 VHHILDKLYL----KEGMTLLDIGCGWGFLLIEAARKY-GVKGYGCTLSEEQWKKG---Q 206
Query: 116 YVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
+++ G+V I ++ T D I +
Sbjct: 207 ERIKEFGLEGQVEIELIDYRDVAASGRTFDRIVS 240
>gi|238651077|ref|YP_002916935.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia peacockii
str. Rustic]
gi|238625175|gb|ACR47881.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia peacockii
str. Rustic]
Length = 289
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + +G V I++ ++ + I+E
Sbjct: 105 ILDVGCGGGLIATPLA-----AQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEE 159
Query: 135 APQMITTCDVISA 147
DV+
Sbjct: 160 LESDKL-YDVVIC 171
>gi|256390789|ref|YP_003112353.1| methyltransferase type 11 [Catenulispora acidiphila DSM 44928]
gi|256357015|gb|ACU70512.1| Methyltransferase type 11 [Catenulispora acidiphila DSM 44928]
Length = 229
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 9/82 (10%)
Query: 68 LHPYPSIWIDLGSGGG--FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L I++G+G G FP ++ V +E + + +
Sbjct: 35 LADLSGDVIEVGAGNGLNFPRYPHAV-------DRVVAVEPEPDLRALAERAARSAPVPV 87
Query: 126 KVFACRIQEAPQMITTCDVISA 147
+V R + P + D A
Sbjct: 88 QVVEGRAEALPFPDGSFDAAVA 109
>gi|195999946|ref|XP_002109841.1| hypothetical protein TRIADDRAFT_53136 [Trichoplax adhaerens]
gi|190587965|gb|EDV28007.1| hypothetical protein TRIADDRAFT_53136 [Trichoplax adhaerens]
Length = 414
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 27/89 (30%)
Query: 21 VSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+ +TL+KL+ + K++K IN +H D + + L SI+
Sbjct: 126 LDDQTLQKLKKYETDLRKYNKLIN------------KHEYDDMSLEDLDNSGSIY----- 168
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNK 109
I +S ++ V ++E NK
Sbjct: 169 ----------ILISKLKKKSVAIVEKINK 187
>gi|157961887|ref|YP_001501921.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella pealeana
ATCC 700345]
gi|189037628|sp|A8H499|UBIG_SHEPA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|157846887|gb|ABV87386.1| ubiquinone biosynthesis O-methyltransferase [Shewanella pealeana
ATCC 700345]
Length = 236
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 4/77 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G GGG + +++ G + + L V+ + A
Sbjct: 51 FGKQVLDVGCGGGILSESMARIGANVTGLDMGDEPLDVARLHALETGVEINYIKNTAEAH 110
Query: 131 RIQEAPQMITTCDVISA 147
R + DV++
Sbjct: 111 RDE----HRGQYDVVTC 123
>gi|159899618|ref|YP_001545865.1| rRNA (guanine-N(2)-)-methyltransferase [Herpetosiphon aurantiacus
ATCC 23779]
gi|159892657|gb|ABX05737.1| rRNA (guanine-N(2)-)-methyltransferase [Herpetosiphon aurantiacus
ATCC 23779]
Length = 365
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 6/88 (6%)
Query: 62 SLRVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
S + +DLG G G G+ + I+S + +Q
Sbjct: 211 SAMLLDAVHIQANQRVLDLGCGAGILGMFLQ---QRESTLALTYIDSTMVAIEATKRNLQ 267
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
G+V A +A D++ +
Sbjct: 268 TNQLTGRVLASDGIQAVNG-EQFDLVVS 294
>gi|193063175|ref|ZP_03044266.1| methyltransferase, UbiE/COQ5 family [Escherichia coli E22]
gi|194427552|ref|ZP_03060100.1| methyltransferase, UbiE/COQ5 family [Escherichia coli B171]
gi|260842436|ref|YP_003220214.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O103:H2 str. 12009]
gi|192931083|gb|EDV83686.1| methyltransferase, UbiE/COQ5 family [Escherichia coli E22]
gi|194414322|gb|EDX30596.1| methyltransferase, UbiE/COQ5 family [Escherichia coli B171]
gi|257757583|dbj|BAI29080.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O103:H2 str. 12009]
gi|323160261|gb|EFZ46218.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
E128010]
Length = 256
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVCLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|323963759|gb|EGB59261.1| methyltransferase domain-containing protein [Escherichia coli M863]
gi|327254929|gb|EGE66539.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
STEC_7v]
Length = 256
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 10/104 (9%), Positives = 27/104 (25%), Gaps = 15/104 (14%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
S ++ R + + +D+G G G + + V +
Sbjct: 28 TSGRDLQRLAER-------LADYPD--ASVLDMGCGAGHASFVAA-----QNVSAVVAYD 73
Query: 106 SKNKKASFLRYVVQKTAARG-KVFACRIQEAPQMITTCDVISAR 148
+ + + + + P D++ +R
Sbjct: 74 LSAQMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISR 117
>gi|293371695|ref|ZP_06618106.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides ovatus SD CMC 3f]
gi|292633392|gb|EFF51962.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Bacteroides ovatus SD CMC 3f]
Length = 278
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + P +D+G+G G I +L E V + + + R A
Sbjct: 103 IVEESPNARRLLDIGTGSGCIAISLDKKLPDAE---VEAWDISEEALAIARKNNDALEAG 159
Query: 125 GKVFACRI-QEAPQMITTCDVISA 147
+ + + + + + DVI +
Sbjct: 160 VRFLQRDVLSDDWEKVPSFDVIVS 183
>gi|296824204|ref|XP_002850603.1| histone H4 arginine methyltransferase RmtA [Arthroderma otae CBS
113480]
gi|238838157|gb|EEQ27819.1| histone H4 arginine methyltransferase RmtA [Arthroderma otae CBS
113480]
Length = 348
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ R D++ + + +D+G G G + +++ + V++ K
Sbjct: 43 KDEVRTRSYRDAIYNSKHLFKDKVVLDVGCGTGILSM-FAVKAGAKHVIGVDMSSIIGKA 101
Query: 111 ASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
R +VQ K+ +++E D+I +
Sbjct: 102 ----REIVQANGMSDKITLLQGKMEEVELPFPKVDIIIS 136
>gi|218290966|ref|ZP_03495014.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius LAA1]
gi|218239048|gb|EED06252.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius LAA1]
Length = 189
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 12/93 (12%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V D+L V H ID+G+G G+ + + G V ++ + L
Sbjct: 27 VLDALDVQAHHD----VIDIGAGPGYFALPLA----RRTRGKVFAVDLSPEMLQMLSERA 78
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALA 151
+++ + + P + D RAL
Sbjct: 79 RESGVSIEAHQAPAERLPLEDASVD----RALM 107
>gi|7800799|emb|CAB91258.1| related to protein arginine N-methyltransferase 3 [Neurospora
crassa]
Length = 521
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 7/78 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-- 129
+ +D+G G G I S+ + V ++ R + +
Sbjct: 211 GKVVLDIGCGTG----ILSMFCAKAGAKQVIAVDRSE-IIDKARENIYANGLSDVIVTLK 265
Query: 130 CRIQEAPQMITTCDVISA 147
RI+E + D+I +
Sbjct: 266 GRIEEVILPVEKVDIIVS 283
>gi|331697964|ref|YP_004334203.1| type 11 methyltransferase [Pseudonocardia dioxanivorans CB1190]
gi|326952653|gb|AEA26350.1| Methyltransferase type 11 [Pseudonocardia dioxanivorans CB1190]
Length = 360
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 9/86 (10%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P + +DLG G G ++ + E ++L LR ++A
Sbjct: 163 TALPELPEATRVVDLGCGFGKSTRPLKLRYPTAEVIGIDLAAPN------LRLAHAESAD 216
Query: 124 RGKVFACRIQEAPQM---ITTCDVIS 146
G + R +A +CDV++
Sbjct: 217 AGIEVSYRQADARSTGLDADSCDVVT 242
>gi|325497299|gb|EGC95158.1| tellurite resistance protein TehB [Escherichia fergusonii ECD227]
Length = 198
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 15/103 (14%)
Query: 49 STVEDFWIRH--VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ + H V D+++V + P +DLG G G + + G V+ +
Sbjct: 10 TEKYELTRTHSEVLDAVKVVK----PGKTLDLGCGNGRNSLYLA-----ANGFDVDAWDK 60
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMI--TTCDVISA 147
+ + + RI + + D I +
Sbjct: 61 NAMSIANVERIKALEGLEN--LHTRIVDLNTLRFEGQYDFILS 101
>gi|297543675|ref|YP_003675977.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296841450|gb|ADH59966.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 279
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 43/159 (27%), Gaps = 36/159 (22%)
Query: 12 ANYLLNTYNVSRETLEKLEYF---------------------YFLFLKWSKKINLVSSST 50
A +L +S+E LE+ F F+ + I
Sbjct: 39 ALFLRREEEISKEQLERFLEFINMRKSHIPYQYIVKKQYFMGLEFFVDENVLI----PRP 94
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ + + + +D+G+G G + + V ++ K
Sbjct: 95 ETEILVE------ETLKRLKRGDVVLDIGTGSGAIAVSIAKYFPDC---TVYAVDISKKA 145
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMIT--TCDVISA 147
++ +K ++F + D I +
Sbjct: 146 IEIAKHNAKKQGVLDRIFFIESDLFCNLPPNLKFDFIVS 184
>gi|271965060|ref|YP_003339256.1| 3-demethylubiquinone-9 3-methyltransferase protein
[Streptosporangium roseum DSM 43021]
gi|270508235|gb|ACZ86513.1| 3-demethylubiquinone-9 3-methyltransferase protein
[Streptosporangium roseum DSM 43021]
Length = 280
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D+L + ID+G G G ++ L+ + G +V ++ + +
Sbjct: 30 LADTLAGALMLDGRGRLIDVGCGPG----TLAVDLAHLFGEIVG-VDPDSGMIAEAARRA 84
Query: 119 QKTAARGKV--FACRIQEAPQMITTCDVIS 146
+ GK R ++ P + T V +
Sbjct: 85 AEAGVTGKARWVRARAEDLPAGLGTFTVAT 114
>gi|226713005|sp|B6EL06|RSMC_ALISL RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
Length = 339
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I +++++ + ++
Sbjct: 191 LLLQTLPSLRGHVLDFGCGAGVLGSVMKTINPKIH---LDMVDISAFAIASSIETLKANG 247
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G VFA + I +
Sbjct: 248 LEGNVFASDV--YSDTKQNYQFIVS 270
>gi|237654104|ref|YP_002890418.1| ribosomal protein L11 methyltransferase [Thauera sp. MZ1T]
gi|237625351|gb|ACR02041.1| ribosomal protein L11 methyltransferase [Thauera sp. MZ1T]
Length = 300
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 8/84 (9%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ ++ +D G G G I I + + G V I+ K R + A
Sbjct: 159 WLCEVVTPGCSVLDYGCGSG----ILGIAAAKLGAGAVLGIDIDEKAVEAARDNAARNHA 214
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ A + T D++ A
Sbjct: 215 AVRLQHS----AVPVGDTFDLVVA 234
>gi|225848651|ref|YP_002728814.1| SAM-dependent methyltransferase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644243|gb|ACN99293.1| SAM-dependent methyltransferase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 254
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 60 EDSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + IDLG+G G I+ S++ +I+ +E + +
Sbjct: 37 IDSLLLSDFVNIKSSGKLIDLGTGSGIILILLSLKYKNIQ---FYGLEVQQDLYQLAQKN 93
Query: 118 VQKTAARGKVFACRIQEAPQMITT--CDVIS 146
++ + + ++E + D +
Sbjct: 94 IKLNNVKADLKLGDVKEVKKFYEHQYFDYVV 124
>gi|209695991|ref|YP_002263921.1| ribosomal RNA small subunit methyltransferase C (16S rRNA m2G120
methyltransferase) [Aliivibrio salmonicida LFI1238]
gi|208009944|emb|CAQ80258.1| ribosomal RNA small subunit methyltransferase C (16S rRNA m2G120
methyltransferase) [Aliivibrio salmonicida LFI1238]
Length = 353
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D G G G G + I +++++ + ++
Sbjct: 205 LLLQTLPSLRGHVLDFGCGAGVLGSVMKTINPKIH---LDMVDISAFAIASSIETLKANG 261
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G VFA + I +
Sbjct: 262 LEGNVFASDV--YSDTKQNYQFIVS 284
>gi|126178839|ref|YP_001046804.1| methyltransferase type 11 [Methanoculleus marisnigri JR1]
gi|125861633|gb|ABN56822.1| Methyltransferase type 11 [Methanoculleus marisnigri JR1]
Length = 249
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 9/77 (11%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNL----IESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G + + V++ ++ ++A R
Sbjct: 40 ILDIGCGAGMQTVELARICPGCHITAVDIHQPFLDDLARRA-----ASAGVGDRITTVRA 94
Query: 131 RIQEAPQMITTCDVISA 147
+ + P + DV+ A
Sbjct: 95 SMDDLPSPDASFDVLWA 111
>gi|20089195|ref|NP_615270.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
gi|19914069|gb|AAM03750.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
Length = 253
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 17/112 (15%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ W R + SL L P +D+G G G++ + G V ++ K
Sbjct: 36 EREAWKR-IFKSL----LPPGRLKVLDVGCGTCEIGLLFAEM-----GHQVTGLDLSEKM 85
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ R + + P T DV+ R L ++ P
Sbjct: 86 LAKAREKASRKGFDSVFEKGDAEAPPFEEDTFDVVVNR-------HLLWTLP 130
>gi|90422035|ref|YP_530405.1| HemK family modification methylase [Rhodopseudomonas palustris
BisB18]
gi|90104049|gb|ABD86086.1| modification methylase, HemK family [Rhodopseudomonas palustris
BisB18]
Length = 291
Score = 34.7 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L++F P P DLG+G G I+ ++ + V + R +
Sbjct: 112 LQLFAGRPAPQRIADLGTGSG--AILLALLSEWPQACGVAS-DISVAALHTARANAARLG 168
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ A + D+I +
Sbjct: 169 LGDRAAFVACDYASALRGPFDLIVS 193
>gi|330718475|ref|ZP_08313075.1| cyclopropane-fatty-acyl-phospholipid synthase [Leuconostoc fallax
KCTC 3537]
Length = 398
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ + L V +D+G G G + + + ++ V L ++ +
Sbjct: 153 VHHILNKLNVKP----GETLLDIGCGWGTLVLTAAKEY-GLKATGVTL---SQQQYDLVN 204
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ G+V +++ ++ D I++
Sbjct: 205 QKIAAEGLEGQVSVI-LEDYREVKQQYDHITS 235
>gi|300905647|ref|ZP_07123393.1| methyltransferase domain protein [Escherichia coli MS 84-1]
gi|301305767|ref|ZP_07211853.1| methyltransferase domain protein [Escherichia coli MS 124-1]
gi|300402539|gb|EFJ86077.1| methyltransferase domain protein [Escherichia coli MS 84-1]
gi|300838942|gb|EFK66702.1| methyltransferase domain protein [Escherichia coli MS 124-1]
gi|315253524|gb|EFU33492.1| methyltransferase domain protein [Escherichia coli MS 85-1]
Length = 256
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|261863836|gb|ACY01395.1| O-methyl transferase [Streptomyces platensis subsp. rosaceus]
Length = 281
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 6/81 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G P + + G V I + + + + +V
Sbjct: 72 IDQGQRVLDVGCGVGQPAMRIA----RRTGAHVTGIAISKDQIARATALAEGAGLSDRVE 127
Query: 129 --ACRIQEAPQMITTCDVISA 147
E P + D A
Sbjct: 128 FRHADAMELPFPDDSFDAAIA 148
>gi|300025025|ref|YP_003757636.1| ubiquinone biosynthesis O-methyltransferase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526846|gb|ADJ25315.1| ubiquinone biosynthesis O-methyltransferase [Hyphomicrobium
denitrificans ATCC 51888]
Length = 259
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + G V I+ + + + + R++
Sbjct: 76 TALDIGCGGGLVAEPLTRM-----GATVTAIDPSERNIAIAKSHAEAQGLAIDYRPVRVE 130
Query: 134 EAPQMITTCDVI 145
+ T D++
Sbjct: 131 DLVAEGRTFDIV 142
>gi|226363099|ref|YP_002780881.1| methyltransferase [Rhodococcus opacus B4]
gi|226241588|dbj|BAH51936.1| putative methyltransferase [Rhodococcus opacus B4]
Length = 226
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 3/82 (3%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P + +D+GSGG + Q + ++L +++ K+A ++ R
Sbjct: 41 LPHLPPNARILDVGSGGALFTKYMADQRPDVHILGLDLSQAQIKRA---GKRMRSYGDRV 97
Query: 126 KVFACRIQEAPQMITTCDVISA 147
+ + T D + +
Sbjct: 98 RFDVGDATKLDFADQTFDGVIS 119
>gi|148242929|ref|YP_001228086.1| methyltransferase_ [Synechococcus sp. RCC307]
gi|147851239|emb|CAK28733.1| Putative methyltransferase, specific to cyanobacteria
[Synechococcus sp. RCC307]
Length = 290
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+D G G G + + QL +E V +++ +F+ + Q+ K+ R +
Sbjct: 142 LDFGGGIGTHALAAA-QLPQVE--QVWMVDLNGHNRAFVEHRAQQLGLGHKLSCLRDLNS 198
Query: 136 PQMITTCDVISARALADLDTLLEYSFP 162
P++ D + LD L + P
Sbjct: 199 PELPQRFDSLVC-----LDVLEHLADP 220
>gi|76808744|ref|YP_333510.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1710b]
gi|76578197|gb|ABA47672.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1710b]
Length = 471
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 312 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 368
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 369 RAPDALAGLRAPDAVFVGGGVSR 391
>gi|110635331|ref|YP_675539.1| 3-demethylubiquinone-9 3-methyltransferase [Mesorhizobium sp. BNC1]
gi|123353220|sp|Q11E01|UBIG_MESSB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|110286315|gb|ABG64374.1| 3-demethylubiquinone-9 3-methyltransferase [Chelativorans sp. BNC1]
Length = 253
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 42/151 (27%), Gaps = 21/151 (13%)
Query: 30 EYFYFLFLKW-SK--------KINLVSSSTVEDFWIRHVE-DSLRVFQLHPYPSIWIDLG 79
E F L +W + K N V + + D H D +D+G
Sbjct: 15 ERFSALAQEWWNPNGKFRPLHKFNPVRLAYIRDNVAAHFGRDPRAAKPF--EGLRILDIG 72
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMI 139
GGG + G V ++ R ++ A +
Sbjct: 73 CGGGLLCEPMARL-----GASVVGADASATNIEVARLHALESGVSIDYRAETAEALADQG 127
Query: 140 TTCDVI----SARALADLDTLLEYSFPWLYQ 166
D+I +AD+D +E L
Sbjct: 128 EKFDIILNMEVVEHVADIDLFIEKCAEMLKP 158
>gi|322695879|gb|EFY87680.1| ubiE/COQ5 methyltransferase, putative [Metarhizium acridum CQMa
102]
Length = 273
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 22/84 (26%), Gaps = 4/84 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+G G G + + + G V +E K R +
Sbjct: 34 LLPHIKPHMTILDIGCGPGTITVDLAGHVPE---GRVIGLERAAKVLEQARALAADKGVE 90
Query: 125 GKVFA-CRIQEAPQMITTCDVISA 147
F T D++
Sbjct: 91 NIEFTEGDANSLSYPDDTFDIVFC 114
>gi|309700412|emb|CBI99701.1| putative methyltransferase [Escherichia coli ETEC H10407]
Length = 256
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|297832188|ref|XP_002883976.1| hypothetical protein ARALYDRAFT_343233 [Arabidopsis lyrata subsp.
lyrata]
gi|297329816|gb|EFH60235.1| hypothetical protein ARALYDRAFT_343233 [Arabidopsis lyrata subsp.
lyrata]
Length = 366
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ I +D+G+G G I S+ + + +E A R +V+
Sbjct: 79 KFLIKDKIVLDVGAGTG----ILSLFCAKAGAAHIYAVECSQM-ADTAREIVKSNGFSDV 133
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E I DVI +
Sbjct: 134 ITVLKGKIEEIELPIPKVDVIIS 156
>gi|296446447|ref|ZP_06888391.1| Ribosomal small subunit Rsm22 [Methylosinus trichosporium OB3b]
gi|296256082|gb|EFH03165.1| Ribosomal small subunit Rsm22 [Methylosinus trichosporium OB3b]
Length = 333
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 17/98 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG+G G + IE L++ +FL + ++ G R
Sbjct: 86 PRRLLDLGAGLGTASLAAREAWPDIEETT--LLDRSR---AFL-DMARRLGESGVGALAR 139
Query: 132 IQEAPQ-----MITTCDVISARALAD--LDTLLEYSFP 162
+ D++ +A L + E + P
Sbjct: 140 ARLVEADLASPPAERFDLV----VASYALTEIAEEALP 173
>gi|312140963|ref|YP_004008299.1| sam dependent methyltransferase [Rhodococcus equi 103S]
gi|325675401|ref|ZP_08155085.1| methyltransferase domain protein [Rhodococcus equi ATCC 33707]
gi|311890302|emb|CBH49620.1| putative SAM dependent methyltransferase [Rhodococcus equi 103S]
gi|325553372|gb|EGD23050.1| methyltransferase domain protein [Rhodococcus equi ATCC 33707]
Length = 267
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DLGS GF + + + G V + + L V + C
Sbjct: 121 GSVLDLGSCFGF--LPLRLARA---GVPVTATDILPGTMTLLDAVAPRLGIPISTLVCDA 175
Query: 133 QEAPQMITTCDVISA 147
P + D ++A
Sbjct: 176 ANVPVPDDSADTVTA 190
>gi|283853343|ref|ZP_06370591.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Desulfovibrio sp. FW1012B]
gi|283571267|gb|EFC19279.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Desulfovibrio sp. FW1012B]
Length = 409
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 17/94 (18%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL P +W D+G+G G + S+ GG V +E + + L ++ T
Sbjct: 242 SLAGLAPRPGDVVW-DIGAGAGSVALEASLLCP---GGPVFAVERDPGRHALLVENIRLT 297
Query: 122 AARGKVFACRIQEAPQMITTCDVISARALADLDT 155
A V A R EAP A+ADL
Sbjct: 298 GA-LTVTAVR-GEAPD-----------AVADLPD 318
>gi|317046810|ref|YP_004114458.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
gi|316948427|gb|ADU67902.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
Length = 343
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + + + L + + + +
Sbjct: 187 LLLSTLTPHTKGKVLDIGCGSGVLATVLAQHSPKVR---LWLCDVHAAAVAASKATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + + D+I +
Sbjct: 244 GLEGEVFASNV--FSDVTGRFDLIIS 267
>gi|229545077|ref|ZP_04433802.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterococcus faecalis TX1322]
gi|307287618|ref|ZP_07567661.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0109]
gi|229309969|gb|EEN75956.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterococcus faecalis TX1322]
gi|306501356|gb|EFM70659.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0109]
gi|315165015|gb|EFU09032.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX1302]
Length = 277
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGVIAISLKLARPNWRV 138
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++L E + + + A + +
Sbjct: 139 IAIDLSEE---ALTVAKQNAKVLGADIEFYHG 167
>gi|229159274|ref|ZP_04287298.1| hypothetical protein bcere0009_870 [Bacillus cereus R309803]
gi|228624166|gb|EEK80968.1| hypothetical protein bcere0009_870 [Bacillus cereus R309803]
Length = 158
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 9 IEAFQMPDIKGDILDVGCGYGPIGLSLA---KEFQGCNVHMVDVNERALG----LAKENA 61
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A ++ RI ++ + I + RA
Sbjct: 62 ANNRIENIRIFQSSVYENVDGKYAAILSNPPIRA 95
>gi|227513056|ref|ZP_03943105.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus buchneri ATCC 11577]
gi|227524271|ref|ZP_03954320.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus hilgardii ATCC 8290]
gi|227083631|gb|EEI18943.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus buchneri ATCC 11577]
gi|227088502|gb|EEI23814.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus hilgardii ATCC 8290]
Length = 288
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+G+G G I + ++ ES K A + Q
Sbjct: 116 YTNRPLKVLDIGTGSGAIAIALKANRPEWQVNASDISESALKVA---QQNAQLHHVAINF 172
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 173 ILSDM--FAHINEAFDLIVS 190
>gi|162453562|ref|YP_001615929.1| putative methyltransferase [Sorangium cellulosum 'So ce 56']
gi|161164144|emb|CAN95449.1| putative methyltransferase [Sorangium cellulosum 'So ce 56']
Length = 253
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G + + EGG V ++ + R + R F R
Sbjct: 21 GMRVLDVGCGRG--DVSLMVARIVGEGGCVLGVDRDPAPIAVARRRAAELGLRCVAFEER 78
Query: 132 -IQEAPQMITTCDVISAR 148
+ D R
Sbjct: 79 DLGALSPAAERFDAAVGR 96
>gi|33592099|ref|NP_879743.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
Tohama I]
gi|39932510|sp|Q7VZG7|UBIG_BORPE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|33571743|emb|CAE41244.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
Tohama I]
gi|332381515|gb|AEE66362.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
CS]
Length = 241
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 52/159 (32%), Gaps = 38/159 (23%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----Y 71
NV + +EK +W E +F H + LR+ +
Sbjct: 11 GVNVDQAEVEKFSALAA---RW---------WDPESEFKPLHAINPLRLGWIQETAGSLS 58
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG ++ + + G ++L E K A ++ + A
Sbjct: 59 GKRVLDMGCGGGILSESMAVAGAQVTG--IDLAEKSLKIARLHGL---ESGVKVDYRAVP 113
Query: 132 IQE-APQMITTCDVISA--------------RALADLDT 155
++E A + DV++ RA A L
Sbjct: 114 VEELAAEQPGQYDVVTCMEMLEHVPDPASVVRACAALAK 152
>gi|15799886|ref|NP_285898.1| hypothetical protein Z0233 [Escherichia coli O157:H7 EDL933]
gi|15829460|ref|NP_308233.1| biotin synthesis protein [Escherichia coli O157:H7 str. Sakai]
gi|168750158|ref|ZP_02775180.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4113]
gi|168758943|ref|ZP_02783950.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4401]
gi|168765060|ref|ZP_02790067.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4501]
gi|168769973|ref|ZP_02794980.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4486]
gi|168776186|ref|ZP_02801193.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4196]
gi|168782935|ref|ZP_02807942.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4076]
gi|168789653|ref|ZP_02814660.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC869]
gi|168800388|ref|ZP_02825395.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC508]
gi|195938582|ref|ZP_03083964.1| putative biotin synthesis protein [Escherichia coli O157:H7 str.
EC4024]
gi|208809410|ref|ZP_03251747.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4206]
gi|208813263|ref|ZP_03254592.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4045]
gi|208819876|ref|ZP_03260196.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4042]
gi|209398090|ref|YP_002268813.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4115]
gi|217326593|ref|ZP_03442677.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
TW14588]
gi|254791337|ref|YP_003076174.1| putative SAM-dependent methyltransferase [Escherichia coli O157:H7
str. TW14359]
gi|261223759|ref|ZP_05938040.1| predicted SAM-dependent methyltransferase [Escherichia coli O157:H7
str. FRIK2000]
gi|261255831|ref|ZP_05948364.1| predicted SAM-dependent methyltransferase [Escherichia coli O157:H7
str. FRIK966]
gi|12512938|gb|AAG54506.1|AE005196_4 unknown [Escherichia coli O157:H7 str. EDL933]
gi|13359662|dbj|BAB33629.1| putative biotin synthesis protein [Escherichia coli O157:H7 str.
Sakai]
gi|187768408|gb|EDU32252.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4196]
gi|188015580|gb|EDU53702.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4113]
gi|188999607|gb|EDU68593.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4076]
gi|189354340|gb|EDU72759.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4401]
gi|189361070|gb|EDU79489.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4486]
gi|189365068|gb|EDU83484.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4501]
gi|189370761|gb|EDU89177.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC869]
gi|189377318|gb|EDU95734.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC508]
gi|208729211|gb|EDZ78812.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4206]
gi|208734540|gb|EDZ83227.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4045]
gi|208739999|gb|EDZ87681.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4042]
gi|209159490|gb|ACI36923.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
EC4115]
gi|209745524|gb|ACI71069.1| putative biotin synthesis protein [Escherichia coli]
gi|209745526|gb|ACI71070.1| putative biotin synthesis protein [Escherichia coli]
gi|209745528|gb|ACI71071.1| putative biotin synthesis protein [Escherichia coli]
gi|209745532|gb|ACI71073.1| putative biotin synthesis protein [Escherichia coli]
gi|217322814|gb|EEC31238.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
TW14588]
gi|254590737|gb|ACT70098.1| predicted SAM-dependent methyltransferase [Escherichia coli O157:H7
str. TW14359]
gi|320190269|gb|EFW64919.1| methyltransferase domain protein [Escherichia coli O157:H7 str.
EC1212]
gi|320638230|gb|EFX07958.1| putative SAM-dependent methyltransferase [Escherichia coli O157:H7
str. G5101]
gi|320643614|gb|EFX12758.1| putative SAM-dependent methyltransferase [Escherichia coli O157:H-
str. 493-89]
gi|320650350|gb|EFX18827.1| putative SAM-dependent methyltransferase [Escherichia coli O157:H-
str. H 2687]
gi|320665444|gb|EFX32506.1| putative SAM-dependent methyltransferase [Escherichia coli O157:H7
str. LSU-61]
gi|326338814|gb|EGD62633.1| methyltransferase, UbiE/COQ5 family [Escherichia coli O157:H7 str.
1044]
gi|326342395|gb|EGD66175.1| putative biotin synthesis protein [Escherichia coli O157:H7 str.
1125]
Length = 256
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVCLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAQMLDVVAQAAEVRQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|300919150|ref|ZP_07135683.1| methyltransferase domain protein [Escherichia coli MS 115-1]
gi|300413748|gb|EFJ97058.1| methyltransferase domain protein [Escherichia coli MS 115-1]
Length = 256
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|258546180|ref|ZP_05706414.1| methyltransferase, S-adenosyl-L-methionine (SAM)-MTase protein
[Cardiobacterium hominis ATCC 15826]
gi|258518605|gb|EEV87464.1| methyltransferase, S-adenosyl-L-methionine (SAM)-MTase protein
[Cardiobacterium hominis ATCC 15826]
Length = 255
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 35/111 (31%), Gaps = 21/111 (18%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D L + P W+D+G G G T++ ++ ++ L Y
Sbjct: 25 FLDWLAL----PPGLRWLDVGCGSG---AFTALLAERAAPTELHGLDCSP---DMLAYAQ 74
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVIS-----------ARALADLDTLLE 158
+ A ++ P D ARA+A++ ++
Sbjct: 75 SRLPAHVQLHTGDATALPFPAACFDAAVMPLVIVFLDDAARAVAEMRRVVR 125
>gi|227523212|ref|ZP_03953261.1| methyltransferase family protein [Lactobacillus hilgardii ATCC
8290]
gi|227089599|gb|EEI24911.1| methyltransferase family protein [Lactobacillus hilgardii ATCC
8290]
Length = 241
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 6/95 (6%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT-SIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ D + + +DLG G G I + + V+L ++ +K + L
Sbjct: 66 IWDKILAKTDISDDATVLDLGCGHGAVLIALSKLLGPFGKAVGVDLWKNADKSHNSLEET 125
Query: 118 -----VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ K A ++ + + P D++++
Sbjct: 126 KRNLEIAKVADHTELVTADMAKLPFEDDRFDLVTS 160
>gi|227495176|ref|ZP_03925492.1| possible 16S rRNA methyltransferase [Actinomyces coleocanis DSM
15436]
gi|226831628|gb|EEH64011.1| possible 16S rRNA methyltransferase [Actinomyces coleocanis DSM
15436]
Length = 218
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 9/88 (10%), Positives = 25/88 (28%), Gaps = 6/88 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ P ++D+G G G + + + ++ + +
Sbjct: 66 LKEVPEPPASGRFLDVGCGWGVISTLLGKFSPDAK---IWAVDVNGRALDLTKRNANANG 122
Query: 123 ARGKVF---ACRIQEAPQMITTCDVISA 147
+++A D+I +
Sbjct: 123 CTNVETYYAHEALEKARAEGLQFDLIWS 150
>gi|218783032|ref|YP_002434350.1| modification methylase, HemK family [Desulfatibacillum alkenivorans
AK-01]
gi|218764416|gb|ACL06882.1| modification methylase, HemK family [Desulfatibacillum alkenivorans
AK-01]
Length = 289
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V P +DLG+G G + + + V + + + QK
Sbjct: 110 LEVLNAAQAPMRVLDLGTGSGAIILALASEKPEHHYMAV---DYSPQALETAKANAQKHN 166
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ EA + + D++ +
Sbjct: 167 LNVDFYKGSWFEAVRCLDRFDLVVS 191
>gi|169611002|ref|XP_001798919.1| hypothetical protein SNOG_08610 [Phaeosphaeria nodorum SN15]
gi|111062658|gb|EAT83778.1| hypothetical protein SNOG_08610 [Phaeosphaeria nodorum SN15]
Length = 437
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
HV D + P ++ +D+G G G I + + + + +L+E+
Sbjct: 225 HVVDGGYPWHELPEGTLVVDVGGGPGHVAIALARKYPQLLFEVQDLVETVE 275
>gi|78776399|ref|YP_392714.1| methylase involved in ubiquinone/menaquinone biosynthesis-like
[Sulfurimonas denitrificans DSM 1251]
gi|78496939|gb|ABB43479.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
protein [Sulfurimonas denitrificans DSM 1251]
Length = 251
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D G G G I + V I+ ++ SF + Q+ +
Sbjct: 45 ENVLDAGCGFGQWSIPLA-----KHNTNVYSIDISKERVSFTEELAQELNIKN 92
>gi|83590268|ref|YP_430277.1| O-methyltransferase family protein [Moorella thermoacetica ATCC
39073]
gi|83573182|gb|ABC19734.1| O-methyltransferase, family 2 [Moorella thermoacetica ATCC 39073]
Length = 360
Score = 34.7 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ ++ +DLG G GF I ++ + + K + R +++
Sbjct: 163 SIVAWEGFRGARTLLDLGGGHGFYAIALCQVNPNLRAVVFD----KPHIIACTREFIRQY 218
Query: 122 AARGKVFACRIQE-APQMITTCDVI 145
+V + + D++
Sbjct: 219 GLEDRVIVQGGDACSEEWGGGYDIV 243
>gi|317494118|ref|ZP_07952534.1| methyltransferase domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316917891|gb|EFV39234.1| methyltransferase domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 273
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 14/92 (15%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARGK 126
+D+G G G + + +L + G + +++ K+A ++
Sbjct: 57 FSNAKTLLDVGCGPGSVCLNVADKLEHVYGIDYSKGMLDVAEKRARAMQ-------LENV 109
Query: 127 VFACRI-QEAPQMITTCDVISARALADLDTLL 157
R +E+ + CD+ A+A TL+
Sbjct: 110 TLTRRAWEESWDDLPQCDI----AVASRSTLV 137
>gi|300856011|ref|YP_003780995.1| cyclopropane-fatty-acyl-phospholipid synthase [Clostridium
ljungdahlii DSM 13528]
gi|300436126|gb|ADK15893.1| cyclopropane-fatty-acyl-phospholipid synthase [Clostridium
ljungdahlii DSM 13528]
Length = 394
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 17/106 (16%)
Query: 55 WIRHVEDSLRVFQL-----------HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ +H DSL QL +D+G G G I+ + + ++ + L
Sbjct: 139 YFKHENDSLYQAQLNKVDHILKKLNLKEGQTLLDIGCGWG-ELILMAAKKYGVKAVGITL 197
Query: 104 IESKNKKASFLRYVVQKTAARGKVFA--CRIQEAPQMITTCDVISA 147
+ + KKA+ +++ +GKV +E D I +
Sbjct: 198 SKEQLKKAN---ERIEENNLQGKVEVKLADYRELADKKQKFDRIVS 240
>gi|259501367|ref|ZP_05744269.1| methyltransferase domain protein [Lactobacillus iners DSM 13335]
gi|302190912|ref|ZP_07267166.1| Methyltransferase small [Lactobacillus iners AB-1]
gi|259167220|gb|EEW51715.1| methyltransferase domain protein [Lactobacillus iners DSM 13335]
Length = 204
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 LKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSHVTMIDVNERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F+ + +I
Sbjct: 111 ---DNVNIFSSECYRSLDEQEQFGLI 133
>gi|237744500|ref|ZP_04574981.1| precorrin-8W decarboxylase [Fusobacterium sp. 7_1]
gi|229431729|gb|EEO41941.1| precorrin-8W decarboxylase [Fusobacterium sp. 7_1]
Length = 189
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P SI ID+G+G G GI + + G V IE + K ++ +K
Sbjct: 23 ISIAKLMLKPNSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIKLNAEKF 79
Query: 122 AARG-KVFACRIQEA 135
++ + +A
Sbjct: 80 NLDNFELIHGKAPDA 94
>gi|237740134|ref|ZP_04570615.1| precorrin-8W decarboxylase [Fusobacterium sp. 2_1_31]
gi|294782777|ref|ZP_06748103.1| precorrin-8W decarboxylase [Fusobacterium sp. 1_1_41FAA]
gi|229422151|gb|EEO37198.1| precorrin-8W decarboxylase [Fusobacterium sp. 2_1_31]
gi|294481418|gb|EFG29193.1| precorrin-8W decarboxylase [Fusobacterium sp. 1_1_41FAA]
Length = 189
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P SI ID+G+G G GI + + G V IE + K ++ +K
Sbjct: 23 ISIAKLMLKPNSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIKLNAEKF 79
Query: 122 AARG-KVFACRIQEA 135
++ + +A
Sbjct: 80 NLDNFELIHGKAPDA 94
>gi|221060080|ref|XP_002260685.1| protein-L-isoaspartate O-methyltransferase beta-aspartate
methyltransferase [Plasmodium knowlesi strain H]
gi|193810759|emb|CAQ42657.1| protein-L-isoaspartate O-methyltransferase beta-aspartate
methyltransferase, putative [Plasmodium knowlesi strain
H]
Length = 224
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
Query: 62 SLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLS--SIEGGLVNLIESKNKKASFLRYVV 118
SL+ + + S ID+GSG G+ + +++ + V +E A+F +
Sbjct: 67 SLKRLMDVLKPGSRAIDVGSGSGYITVCMAMRTKVLENKDSFVIGLERVKDVANFSIENI 126
Query: 119 -----QKTAARG-KVFACRI----QEAPQMITTCDVI 145
+ K+ I ++ + + D I
Sbjct: 127 RRDKPELLHLDNFKIIHKNIYQVSEQEKEQLGLFDAI 163
>gi|163854801|ref|YP_001629098.1| putative methyltransferase [Bordetella petrii DSM 12804]
gi|163258529|emb|CAP40828.1| putative methyltransferase [Bordetella petrii]
Length = 256
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 31/121 (25%), Gaps = 22/121 (18%)
Query: 46 VSSSTVEDFWIRHV------------------EDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
+ + + R D L + +DLG GGG
Sbjct: 2 TAPVSHDQAVDRQFGPRAAAYLTSAVHAQGADLDQLAELAREHPGTRVLDLGCGGGHVSF 61
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + +L +S + ++ + + P D++
Sbjct: 62 HVAPCAARV--VAYDLSQSMLDVVA--EQAARRGLDNLSTRQGKAERLPFADGEFDLVLC 117
Query: 148 R 148
R
Sbjct: 118 R 118
>gi|150403509|ref|YP_001330803.1| type 11 methyltransferase [Methanococcus maripaludis C7]
gi|150034539|gb|ABR66652.1| Methyltransferase type 11 [Methanococcus maripaludis C7]
Length = 218
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 6/79 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VFA 129
+D+GSG G SI L+ + ++ ++ + +
Sbjct: 43 NGTCVDIGSGPG----ALSIALAKQTDLSIIALDFSKHMNEIASKNIEDANLNDRIQIVQ 98
Query: 130 CRIQEAPQMITTCDVISAR 148
+ P D+I +R
Sbjct: 99 GDVHNIPIDNDYADLIVSR 117
>gi|19704299|ref|NP_603861.1| precorrin-8W decarboxylase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296327296|ref|ZP_06869848.1| precorrin-8W decarboxylase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19714539|gb|AAL95160.1| Precorrin-8W decarboxylase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296155546|gb|EFG96311.1| precorrin-8W decarboxylase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 189
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P SI ID+G+G G GI + + G V IE + K ++ +K
Sbjct: 23 ISIAKLMLKPNSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIKLNAEKF 79
Query: 122 AARG-KVFACRIQEA 135
++ + +A
Sbjct: 80 NLDNFELIHGKAPDA 94
>gi|21228561|ref|NP_634483.1| methyltransferase [Methanosarcina mazei Go1]
gi|20907052|gb|AAM32155.1| methyltransferase [Methanosarcina mazei Go1]
Length = 287
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 11/85 (12%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P S +D+G G G + S + + ++ K+ L+ V++ + V
Sbjct: 68 FDPEGSRVLDIGCGPGTLSLPLSKLGAEVTALDISS--GMLKR---LKDTVKEESLPVDV 122
Query: 128 F-----ACRIQEAPQMITTCDVISA 147
I ++ D++ A
Sbjct: 123 IETSWWTADI-DSLGFRDRFDLVIA 146
>gi|238790071|ref|ZP_04633849.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
frederiksenii ATCC 33641]
gi|238721884|gb|EEQ13546.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
frederiksenii ATCC 33641]
Length = 347
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVEDS----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R DS L P+ +D+G G G + + QL I+ L
Sbjct: 169 VKTLPGVFSRDSLDSGSHLLLSTFSEPFKGSVLDVGCGAGVLASVLAQQLPKIKWT---L 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + +V A + + ++I +
Sbjct: 226 SDVSAAAIESSRATLAANNIEAQVIASNV--YSDIKGRFEMIIS 267
>gi|297618327|ref|YP_003703486.1| methyltransferase type 11 [Syntrophothermus lipocalidus DSM 12680]
gi|297146164|gb|ADI02921.1| Methyltransferase type 11 [Syntrophothermus lipocalidus DSM 12680]
Length = 269
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +DLGSGGG + + G V ++ ++ ++
Sbjct: 69 LLADLKEGEVVLDLGSGGGLD--VLAASKYVGPSGTVYGLDMTDEMLDLANRNKEQMGVT 126
Query: 125 GKVF-ACRIQEAPQMITTCDVISA 147
F I++ P +CDV+ +
Sbjct: 127 NVEFLKGFIEDIPLPDESCDVVMS 150
>gi|283785499|ref|YP_003365364.1| protein methyltransferase hemk (protein-glutamine N
methyltransferase) [Citrobacter rodentium ICC168]
gi|282948953|emb|CBG88556.1| protein methyltransferase hemk (protein-glutamine N
methyltransferase) [Citrobacter rodentium ICC168]
Length = 278
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L P +DLG+G G + + + ++ ++ + + A
Sbjct: 102 ALARLPASPCRILDLGTGTGAIALALATERPDC---VITAVDRMPDAVALAQRNAAHLAI 158
Query: 124 -RGKVFACRIQEAPQMITTCDVISA 147
++ A + D+I +
Sbjct: 159 GNVRILQSDWFSAVKG-EQFDMIVS 182
>gi|227533723|ref|ZP_03963772.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227188707|gb|EEI68774.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 198
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 32/113 (28%), Gaps = 14/113 (12%)
Query: 47 SSSTVEDFWIRHVED--S----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
++ + +H D S + +D+G+G G G+ + + +
Sbjct: 28 RFTSDNGVFSKHTVDFGSRVLIATILADELPAGPILDVGTGYGPIGLALAKRFPDRQ--- 84
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
V + + + + + Q+ VI RA
Sbjct: 85 VTMSDVNERALALAQRNATDNDISNVTIVESSM-YDQIDGQFGVIVTNPPIRA 136
>gi|226193159|ref|ZP_03788769.1| putative methyltransferase [Burkholderia pseudomallei Pakistan 9]
gi|225934759|gb|EEH30736.1| putative methyltransferase [Burkholderia pseudomallei Pakistan 9]
Length = 291
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 13/100 (13%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G G G ++ G ++ + R ++
Sbjct: 41 LVEAARTGRRVLDVGCGAG--ATTLAVAQRLGARGRCVGVDVSRPLIAAARARAERGGVP 98
Query: 125 GKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q + + D I +R A A+L
Sbjct: 99 ASFVHADAQTHAFVPASFDTIISRFGVMFFENAVDAFANL 138
>gi|116747900|ref|YP_844587.1| type 12 methyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116696964|gb|ABK16152.1| Methyltransferase type 12 [Syntrophobacter fumaroxidans MPOB]
Length = 244
Score = 34.7 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 17/127 (13%)
Query: 25 TLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLHPYP----SIWIDL 78
L E + + V + FW + V DS L + L P +++
Sbjct: 33 QLTDFEAYIERLVDSGG----VGIMDLP-FWAK-VWDSSFLLAWFLGKQPVVPGRRLLEI 86
Query: 79 GSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM 138
G+G G G+ ++ G V L + F R + P
Sbjct: 87 GAGMGVVGLYAALC-----GHRVTLSDINEDALLFARANARLNGLTEMKILKLDWNDPSP 141
Query: 139 ITTCDVI 145
D++
Sbjct: 142 FEPYDIV 148
>gi|323219316|gb|EGA03805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
Length = 199
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|315634703|ref|ZP_07889987.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
segnis ATCC 33393]
gi|315476651|gb|EFU67399.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
segnis ATCC 33393]
Length = 334
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D+G G G G S + + + + +++
Sbjct: 186 LLLSTLKNVSGDVLDIGCGAGVIG---SYIQKHHPKTKLVMTDIHAMALESAQRTLRENQ 242
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+G V A + + D+I +
Sbjct: 243 LQGTVLASDV--FSHVEGKFDLIIS 265
>gi|268325893|emb|CBH39481.1| hypothetical protein, SAM dependent methyltransferases family
[uncultured archaeon]
Length = 194
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G G G +I L+ + GG V I+ +++ + + +V + +
Sbjct: 31 SILDIGCGTG----KLAIHLNEVTGGKVTAIDPVHERIVTAKQKAHTSEVAFEVQS--AE 84
Query: 134 EAPQMITTCDVISA 147
+ T D++ +
Sbjct: 85 KLNFADETFDIVVS 98
>gi|255030523|ref|ZP_05302474.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
LO28]
Length = 161
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 13/95 (13%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+G+G G G+ + I V IE ++ K
Sbjct: 5 KKLLDVGAGTGSVGLQVACNFPKIH---VTAIERNPDAVDLIKQNQAKFGLENIAVIEAY 61
Query: 133 QEAP-QMITTCDVISARAL-----ADLDTLLEYSF 161
T D I +L ++++S
Sbjct: 62 APIELPEKETFDAI----FIGGSGGNLTDIIDWSL 92
>gi|251793049|ref|YP_003007775.1| 16S ribosomal RNA m2G1207 methyltransferase [Aggregatibacter
aphrophilus NJ8700]
gi|247534442|gb|ACS97688.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
aphrophilus NJ8700]
Length = 334
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D+G G G G S + + + + +++
Sbjct: 186 LLLSTLKNVSGDVLDIGCGAGVIG---SYIQKHHPKTKLVMTDIHAMALESAQRTLRENQ 242
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+G V A + + D+I +
Sbjct: 243 LQGTVLASDV--FSHVEGKFDLIIS 265
>gi|217069886|gb|ACJ83303.1| unknown [Medicago truncatula]
Length = 281
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ + +D+G+G G I S+ + V +E + A + +V+
Sbjct: 95 RFLFKNKVVLDVGAGTG----ILSLFCAKAGAAHVYAVECSHM-ADRAKEIVETNGYSKV 149
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
V +I+E + D+I +
Sbjct: 150 ITVLKGKIEELELPVPKVDIIIS 172
>gi|213648796|ref|ZP_03378849.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
Length = 179
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 63 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 119
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 120 RNVRILQSCWFSALSGQQFDMIVS 143
>gi|167892145|ref|ZP_02479547.1| hypothetical protein Bpse7_00180 [Burkholderia pseudomallei 7894]
Length = 291
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 13/100 (13%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G G G ++ G ++ + R ++
Sbjct: 41 LVEAARTGRRVLDVGCGAG--ATTLAVAQRLGARGRCVGVDVSRPLIAAARARAERGGVP 98
Query: 125 GKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q + + D I +R A A+L
Sbjct: 99 ASFVHADAQTHAFVPASFDTIISRFGVMFFENAVDAFANL 138
>gi|126180215|ref|YP_001048180.1| methyltransferase type 12 [Methanoculleus marisnigri JR1]
gi|125863009|gb|ABN58198.1| Methyltransferase type 12 [Methanoculleus marisnigri JR1]
Length = 279
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 10/92 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-VVQKT 121
L + + P +D+G+G G + + V ++ S LR + +
Sbjct: 54 LAILDIRPED-TVLDMGAGTGRLAVPIA-----RTAAHVTALDPSEGMLSVLRERMAAEE 107
Query: 122 AARGKVFACRIQE--APQMITTCDVISARALA 151
R ++ + + DV+ A A +
Sbjct: 108 LTNYSTVTMRWEDTVIGRDVEPHDVVVA-AFS 138
>gi|110636627|ref|YP_676834.1| protoporphyrinogen oxidase [Cytophaga hutchinsonii ATCC 33406]
gi|110279308|gb|ABG57494.1| possible protoporphyrinogen oxidase [Cytophaga hutchinsonii ATCC
33406]
Length = 287
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + + ID+G+G G I + I+G V ++ ++ V ++ A
Sbjct: 109 LIITENNSAAPQIIDIGTGTGCIAISLA---KKIKGARVTAVDI----STEALAVAEENA 161
Query: 123 ARGKVFACRIQ-----EAPQMITTCDVISA 147
+ +V ++ + + ++ D+I +
Sbjct: 162 LKNEVSVSFLEMNFLTQHSSIQSSFDIIVS 191
>gi|15224820|ref|NP_179557.1| PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A); protein-arginine
N-methyltransferase [Arabidopsis thaliana]
gi|75100557|sp|O82210|ANM12_ARATH RecName: Full=Probable protein arginine N-methyltransferase 1.2;
Short=AtPRMT12
gi|3687250|gb|AAC62148.1| putative arginine N-methyltransferase [Arabidopsis thaliana]
gi|30102762|gb|AAP21299.1| At2g19670 [Arabidopsis thaliana]
gi|110743120|dbj|BAE99452.1| putative arginine N-methyltransferase [Arabidopsis thaliana]
gi|330251816|gb|AEC06910.1| protein arginine N-methyltransferase 1 [Arabidopsis thaliana]
Length = 366
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG- 125
+ I +D+G+G G I S+ + V +E A + +V+
Sbjct: 79 KFLIKDKIVLDVGAGTG----ILSLFCAKAGAAHVYAVECSQM-ADTAKEIVKSNGFSDV 133
Query: 126 -KVFACRIQEAPQMITTCDVISA 147
V +I+E + DVI +
Sbjct: 134 ITVLKGKIEEIELPVPKVDVIIS 156
>gi|329954889|ref|ZP_08295906.1| methyltransferase domain protein [Bacteroides clarus YIT 12056]
gi|328526993|gb|EGF54004.1| methyltransferase domain protein [Bacteroides clarus YIT 12056]
Length = 236
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT- 121
L + +D+G+G G + + + + +E A+ + +Q +
Sbjct: 29 LGAWAPVQDAKRILDVGAGSGLISLQLAQRNPE---AAITSVEIDPAAAAQAQENIQSSP 85
Query: 122 -AARGKVFACRIQEAPQMITTCDVISA 147
+ R +V C D+I +
Sbjct: 86 WSHRMEVVCCDF-RKYHPEDRFDLIVS 111
>gi|304382913|ref|ZP_07365395.1| metallothionein SmtA [Prevotella marshii DSM 16973]
gi|304335938|gb|EFM02186.1| metallothionein SmtA [Prevotella marshii DSM 16973]
Length = 232
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 29/120 (24%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + + +D+G+G G ++ + + + +V I+ + R +
Sbjct: 25 DGVLLGAWAEGGMRILDIGTGTGLIALMMAQRF---QQAMVTGIDID---TAACRQAWE- 77
Query: 121 TAARGKVFACRIQ------EAPQMITTCDVISA---------------RALADLDTLLEY 159
+ FA R++ ++ D I + RA+A L Y
Sbjct: 78 -NVKASPFADRVEIQETSVQSYMPSEAFDAIVSNPPFFVNSLRNPDKQRAVARHTDTLSY 136
>gi|300869152|ref|ZP_07113749.1| methyltransferase type 11 [Oscillatoria sp. PCC 6506]
gi|300332851|emb|CBN58947.1| methyltransferase type 11 [Oscillatoria sp. PCC 6506]
Length = 440
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D G G G+ +I + + ++L E + R +Q F
Sbjct: 57 EGKVILDAGCGSGYKSLILAEANPGAKIVGIDLSEES---VNLARQRLQYHGFENIDFQA 113
Query: 131 -RIQEAPQMITTCDVI 145
I+E P + D I
Sbjct: 114 LSIEELPSLNQQFDYI 129
>gi|224143306|ref|XP_002324910.1| predicted protein [Populus trichocarpa]
gi|222866344|gb|EEF03475.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 5/89 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ DS+ +++G G G + + V +E + L V
Sbjct: 70 ILDSIVRKSSINPTDTVLEIGPGTG--NLTLKLL---DVASKVVAVEIDKRMVGVLNKRV 124
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
++ K+ R D++ A
Sbjct: 125 KEHGFEDKLSVIREDALKAEFPKFDLVVA 153
>gi|213617487|ref|ZP_03372313.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
Length = 262
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L +DLG+G G + + + E V ++ + + A
Sbjct: 102 ALARLPVKTCRILDLGTGTGAIALALACERPDCE---VTAVDRMPDAVALAIRNAEHLAI 158
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
R + D+I +
Sbjct: 159 RNVRILQSCWFSALSGQQFDMIVS 182
>gi|220934880|ref|YP_002513779.1| methyltransferase type 11 [Thioalkalivibrio sp. HL-EbGR7]
gi|219996190|gb|ACL72792.1| methyltransferase type 11 [Thioalkalivibrio sp. HL-EbGR7]
Length = 262
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P + +DLGSG G I ++ +++ E++ +KA + + +
Sbjct: 75 LADIRP-GDVVLDLGSGSGMDTFIAALKVGPRGRVLGLDMTEAQREKA---KRLAKAAGI 130
Query: 124 RGKVFACR-IQEAPQMITTCDVISA-----------RALADLDTLLE 158
F I++ P + DVI + R A LL+
Sbjct: 131 DNVSFHEGYIEDPPFDEDSVDVIISNGVINLSAEKGRVFAAAARLLK 177
>gi|145594413|ref|YP_001158710.1| Fmu (Sun) domain-containing protein [Salinispora tropica CNB-440]
gi|145303750|gb|ABP54332.1| Fmu (Sun) domain protein [Salinispora tropica CNB-440]
Length = 509
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V D+L V L W+DL +G G + + G + +E +A +
Sbjct: 302 VADALTVAPLDGPDGRWLDLCAGPGGKSGLLGAVAAQ-RGARLTAVEVSEHRARLVGQAT 360
Query: 119 QKTAARGKVFACR-IQEAPQMITT-CDVISARAL 150
+ R + E P++ D RAL
Sbjct: 361 RDLPVTVLNTDGRTVGETPKLAEGHFD----RAL 390
>gi|86747206|ref|YP_483702.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
palustris HaA2]
gi|109895913|sp|Q2J419|UBIG_RHOP2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|86570234|gb|ABD04791.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
palustris HaA2]
Length = 253
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 24/86 (27%), Gaps = 10/86 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +D+G G G + G V I+ + + K+
Sbjct: 65 SLSCLS----GLRMLDIGCGAGLLCEPFTRL-----GAQVIGIDPSATNIAAAKIHADKS 115
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
++E D++ A
Sbjct: 116 HLPIDYRCTTVEEI-DPRERFDIVLA 140
>gi|16332013|ref|NP_442741.1| Mg-protoporphyrin IX methyl transferase [Synechocystis sp. PCC
6803]
gi|15213945|sp|Q55467|CHLM_SYNY3 RecName: Full=Magnesium-protoporphyrin O-methyltransferase;
AltName: Full=Magnesium-protoporphyrin IX
methyltransferase
gi|1001325|dbj|BAA10812.1| Mg-protoporphyrin IX methyl transferase [Synechocystis sp. PCC
6803]
Length = 230
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 13/103 (12%)
Query: 60 EDSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DS+ + + + D G G G I + G LV + K +
Sbjct: 48 VDSVVAWLVADGNLPGLLVCDAGCGVGSLSIPLAQA-----GALVYGSDISEKMVGEAQQ 102
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
Q+ A G Q+ Q+ D + LD L+ Y
Sbjct: 103 KAQEVLAYGNQPTFMTQDLAQLGGKYDTVIC-----LDVLIHY 140
>gi|1161275|gb|AAA85380.1| Mg-protoporphyrin IX methyl transferase [Synechocystis sp. PCC
6803]
Length = 230
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 13/103 (12%)
Query: 60 EDSLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
DS+ + + + D G G G I + G LV + K +
Sbjct: 48 VDSVVAWLVADGNLPGLLVCDAGCGVGSLSIPLAQA-----GALVYGSDISEKMVGEAQQ 102
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
Q+ A G Q+ Q+ D + LD L+ Y
Sbjct: 103 KAQEVLAYGNQPTFMTQDLAQLGGKYDTVIC-----LDVLIHY 140
>gi|260060773|ref|YP_003193853.1| putative RNA methyltransferase [Robiginitalea biformata HTCC2501]
gi|88784903|gb|EAR16072.1| putative RNA methyltransferase [Robiginitalea biformata HTCC2501]
Length = 237
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 61 DSLRV---FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+ + L P +D+GSG G G++ + + S + V ++ +
Sbjct: 24 DSVLLGAWAPLPESPGQLLDVGSGNGLLGLMLAQRCPSGDIEAVE-VDPGAYVCCVENFE 82
Query: 118 VQKTAARGKVFACRIQE-APQMITTCDVISA 147
A R + C +E + D+I +
Sbjct: 83 ASPWADRLFCYHCSWEEFVAESAGPYDMIIS 113
>gi|330502569|ref|YP_004379438.1| soluble pyridine nucleotide transhydrogenase [Pseudomonas mendocina
NK-01]
gi|328916855|gb|AEB57686.1| soluble pyridine nucleotide transhydrogenase [Pseudomonas mendocina
NK-01]
Length = 464
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 51 VEDFWIRH--VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
D RH + DS + L P I G G G + S + G LV+LI++++
Sbjct: 152 PADVDFRHPRIYDSDTILSLGHTPRRLIIY--GAGVIGCEYASIFSGL-GVLVDLIDNRD 208
Query: 109 KKASFLR-YVVQKT--AARGKVFACRIQEAPQMIT 140
+ SFL + R R E + I
Sbjct: 209 QLLSFLDSEISDALSYHLRNNNVLIRHNEEYERIE 243
>gi|315148531|gb|EFT92547.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX4244]
Length = 277
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++L E + + Q A + +
Sbjct: 139 IAIDLSEE---ALTVAKQNAQVLGADIEFYHG 167
>gi|260554586|ref|ZP_05826807.1| protein-(glutamine-N5) methyltransferase, release factor-specific
protein [Acinetobacter baumannii ATCC 19606]
gi|260411128|gb|EEX04425.1| protein-(glutamine-N5) methyltransferase, release factor-specific
protein [Acinetobacter baumannii ATCC 19606]
Length = 273
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + V + + Q F
Sbjct: 104 LPKNANIVDLGTGTGAIALALASERPDW---FVTATDIYAPTLDVAKENAQTHGLHHVKF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
AC D+I +
Sbjct: 161 ACGAWFEALEPQQFDLIVS 179
>gi|296109428|ref|YP_003616377.1| methylase [Methanocaldococcus infernus ME]
gi|295434242|gb|ADG13413.1| methylase [Methanocaldococcus infernus ME]
Length = 191
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 54 FWIRHVE----DSLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ + V DS + + +D+G+G G I +I + ++GG+V I+
Sbjct: 4 IYDKDVYEPAEDSYLLLKNIVDVKGKRVLDVGTGTG----ILAIASA-LKGGIVEGIDIN 58
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
K + + + K + + + DVI
Sbjct: 59 PKAIELAKKNAKLNGVKVKFYLSNL--FENVKGKYDVI 94
>gi|226493374|ref|NP_001149819.1| LOC100283446 [Zea mays]
gi|195634865|gb|ACG36901.1| protein arginine N-methyltransferase 1 [Zea mays]
gi|219886547|gb|ACL53648.1| unknown [Zea mays]
Length = 384
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 15/86 (17%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-- 125
+ +D+G+G G I S+ + V IE S + + Q+
Sbjct: 98 FLIKNKVVLDVGAGTG----ILSLFCAKAGAKHVYAIE-----CSQMADMAQEIVKSNGY 148
Query: 126 ----KVFACRIQEAPQMITTCDVISA 147
V +++E + DVI +
Sbjct: 149 SDVITVIKGKVEEIELPVPKVDVIIS 174
>gi|146306634|ref|YP_001187099.1| soluble pyridine nucleotide transhydrogenase [Pseudomonas mendocina
ymp]
gi|166223482|sp|A4XSQ1|STHA_PSEMY RecName: Full=Soluble pyridine nucleotide transhydrogenase;
Short=STH; AltName: Full=NAD(P)(+) transhydrogenase
[B-specific]
gi|145574835|gb|ABP84367.1| pyridine nucleotide-disulfide oxidoreductase dimerization region
[Pseudomonas mendocina ymp]
Length = 464
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 51 VEDFWIRH--VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
D RH + DS + L P I G G G + S + G LV+LI++++
Sbjct: 152 PADVDFRHPRIYDSDTILSLGHTPRRLIIY--GAGVIGCEYASIFSGL-GVLVDLIDNRD 208
Query: 109 KKASFLR-YVVQKT--AARGKVFACRIQEAPQMIT 140
+ SFL + R R E + I
Sbjct: 209 QLLSFLDSEISDALSYHLRNNNVLIRHNEEYERIE 243
>gi|158320270|ref|YP_001512777.1| ribosomal protein L11 methyltransferase [Alkaliphilus oremlandii
OhILAs]
gi|166989893|sp|A8MG53|PRMA_ALKOO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|158140469|gb|ABW18781.1| ribosomal protein L11 methyltransferase [Alkaliphilus oremlandii
OhILAs]
Length = 313
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 27/84 (32%), Gaps = 4/84 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ + + D+G+G G I +I + + ++ + V+
Sbjct: 167 QLEKYISKDTTVFDIGTGSG----ILAIVGAKLGAKKAIGVDFDPVAVTVANENVRANKV 222
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
V + + DV+ A
Sbjct: 223 ENIVEIKQGNLMDVVSEKADVVVA 246
>gi|50955207|ref|YP_062495.1| hypothetical protein Lxx15950 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951689|gb|AAT89390.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 203
Score = 34.7 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P ++DLG G G + +++ V ++ + +R +K +
Sbjct: 55 VPPAPPSGQFLDLGCGWGPLALTLALESPH---ATVWAVDVNTRALDVVRRNAEKLGLKN 111
Query: 126 K 126
Sbjct: 112 V 112
>gi|164428112|ref|XP_956875.2| hypothetical protein NCU01669 [Neurospora crassa OR74A]
gi|157072017|gb|EAA27639.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 587
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 7/78 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-- 129
+ +D+G G G I S+ + V ++ R + +
Sbjct: 277 GKVVLDIGCGTG----ILSMFCAKAGAKQVIAVDRSE-IIDKARENIYANGLSDVIVTLK 331
Query: 130 CRIQEAPQMITTCDVISA 147
RI+E + D+I +
Sbjct: 332 GRIEEVILPVEKVDIIVS 349
>gi|115374327|ref|ZP_01461611.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|115368637|gb|EAU67588.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
DW4/3-1]
Length = 247
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G+G G + +I + G V ++ + +
Sbjct: 116 GASVLDVGTGTG----VLAIAAKKLGAGRVVGTDNDPTSVELAHENAAVNDTPDVELSGK 171
Query: 132 IQEAPQMITTCDVISARALAD-LDTLLEYSFPWLYQK 167
Q+ T D++ A LA+ L L P + ++
Sbjct: 172 G--LEQVPGTFDLVVANILANTLIALAPLIAPKVKER 206
>gi|41614961|ref|NP_963459.1| hypothetical protein NEQ165 [Nanoarchaeum equitans Kin4-M]
gi|40068685|gb|AAR39020.1| NEQ165 [Nanoarchaeum equitans Kin4-M]
Length = 208
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P DLGSG G G+ ++ V LIE ++ L +
Sbjct: 49 IAWAIPIGDEIADLGSGNGILGLALALVG----WNKVYLIEKDPEQEEILYKNKELLGLN 104
Query: 125 GKVF 128
Sbjct: 105 NVEI 108
>gi|53717673|ref|YP_106659.1| hypothetical protein BPSL0034 [Burkholderia pseudomallei K96243]
gi|67641564|ref|ZP_00440340.1| methyltransferase [Burkholderia mallei GB8 horse 4]
gi|76809002|ref|YP_331665.1| aklanonic acid methyl transferase [Burkholderia pseudomallei 1710b]
gi|121600421|ref|YP_994550.1| hypothetical protein BMASAVP1_A3270 [Burkholderia mallei SAVP1]
gi|124385491|ref|YP_001027834.1| hypothetical protein BMA10229_A1857 [Burkholderia mallei NCTC
10229]
gi|126440316|ref|YP_001057091.1| putative methyltransferase [Burkholderia pseudomallei 668]
gi|126449786|ref|YP_001082218.1| hypothetical protein BMA10247_2695 [Burkholderia mallei NCTC 10247]
gi|167001623|ref|ZP_02267417.1| putative methyltransferase [Burkholderia mallei PRL-20]
gi|167916916|ref|ZP_02504007.1| hypothetical protein BpseBC_00110 [Burkholderia pseudomallei
BCC215]
gi|254175159|ref|ZP_04881820.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254186564|ref|ZP_04893081.1| putative methyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|254194587|ref|ZP_04901018.1| putative methyltransferase [Burkholderia pseudomallei S13]
gi|254201280|ref|ZP_04907644.1| putative methyltransferase [Burkholderia mallei FMH]
gi|254206621|ref|ZP_04912972.1| putative methyltransferase [Burkholderia mallei JHU]
gi|254259730|ref|ZP_04950784.1| putative methyltransferase [Burkholderia pseudomallei 1710a]
gi|254298633|ref|ZP_04966084.1| putative methyltransferase [Burkholderia pseudomallei 406e]
gi|254357354|ref|ZP_04973628.1| putative methyltransferase [Burkholderia mallei 2002721280]
gi|52208087|emb|CAH34017.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|76578455|gb|ABA47930.1| similar to aklanonic acid methyl transferase [Burkholderia
pseudomallei 1710b]
gi|121229231|gb|ABM51749.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124293511|gb|ABN02780.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|126219809|gb|ABN83315.1| putative methyltransferase [Burkholderia pseudomallei 668]
gi|126242656|gb|ABO05749.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|147747174|gb|EDK54250.1| putative methyltransferase [Burkholderia mallei FMH]
gi|147752163|gb|EDK59229.1| putative methyltransferase [Burkholderia mallei JHU]
gi|148026418|gb|EDK84503.1| putative methyltransferase [Burkholderia mallei 2002721280]
gi|157808650|gb|EDO85820.1| putative methyltransferase [Burkholderia pseudomallei 406e]
gi|157934249|gb|EDO89919.1| putative methyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|160696204|gb|EDP86174.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|169651337|gb|EDS84030.1| putative methyltransferase [Burkholderia pseudomallei S13]
gi|238522517|gb|EEP85961.1| methyltransferase [Burkholderia mallei GB8 horse 4]
gi|243062633|gb|EES44819.1| putative methyltransferase [Burkholderia mallei PRL-20]
gi|254218419|gb|EET07803.1| putative methyltransferase [Burkholderia pseudomallei 1710a]
Length = 291
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 13/100 (13%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G G G ++ G ++ + R ++
Sbjct: 41 LVEAARTGRRVLDVGCGAG--ATTLAVAQRLGARGRCVGVDVSRPLIAAARARAERGGVP 98
Query: 125 GKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q + + D I +R A A+L
Sbjct: 99 ASFVHADAQTHAFVPASFDTIISRFGVMFFENAVDAFANL 138
>gi|323181910|gb|EFZ67322.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
1357]
Length = 333
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 177 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 233
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 234 CVEGEVFASNV--FSEVKGRFDMIIS 257
>gi|331651115|ref|ZP_08352140.1| putative biotin synthesis protein [Escherichia coli M718]
gi|331050856|gb|EGI22908.1| putative biotin synthesis protein [Escherichia coli M718]
Length = 256
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVCLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAQMLDVVAQAAEVRQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|300819824|ref|ZP_07100010.1| methyltransferase domain protein [Escherichia coli MS 107-1]
gi|300527582|gb|EFK48644.1| methyltransferase domain protein [Escherichia coli MS 107-1]
Length = 256
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|317153067|ref|YP_004121115.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Desulfovibrio aespoeensis Aspo-2]
gi|316943318|gb|ADU62369.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Desulfovibrio aespoeensis Aspo-2]
Length = 284
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 15/99 (15%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
HV +++ P + DLG+G G + + G V+L
Sbjct: 97 TEHVIEAVLNAFSPDTPVRFADLGTGSGILAVTLAHCFPHATGLAVDLSGP--------A 148
Query: 116 YVVQKTAARGKVFACRIQEAPQM-------ITTCDVISA 147
V + AR RI D+I +
Sbjct: 149 LAVARRNARAHGVHDRIAFVQGDFTGPILGKGRFDLIVS 187
>gi|229586971|ref|YP_002845472.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia africae
ESF-5]
gi|228022021|gb|ACP53729.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia africae
ESF-5]
Length = 289
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + +G V I++ ++ + I+E
Sbjct: 105 ILDVGCGGGLIATPLA-----AQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEE 159
Query: 135 APQMITTCDVISA 147
DV+
Sbjct: 160 LESDKL-YDVVIC 171
>gi|126740405|ref|ZP_01756093.1| hypothetical protein RSK20926_16402 [Roseobacter sp. SK209-2-6]
gi|126718541|gb|EBA15255.1| hypothetical protein RSK20926_16402 [Roseobacter sp. SK209-2-6]
Length = 349
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 33/104 (31%), Gaps = 9/104 (8%)
Query: 52 EDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT-SIQLSSIEGGLVNLIESK--- 107
++ R + + +DLG G G ++ V++ E++
Sbjct: 44 DEVLTR-YYGCGLIAPEALEGANILDLGCGAGRDVYALSAMVGPEGRVVGVDMTEAQLEV 102
Query: 108 -NKKASFLRYVVQKTAARGKVFACRIQEAPQM---ITTCDVISA 147
+ + ++ + I++ + + D+I +
Sbjct: 103 ARRHQDYHAEAFGYDSSNVEFHHGYIEKLEDLGLEPGSFDIIVS 146
>gi|83589437|ref|YP_429446.1| 50S ribosomal protein L11P methyltransferase [Moorella
thermoacetica ATCC 39073]
gi|123524952|sp|Q2RKY6|PRMA_MOOTA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|83572351|gb|ABC18903.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Moorella
thermoacetica ATCC 39073]
Length = 318
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
SL+ + + + +D+G G G I ++ + + G V ++ + R + +
Sbjct: 164 SLQALERVLKPGARVVDVGCGTG----ILALAAAKMGAGAVLALDLDPVAVAVARKNIAR 219
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
A KV + D++ A
Sbjct: 220 NGAADKVTVRNNDLLAGLEGPFDLVVA 246
>gi|16080753|ref|NP_391581.1| glutamine methylase [Bacillus subtilis subsp. subtilis str. 168]
gi|221311661|ref|ZP_03593508.1| hypothetical protein Bsubs1_20001 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315989|ref|ZP_03597794.1| hypothetical protein BsubsN3_19922 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320900|ref|ZP_03602194.1| hypothetical protein BsubsJ_19865 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325184|ref|ZP_03606478.1| hypothetical protein BsubsS_20026 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321313250|ref|YP_004205537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Bacillus subtilis BSn5]
gi|1170229|sp|P45873|HEMK_BACSU RecName: Full=Protein methyltransferase hemK homolog
gi|853777|emb|CAA89885.1| ywkE [Bacillus subtilis subsp. subtilis str. 168]
gi|2636225|emb|CAB15717.1| glutamine methylase of release factor 1 (and perhaps others) at a
GGQ site [Bacillus subtilis subsp. subtilis str. 168]
gi|291486284|dbj|BAI87359.1| hypothetical protein BSNT_05651 [Bacillus subtilis subsp. natto
BEST195]
gi|320019524|gb|ADV94510.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Bacillus subtilis BSn5]
Length = 288
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 36/104 (34%), Gaps = 5/104 (4%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ H+ + R +D+G+G G + ++ + V+ +
Sbjct: 90 LIPRPETEEVVF-HLLEKYRSVFSEDGKLEVVDVGTGSGAIAVTLAL---ENQSFSVSAV 145
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACR-IQEAPQMITTCDVISA 147
+ + +K A + + ++ + D+I +
Sbjct: 146 DISKEALQVASANAEKLGANVRFYQGDLLEPFIKAGKKADIIVS 189
>gi|254240607|ref|ZP_04933929.1| hypothetical protein PA2G_01266 [Pseudomonas aeruginosa 2192]
gi|126193985|gb|EAZ58048.1| hypothetical protein PA2G_01266 [Pseudomonas aeruginosa 2192]
Length = 316
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ L V A G + R
Sbjct: 138 RRAADIGCGAGPGAIRIAMACPDAE---VHGLDINPAALD-LARVNAALAGVGNLTLARS 193
Query: 133 QEAPQMITTCDVISA 147
Q+ D+I A
Sbjct: 194 DLLSQVPGRFDLIVA 208
>gi|66820068|ref|XP_643680.1| hypothetical protein DDB_G0275359 [Dictyostelium discoideum AX4]
gi|60471790|gb|EAL69745.1| hypothetical protein DDB_G0275359 [Dictyostelium discoideum AX4]
Length = 462
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 6/100 (6%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+ + ++ +E S+ S+ +D+G G G P + G + +
Sbjct: 217 TEPLETAVKRLEHSVADSARITKDSLVLDVGCGVGGPTLEI----CQYTGCKIRGLNINK 272
Query: 109 KKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVIS 146
K+ + + + P T DV++
Sbjct: 273 KQVGIATQRAKDLGVSDRASFDHGDAMKMPYPDNTFDVVT 312
>gi|330801738|ref|XP_003288881.1| hypothetical protein DICPUDRAFT_79655 [Dictyostelium purpureum]
gi|325081074|gb|EGC34604.1| hypothetical protein DICPUDRAFT_79655 [Dictyostelium purpureum]
Length = 463
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 10/94 (10%)
Query: 55 WIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
V DS R+ + S+ +D+G G G P + G + + K+
Sbjct: 227 LEHQVADSARITK----DSLVLDVGCGVGGPTLEI----CQYTGCRIRGLNINKKQVGIA 278
Query: 115 RYVVQKTAA--RGKVFACRIQEAPQMITTCDVIS 146
+ R + P T D ++
Sbjct: 279 TQRAKDLGVADRASFDHGDAMKMPYPDNTFDAVT 312
>gi|331666196|ref|ZP_08367077.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli TA271]
gi|331066407|gb|EGI38284.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli TA271]
Length = 343
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 CVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|299132848|ref|ZP_07026043.1| ubiquinone biosynthesis O-methyltransferase [Afipia sp. 1NLS2]
gi|298592985|gb|EFI53185.1| ubiquinone biosynthesis O-methyltransferase [Afipia sp. 1NLS2]
Length = 250
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 6/74 (8%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G G G + G V I+ S + ++ ++
Sbjct: 71 RILDIGCGAGLLCEPLARL-----GAQVVGIDPSETNISVAKLHAERGHLSVDYRCTTVE 125
Query: 134 EAPQMITTCDVISA 147
+ + D++ A
Sbjct: 126 QI-DLRERFDIVLA 138
>gi|282164849|ref|YP_003357234.1| hypothetical protein MCP_2179 [Methanocella paludicola SANAE]
gi|282157163|dbj|BAI62251.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 192
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
Query: 72 PSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++D+G G G+ + + I G V I+ + L + A
Sbjct: 31 GMTFVDIGCGQGYFALPAARIVGPK---GRVYGIDIDEEALGVLGRKAADLGLMIETIAG 87
Query: 131 RIQEAPQMITTCDVI 145
+ DV+
Sbjct: 88 EGENMVACEGCADVV 102
>gi|260493945|ref|ZP_05814076.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Fusobacterium sp. 3_1_33]
gi|260198091|gb|EEW95607.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Fusobacterium sp. 3_1_33]
Length = 189
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ L P SI ID+G+G G GI + + G V IE + K ++ +K
Sbjct: 24 SIAKLMLKP-NSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIKLNAEKF 79
Query: 122 AARG-KVFACRIQEAPQMITTCD 143
++ + +A I + D
Sbjct: 80 NLDNFELIHGKAPDAIPDI-SYD 101
>gi|256961204|ref|ZP_05565375.1| modification methylase HemK [Enterococcus faecalis Merz96]
gi|293384153|ref|ZP_06630047.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
R712]
gi|293386967|ref|ZP_06631536.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
S613]
gi|312907896|ref|ZP_07766879.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
DAPTO 512]
gi|312978575|ref|ZP_07790313.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecalis DAPTO 516]
gi|256951700|gb|EEU68332.1| modification methylase HemK [Enterococcus faecalis Merz96]
gi|291078633|gb|EFE15997.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
R712]
gi|291083637|gb|EFE20600.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
S613]
gi|310625987|gb|EFQ09270.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
DAPTO 512]
gi|311288724|gb|EFQ67280.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecalis DAPTO 516]
Length = 277
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++L E + + Q A + +
Sbjct: 139 IAIDLSEE---ALTVAKQNAQVLGADIEFYHG 167
>gi|167763197|ref|ZP_02435324.1| hypothetical protein BACSTE_01567 [Bacteroides stercoris ATCC
43183]
gi|167698491|gb|EDS15070.1| hypothetical protein BACSTE_01567 [Bacteroides stercoris ATCC
43183]
Length = 258
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H + F S +++G G G + + G V I+ + R
Sbjct: 22 HFLPYIHRFTSVTPQSRILEIGCGEGGNLVPFARI-----GCRVTGIDLSENRIRQARQF 76
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVI 145
Q+ A I + Q+ D+I
Sbjct: 77 FQEERLPATFIASDIFQIIQLEEAFDII 104
>gi|120434996|ref|YP_860682.1| modification methylase HemK [Gramella forsetii KT0803]
gi|117577146|emb|CAL65615.1| modification methylase HemK [Gramella forsetii KT0803]
Length = 282
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 15/83 (18%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN------LIESKNKKASFLRYVVQKTAAR 124
+D+G+G G I + +L + + LI +N K + + +K
Sbjct: 114 QELKILDIGTGSGCIPISLAKELEDAKVSSFDISSEALLIAKRNAKLNAADVLFRKLNIL 173
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
EA ++ D+I +
Sbjct: 174 ---------EAEELEGQFDIIVS 187
>gi|74314805|ref|YP_313224.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella sonnei Ss046]
gi|260871094|ref|YP_003237496.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O111:H- str.
11128]
gi|123615410|sp|Q3YU23|RSMC_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|73858282|gb|AAZ90989.1| putative enzyme [Shigella sonnei Ss046]
gi|257767450|dbj|BAI38945.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O111:H- str.
11128]
gi|320175421|gb|EFW50523.1| Ribosomal RNA small subunit methyltransferase C [Shigella
dysenteriae CDC 74-1112]
gi|320183349|gb|EFW58203.1| Ribosomal RNA small subunit methyltransferase C [Shigella flexneri
CDC 796-83]
gi|323166178|gb|EFZ51956.1| ribosomal RNA small subunit methyltransferase C [Shigella sonnei
53G]
gi|323176273|gb|EFZ61865.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
1180]
Length = 343
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 CVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|157156493|ref|YP_001465889.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
E24377A]
gi|157163818|ref|YP_001461136.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli HS]
gi|209921836|ref|YP_002295920.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli SE11]
gi|218556905|ref|YP_002389819.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli IAI1]
gi|256020001|ref|ZP_05433866.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella sp. D9]
gi|300815995|ref|ZP_07096218.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
gi|300824407|ref|ZP_07104520.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
gi|307313695|ref|ZP_07593314.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
gi|309795645|ref|ZP_07690061.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
gi|331680480|ref|ZP_08381139.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli H591]
gi|332281147|ref|ZP_08393560.1| ribosomal RNA small subunit methyltransferase C [Shigella sp. D9]
gi|226712937|sp|A7ZVR0|RSMC_ECO24 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712943|sp|B7LXT2|RSMC_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712945|sp|A8A899|RSMC_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|226712949|sp|B6I2Q2|RSMC_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|157069498|gb|ABV08753.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
HS]
gi|157078523|gb|ABV18231.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
E24377A]
gi|209915095|dbj|BAG80169.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
SE11]
gi|218363674|emb|CAR01333.1| 16S RNA m2G1207 methylase [Escherichia coli IAI1]
gi|300523049|gb|EFK44118.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
gi|300531202|gb|EFK52264.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
gi|306906518|gb|EFN37031.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
gi|308120769|gb|EFO58031.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
gi|315063673|gb|ADT78000.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli W]
gi|320200514|gb|EFW75100.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
EC4100B]
gi|323380246|gb|ADX52514.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli KO11]
gi|323945890|gb|EGB41935.1| methyltransferase small domain-containing protein [Escherichia coli
H120]
gi|324016914|gb|EGB86133.1| methyltransferase small domain [Escherichia coli MS 117-3]
gi|324118324|gb|EGC12218.1| methyltransferase small domain-containing protein [Escherichia coli
E1167]
gi|331071943|gb|EGI43279.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
m2G1207methyltransferase) [Escherichia coli H591]
gi|332103499|gb|EGJ06845.1| ribosomal RNA small subunit methyltransferase C [Shigella sp. D9]
Length = 343
Score = 34.7 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 CVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|319406074|emb|CBI79704.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. AR 15-3]
Length = 247
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 13/110 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL F+ +D+G GGG + G V +++ + ++
Sbjct: 59 SLTPFE----GLRILDIGCGGGLLCEPMARL-----GATVIGVDAAQMNIEVAKIHAIQS 109
Query: 122 AARGKVFACRIQEAPQMITTCDVI----SARALADLDTLLEYSFPWLYQK 167
+ DVI +A++D +E + + +
Sbjct: 110 GLSIDYRTATAEVLVNKGEQFDVILNMEVVEHVANVDLFIEATAKMIKPQ 159
>gi|310818989|ref|YP_003951347.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|309392061|gb|ADO69520.1| Ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
DW4/3-1]
Length = 288
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G+G G + +I + G V ++ + +
Sbjct: 157 GASVLDVGTGTG----VLAIAAKKLGAGRVVGTDNDPTSVELAHENAAVNDTPDVELSGK 212
Query: 132 IQEAPQMITTCDVISARALAD-LDTLLEYSFPWLYQK 167
Q+ T D++ A LA+ L L P + ++
Sbjct: 213 G--LEQVPGTFDLVVANILANTLIALAPLIAPKVKER 247
>gi|307249500|ref|ZP_07531488.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858493|gb|EFM90561.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 234
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + + V I+ +
Sbjct: 30 HLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMARARA-----TVTGIDMTTEPLE 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
R ++ I++ Q DVI+
Sbjct: 85 VARKHAEENGLSIDYRQTTIEDFVQNQTACHAEKFDVITC 124
>gi|288554406|ref|YP_003426341.1| modification methylase, HemK family protein [Bacillus pseudofirmus
OF4]
gi|288545566|gb|ADC49449.1| modification methylase, HemK family protein [Bacillus pseudofirmus
OF4]
Length = 293
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 48 SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ I HV L+ +D+G+G G G+ +++ + ++ V ++
Sbjct: 99 PRPETEELIEHVLH-LKQSLWGDASVDVLDVGAGSGAIGVTLALECAEMK---VEAVDIS 154
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAP-QMITTCDVISA 147
+ R + A+ F + P QM D+I +
Sbjct: 155 KEALEIARLNAETLDAKMSFFESDLLSTPIQMEKRFDIIVS 195
>gi|240256174|ref|NP_680769.4| unknown protein [Arabidopsis thaliana]
gi|332661199|gb|AEE86599.1| S-adenosyl-L-methionine-dependent methyltransferase
domain-containing protein [Arabidopsis thaliana]
Length = 304
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-------TAAR 124
I+LGSG G G++ + E V + + + ++++ ++ T+ +
Sbjct: 128 GKRVIELGSGYGLAGLVIAAA---TEASEVVISDGNPQVVNYIKRNIETNSMAFGGTSVK 184
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ ++ T D+I A
Sbjct: 185 AMELHWNQHQLSELTNTFDIIVA 207
>gi|227496263|ref|ZP_03926559.1| type 11 methyltransferase [Actinomyces urogenitalis DSM 15434]
gi|226834188|gb|EEH66571.1| type 11 methyltransferase [Actinomyces urogenitalis DSM 15434]
Length = 305
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 13/100 (13%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
E W D LR +D+G+G G + + G V ++ +
Sbjct: 62 PEQMW----AD-LRADAGARLEGSVLDVGAGTGKASLTLARA-----GAQVTALDPSAEM 111
Query: 111 ASFL--RYVVQKTAARGKVFACRIQEA-PQMITTCDVISA 147
+ L R ++ AAR ++ ++ PQ D++ +
Sbjct: 112 LAVLGQRAAQERLAARVRLRQGSFEDLDPQTEEKIDLLVS 151
>gi|295696019|ref|YP_003589257.1| Methyltransferase type 12 [Bacillus tusciae DSM 2912]
gi|295411621|gb|ADG06113.1| Methyltransferase type 12 [Bacillus tusciae DSM 2912]
Length = 190
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSI--EGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+D+G+G G + + + E G V +E + +FLR +Q +
Sbjct: 37 GMRVMDIGTGPG----VFTRMYAEAVGEMGRVYALEKSPQAMAFLRRELQDLK-NVEYVL 91
Query: 130 CRIQEAPQMITTCDVI 145
++ + DV+
Sbjct: 92 ADAEQGFGEVPKVDVV 107
>gi|239501458|ref|ZP_04660768.1| methyl transferase [Acinetobacter baumannii AB900]
Length = 273
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + V + + Q F
Sbjct: 104 LPKNANIVDLGTGTGAIALALASERPDW---FVTATDIYAPTLDVAKENAQTHGLHHVKF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
AC D+I +
Sbjct: 161 ACGAWFEALEPQQFDLIVS 179
>gi|154488912|ref|ZP_02029761.1| hypothetical protein BIFADO_02221 [Bifidobacterium adolescentis
L2-32]
gi|154083049|gb|EDN82094.1| hypothetical protein BIFADO_02221 [Bifidobacterium adolescentis
L2-32]
Length = 214
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR P ++DLG G G + + + +++ E +A L +
Sbjct: 63 LRQAPEPPEEGTFLDLGCGWGPIALTLGFESPKADIWALDVNE----RALELTRRNAELN 118
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
G + A ++ P ++ T D+I +
Sbjct: 119 GMGNIHAVTAEQVPAVL-TFDLIWS 142
>gi|153006765|ref|YP_001381090.1| type 11 methyltransferase [Anaeromyxobacter sp. Fw109-5]
gi|152030338|gb|ABS28106.1| Methyltransferase type 11 [Anaeromyxobacter sp. Fw109-5]
Length = 228
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 17/98 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P ++LG+G G + G V IE LR + V
Sbjct: 58 PRTIVELGAGAG------ANFRYLARGTHVIAIEPNRHMHGHLRAAAARHGVTVDVRTAV 111
Query: 132 IQEAPQMITTCDVISA-----------RALADLDTLLE 158
+ P + D + + RALA++ +L
Sbjct: 112 AERLPLPDASVDAVISSLVLCSVADPGRALAEVRRVLR 149
>gi|152986068|ref|YP_001347390.1| hypothetical protein PSPA7_2014 [Pseudomonas aeruginosa PA7]
gi|150961226|gb|ABR83251.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 253
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +DLG G G + ++ G +V S A + Q+ A + R
Sbjct: 43 EARVLDLGCGAGHVSFQVA----ALAGEVVAYDLSAEMLAVVAQSAAQRGMANIRTERGR 98
Query: 132 IQEAPQMITTCDVISAR 148
+ P D + +R
Sbjct: 99 AESLPFADGDFDFVFSR 115
>gi|82546721|ref|YP_410668.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella boydii Sb227]
gi|123557836|sp|Q31SW8|RSMC_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|81248132|gb|ABB68840.1| putative enzyme [Shigella boydii Sb227]
gi|332090318|gb|EGI95416.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii
3594-74]
Length = 343
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + I + L + R +
Sbjct: 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIR---LTLCDVSAPAVEASRATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G+VFA + ++ D+I +
Sbjct: 244 CVEGEVFASNV--FSEVKGRFDMIIS 267
>gi|332360649|gb|EGJ38458.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
SK49]
Length = 276
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 25/85 (29%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G+G G + + + + + S Q +
Sbjct: 101 LILSENPETSLSVLDIGTGSGAIALALANSRPDWQ---ITASDLSGDALSLATENAQSSG 157
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+A Q D+I +
Sbjct: 158 LNLVFVQSDCLDAIQR--KFDIIVS 180
>gi|315032690|gb|EFT44622.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0017]
gi|315143715|gb|EFT87731.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX2141]
Length = 277
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 18/95 (18%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE---SKNKKASFLRYVVQKTAARGKVFAC 130
++L E + KK + Q A + +
Sbjct: 139 IAIDLSEEALTVAKKNA------QVLGADIEFYHG 167
>gi|312136879|ref|YP_004004216.1| RNA methylase [Methanothermus fervidus DSM 2088]
gi|311224598|gb|ADP77454.1| putative RNA methylase [Methanothermus fervidus DSM 2088]
Length = 366
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
IE K + +V+ K+F + + + DVI
Sbjct: 247 IEKFKKHVEGCKKIVKNLGLDIKIFQGEAERMHEYVENVDVIV 289
>gi|282903129|ref|ZP_06311020.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus C160]
gi|282596084|gb|EFC01045.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus C160]
Length = 202
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
F+ HP D+G G G G++ + + +++ ++ + + +
Sbjct: 53 FKAHPPGPSKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVEKNKKLNGI 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ + + D I
Sbjct: 110 DNVIVKESDALSAVEDKSFDFI 131
>gi|269926537|ref|YP_003323160.1| modification methylase, HemK family [Thermobaculum terrenum ATCC
BAA-798]
gi|269790197|gb|ACZ42338.1| modification methylase, HemK family [Thermobaculum terrenum ATCC
BAA-798]
Length = 283
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+L ++ D+G+G G I +I+ ++ V + + R VQK + +
Sbjct: 107 KLATKGAVVADVGTGSGAIAISIAIERPDVK---VVATDISHDALDVARRNVQKHGVQDR 163
Query: 127 VFACRIQEAPQMITTCDVISA 147
VF + + D++ A
Sbjct: 164 VFLLQGNLLDPVHEMVDMVVA 184
>gi|20091365|ref|NP_617440.1| methyltransferase [Methanosarcina acetivorans C2A]
gi|19916499|gb|AAM05920.1| methyltransferase [Methanosarcina acetivorans C2A]
Length = 244
Score = 34.7 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+++ + +D+G G G + + +G V I+ + +K
Sbjct: 30 IYEYIKKDHLILDIGCGVGKVSLQLAF-----QGFYVEGIDINETGILAAQDSARKLNLA 84
Query: 125 GKVF--ACRIQEAPQMITTCDVIS 146
K ++ P M D++
Sbjct: 85 DKAHFRVGDAKDLPYMDDKFDIVI 108
>gi|330981968|gb|EGH80071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 189
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI + E V L + +++ +
Sbjct: 8 WLADEPARILDLCTGSGCIGIACAEVFPDAE---VALADLSYDALEVANQNIERHGMEDR 64
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 65 VYTVQGDGFDGLPGQRFDLIVS 86
>gi|220934774|ref|YP_002513673.1| ubiquinone biosynthesis O-methyltransferase [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996084|gb|ACL72686.1| ubiquinone biosynthesis O-methyltransferase [Thioalkalivibrio sp.
HL-EbGR7]
Length = 251
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 9/100 (9%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + + G V +N + L Q R + +
Sbjct: 68 EGLKVLDIGCGGGILSESMARLGADVHGIDVT---PRNIAVASLHAQGQDLPLRYETVS- 123
Query: 131 RIQEAPQMITTCDVI----SARALADLDTLLEYSFPWLYQ 166
+E + D++ +ADL + +
Sbjct: 124 -AEELAERGEQYDLVLNMEVVEHVADLPGFMAACNRLVRP 162
>gi|148272649|ref|YP_001222210.1| putative methylase [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|147830579|emb|CAN01514.1| putative methylase [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
Length = 267
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Query: 61 DSLRVFQLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+S + H P + +D+GSG G + + ++ +++ E ++AS L
Sbjct: 25 NSAAYLEPHLRPGLDVLDVGSGPGTITVELADLVAPGRVVGLDMSEDVVRQASEL--ATS 82
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA-----------RALADL 153
+ A + + E P DV+ A RALA++
Sbjct: 83 RGTANVEFVTGSVYELPYPDAAFDVVHAHQVLQHVGDPVRALAEM 127
>gi|221134589|ref|ZP_03560894.1| ubiquinone biosynthesis O-methyltransferase [Glaciecola sp.
HTCC2999]
Length = 244
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 7/81 (8%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G GGG + G V I+ + + R +T + +
Sbjct: 57 ILNGLKIVDIGCGGGILAEALA-----SHGAHVVGIDLAEESLTVARLHALETGLKNVTY 111
Query: 129 --ACRIQEAPQMITTCDVISA 147
C + A Q + DV++
Sbjct: 112 ELICAEEFASQNMEQFDVVTC 132
>gi|327458943|gb|EGF05291.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK1057]
Length = 189
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 12/109 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +LH +D+GSG G I + +E V +E + + +Q
Sbjct: 22 SLDKLELH-RAKRMLDVGSGTGSVTIQAARTYPELE---VVAVERNEDAVALTQENIQHF 77
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL----ADLDTLLEYSFPWLYQ 166
+ ++ + D I + ++ + ++ +
Sbjct: 78 GCHNVRLHQGLAPI-ELEGSFDAIF---VGGTGGNMQEIFDWCAQLMEP 122
>gi|257785067|ref|YP_003180284.1| Methyltransferase type 11 [Atopobium parvulum DSM 20469]
gi|257473574|gb|ACV51693.1| Methyltransferase type 11 [Atopobium parvulum DSM 20469]
Length = 263
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 29/104 (27%), Gaps = 9/104 (8%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ R + + + + P +D+G G G I + + +V I+ K
Sbjct: 74 DGKRQMSRQIIEGIASYITIPAGGRGLDVGCGSGALAIAVAKKNPD---AMVVGIDRWGK 130
Query: 110 ------KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
K ++ F + D + +
Sbjct: 131 EYASFSKTLCENNAKAESVTNTSFFPGDAVNLNFEDESFDAVFS 174
>gi|225076469|ref|ZP_03719668.1| hypothetical protein NEIFLAOT_01515 [Neisseria flavescens
NRL30031/H210]
gi|224952148|gb|EEG33357.1| hypothetical protein NEIFLAOT_01515 [Neisseria flavescens
NRL30031/H210]
Length = 371
Score = 34.7 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D + L P D+G+G G + + L+ + ++ K + ++
Sbjct: 181 LDLIAQVPLAPNIQTAFDIGTGSG----VIAAILAKRGIPDIIATDTNPKAIACATANLE 236
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ V I P+ + D+I
Sbjct: 237 RLGLNKAVNIQSIDLFPE--SCADLIVC 262
>gi|239943269|ref|ZP_04695206.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998]
gi|239989727|ref|ZP_04710391.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
Length = 260
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D L S +++G G G + + G + +E+ + A+ R +
Sbjct: 25 LYDDLADLAGAVPGSRVLEIGCGTGQATVPLA-----GRGCRITAVEAGPRMAATARRNL 79
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
++ A +V + P DV+ A
Sbjct: 80 AESPA-AEVVTAEFESWPLPAEPFDVVLA 107
>gi|225571896|ref|ZP_03780766.1| hypothetical protein CLOHYLEM_07870 [Clostridium hylemonae DSM
15053]
gi|225159449|gb|EEG72068.1| hypothetical protein CLOHYLEM_07870 [Clostridium hylemonae DSM
15053]
Length = 118
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 7/93 (7%)
Query: 56 IRHVEDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
H+++ + P+ + +DLG+G G+ + + +I ++++E + F
Sbjct: 31 EHHLKN---ILDFLPFSADMKILDLGTGSGYLSFPIAKKYPNISIIGLDIVEKALEVNRF 87
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
++ P D++
Sbjct: 88 --KANEENVQNISFITYDGVNFPFADNEFDMVI 118
>gi|210623863|ref|ZP_03294098.1| hypothetical protein CLOHIR_02049 [Clostridium hiranonis DSM 13275]
gi|210153289|gb|EEA84295.1| hypothetical protein CLOHIR_02049 [Clostridium hiranonis DSM 13275]
Length = 320
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ + + D+G G G I +I + + V ++ + V+++
Sbjct: 175 QLEKYVTPDAKVFDIGCGSG----ILAIAAAKLGANDVTAVDLDEVAVEVAKENVKESNV 230
Query: 124 --RGKVFACRIQEAPQMITTCDVISA 147
+ V + + DV+ A
Sbjct: 231 EDKVTVLHGNLTDVIH--DKADVVVA 254
>gi|188533296|ref|YP_001907093.1| Probable adenine-specific methylase [Erwinia tasmaniensis Et1/99]
gi|188028338|emb|CAO96199.1| Probable adenine-specific methylase [Erwinia tasmaniensis Et1/99]
Length = 292
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + RH + P +D+ +G G I + E V+ +
Sbjct: 93 LVPRSPIGELIDRHFA---GIINHQPQ--HILDMCTGSGCIAIACAWAFPQAE---VDAV 144
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQM-ITTCDVIS 146
+ + + + V R ++ T D+I
Sbjct: 145 DISDDALAVTEQNISAHGLEQHVTPIRSDLFRELPKTQYDLIV 187
>gi|172035610|ref|YP_001802111.1| hypothetical protein cce_0694 [Cyanothece sp. ATCC 51142]
gi|171697064|gb|ACB50045.1| unknown [Cyanothece sp. ATCC 51142]
Length = 359
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 25/91 (27%), Gaps = 10/91 (10%)
Query: 64 RVFQLHP-------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
+ L P +D+G G G + + V+ E+ + R
Sbjct: 160 AILPLVPGLTAKLSDGIKVLDVGCGSGRAISKLAQLYPRSQFIGVDFSET---AIALARS 216
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
Q F + D+I+A
Sbjct: 217 QAQGLGLNNLKFEVQDAANLNFEQPFDLITA 247
>gi|110804257|ref|YP_687777.1| putative biotin synthesis protein [Shigella flexneri 5 str. 8401]
gi|110613805|gb|ABF02472.1| putative biotin synthesis protein [Shigella flexneri 5 str. 8401]
gi|333010750|gb|EGK30176.1| ubiE/COQ5 methyltransferase family protein [Shigella flexneri
K-272]
gi|333021249|gb|EGK40502.1| ubiE/COQ5 methyltransferase family protein [Shigella flexneri
K-227]
Length = 256
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|323474149|gb|ADX84755.1| Methyltransferase type 11 [Sulfolobus islandicus REY15A]
Length = 189
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 16/120 (13%)
Query: 30 EYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIIT 89
+ + + + +LVS R + +DLG G GF I
Sbjct: 9 DRYINPLVLDNPLRSLVSP--PNRILSR-------FMKYLKEDYTVVDLGCGPGFFTTIL 59
Query: 90 SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMITT-CDVISA 147
+ + V ++ + L+ VQK + + + Q+ + D + +
Sbjct: 60 ARIVK-----TVYAVDPDERAIRRLKEKVQKLSLNNVIPYVAPAQKLEFIKDKSIDFVFS 114
>gi|315648267|ref|ZP_07901368.1| Methyltransferase type 12 [Paenibacillus vortex V453]
gi|315276913|gb|EFU40256.1| Methyltransferase type 12 [Paenibacillus vortex V453]
Length = 235
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V D L + +DLGSG G I + Q GG V ++ LR
Sbjct: 38 VMDHLELLPF--QNMRVLDLGSGVGRNSIPIA-QRIQPSGGKVLCVDLLPSAVDKLRQYA 94
Query: 119 QKTAA--RGKVFACRIQEAPQMITTCDVISA 147
+ A +Q T I A
Sbjct: 95 ASYGVSSSIEALAADVQHYDIAKDTYHYIIA 125
>gi|262066930|ref|ZP_06026542.1| precorrin-8W decarboxylase [Fusobacterium periodonticum ATCC 33693]
gi|291379343|gb|EFE86861.1| precorrin-8W decarboxylase [Fusobacterium periodonticum ATCC 33693]
Length = 189
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ L P SI ID+G+G G GI + + G V IE + K ++ +K
Sbjct: 24 SIAKLMLKP-NSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIKLNAEKF 79
Query: 122 AARG-KVFACRIQEA 135
++ + +A
Sbjct: 80 NLDNFELIHGKAPDA 94
>gi|261868483|ref|YP_003256405.1| 16S ribosomal RNA m2G1207 methyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|293390498|ref|ZP_06634832.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|261413815|gb|ACX83186.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290951032|gb|EFE01151.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 334
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + L +D+G G G G + + + + + + +Q+
Sbjct: 186 LLLSTLKNIAGEVLDVGCGAGVIGSYIQRHNPNTR---LIMTDIHALALASAKRTLQENR 242
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+G V A + + D+I +
Sbjct: 243 LQGTVVASDV--FSHVDGKFDLIIS 265
>gi|237812246|ref|YP_002896697.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei MSHR346]
gi|237503856|gb|ACQ96174.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei MSHR346]
Length = 408
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLRAPDAVFVGGGVSR 328
>gi|300361859|ref|ZP_07058036.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
JV-V03]
gi|300354478|gb|EFJ70349.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
JV-V03]
Length = 315
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G I +I S + V + ++ + + +
Sbjct: 169 LAMERALVKPMSVLDVGTGSG----ILAIAASKLGASQVLGTDISDEAVTAAKENIALNN 224
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D+I A LA D LLE
Sbjct: 225 IDNIDVR-KANLLKDIDEKYDLIVANILA--DILLEL 258
>gi|225870518|ref|YP_002746465.1| methyltransferase [Streptococcus equi subsp. equi 4047]
gi|225699922|emb|CAW93853.1| putative methyltransferase [Streptococcus equi subsp. equi 4047]
Length = 282
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 12/144 (8%)
Query: 4 CDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSL 63
+ ++L +L + +VS + + YF L L ++ L+ E+ L
Sbjct: 49 SEDQALLERIFLALSQHVSPQYITGRAYFRDLVLAVDSRV-LIPRPETEELVE------L 101
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I + + S +
Sbjct: 102 ILKENDATRKSVLDIGTGSGAIAIALKKARPNWQVTA-----SDISADALSLAYSNALDH 156
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ + ++ D+I +
Sbjct: 157 HVEIAFEQSDLFSKLSGQFDIIVS 180
>gi|254515446|ref|ZP_05127507.1| methyltransferase type 12 [gamma proteobacterium NOR5-3]
gi|219677689|gb|EED34054.1| methyltransferase type 12 [gamma proteobacterium NOR5-3]
Length = 397
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 24/82 (29%), Gaps = 4/82 (4%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
++ P +D+GS G + + E V++ + + +
Sbjct: 197 YEAGFKPKRILDIGSTVGHNIVPVAQAFPDTEIIAVDVAAPVLR---YAHARAKSLGVTN 253
Query: 126 KVFA-CRIQEAPQMITTCDVIS 146
F + + D+I
Sbjct: 254 IQFHQANAESLDFEDGSFDLII 275
>gi|254361815|ref|ZP_04977950.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
haemolytica PHL213]
gi|261491598|ref|ZP_05988181.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|261494958|ref|ZP_05991427.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|153093350|gb|EDN74346.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
haemolytica PHL213]
gi|261309367|gb|EEY10601.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261312724|gb|EEY13844.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
haemolytica serotype A2 str. BOVINE]
Length = 237
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + +G +V I+ ++
Sbjct: 30 HLLNPLRLAYILEKSNGLFGKKVLDVGCGGGILSEAMA-----KQGAIVTGIDMTSQPLE 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQM-----ITTCDVISA 147
+ +++ I+ DVI+
Sbjct: 85 VAKQHAKESGLEIDYQQTTIENFLAKMTACNQEKFDVITC 124
>gi|254303221|ref|ZP_04970579.1| possible precorrin-6B methyltransferase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148323413|gb|EDK88663.1| possible precorrin-6B methyltransferase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 189
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ L P SI ID+G+G G GI + + G V IE + K ++ +K
Sbjct: 24 SIAKLMLKP-NSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIKLNAEKF 79
Query: 122 AARG-KVFACRIQEA 135
++ + +A
Sbjct: 80 NLDNFELIHGKAPDA 94
>gi|111224305|ref|YP_715099.1| precorrin-6Y C(5,15)-methyltransferase [Frankia alni ACN14a]
gi|111151837|emb|CAJ63557.1| Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]
(Precorrin-6 methyltransferase) (Precorrin-6Y methylase)
[Frankia alni ACN14a]
Length = 489
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ L P P + D+G+G G I + V ES+ + +R
Sbjct: 309 TLAGLGPAPGELLWDVGAGSGSIAIEWMRAHPTCRAIAV---ESRADRVERIRRNAMNLG 365
Query: 123 ARG-KVFACRIQEAPQMITTCDVI 145
G +V A R + + D I
Sbjct: 366 VPGLRVVAGRAPQVLAGLPAPDAI 389
>gi|39932517|sp|Q7WGT9|UBIG_BORBR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
Length = 241
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 38/159 (23%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----Y 71
NV + +EK +W E +F H + LR+ +
Sbjct: 11 GVNVDQAEVEKFSALAA---RW---------WDPESEFKPLHAINPLRLGWIQETAGSLS 58
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG ++ + + G ++L E K A ++ + A
Sbjct: 59 GKRVLDVGCGGGILSESMAVAGAQVTG--IDLAEKSLKIARLHGL---ESGVKVDYRAVP 113
Query: 132 IQEAP-QMITTCDVISA--------------RALADLDT 155
++E + DV++ RA A L
Sbjct: 114 VEELATEQPGQYDVVTCMEMLEHVPDPASVVRACAALAK 152
>gi|33602448|ref|NP_890008.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
bronchiseptica RB50]
gi|33576887|emb|CAE33967.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
bronchiseptica RB50]
Length = 257
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 38/159 (23%)
Query: 18 TYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVE-DFWIRHVEDSLRVFQLHP-----Y 71
NV + +EK +W E +F H + LR+ +
Sbjct: 27 GVNVDQAEVEKFSALAA---RW---------WDPESEFKPLHAINPLRLGWIQETAGSLS 74
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG ++ + + G ++L E K A ++ + A
Sbjct: 75 GKRVLDVGCGGGILSESMAVAGAQVTG--IDLAEKSLKIARLHGL---ESGVKVDYRAVP 129
Query: 132 IQEAP-QMITTCDVISA--------------RALADLDT 155
++E + DV++ RA A L
Sbjct: 130 VEELATEQPGQYDVVTCMEMLEHVPDPASVVRACAALAK 168
>gi|330938543|gb|EGH42126.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 269
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLGSG G+ + + EG +++ E LR+ +
Sbjct: 45 LAHLPAQCKPSRWLDLGSGTGYFSRALAQTFTGSEGIALDIAEGM------LRHA-RPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P +C +I + L ++ +
Sbjct: 98 GAQHFIAGDAEHLPLRDQSCGLI----FSSLAV--QWCADF 132
>gi|324998970|ref|ZP_08120082.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Pseudonocardia
sp. P1]
Length = 170
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ L P P + D+G+G G GI S V ES+ ++A +
Sbjct: 7 TLAHLAPRPGELLWDVGAGSGSIGIEWMRAHPSCRAVAV---ESRPERADRVAANAAALG 63
Query: 123 ARG-KVFACRIQEAPQMITTCDVI 145
G +V +A + DV+
Sbjct: 64 VPGLRVVTGSAPDALAGLPGPDVV 87
>gi|313820042|gb|EFS57756.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
gi|313823149|gb|EFS60863.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
gi|314925464|gb|EFS89295.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
Length = 408
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 290 ILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG-RLETTDIDPLVDLRRDRVAGLALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSDTFTARRFRSPLEQAEEHE--------RAVAELDD-AGWA 382
>gi|257066245|ref|YP_003152501.1| modification methylase, HemK family [Anaerococcus prevotii DSM
20548]
gi|256798125|gb|ACV28780.1| modification methylase, HemK family [Anaerococcus prevotii DSM
20548]
Length = 262
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G+G G I + L + E + + + K S R ++ A F +
Sbjct: 97 KNRILDIGTGSGAISISLARNLPTSE---IIGSDIEEKALSLARENKKRLKASNVSF-IK 152
Query: 132 IQEAPQMITTCDVISA 147
++ D+I +
Sbjct: 153 SDLFEEISEKFDIIIS 168
>gi|269797389|ref|YP_003311289.1| cyclopropane-fatty-acyl-phospholipid synthase [Veillonella parvula
DSM 2008]
gi|269094018|gb|ACZ24009.1| Cyclopropane-fatty-acyl-phospholipid synthase [Veillonella parvula
DSM 2008]
Length = 390
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L + +D+G G GF I + + ++G L E + KK +
Sbjct: 155 VHHILDKLYL----KEGMTLLDIGCGWGFLLIEAARKY-GVKGYGCTLSEEQWKKG---Q 206
Query: 116 YVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
+++ G+V I ++ T D I +
Sbjct: 207 ERIKEYGLEGQVEIELIDYRDVAASGRTFDRIVS 240
>gi|134277809|ref|ZP_01764524.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 305]
gi|134251459|gb|EBA51538.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 305]
Length = 408
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLRAPDAVFVGGGVSR 328
>gi|156120799|ref|NP_001095546.1| protein arginine N-methyltransferase 3 [Bos taurus]
gi|151554312|gb|AAI47871.1| PRMT3 protein [Bos taurus]
gi|296471855|gb|DAA13970.1| protein arginine methyltransferase 3 [Bos taurus]
Length = 527
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G + + + + V+ E + +R + K
Sbjct: 247 PHIFKDKVVLDVGCGTGILSMFAAKAGAK-KVLGVDQSEILYQAMDIIR--LNKLEDTVT 303
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ +I+E + DVI +
Sbjct: 304 LIKGKIEEVRLPVEKVDVIIS 324
>gi|167902683|ref|ZP_02489888.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei NCTC 13177]
gi|254197509|ref|ZP_04903931.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei S13]
gi|169654250|gb|EDS86943.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei S13]
Length = 408
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLRAPDAVFVGGGVSR 328
>gi|91776826|ref|YP_546582.1| HemK family modification methylase [Methylobacillus flagellatus KT]
gi|91710813|gb|ABE50741.1| [protein release factor]-glutamine N5-methyltransferase
[Methylobacillus flagellatus KT]
Length = 284
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
Query: 64 RVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
P +D+G+G G GI +++ + V +++ + R ++
Sbjct: 108 AALDRIPVGQTCEILDMGTGTGAIGITLALERPQAK---VTIVDYSEAALAIARENARQL 164
Query: 122 AARGKVFACRIQEAPQMITT-CDVISA 147
+A V A R + D+I +
Sbjct: 165 SAHN-VTALRSDWFSALGGRCFDLIVS 190
>gi|27375325|ref|NP_766854.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium
japonicum USDA 110]
gi|39932527|sp|Q89XU2|UBIG_BRAJA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|27348461|dbj|BAC45479.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium
japonicum USDA 110]
Length = 253
Score = 34.7 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 6/74 (8%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G G G S G V ++ + + K+ ++
Sbjct: 73 RVLDIGCGAGLLCEPLSRL-----GAQVIGVDPSQSNIAAAKLHADKSHLAIDYRCTTVE 127
Query: 134 EAPQMITTCDVISA 147
E D++ A
Sbjct: 128 EI-DPRERFDIVLA 140
>gi|330833924|ref|YP_004408652.1| rRNA methyltransferase small [Metallosphaera cuprina Ar-4]
gi|329566063|gb|AEB94168.1| rRNA methyltransferase small [Metallosphaera cuprina Ar-4]
Length = 186
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P +DLG G G GI ++Q S+ V ++++ + V++ + +V
Sbjct: 43 IIPKEGTVVDLGCGYGPIGIYLALQNPSLR---VYMLDANPLAVKASKENVERYKLKERV 99
Query: 128 FACRIQEAPQMITTCDVISA 147
R + I +
Sbjct: 100 TVLRSDVLSALDVKASAIFS 119
>gi|297183480|gb|ADI19611.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
[uncultured SAR11 cluster bacterium HF0770_37D02]
Length = 241
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)
Query: 43 INLVSSSTVEDFWIRHV-EDSLRVFQLHPYPSI-WIDLGSGGGFPGIITSIQLSSIEGGL 100
N +++ I H D P I +D+G GGG G
Sbjct: 32 FNPTRIKFIKEKLIYHFGLD---PKTQEPLKKINILDIGCGGGLLCEPLKRL-----GAT 83
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
V I++ R ++ C ++ DVI
Sbjct: 84 VTGIDASKNNIEVARLHAKEMNLSINYIHCSPEDL-TFKNKFDVI 127
>gi|326775438|ref|ZP_08234703.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
gi|326655771|gb|EGE40617.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
Length = 310
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 5/87 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P +D+GSG G + + E V+ + +A + ++
Sbjct: 60 IAGLPTAPKVRRVLDIGSGPGVVSCLLAEVFPEAEVVAVDATPALLDRA---KDRARRLG 116
Query: 123 ARGKVFACRIQ--EAPQMITTCDVISA 147
+ + + D+I A
Sbjct: 117 LSDRFRTLEAELPADFDRLGEADLIWA 143
>gi|262201849|ref|YP_003273057.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Gordonia bronchialis DSM 43247]
gi|262085196|gb|ACY21164.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Gordonia bronchialis DSM 43247]
Length = 314
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DL SG G + +I + V +E + ++LR V++ G+V R
Sbjct: 127 PLRIVDLCSGSG--ALALAIAH-RLPAAEVVAVEVDDAALTWLRRNVERLGPAGRVHVHR 183
Query: 132 IQEAPQ-------MITTCDVISA 147
+ D++ +
Sbjct: 184 ADVTDHDAMSALFDDASVDLVVS 206
>gi|229541883|ref|ZP_04430943.1| Methyltransferase type 11 [Bacillus coagulans 36D1]
gi|229326303|gb|EEN91978.1| Methyltransferase type 11 [Bacillus coagulans 36D1]
Length = 237
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +D G G G T+ ++ G V ++ R V+ +
Sbjct: 34 EHIGKKTTVLDAGCGTGQ----TAAYVAQQYGCQVTGLDHHQLMVEKARKRVRSLGLPIQ 89
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ + P + D++ +
Sbjct: 90 IVHGNTEALPFADSQFDLVLS 110
>gi|254389222|ref|ZP_05004451.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|326444951|ref|ZP_08219685.1| hypothetical protein SclaA2_27970 [Streptomyces clavuligerus ATCC
27064]
gi|37575544|gb|AAQ93538.1| hypothetical protein pSCL2.4.H9.7 [Streptomyces clavuligerus]
gi|197702938|gb|EDY48750.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 100
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARA-LADLD-TLLEYSFP 162
+ + R +P+ D++ AR +A L L +++ P
Sbjct: 18 ELVEVPATIEGIRATLSPERAAEFDLVIARTHVAKLPQVLADWALP 63
>gi|268562034|ref|XP_002638482.1| Hypothetical protein CBG12910 [Caenorhabditis briggsae]
gi|187029081|emb|CAP31806.1| CBR-PRMT-1 protein [Caenorhabditis briggsae AF16]
Length = 345
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ Q + +D+GSG G I S+ + V +E N + R +++
Sbjct: 49 NSIYHNQHLFKDKVVMDVGSGTG----ILSMFAAKAGAKKVFAMEFSNMALTS-RQIIKD 103
Query: 121 TAAR--GKVFACRIQEAPQMITTC---DVISA 147
+V ++++ ++ D+I +
Sbjct: 104 NNLDHIVEVIQAKVEDVKELPGGYEKVDIIIS 135
>gi|307611249|emb|CBX00904.1| hypothetical protein LPW_26071 [Legionella pneumophila 130b]
Length = 356
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 26/87 (29%), Gaps = 11/87 (12%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+G G G I+ + + +L + + + V
Sbjct: 168 LVDKLNQGIQVLDIGCGYGRALILMAKTYPQSQFTGYDLCDET------IAHAVHSAK-E 220
Query: 125 GKVFACRIQE----APQMITTCDVISA 147
K+ ++ D+I++
Sbjct: 221 NKIQNIHFEKMDLSVWDEREKYDLITS 247
>gi|296132761|ref|YP_003640008.1| Methyltransferase type 11 [Thermincola sp. JR]
gi|296031339|gb|ADG82107.1| Methyltransferase type 11 [Thermincola potens JR]
Length = 293
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 27/87 (31%), Gaps = 14/87 (16%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G I + V ++ + L+ +K + R
Sbjct: 80 GMTVLDIGCGPGNYTIPLA-----KRAAHVWALDPASNMLEILKERAEKEGVFNITYINR 134
Query: 132 ----IQ-EAPQMITTCDVISARALADL 153
++ + + D++ A +
Sbjct: 135 PWEEVELDKEGWLGKFDLV----FASM 157
>gi|300769799|ref|ZP_07079679.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300763250|gb|EFK60066.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 285
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P ID+G+G G I I + V+ ++ + + + +K
Sbjct: 116 PLKIIDIGTGSG--CIPV-ILKKHMPSAHVSALDISKEAIAVAKRNAKKLGTDIHFVNAD 172
Query: 132 IQEAPQMITT--CDVISA 147
I E + T D+I +
Sbjct: 173 ILEWEYLFTEQLYDIIVS 190
>gi|227485570|ref|ZP_03915886.1| type 11 methyltransferase [Anaerococcus lactolyticus ATCC 51172]
gi|227236436|gb|EEI86451.1| type 11 methyltransferase [Anaerococcus lactolyticus ATCC 51172]
Length = 275
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL-IESKNKKASFLRYVVQKTAARGKV 127
P + +D+G G G + + + + +V I S K+ F + + + A V
Sbjct: 104 IPDGGVGLDVGCGSG--ALTIACAKKNPKATMVGCDIWSGTYKSEFSKKLCEDNAKLEGV 161
Query: 128 FACRIQE-----APQMITTCDVISA 147
+ +E P + D +++
Sbjct: 162 ENVKFEEGNAVNLPFEDESFDAVTS 186
>gi|182434921|ref|YP_001822640.1| hypothetical protein SGR_1128 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178463437|dbj|BAG17957.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 310
Score = 34.7 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 5/87 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ P +D+GSG G + + E V+ + +A + ++
Sbjct: 60 IAGLPTAPKVRRVLDIGSGPGVVSCLLAEVFPEAEVVAVDATPALLDRA---KDRARRLG 116
Query: 123 ARGKVFACRIQ--EAPQMITTCDVISA 147
+ + + D+I A
Sbjct: 117 LSDRFRTLEAELPADFDRLGEADLIWA 143
>gi|323191549|gb|EFZ76809.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
RN587/1]
Length = 256
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|322699754|gb|EFY91513.1| ATPase type 13A2 [Metarhizium acridum CQMa 102]
Length = 1529
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 2/73 (2%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG G G + + L + +V S+ +K ++ V + +
Sbjct: 1307 ILDLGCGWGSGALYFAEMLPNSN--IVAFSNSRTQKHYIESEAARRNITNVSVITGDVVD 1364
Query: 135 APQMITTCDVISA 147
+ D I +
Sbjct: 1365 YEFEPESFDRIVS 1377
>gi|322513991|ref|ZP_08067066.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus ureae
ATCC 25976]
gi|322120217|gb|EFX92175.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus ureae
ATCC 25976]
Length = 236
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + G V I+ +
Sbjct: 30 HLLNPLRLDYIQQKSNGLFGKKVLDVGCGGGILSEAMARA-----GANVTGIDMTTEPLE 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
R +++ I++ Q DVI+
Sbjct: 85 IARKHAEESGLTIDYQQATIEDFVQNQTACHAEKFDVITC 124
>gi|283797151|ref|ZP_06346304.1| putative N-6 adenine-specific DNA methylase [Clostridium sp. M62/1]
gi|291075568|gb|EFE12932.1| putative N-6 adenine-specific DNA methylase [Clostridium sp. M62/1]
Length = 250
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + +DLG+G G I + + EG +E + A R V
Sbjct: 42 LSGYASVKPGERALDLGTGTGI--IPI-LLEAKTEGSYFAGLEIQENMAEMARRSVWLNG 98
Query: 123 ARG--KVFACRIQEAPQMIT--TCDVISA 147
G ++ I+EA ++ + DV+++
Sbjct: 99 LEGKIEIVTGDIKEAGRIFGAASFDVVTS 127
>gi|149923006|ref|ZP_01911424.1| Methyltransferase [Plesiocystis pacifica SIR-1]
gi|149816127|gb|EDM75637.1| Methyltransferase [Plesiocystis pacifica SIR-1]
Length = 314
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 75 WIDLGSGGGFPG-IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-----KVF 128
+D+G G G G ++ + E + ++++ A+FL Y ++ A+G +
Sbjct: 49 LLDVGCGAGHWGCLVLGLM---DEAATLTGVDAE---AAFLDYARERAEAKGFKDRSRFV 102
Query: 129 ACRIQEAPQMITTCDVISA 147
R++ P + DV++
Sbjct: 103 EGRVEALPFPDASFDVVTC 121
>gi|126642198|ref|YP_001085182.1| methyl transferase [Acinetobacter baumannii ATCC 17978]
Length = 206
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + + V + + Q F
Sbjct: 37 LPKNANIVDLGTGTGAIALALASERPNW---FVTATDIYAPTLDVAKENAQTHGLHHVKF 93
Query: 129 ACRIQEAPQMITTCDVISA 147
AC D+I +
Sbjct: 94 ACGAWFEALEPQQFDLIVS 112
>gi|116495718|ref|YP_807452.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei ATCC 334]
gi|116105868|gb|ABJ71010.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus casei ATCC
334]
Length = 198
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 31/113 (27%), Gaps = 14/113 (12%)
Query: 47 SSSTVEDFWIRHVED--S----LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
++ + +H D S + +D+G+G G G+ + +
Sbjct: 28 RFTSDNGVFSKHTVDFGSRVLIATILAEELPTGPILDVGTGYGPIGLALAKHFPDRQ--- 84
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA----RA 149
V + + + + + Q+ VI RA
Sbjct: 85 VTMSDVNERALALAQRNATDNDISNVTIVESSM-YDQIDGQFGVIVTNPPIRA 136
>gi|193067697|ref|ZP_03048664.1| methyltransferase, UbiE/COQ5 family [Escherichia coli E110019]
gi|300926570|ref|ZP_07142356.1| methyltransferase domain protein [Escherichia coli MS 182-1]
gi|301326094|ref|ZP_07219490.1| methyltransferase domain protein [Escherichia coli MS 78-1]
gi|192959109|gb|EDV89545.1| methyltransferase, UbiE/COQ5 family [Escherichia coli E110019]
gi|300417428|gb|EFK00739.1| methyltransferase domain protein [Escherichia coli MS 182-1]
gi|300847154|gb|EFK74914.1| methyltransferase domain protein [Escherichia coli MS 78-1]
Length = 256
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEVRQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|121599809|ref|YP_992927.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei SAVP1]
gi|167004565|ref|ZP_02270323.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei PRL-20]
gi|121228619|gb|ABM51137.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei SAVP1]
gi|243060174|gb|EES42360.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei PRL-20]
Length = 408
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLRAPDAVFVGGGVSR 328
>gi|315108248|gb|EFT80224.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
Length = 408
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 290 ILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG-RLETTDIDPLVDLRRDRVAGLALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSDTFTARRFRSPLEQAEEHE--------RAVAELDD-AGWA 382
>gi|300113475|ref|YP_003760050.1| glycine dehydrogenase [Nitrosococcus watsonii C-113]
gi|299539412|gb|ADJ27729.1| Glycine dehydrogenase (decarboxylating) [Nitrosococcus watsonii
C-113]
Length = 452
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 18/59 (30%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
L + VE + + + + D+G GG GI + L+
Sbjct: 371 LTALPGVEQVFEKPFFHDAVLRFPISASQVLSDVGQGGVLAGIKLEQAYPELSDTLLVC 429
>gi|291446742|ref|ZP_06586132.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291349689|gb|EFE76593.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 282
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D L S +++G G G + + G + +E+ + A+ R +
Sbjct: 47 LYDDLADLAGAVPGSRVLEIGCGTGQATVPLA-----GRGCRITAVEAGPRMAATARRNL 101
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
++ A +V + P DV+ A
Sbjct: 102 AESPA-AEVVTAEFESWPLPAEPFDVVLA 129
>gi|269792113|ref|YP_003317017.1| Methyltransferase type 11 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099748|gb|ACZ18735.1| Methyltransferase type 11 [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 264
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + L P + +DLGSG G ++ ++ S +++ + +A ++
Sbjct: 64 IAIGSLKP-GEVVLDLGSGAGLDVMLAALKVGPSGRVYGLDMTDEMLARA---EENRRRA 119
Query: 122 AARGKVF-ACRIQEAPQMITTCDVISA 147
+F ++E P + DV+ +
Sbjct: 120 GLENVIFIKGHMEEIPLPDRSVDVVIS 146
>gi|146276016|ref|YP_001166176.1| methenyltetrahydrofolate cyclohydrolase [Novosphingobium
aromaticivorans DSM 12444]
gi|145322707|gb|ABP64650.1| Methenyltetrahydrofolate cyclohydrolase [Novosphingobium
aromaticivorans DSM 12444]
Length = 288
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 17/112 (15%)
Query: 57 RHVEDSLRVFQ----------LHPYPSIWIDLGSGGGFPGIITSIQL------SSIEGGL 100
RH+ D+ V HP + G+GG P + + G
Sbjct: 102 RHI-DAALVLDRIDPGKDVDGFHPVNVGRLSTGTGGLVPCTPLGVMMLLDSVIDDYRGLK 160
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALAD 152
V +I N + ++ + A V ++ P + D+I A A A
Sbjct: 161 VVVIGKSNIVGKPVSMLLLEREATVTVTHIETRDLPDVARKADIIVAAAGAP 212
>gi|332675164|gb|AEE71980.1| conserved protein [Propionibacterium acnes 266]
Length = 333
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 215 ILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG-RLETTDIDPLVDLRRDRVAGLALV 273
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 274 LDSDTFTARRFRSPLEQAEEHE--------RAVAELDD-AGWA 307
>gi|324507728|gb|ADY43271.1| Protein arginine N-methyltransferase 8 [Ascaris suum]
Length = 379
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 10/86 (11%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-- 124
+ + +D+GSG G I S+ + V IE N A+ + +V+
Sbjct: 89 KHLFKDKVVMDVGSGTG----ILSMFAARAGARKVIAIEFSNM-ATQSKQIVKDNNLDHI 143
Query: 125 GKVFACRIQ---EAPQMITTCDVISA 147
V +++ E P I DVI +
Sbjct: 144 ITVVHGKVEDVTELPDGIEKVDVIIS 169
>gi|313772504|gb|EFS38470.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
gi|313809739|gb|EFS47460.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
gi|313830649|gb|EFS68363.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
gi|313833869|gb|EFS71583.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
gi|314973651|gb|EFT17747.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
gi|314976244|gb|EFT20339.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
gi|314983547|gb|EFT27639.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
gi|315096271|gb|EFT68247.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
gi|327325907|gb|EGE67697.1| hypothetical protein HMPREF9338_01818 [Propionibacterium acnes
HL096PA2]
gi|327446214|gb|EGE92868.1| hypothetical protein HMPREF9571_01958 [Propionibacterium acnes
HL043PA2]
gi|327447804|gb|EGE94458.1| hypothetical protein HMPREF9570_00635 [Propionibacterium acnes
HL043PA1]
gi|328760596|gb|EGF74164.1| hypothetical protein HMPREF9343_01877 [Propionibacterium acnes
HL099PA1]
Length = 408
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 290 ILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG-RLETTDIDPLVDLRRDRVAGLALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSDTFTARRFRSPLEQAEEHE--------RAVAELDD-AGWA 382
>gi|304311493|ref|YP_003811091.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1]
gi|301797226|emb|CBL45446.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1]
Length = 289
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + +DLG+G G + + V + A+ Q+
Sbjct: 108 ALARAPENCTTVLDLGTGTGAIALALKHERRHWH---VTATDRVEMAAALASENAQQLGL 164
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
+V A D+I +
Sbjct: 165 SLEVLESDWLAALTGR-RFDLIVS 187
>gi|300744004|ref|ZP_07073024.1| putative methyltransferase small domain protein [Rothia
dentocariosa M567]
gi|300380365|gb|EFJ76928.1| putative methyltransferase small domain protein [Rothia
dentocariosa M567]
Length = 209
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P+ +D+G G G + ++ E V I+ ++ S + +
Sbjct: 57 PHGKYMLDIGCGWGPITLSLAMLAPQSE---VYGIDVNSRSLSLTEQNARALGMHNVSVS 113
Query: 130 CRIQEAPQMITTCDVISA 147
+ P + D I +
Sbjct: 114 TPDEIDPTLR--FDTIWS 129
>gi|289426157|ref|ZP_06427903.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|289153322|gb|EFD02037.1| conserved hypothetical protein [Propionibacterium acnes SK187]
gi|313791796|gb|EFS39907.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
gi|313802117|gb|EFS43349.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
gi|313813218|gb|EFS50932.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
gi|313838449|gb|EFS76163.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
gi|314963094|gb|EFT07194.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
gi|315077558|gb|EFT49616.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
gi|315107067|gb|EFT79043.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
gi|327452854|gb|EGE99508.1| hypothetical protein HMPREF9584_01275 [Propionibacterium acnes
HL092PA1]
Length = 408
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 290 ILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG-RLETTDIDPLVDLRRDRVAGLALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSDTFTARRFRSPLEQAEEHE--------RAVAELDD-AGWA 382
>gi|226197441|ref|ZP_03793018.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei Pakistan 9]
gi|225930820|gb|EEH26830.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei Pakistan 9]
Length = 408
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLRAPDAVFVGGGVSR 328
>gi|289426832|ref|ZP_06428558.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|295130322|ref|YP_003580985.1| hypothetical protein HMPREF0675_3815 [Propionibacterium acnes
SK137]
gi|289159921|gb|EFD08099.1| conserved hypothetical protein [Propionibacterium acnes J165]
gi|291375956|gb|ADD99810.1| conserved hypothetical protein [Propionibacterium acnes SK137]
gi|313764746|gb|EFS36110.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
gi|313815811|gb|EFS53525.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
gi|313818280|gb|EFS55994.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
gi|313825574|gb|EFS63288.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
gi|313827812|gb|EFS65526.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
gi|314915238|gb|EFS79069.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
gi|314918533|gb|EFS82364.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
gi|314919797|gb|EFS83628.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
gi|314931811|gb|EFS95642.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
gi|314955968|gb|EFT00366.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
gi|314958363|gb|EFT02466.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
gi|314960285|gb|EFT04387.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
gi|314968070|gb|EFT12169.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
gi|314978272|gb|EFT22366.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
gi|314987736|gb|EFT31827.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
gi|314990214|gb|EFT34305.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
gi|315080342|gb|EFT52318.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
gi|315084601|gb|EFT56577.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
gi|315085937|gb|EFT57913.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
gi|315088645|gb|EFT60621.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
gi|315098254|gb|EFT70230.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
gi|315101056|gb|EFT73032.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
gi|327332220|gb|EGE73957.1| hypothetical protein HMPREF9337_01426 [Propionibacterium acnes
HL096PA3]
gi|327442842|gb|EGE89496.1| hypothetical protein HMPREF9568_02551 [Propionibacterium acnes
HL013PA2]
gi|327451064|gb|EGE97718.1| hypothetical protein HMPREF9581_02399 [Propionibacterium acnes
HL087PA3]
gi|327453581|gb|EGF00236.1| hypothetical protein HMPREF9586_01537 [Propionibacterium acnes
HL083PA2]
gi|328753098|gb|EGF66714.1| hypothetical protein HMPREF9579_02162 [Propionibacterium acnes
HL087PA1]
gi|328753752|gb|EGF67368.1| hypothetical protein HMPREF9563_02095 [Propionibacterium acnes
HL020PA1]
gi|328759158|gb|EGF72774.1| hypothetical protein HMPREF9588_00310 [Propionibacterium acnes
HL025PA2]
Length = 408
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 290 ILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG-RLETTDIDPLVDLRRDRVAGLALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSDTFTARRFRSPLEQAEEHE--------RAVAELDD-AGWA 382
>gi|297190845|ref|ZP_06908243.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197722290|gb|EDY66198.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 289
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 32/100 (32%), Gaps = 13/100 (13%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D+GSG G + + E V+ ++A R A R + +
Sbjct: 49 RRVLDIGSGPGVITGLLAEAFPYAEVVAVDATAPLLERAQA-RAARHGQADRVRTHHAEL 107
Query: 133 QEAPQMITTCDVISA----------RALADLDTLLEYSFP 162
+ + + D++ A RA L L P
Sbjct: 108 PDGIEELGEADLVWAAGSVHHLGDQRA--ALGALARLVRP 145
>gi|218778306|ref|YP_002429624.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Desulfatibacillum alkenivorans AK-01]
gi|218759690|gb|ACL02156.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Desulfatibacillum alkenivorans AK-01]
Length = 405
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + QL +W DLG+G G G+ S+ L G V +E + ++ ++
Sbjct: 241 SLSMLQLESSSILW-DLGAGSGSVGLEASLFLPQ---GFVFAVEKNAARVEQIQANAERF 296
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
+ V E + D +
Sbjct: 297 NVQNLSVTRGEAPEGLDDLPRPDRV 321
>gi|138895091|ref|YP_001125544.1| hypothetical protein GTNG_1429 [Geobacillus thermodenitrificans
NG80-2]
gi|196248328|ref|ZP_03147029.1| Methyltransferase type 11 [Geobacillus sp. G11MC16]
gi|134266604|gb|ABO66799.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196212053|gb|EDY06811.1| Methyltransferase type 11 [Geobacillus sp. G11MC16]
Length = 232
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ + +D+G G G T+ ++ G V I+ + + A ++
Sbjct: 32 YIDHSTSVLDVGCGTGQ----TAAYIAEQYGADVTAIDLHPTMIAKAKQRFAAMAVPVRL 87
Query: 128 FACRIQEAPQMITTCDVISA 147
+ ++ P T D++ +
Sbjct: 88 YRASVEALPFPAETFDLVLS 107
>gi|126438672|ref|YP_001058987.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 668]
gi|126218165|gb|ABN81671.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 668]
Length = 408
Score = 34.7 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLRAPDAVFVGGGVSR 328
>gi|326386045|ref|ZP_08207669.1| 3-demethylubiquinone-9 3-methyltransferase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209270|gb|EGD60063.1| 3-demethylubiquinone-9 3-methyltransferase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 246
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 7/76 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G + GG V +++ + + +
Sbjct: 67 GRRALDVGCGAGLLAEPLARM-----GGTVTAVDAAAENIAIATAHAEAGGLTIDYRHGD 121
Query: 132 IQEAPQMITTCDVISA 147
I E + D++++
Sbjct: 122 IAEMG--LGGFDLVTS 135
>gi|307245100|ref|ZP_07527193.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307254055|ref|ZP_07535902.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258511|ref|ZP_07540248.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853989|gb|EFM86201.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862980|gb|EFM94927.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306867415|gb|EFM99266.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 234
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + G V I+ +
Sbjct: 30 HLLNPLRLDYIQQKSNGLFGKKVLDVGCGGGILSEAMAKA-----GANVTGIDMTTEPLD 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
R +++ I++ Q DVI+
Sbjct: 85 VARKHAEESGLTIDYRQTTIEDFVQNQTACHAEKFDVITC 124
>gi|303249556|ref|ZP_07335763.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307251817|ref|ZP_07533719.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302651630|gb|EFL81779.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306860724|gb|EFM92735.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 234
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + G V I+ +
Sbjct: 30 HLLNPLRLDYIQQKSNGLFGKKVLDVGCGGGILSEAMAKA-----GANVTGIDMTTEPLD 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
R +++ I++ Q DVI+
Sbjct: 85 VARKHAEESGLTIDYRQTTIEDFVQNQTACHAEKFDVITC 124
>gi|294793024|ref|ZP_06758170.1| cyclopropane-fatty-acyl-phospholipid synthase [Veillonella sp.
6_1_27]
gi|294455969|gb|EFG24333.1| cyclopropane-fatty-acyl-phospholipid synthase [Veillonella sp.
6_1_27]
Length = 390
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L + +D+G G GF I + + ++G L E + KK +
Sbjct: 155 VHHILDKLYL----KEGMTLLDIGCGWGFLLIEAARKY-GVKGYGCTLSEEQWKKG---Q 206
Query: 116 YVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
+++ G+V I ++ T D I +
Sbjct: 207 ERIKEYGLEGQVEIELIDYRDVAASGRTFDRIVS 240
>gi|293413465|ref|ZP_06656114.1| SAM-dependent methyltransferase [Escherichia coli B185]
gi|291433523|gb|EFF06496.1| SAM-dependent methyltransferase [Escherichia coli B185]
Length = 256
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|282852112|ref|ZP_06261470.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
224-1]
gi|282556872|gb|EFB62476.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
224-1]
Length = 226
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G I +I S + V + ++ + + +
Sbjct: 80 LAMERALVKPMSVLDIGTGSG----ILAIAASKLGASHVLGTDISDEAVTAAKENIALND 135
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D+I A LA D LLE
Sbjct: 136 VNNINVR-KANLLKDIDDKYDLIVANILA--DILLEL 169
>gi|268319353|ref|YP_003293009.1| methyltransferase , ribosomal protein L11 [Lactobacillus johnsonii
FI9785]
gi|262397728|emb|CAX66742.1| methyltransferase , ribosomal protein L11 [Lactobacillus johnsonii
FI9785]
Length = 315
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G I +I S + V + ++ + + +
Sbjct: 169 LAMERALVKPMSVLDVGTGSG----ILAIAASKLGASHVLGTDISDEAVTAAKENIALNN 224
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D+I A LA D LLE
Sbjct: 225 IDNIDVR-KANLLKDINEKYDLIVANILA--DILLEL 258
>gi|238020002|ref|ZP_04600428.1| hypothetical protein VEIDISOL_01878 [Veillonella dispar ATCC 17748]
gi|237863526|gb|EEP64816.1| hypothetical protein VEIDISOL_01878 [Veillonella dispar ATCC 17748]
Length = 390
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L + +D+G G GF I + + ++G L E + KK +
Sbjct: 155 VHHILDKLYL----KEGMTLLDIGCGWGFLLIEAARKY-GVKGYGCTLSEEQWKKG---Q 206
Query: 116 YVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
++K G+V I ++ T D I +
Sbjct: 207 ERIKKFGLEGQVEIELIDYRDVAASGRTFDRIVS 240
>gi|221640671|ref|YP_002526933.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
KD131]
gi|254789995|sp|B9KPP7|UBIG_RHOSK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|221161452|gb|ACM02432.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
KD131]
Length = 247
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 22/80 (27%), Gaps = 5/80 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L +D+G GGG + + V ++ + + +++
Sbjct: 57 APLPFEGLRLLDIGCGGGLLSEPMARLGAE-----VIGADAAPRNIPVAKLHAEQSGLAI 111
Query: 126 KVFACRIQEAPQMITTCDVI 145
+ DV+
Sbjct: 112 DYRNTTAEALAAAGERFDVV 131
>gi|190149557|ref|YP_001968082.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307262877|ref|ZP_07544501.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226725530|sp|B3H0C8|UBIG_ACTP7 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|189914688|gb|ACE60940.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306871782|gb|EFN03502.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 234
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + G V I+ +
Sbjct: 30 HLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMAKA-----GANVTGIDMTTEPLD 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
R +++ I++ Q DVI+
Sbjct: 85 VARKHAEESGLTIDYRQTTIEDFVQNQTACHAEKFDVITC 124
>gi|146302843|ref|YP_001190159.1| methyltransferase small [Metallosphaera sedula DSM 5348]
gi|145701093|gb|ABP94235.1| 16S rRNA m(2)G 1207 methyltransferase [Metallosphaera sedula DSM
5348]
Length = 186
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P D+G G G GI +I + V +++ R V++ +V
Sbjct: 43 IIPEEGAVADVGCGYGPIGIYVAIINPRL---SVYMLDVNPLAVKASRENVERYGLGDRV 99
>gi|187921709|ref|YP_001890741.1| type 11 methyltransferase [Burkholderia phytofirmans PsJN]
gi|187720147|gb|ACD21370.1| Methyltransferase type 11 [Burkholderia phytofirmans PsJN]
Length = 366
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 8/82 (9%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+DLG G G + + + + +V L S ++A F+ + V
Sbjct: 135 DGQRILDLGCGWGSLSLWLAARYPNAR--IVALSNSHGQRA-FIEARAAQAGLHNLSVVT 191
Query: 130 CRIQEAP----QMITTCDVISA 147
I + Q+ D + +
Sbjct: 192 GNIVDFEFDNAQLGRGFDRVVS 213
>gi|115374565|ref|ZP_01461845.1| protein arginine N-methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|310823744|ref|YP_003956102.1| heat shock family protein 70 [Stigmatella aurantiaca DW4/3-1]
gi|115368435|gb|EAU67390.1| protein arginine N-methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|309396816|gb|ADO74275.1| Heat shock family protein 70 [Stigmatella aurantiaca DW4/3-1]
Length = 322
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 11/87 (12%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S V + +D+GSG G S+ + V ES A+ + +++
Sbjct: 55 SQAVRRAVVPGMCVLDVGSGSGL----LSMMATQAGANTVISCESVEPVAAVAQRIIESN 110
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR 148
F RI P++ + D+I R
Sbjct: 111 G-----FHERITIVPKV--SFDLIVGR 130
>gi|114777341|ref|ZP_01452338.1| hemK protein [Mariprofundus ferrooxydans PV-1]
gi|114552123|gb|EAU54625.1| hemK protein [Mariprofundus ferrooxydans PV-1]
Length = 279
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 19/118 (16%)
Query: 48 SSTVEDFWIR----------------HVEDS-LRVFQLHPYPSIWIDLGSGGGFPGIITS 90
+ ++FW R H+ ++ L F P + D+G+G G + +
Sbjct: 74 ITGEKEFWSRPFRVSPDVLIPRPETEHLIEAVLARFPDQSAPYQFCDIGTGSGCIAVTLA 133
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ-MITTCDVISA 147
+ ++ E+ + + A+R + + +A Q DV+ +
Sbjct: 134 AEYPHAAVTATDISEASL-RMAQTNAAALNVASRLAWRSGDLLQALQPEDGPFDVVIS 190
>gi|221135299|ref|ZP_03561602.1| peptide release factor-glutamine N5-methyltransferase(HemK)
[Glaciecola sp. HTCC2999]
Length = 286
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ PY +DLG+G G + +Q +E V ++ + + Q A +
Sbjct: 107 LVIAKPYIKRVLDLGTGTGAIALSIILQRPELE---VLGVDFVPEAVMLAQQNAQNLAPK 163
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ + + DVI +
Sbjct: 164 SNISFKQSDWFSHVDGRFDVIVS 186
>gi|319937658|ref|ZP_08012061.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. 29_1]
gi|319807093|gb|EFW03707.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. 29_1]
Length = 201
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 24/123 (19%)
Query: 41 KKINLVSSSTVE-------DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQL 93
+K L S + D+ R + D + + +D+G G G G+ +
Sbjct: 23 RKHQLTFISDIGVFSKERVDYGSRVLLDCM---DIQANQRSLLDVGCGYGTLGVSLKKEY 79
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI---QEAPQMITTCDVISA--- 147
+ V +++ + ++ ++ V + ++ T DVI +
Sbjct: 80 PWLH---VEMVDVNERAV----HLANQSCQYNDVEDIKAYLSFAYENVVGTFDVIVSNPP 132
Query: 148 -RA 149
RA
Sbjct: 133 IRA 135
>gi|317495350|ref|ZP_07953720.1| ribosomal protein L11 methyltransferase [Gemella moribillum M424]
gi|316914772|gb|EFV36248.1| ribosomal protein L11 methyltransferase [Gemella moribillum M424]
Length = 311
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + ID+G G G I SI S + G + ++ R
Sbjct: 169 LEKYVKPHDNVIDVGCGSG----ILSIAASYLTDGNLKAVDLDKLAVDVSRENFALNNLE 224
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
++ + DVI A
Sbjct: 225 NRIEVEEASLLTKETKKYDVIVA 247
>gi|299770870|ref|YP_003732896.1| Methyltransferase domain protein [Acinetobacter sp. DR1]
gi|298700958|gb|ADI91523.1| Methyltransferase domain protein [Acinetobacter sp. DR1]
Length = 255
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFA 129
++ +DLG GGG + LV + ++ + + + V
Sbjct: 42 EKAVVLDLGCGGGHVSYNVA-----PHADLVFAYDLSHEMLDTVSKAASQRKLKNIFVQQ 96
Query: 130 CRIQEAPQMITTCDVISAR 148
++ P DV+ +R
Sbjct: 97 GIAEDMPFSDQQFDVVISR 115
>gi|217977297|ref|YP_002361444.1| methyltransferase small [Methylocella silvestris BL2]
gi|217502673|gb|ACK50082.1| methyltransferase small [Methylocella silvestris BL2]
Length = 257
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 17/89 (19%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ + +D+G+G G I + G + L+E A + G
Sbjct: 45 DFSGLVLDIGAGVGAASIALAATRP---GARIGLVEID---AEAAELARKNLDLNGIAQR 98
Query: 130 CRIQEAPQM-----------ITTCDVISA 147
R+ EA + T D++ +
Sbjct: 99 GRVFEADALSPPSRRAAGLADETADLVIS 127
>gi|313747440|ref|NP_001186400.1| protein arginine N-methyltransferase 3 [Gallus gallus]
Length = 526
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G + + + + V+ E + +R + K
Sbjct: 246 PHIFKDKVVLDVGCGTGILSMFAAKAGAK-KVIGVDQSEIIYQAMDIIR--LNKLENTIT 302
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ RI+E + DVI +
Sbjct: 303 LIKGRIEEVDLPLEKVDVIIS 323
>gi|116254022|ref|YP_769860.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
gi|166234773|sp|Q1MBA9|UBIG_RHIL3 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|115258670|emb|CAK09774.1| putative 3-demethylubiquinone-9 3-methyltransferase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 248
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 21/75 (28%), Gaps = 5/75 (6%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + G V + K + + A
Sbjct: 64 EGLRVLDIGCGGGLLSEPVARM-----GASVVGADPSEKNIGIASTHAKASGVSVDYRAV 118
Query: 131 RIQEAPQMITTCDVI 145
+ + T D++
Sbjct: 119 TAEGLAEAGETFDIV 133
>gi|110640425|ref|YP_668153.1| methyltransferase YafE [Escherichia coli 536]
gi|191171471|ref|ZP_03033020.1| methyltransferase, UbiE/COQ5 family [Escherichia coli F11]
gi|300990971|ref|ZP_07179421.1| methyltransferase domain protein [Escherichia coli MS 200-1]
gi|110342017|gb|ABG68254.1| probable methyltransferase YafE [Escherichia coli 536]
gi|190908405|gb|EDV67995.1| methyltransferase, UbiE/COQ5 family [Escherichia coli F11]
gi|300305637|gb|EFJ60157.1| methyltransferase domain protein [Escherichia coli MS 200-1]
gi|324011825|gb|EGB81044.1| methyltransferase domain protein [Escherichia coli MS 60-1]
Length = 256
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|124385939|ref|YP_001026264.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei NCTC 10229]
gi|126448408|ref|YP_001080461.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei NCTC 10247]
gi|254358483|ref|ZP_04974756.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei 2002721280]
gi|124293959|gb|ABN03228.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei NCTC 10229]
gi|126241278|gb|ABO04371.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei NCTC 10247]
gi|148027610|gb|EDK85631.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei 2002721280]
Length = 408
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLRAPDAVFVGGGVSR 328
>gi|53719372|ref|YP_108358.1| precorrin-6Y C5,15-methyltransferase [Burkholderia pseudomallei
K96243]
gi|53723440|ref|YP_102845.1| precorrin-6Y C5,15-methyltransferase [Burkholderia mallei ATCC
23344]
gi|67639223|ref|ZP_00438106.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei GB8 horse 4]
gi|126453534|ref|YP_001066234.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1106a]
gi|217421514|ref|ZP_03453018.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 576]
gi|242315777|ref|ZP_04814793.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1106b]
gi|254178166|ref|ZP_04884821.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei ATCC 10399]
gi|254179812|ref|ZP_04886411.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1655]
gi|254188788|ref|ZP_04895299.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei Pasteur 52237]
gi|254199788|ref|ZP_04906154.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei FMH]
gi|254206113|ref|ZP_04912465.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei JHU]
gi|254258326|ref|ZP_04949380.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1710a]
gi|254297654|ref|ZP_04965107.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 406e]
gi|52209786|emb|CAH35757.1| precorrin-6Y C5,15-methyltransferase [decarboxylating]
[Burkholderia pseudomallei K96243]
gi|52426863|gb|AAU47456.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei ATCC 23344]
gi|126227176|gb|ABN90716.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1106a]
gi|147749384|gb|EDK56458.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei FMH]
gi|147753556|gb|EDK60621.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei JHU]
gi|157807688|gb|EDO84858.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 406e]
gi|157936467|gb|EDO92137.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei Pasteur 52237]
gi|160699205|gb|EDP89175.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei ATCC 10399]
gi|184210352|gb|EDU07395.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1655]
gi|217395256|gb|EEC35274.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 576]
gi|238519763|gb|EEP83230.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia mallei GB8 horse 4]
gi|242139016|gb|EES25418.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1106b]
gi|254217015|gb|EET06399.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia pseudomallei 1710a]
Length = 408
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI S IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPSCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLRAPDAVFVGGGVSR 328
>gi|34762998|ref|ZP_00143975.1| Precorrin-8W decarboxylase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887342|gb|EAA24435.1| Precorrin-8W decarboxylase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 189
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P SI ID+G+G G GI + + G V IE + K +R +K
Sbjct: 23 ISIAKLMLKPNSILIDVGAGTGTIGIEAATYMPQ---GKVYAIEKEEKGLDTIRLNAEKF 79
Query: 122 AARG-KVFACRI 132
++ +
Sbjct: 80 KLDNFELIHGKA 91
>gi|85086879|ref|XP_957775.1| hypothetical protein NCU00304 [Neurospora crassa OR74A]
gi|28918870|gb|EAA28539.1| predicted protein [Neurospora crassa OR74A]
Length = 386
Score = 34.3 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 21/70 (30%)
Query: 47 SSSTVEDFW----IRHVEDSLRVF---------------QLHPYPSIWIDLGSGGGFPGI 87
+ + + ++W +H DSL ++ L ID+G+G GF I
Sbjct: 105 AVTDI-EYWAPNDEKH-LDSLEIYYHGVELLNDHQLHMSPLKDNIERVIDIGTGAGFWAI 162
Query: 88 ITSIQLSSIE 97
+ + + E
Sbjct: 163 DFADKYPNCE 172
>gi|239940188|ref|ZP_04692125.1| hypothetical protein SrosN15_04265 [Streptomyces roseosporus NRRL
15998]
Length = 505
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG G G ++ + +G V ++ + A R + +V
Sbjct: 53 VLDLGCGTGSLSLLAA-----GQGHRVTAVDRSPRMAEKAR--AKLAGTGAEVLVGDAAR 105
Query: 135 APQMITTCDVISAR 148
P DV+ AR
Sbjct: 106 PPVGERAFDVVVAR 119
>gi|224542341|ref|ZP_03682880.1| hypothetical protein CATMIT_01520 [Catenibacterium mitsuokai DSM
15897]
gi|224524723|gb|EEF93828.1| hypothetical protein CATMIT_01520 [Catenibacterium mitsuokai DSM
15897]
Length = 197
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 29/82 (35%), Gaps = 10/82 (12%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACR 131
+D+G G G I + + ++++ + + ++ V+
Sbjct: 59 KSVLDVGCGYGALSISLKMVYPDV---TFDMVDVNRRAMDLAKRTIEDYHLEDMHVYESN 115
Query: 132 IQEAPQMITTCDVISA----RA 149
+ Q+ T D+I + RA
Sbjct: 116 AYD--QVEKTFDMIISNPPIRA 135
>gi|115474003|ref|NP_001060600.1| Os07g0671700 [Oryza sativa Japonica Group]
gi|75327184|sp|Q7XI75|CARM1_ORYSJ RecName: Full=Probable histone-arginine methyltransferase CARM1;
AltName: Full=Protein arginine N-methyltransferase 4
gi|152013377|sp|A2YPT7|CARM1_ORYSI RecName: Full=Probable histone-arginine methyltransferase CARM1;
AltName: Full=Protein arginine N-methyltransferase 4
gi|33146849|dbj|BAC79844.1| putative protein arginine N-methyltransferase 4 [Oryza sativa
Japonica Group]
gi|113612136|dbj|BAF22514.1| Os07g0671700 [Oryza sativa Japonica Group]
gi|215686958|dbj|BAG89761.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200237|gb|EEC82664.1| hypothetical protein OsI_27289 [Oryza sativa Indica Group]
gi|222637662|gb|EEE67794.1| hypothetical protein OsJ_25531 [Oryza sativa Japonica Group]
Length = 528
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--KTAARGKVF 128
+ +D+G+G G I S+ + V +E+ R + R V
Sbjct: 191 EGRVVVDVGAGSG----ILSLFAAQAGARHVYAVEASEMAEHAQRLISGNPSLGQRITVI 246
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
+++E ++ D++ + + TLL
Sbjct: 247 KGKVEEV-ELPEKADILIS---EPMGTLL 271
>gi|326517788|dbj|BAK03812.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 348
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY-------VVQKTAAR 124
++LG+G G G++ + +S G V + + + +++ +T +
Sbjct: 169 SKRVLELGAGYGLAGLVIA---ASANAGEVIISDGNPQVVGYIQQNMSINAKTFGQTKVK 225
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
++A M+ + D+I A
Sbjct: 226 PMTLHWDQEQASDMLNSFDIIVA 248
>gi|325271491|ref|ZP_08138009.1| biotin biosynthesis protein BioC [Pseudomonas sp. TJI-51]
gi|324103381|gb|EGC00710.1| biotin biosynthesis protein BioC [Pseudomonas sp. TJI-51]
Length = 272
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 12/90 (13%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
P W+DLGSG G I + + + G V++ E LR+ + A
Sbjct: 53 QPLRWLDLGSGTGHFSRILAERFAQSSGVAVDIAEGM------LRHARNEQRGAHYHVAG 106
Query: 131 RIQEAPQMITTCDVISARALADLDTLLEYS 160
+ P + D++ L ++
Sbjct: 107 DAERLPLRDASVDLV----FTSLAV--QWC 130
>gi|313203843|ref|YP_004042500.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific
[Paludibacter propionicigenes WB4]
gi|312443159|gb|ADQ79515.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Paludibacter propionicigenes WB4]
Length = 282
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G+G G I + + V+ + + + R V++ I
Sbjct: 115 ILDIGTGSGCIAISLKHEFPN---ASVHAFDISEQALNTARSNVERNKLDVTFSRTNILN 171
Query: 135 APQMITTCDVISA 147
AP+ D+I +
Sbjct: 172 APKTEQRWDIIVS 184
>gi|239618179|ref|YP_002941501.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1]
gi|239507010|gb|ACR80497.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1]
Length = 264
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
Query: 60 EDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DS + L + ID+G+G G I+ + + V +E S+LR
Sbjct: 112 WDSNELLSLVDFSGKTVIDVGAGTGRLTIVAA-----EKAKTVFAVEPVANLRSYLRKKA 166
Query: 119 QKTAARGK-VFACRIQEAPQMITTCDV 144
++ V I+E P DV
Sbjct: 167 KEKGLTNIYVVDGLIEEIPFPDQFADV 193
>gi|209917397|ref|YP_002291481.1| putative biotin synthesis protein [Escherichia coli SE11]
gi|300823394|ref|ZP_07103524.1| methyltransferase domain protein [Escherichia coli MS 119-7]
gi|331666451|ref|ZP_08367331.1| putative biotin synthesis protein [Escherichia coli TA271]
gi|331675868|ref|ZP_08376585.1| putative biotin synthesis protein [Escherichia coli H591]
gi|209910656|dbj|BAG75730.1| putative biotin synthesis protein [Escherichia coli SE11]
gi|300524012|gb|EFK45081.1| methyltransferase domain protein [Escherichia coli MS 119-7]
gi|331066296|gb|EGI38174.1| putative biotin synthesis protein [Escherichia coli TA271]
gi|331076428|gb|EGI47705.1| putative biotin synthesis protein [Escherichia coli H591]
Length = 256
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEVRQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|118616993|ref|YP_905325.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
gi|118569103|gb|ABL03854.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
Length = 356
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 27/99 (27%), Gaps = 13/99 (13%)
Query: 59 VEDSLRVFQLHP----------YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
V DS V + P + D G G G + + ++ E
Sbjct: 152 VFDSALVDVIVPLVESLPERLQAGAEVADFGCGSGHAVNLLAQAFPKSRFTGIDFSEP-- 209
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ Q+ F R + DVI+A
Sbjct: 210 -AIAAASQEAQRRGLSNATFQSRDLTTLDDVGVYDVITA 247
>gi|75910103|ref|YP_324399.1| Mg-protoporphyrin IX methyl transferase [Anabaena variabilis ATCC
29413]
gi|75703828|gb|ABA23504.1| Magnesium protoporphyrin O-methyltransferase [Anabaena variabilis
ATCC 29413]
Length = 228
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 10/86 (11%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D G G G I + EG V + K + +T + +Q
Sbjct: 63 SICDAGCGVGSLSIPLA-----TEGAKVYASDISEKMVEEGKQRALETLGNAENPTFAVQ 117
Query: 134 EAPQMITTCDVISARALADLDTLLEY 159
+ + + + LD L+ Y
Sbjct: 118 DLESLSGSYHTVIC-----LDVLIHY 138
>gi|17230693|ref|NP_487241.1| Mg-protoporphyrin IX methyl transferase [Nostoc sp. PCC 7120]
gi|17132296|dbj|BAB74900.1| Mg-protoporphyrin IX methyl transferase [Nostoc sp. PCC 7120]
Length = 228
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 10/86 (11%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D G G G I + EG V + K + +T + +Q
Sbjct: 63 SICDAGCGVGSLSIPLA-----TEGAKVYASDISEKMVEEGKQRALETLGNAENPTFAVQ 117
Query: 134 EAPQMITTCDVISARALADLDTLLEY 159
+ + + + LD L+ Y
Sbjct: 118 DLESLSGSYHTVIC-----LDVLIHY 138
>gi|77406523|ref|ZP_00783575.1| tellurite resistance protein TehB [Streptococcus agalactiae H36B]
gi|77411377|ref|ZP_00787724.1| tellurite resistance protein TehB [Streptococcus agalactiae CJB111]
gi|77162550|gb|EAO73514.1| tellurite resistance protein TehB [Streptococcus agalactiae CJB111]
gi|77174862|gb|EAO77679.1| tellurite resistance protein TehB [Streptococcus agalactiae H36B]
Length = 291
Score = 34.3 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK L T + + L S +DLG G G + S+ G
Sbjct: 103 KKYGLT--RTHSEV--------IASAPLLSEKSNILDLGCGQGRNSLYLSLL-----GHQ 147
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++S + L + + + I A + D I +
Sbjct: 148 VTSVDSNGQSLVALENMALEEELPYNIKWYDINTA-TIEGHYDFILS 193
>gi|332670095|ref|YP_004453103.1| methyltransferase small [Cellulomonas fimi ATCC 484]
gi|332339133|gb|AEE45716.1| methyltransferase small [Cellulomonas fimi ATCC 484]
Length = 203
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR P +DLG G G + +++ V ++ + +R
Sbjct: 52 LRTAPPAPAQGDLLDLGCGWGPVALSLALESPDAR---VWAVDVNERALDLVRRNAAALG 108
Query: 123 ARGKVFA 129
V A
Sbjct: 109 LANVVAA 115
>gi|322385392|ref|ZP_08059037.1| methyltransferase domain protein [Streptococcus cristatus ATCC
51100]
gi|321270651|gb|EFX53566.1| methyltransferase domain protein [Streptococcus cristatus ATCC
51100]
Length = 195
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G G G G+ + + V L++ + R
Sbjct: 50 LSALEFNK-KETLLDVGCGYGTLGLTLA----KAQELEVTLVDINQRALDLARKNADANQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + Q+ I + RA
Sbjct: 105 VSADIFQSNV--YEQVAGQFHHIISNPPIRA 133
>gi|294794936|ref|ZP_06760071.1| cyclopropane-fatty-acyl-phospholipid synthase [Veillonella sp.
3_1_44]
gi|294454298|gb|EFG22672.1| cyclopropane-fatty-acyl-phospholipid synthase [Veillonella sp.
3_1_44]
Length = 390
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L + +D+G G GF I + + ++G L E + KK +
Sbjct: 155 VHHILDKLYL----KEGMTLLDIGCGWGFLLIEAARKY-GVKGYGCTLSEEQWKKG---Q 206
Query: 116 YVVQKTAARGKVFACRI--QEAPQMITTCDVISA 147
+++ G+V I ++ T D I +
Sbjct: 207 ERIKEYGLEGQVEIELIDYRDVAASGRTFDRIVS 240
>gi|302882047|ref|XP_003039934.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256720801|gb|EEU34221.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 314
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Query: 55 WIRHVE----D-SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ H+ D SL + + +P +DLG+G G I + S E +L
Sbjct: 58 LVHHIYSLILDGSLYLAPIGDHPQRVLDLGTGTGIWAIDFADDFPSAEVLGTDL 111
>gi|160943353|ref|ZP_02090588.1| hypothetical protein FAEPRAM212_00839 [Faecalibacterium prausnitzii
M21/2]
gi|158445379|gb|EDP22382.1| hypothetical protein FAEPRAM212_00839 [Faecalibacterium prausnitzii
M21/2]
Length = 203
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR Q P ++ +D G GGG + + ++ +KA + A
Sbjct: 34 LRFLQPAP-DAMVLDCGCGGGANIKTLLKLCPNGKVQGIDYSAVSVEKARKVN-ARALAA 91
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
R V + E P DV++A
Sbjct: 92 GRCTVQQASVAELPFEAEQFDVVTA 116
>gi|37523539|ref|NP_926916.1| hypothetical protein glr3970 [Gloeobacter violaceus PCC 7421]
gi|35214543|dbj|BAC91911.1| glr3970 [Gloeobacter violaceus PCC 7421]
Length = 220
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ R V D V L P W+DLG+G ++ + + I V+L
Sbjct: 24 DHGEVNARFVAD---VLALGPADGPWLDLGTGPAHLPVLLASERPDIRITAVDLAAPM-- 78
Query: 110 KASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
+ R V+ G++ + + +
Sbjct: 79 -LAIARRRVEAAGLAGRITLVHGDAKAPALGAARFACVFS 117
>gi|330898840|gb|EGH30259.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 269
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLGSG G+ + + EG +++ E LR+ +
Sbjct: 45 LTRLPAQCKPSRWLDLGSGTGYFSRALAQTFTGSEGIALDIAEGM------LRHA-RPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P +C +I + L ++ +
Sbjct: 98 GAQHFIAGDAEHLPLRDQSCGLI----FSSLAV--QWCADF 132
>gi|325690372|gb|EGD32376.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK115]
gi|332365729|gb|EGJ43487.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK1059]
Length = 189
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 12/109 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +LH +D+GSG G I + +E V +E + + +Q
Sbjct: 22 SLDKLELH-RAKRMLDVGSGTGSVTIQAARTYPELE---VVAVERNEDAVALTQENIQHF 77
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL----ADLDTLLEYSFPWLYQ 166
+ ++ + D I + ++ + ++ +
Sbjct: 78 GCHNVRLHQGLAPI-ELEGSFDAIF---VGGTGGNMQEIFDWCAQLMEP 122
>gi|312134630|ref|YP_004001968.1| O-methyltransferase family 3 [Caldicellulosiruptor owensensis OL]
gi|311774681|gb|ADQ04168.1| O-methyltransferase family 3 [Caldicellulosiruptor owensensis OL]
Length = 212
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +++G+ GF + I + + IE + +++
Sbjct: 46 LTILSMLKKPKRILEIGTAVGFSALSMHIGFPEAK---IITIEMDFDMVMEAKKNIKEFG 102
Query: 123 A--RGKVFACRIQEAPQMIT-TCDVI 145
A + V +E + I D+I
Sbjct: 103 AQDKIVVVGGEAEEVLEAIEGEFDMI 128
>gi|331681591|ref|ZP_08382227.1| putative biotin synthesis protein [Escherichia coli H299]
gi|315300183|gb|EFU59420.1| methyltransferase domain protein [Escherichia coli MS 16-3]
gi|324009116|gb|EGB78335.1| methyltransferase domain protein [Escherichia coli MS 57-2]
gi|331081165|gb|EGI52327.1| putative biotin synthesis protein [Escherichia coli H299]
Length = 256
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|258592987|emb|CBE69298.1| Putative protein methyltransferase hemK modifies release factors
RF-1 and RF-2 [NC10 bacterium 'Dutch sediment']
Length = 297
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+ +DLG+G G + +++L L+ I+ + +V +
Sbjct: 121 VIVDLGTGCGAVALALAVELP---RALIYAIDRSPGACRIAGRNIDTLGLTNRVRCVQGD 177
Query: 134 EAPQMI-----TTCDVISA 147
CD+I +
Sbjct: 178 LLEPFRTIDAGGGCDLIVS 196
>gi|170723616|ref|YP_001751304.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida W619]
gi|169761619|gb|ACA74935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Pseudomonas putida W619]
Length = 276
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+L P P+ +DLG+G G + + + + + V ++ + + Q+
Sbjct: 100 TALELQPATPAKVLDLGTGTGAIALALASECPAWQ---VTALDRVEEAVALAERNRQRLG 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ D+I +
Sbjct: 157 LGNVKVLASHWFSALDGERFDLILS 181
>gi|73749167|ref|YP_308406.1| hypothetical protein cbdb_A1465 [Dehalococcoides sp. CBDB1]
gi|289433141|ref|YP_003463014.1| methyltransferase type 12 [Dehalococcoides sp. GT]
gi|73660883|emb|CAI83490.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
gi|288946861|gb|ADC74558.1| Methyltransferase type 12 [Dehalococcoides sp. GT]
Length = 273
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAA 123
+ + +D+G+G G I + +G V IE +++ L ++ + A
Sbjct: 61 IIGITRGGESLLDIGAGAGSFAIPLA-----KQGVKVTAIEPSPRQSGLLMAEIEKELLA 115
Query: 124 RGKVFACRIQE-APQMITTCDVISA 147
++ + +E P+ I D + A
Sbjct: 116 NIRLVSQPWEELLPEEIGCHDHVMA 140
>gi|315104022|gb|EFT75998.1| methyltransferase small domain protein [Propionibacterium acnes
HL050PA2]
Length = 206
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P ++DLG G G + L+ G + ++ + + +V
Sbjct: 65 PSNGTFLDLGCGYG----PIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVH 120
Query: 129 ACRIQEAPQMITTCDVISA 147
ACR +E D I +
Sbjct: 121 ACRPEEV-DPDLRFDEIWS 138
>gi|314988719|gb|EFT32810.1| methyltransferase small domain protein [Propionibacterium acnes
HL005PA3]
Length = 206
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P ++DLG G G + L+ G + ++ + + +V
Sbjct: 65 PSNGTFLDLGCGYG----PIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVH 120
Query: 129 ACRIQEAPQMITTCDVISA 147
ACR +E D I +
Sbjct: 121 ACRPEEV-DPDLRFDEIWS 138
>gi|313817969|gb|EFS55683.1| methyltransferase small domain protein [Propionibacterium acnes
HL046PA2]
gi|314960818|gb|EFT04919.1| methyltransferase small domain protein [Propionibacterium acnes
HL002PA2]
gi|315086880|gb|EFT58856.1| methyltransferase small domain protein [Propionibacterium acnes
HL002PA3]
Length = 206
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P ++DLG G G + L+ G + ++ + + +V
Sbjct: 65 PSNGTFLDLGCGYG----PIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVH 120
Query: 129 ACRIQEAPQMITTCDVISA 147
ACR +E D I +
Sbjct: 121 ACRPEEV-DPDLRFDEIWS 138
>gi|289427618|ref|ZP_06429330.1| methyltransferase small domain protein [Propionibacterium acnes
J165]
gi|289159109|gb|EFD07301.1| methyltransferase small domain protein [Propionibacterium acnes
J165]
gi|313808788|gb|EFS47242.1| methyltransferase small domain protein [Propionibacterium acnes
HL087PA2]
gi|313819880|gb|EFS57594.1| methyltransferase small domain protein [Propionibacterium acnes
HL036PA1]
gi|313823372|gb|EFS61086.1| methyltransferase small domain protein [Propionibacterium acnes
HL036PA2]
gi|313824844|gb|EFS62558.1| methyltransferase small domain protein [Propionibacterium acnes
HL063PA1]
gi|314925808|gb|EFS89639.1| methyltransferase small domain protein [Propionibacterium acnes
HL036PA3]
gi|314979789|gb|EFT23883.1| methyltransferase small domain protein [Propionibacterium acnes
HL072PA2]
gi|314986105|gb|EFT30197.1| methyltransferase small domain protein [Propionibacterium acnes
HL005PA2]
gi|315083347|gb|EFT55323.1| methyltransferase small domain protein [Propionibacterium acnes
HL027PA2]
gi|315089971|gb|EFT61947.1| methyltransferase small domain protein [Propionibacterium acnes
HL072PA1]
gi|327325122|gb|EGE66928.1| putative methyltransferase small domain protein [Propionibacterium
acnes HL096PA3]
gi|327449323|gb|EGE95977.1| methyltransferase small domain protein [Propionibacterium acnes
HL013PA2]
gi|328756333|gb|EGF69949.1| methyltransferase small domain protein [Propionibacterium acnes
HL020PA1]
gi|332676208|gb|AEE73024.1| methylase-like protein [Propionibacterium acnes 266]
Length = 206
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P ++DLG G G + L+ G + ++ + + +V
Sbjct: 65 PSNGTFLDLGCGYG----PIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVH 120
Query: 129 ACRIQEAPQMITTCDVISA 147
ACR +E D I +
Sbjct: 121 ACRPEEV-DPDLRFDEIWS 138
>gi|258405077|ref|YP_003197819.1| arsenite S-adenosylmethyltransferase [Desulfohalobium retbaense DSM
5692]
gi|257797304|gb|ACV68241.1| Methyltransferase type 11 [Desulfohalobium retbaense DSM 5692]
Length = 265
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +DLGSGGGF + + + E G V ++ S R ++
Sbjct: 72 QAIGALQAGETVLDLGSGGGFDSFLAA--RAVGETGRVIGVDMTPDMLSKARANAEQGGY 129
Query: 124 RGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P + DVI +
Sbjct: 130 ANVEFRLGEIEHLPVADASVDVILS 154
>gi|256371293|ref|YP_003109117.1| Methyltransferase type 11 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007877|gb|ACU53444.1| Methyltransferase type 11 [Acidimicrobium ferrooxidans DSM 10331]
Length = 235
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG G G + + + G + S+ A L A A ++
Sbjct: 50 VVDLGCGSGQVSLPAAAIAHHVHGVDI----SERMVARLLERARAANLANVTAEATPLER 105
Query: 135 APQMITTCDVISA 147
+ DV+ +
Sbjct: 106 FALEPRSVDVVVS 118
>gi|227890128|ref|ZP_04007933.1| ribosomal protein L11 methyltransferase [Lactobacillus johnsonii
ATCC 33200]
gi|227849303|gb|EEJ59389.1| ribosomal protein L11 methyltransferase [Lactobacillus johnsonii
ATCC 33200]
Length = 315
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G I +I S + V + ++ + + +
Sbjct: 169 LAMERALVKPMSVLDVGTGSG----ILAIAASKLGASHVLGTDISDEAVTAAKENIALNN 224
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D+I A LA D LLE
Sbjct: 225 IDNIDVR-KANLLKDINEKYDLIVANILA--DILLEL 258
>gi|282855154|ref|ZP_06264486.1| methyltransferase small domain protein [Propionibacterium acnes
J139]
gi|295131338|ref|YP_003582001.1| methyltransferase small domain protein [Propionibacterium acnes
SK137]
gi|282581742|gb|EFB87127.1| methyltransferase small domain protein [Propionibacterium acnes
J139]
gi|291376428|gb|ADE00283.1| methyltransferase small domain protein [Propionibacterium acnes
SK137]
gi|313773225|gb|EFS39191.1| methyltransferase small domain protein [Propionibacterium acnes
HL074PA1]
gi|313810418|gb|EFS48132.1| methyltransferase small domain protein [Propionibacterium acnes
HL083PA1]
gi|313812248|gb|EFS49962.1| methyltransferase small domain protein [Propionibacterium acnes
HL025PA1]
gi|313830086|gb|EFS67800.1| methyltransferase small domain protein [Propionibacterium acnes
HL007PA1]
gi|313832642|gb|EFS70356.1| methyltransferase small domain protein [Propionibacterium acnes
HL056PA1]
gi|314924130|gb|EFS87961.1| methyltransferase small domain protein [Propionibacterium acnes
HL001PA1]
gi|314964971|gb|EFT09070.1| methyltransferase small domain protein [Propionibacterium acnes
HL082PA2]
gi|314973065|gb|EFT17161.1| methyltransferase small domain protein [Propionibacterium acnes
HL053PA1]
gi|314975561|gb|EFT19656.1| methyltransferase small domain protein [Propionibacterium acnes
HL045PA1]
gi|314982234|gb|EFT26327.1| methyltransferase small domain protein [Propionibacterium acnes
HL110PA3]
gi|314984845|gb|EFT28937.1| methyltransferase small domain protein [Propionibacterium acnes
HL005PA1]
gi|315079904|gb|EFT51880.1| methyltransferase small domain protein [Propionibacterium acnes
HL078PA1]
gi|315090494|gb|EFT62470.1| methyltransferase small domain protein [Propionibacterium acnes
HL110PA4]
gi|315093730|gb|EFT65706.1| methyltransferase small domain protein [Propionibacterium acnes
HL060PA1]
gi|315096708|gb|EFT68684.1| methyltransferase small domain protein [Propionibacterium acnes
HL038PA1]
gi|327325249|gb|EGE67054.1| putative methyltransferase small domain protein [Propionibacterium
acnes HL096PA2]
gi|327325549|gb|EGE67348.1| putative methyltransferase small domain protein [Propionibacterium
acnes HL103PA1]
gi|327444050|gb|EGE90704.1| methyltransferase small domain protein [Propionibacterium acnes
HL043PA1]
gi|327449449|gb|EGE96103.1| methyltransferase small domain protein [Propionibacterium acnes
HL043PA2]
gi|328761334|gb|EGF74861.1| putative methyltransferase small domain protein [Propionibacterium
acnes HL099PA1]
Length = 206
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P ++DLG G G + L+ G + ++ + + +V
Sbjct: 65 PSNGTFLDLGCGYG----PIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVH 120
Query: 129 ACRIQEAPQMITTCDVISA 147
ACR +E D I +
Sbjct: 121 ACRPEEV-DPDLRFDEIWS 138
>gi|161527618|ref|YP_001581444.1| methyltransferase type 12 [Nitrosopumilus maritimus SCM1]
gi|160338919|gb|ABX12006.1| Methyltransferase type 12 [Nitrosopumilus maritimus SCM1]
Length = 306
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 9/85 (10%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S + L +LGSG GF ++ G V +E K +F ++ +
Sbjct: 112 SWYLLPLLKKKHSLFELGSGEGFI-----LEFFEKNGFDVFGMEPS--KINF--SLINRK 162
Query: 122 AARGKVFACRIQEAPQMITTCDVIS 146
GK + + DVI
Sbjct: 163 LTYGKCVTGSADDIKSIKKKFDVII 187
>gi|119510422|ref|ZP_01629556.1| UbiE/COQ5 methyltransferase [Nodularia spumigena CCY9414]
gi|119464951|gb|EAW45854.1| UbiE/COQ5 methyltransferase [Nodularia spumigena CCY9414]
Length = 305
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 9/98 (9%)
Query: 51 VEDFWIRH-VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
+ +R + D+++V P +DLG G G + E ++L
Sbjct: 84 PNETVVRQALIDAIKV-----KPRRILDLGCGTGSTTLKLKQAFPQAEVIGLDLSPYMLV 138
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+A + + D+++A
Sbjct: 139 RA---EDKARNAGLDIHWEHGNAETTNFPEAHFDLVTA 173
>gi|115374860|ref|ZP_01462134.1| metalloid methyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|310817630|ref|YP_003949988.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|115368169|gb|EAU67130.1| metalloid methyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|309390702|gb|ADO68161.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
Length = 282
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P +D+ +G G P + + ++L+E A R ++
Sbjct: 39 LALAGLAP-GMRVLDIAAGRGEPALPAAHRVGPQGWVLGIDLVEGMLHIA---RERARRE 94
Query: 122 AARGKVF-ACRIQEAPQMITTCDVISAR 148
F A + T DV + R
Sbjct: 95 GLNNVEFRAADAESFQAGETLFDVATVR 122
>gi|115352521|ref|YP_774360.1| type 11 methyltransferase [Burkholderia ambifaria AMMD]
gi|115282509|gb|ABI88026.1| Methyltransferase type 11 [Burkholderia ambifaria AMMD]
Length = 250
Score = 34.3 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 21/78 (26%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+DLG G G + V + + + ++ +
Sbjct: 42 DGAVLDLGCGAGHASFAVA-----PHVRDVVAYDLAAPMLATVDAAARERGLVNIRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P T D + +R
Sbjct: 97 PAERLPFDAGTFDWVVSR 114
>gi|295108671|emb|CBL22624.1| Methylase involved in ubiquinone/menaquinone biosynthesis
[Ruminococcus obeum A2-162]
Length = 271
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 3/82 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL---RYVVQKTAARG 125
+ +++G G G I ++ + V+ + + L + A+
Sbjct: 101 YDGEGKILEVGCGSGALTIRAALTWPKAQVIGVDYWGAVYNYSKALCEKNAASEGVASHC 160
Query: 126 KVFACRIQEAPQMITTCDVISA 147
++ + DV+ +
Sbjct: 161 VFQHGDAKQLDFPDESFDVVIS 182
>gi|256020176|ref|ZP_05434041.1| putative biotin synthesis protein [Shigella sp. D9]
gi|307314700|ref|ZP_07594298.1| Methyltransferase type 11 [Escherichia coli W]
gi|332281339|ref|ZP_08393752.1| methyltransferase [Shigella sp. D9]
gi|306905819|gb|EFN36344.1| Methyltransferase type 11 [Escherichia coli W]
gi|315059423|gb|ADT73750.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli W]
gi|323380018|gb|ADX52286.1| Methyltransferase type 11 [Escherichia coli KO11]
gi|332103691|gb|EGJ07037.1| methyltransferase [Shigella sp. D9]
Length = 256
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEVRQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|242046882|ref|XP_002461187.1| hypothetical protein SORBIDRAFT_02g042540 [Sorghum bicolor]
gi|241924564|gb|EER97708.1| hypothetical protein SORBIDRAFT_02g042540 [Sorghum bicolor]
Length = 555
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--KTAARGKVF 128
I +D+G+G G I S+ + V +E+ R + R V
Sbjct: 203 EGRIVVDVGAGSG----ILSLFAAQAGARHVYAVEASEMAEHAQRLISGNPSLGQRITVI 258
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
+++E ++ D++ + + TLL
Sbjct: 259 KGKVEEV-ELPEKADILIS---EPMGTLL 283
>gi|330813120|ref|YP_004357359.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Pelagibacter
sp. IMCC9063]
gi|327486215|gb|AEA80620.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Pelagibacter
sp. IMCC9063]
Length = 242
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 10/91 (10%)
Query: 58 HVEDSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
H SL + + + + +D+G GGG + G V I++ +
Sbjct: 49 HF--SLSLDKNFSFSNLTLLDIGCGGGLLCEPFARL-----GAQVTGIDASKNNIEVAKI 101
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
QKT + + +E DVI
Sbjct: 102 HAQKTNLQIQYLNKLPEEIKNK--KFDVILC 130
>gi|324993041|gb|EGC24961.1| methyltransferase domain protein [Streptococcus sanguinis SK405]
gi|324995650|gb|EGC27562.1| methyltransferase domain protein [Streptococcus sanguinis SK678]
gi|327461309|gb|EGF07640.1| methyltransferase domain protein [Streptococcus sanguinis SK1]
gi|327473947|gb|EGF19360.1| methyltransferase domain protein [Streptococcus sanguinis SK408]
Length = 195
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ +G +++ + + ++
Sbjct: 50 LSVLDF-EAGEQVLDVGCGYG----PLGLTLAKAQGVTATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D I + RA
Sbjct: 105 ISADIFQSNV--YEKVSGIFDHIISNPPIRA 133
>gi|324020678|gb|EGB89897.1| methyltransferase domain protein [Escherichia coli MS 117-3]
Length = 256
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEVRQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|240102561|ref|YP_002958870.1| Methylase, putative, hemK and PrmA related [Thermococcus
gammatolerans EJ3]
gi|239910115|gb|ACS33006.1| Methylase, putative, hemK and PrmA related [Thermococcus
gammatolerans EJ3]
Length = 195
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
I +D+G+G G ++ + + V ++ K R + F R
Sbjct: 36 GEIALDVGTGTGLIALLMA-----RKAKYVLGVDVNPKAVELARRNARLNGISNVEF--R 88
Query: 132 IQE-APQMITTCDVIS 146
+ + + DVI+
Sbjct: 89 LSDLFENVSGRFDVIT 104
>gi|157364417|ref|YP_001471184.1| methyltransferase type 11 [Thermotoga lettingae TMO]
gi|157315021|gb|ABV34120.1| Methyltransferase type 11 [Thermotoga lettingae TMO]
Length = 257
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L DLG G G ++ + G + ++ L +K
Sbjct: 38 LSFIDNISSELRIADLGCGTGGQTMVLA----QNTKGTIIGLDISPDFIEKLNKNAEKLG 93
Query: 123 ARGKV--FACRIQEAPQMITTCDVISA 147
+ +V + P D+I +
Sbjct: 94 LQNRVKGIVGSMDNLPFQKEEFDIIWS 120
>gi|52549930|gb|AAU83779.1| phosphoethanolamine methyltransferase [uncultured archaeon
GZfos33H6]
Length = 183
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+DLG G G +I LS G V ++ ++ ++ ++
Sbjct: 25 EEKRKILDLGCGSG----KLAIYLSEETGYDVTGVDPSRERI----EKAREKSSSVTFEV 76
Query: 130 CRIQEAPQMITTCDVISA 147
+E +T DV+ +
Sbjct: 77 QPAEETAFADSTFDVVVS 94
>gi|238793975|ref|ZP_04637594.1| Methyltransferase type 11 [Yersinia intermedia ATCC 29909]
gi|238726742|gb|EEQ18277.1| Methyltransferase type 11 [Yersinia intermedia ATCC 29909]
Length = 256
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG G G + + S V + + + V
Sbjct: 46 DARLLDLGCGAGHASFTAAAVVKS-----VVSYDLSAQMLQVVSQAAMDKKLTNIDVQQG 100
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D++ +R
Sbjct: 101 LAESLPFDDQSFDIVISR 118
>gi|95930615|ref|ZP_01313349.1| Methyltransferase type 11 [Desulfuromonas acetoxidans DSM 684]
gi|95133267|gb|EAT14932.1| Methyltransferase type 11 [Desulfuromonas acetoxidans DSM 684]
Length = 264
Score = 34.3 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLV--NLIESKNKKASFLRYVVQKTAARGKVFA-C 130
+D+ +GGG +I + + + + N++E+ K +V + F
Sbjct: 47 KVLDVATGGGHTALILAPYVQQVIAVDLTPNMVETAKK------FVCDEKGQTNVTFQLA 100
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + D+++ R
Sbjct: 101 DAENLPFEDGSFDLVTCR 118
>gi|332285703|ref|YP_004417614.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
gi|330429656|gb|AEC20990.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
Length = 285
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+DLG+G G I ++ + G + + + R Q AR + +
Sbjct: 119 RVLDLGTGAGAIAISIAL---NASGASIAATDVSMDALAVARQNAQALGARVEFLSGSWY 175
Query: 134 EAPQMITTCDVISA 147
+A + D+I +
Sbjct: 176 DALVGHSGFDLIVS 189
>gi|331697235|ref|YP_004333474.1| Fmu (Sun) domain-containing protein [Pseudonocardia dioxanivorans
CB1190]
gi|326951924|gb|AEA25621.1| Fmu (Sun) domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 482
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
W+DL +G G ++ ++ ++GG + +E +A +R V V
Sbjct: 291 DDGGRWLDLCAGPGGKAVLLGGLVA-LDGGALAAVERSEHRADLVRRAVD--GLPVTVHT 347
Query: 130 CRIQEAPQMITTCDVI 145
+EAP D +
Sbjct: 348 ADGREAPLPDAAFDRV 363
>gi|313807234|gb|EFS45721.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
Length = 408
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 290 ILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG-RLETTDIDPLVDLRRDRVAGLALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSDTFTARRFRSPLEQAEEHE--------RAVAELDD-AGWA 382
>gi|313146137|ref|ZP_07808330.1| arsenite S-adenosylmethyltransferase [Bacteroides fragilis 3_1_12]
gi|313134904|gb|EFR52264.1| arsenite S-adenosylmethyltransferase [Bacteroides fragilis 3_1_12]
Length = 283
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTA-ARGK 126
+DLGSG G I + + E G V I+ + + R K +
Sbjct: 86 ISEGDTVVDLGSGAGNDCF---IARAEVGESGKVIGIDFSPQMITKARNNALKRGYVNVE 142
Query: 127 VFACRIQEAPQMITTCDVISA 147
I+ P + T DV+ +
Sbjct: 143 FLEGDIENMPLLDNTADVVVS 163
>gi|281177430|dbj|BAI53760.1| putative biotin synthesis protein [Escherichia coli SE15]
Length = 256
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|302915304|ref|XP_003051463.1| hypothetical protein NECHADRAFT_104598 [Nectria haematococca mpVI
77-13-4]
gi|256732401|gb|EEU45750.1| hypothetical protein NECHADRAFT_104598 [Nectria haematococca mpVI
77-13-4]
Length = 338
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 24/86 (27%), Gaps = 10/86 (11%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L L +D G G G I + + E V+L +
Sbjct: 91 LHAAPLTQPLRRVLDAGCGTGIWAIDFADEHPECEVTGVDLSPIQP----------SAVP 140
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR 148
F +++ T D I +R
Sbjct: 141 PNVSFFVDDLEDVWDYSTKFDFIFSR 166
>gi|255008414|ref|ZP_05280540.1| arsenite S-adenosylmethyltransferase [Bacteroides fragilis 3_1_12]
Length = 276
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSI-EGGLVNLIESKNKKASFLRYVVQKTA-ARGK 126
+DLGSG G I + + E G V I+ + + R K +
Sbjct: 79 ISEGDTVVDLGSGAGNDCF---IARAEVGESGKVIGIDFSPQMITKARNNALKRGYVNVE 135
Query: 127 VFACRIQEAPQMITTCDVISA 147
I+ P + T DV+ +
Sbjct: 136 FLEGDIENMPLLDNTADVVVS 156
>gi|229587150|ref|YP_002845651.1| Putative methyltransferase [Rickettsia africae ESF-5]
gi|228022200|gb|ACP53908.1| Putative methyltransferase [Rickettsia africae ESF-5]
Length = 554
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 21/78 (26%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ ++LG G I ++ I+ + V+ + +
Sbjct: 72 ENAKILELGCAAGGNLIPHAVLYPK---AYFVGIDLSKVQIDEANKNVKALGLKNIEFHH 128
Query: 130 CRIQEAPQMITTCDVISA 147
C I + D I
Sbjct: 129 CSITDINDSFGKFDYIIC 146
>gi|157964768|ref|YP_001499592.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia massiliae
MTU5]
gi|157844544|gb|ABV85045.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia massiliae
MTU5]
Length = 289
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + +G V I++ ++ + I+E
Sbjct: 105 ILDVGCGGGLIATPLA-----AQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEE 159
Query: 135 APQMITTCDVISA 147
DV+
Sbjct: 160 LESDKL-YDVVLC 171
>gi|157150169|ref|YP_001450440.1| protoporphyrinogen oxidase [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074963|gb|ABV09646.1| possible protoporphyrinogen oxidase [Streptococcus gordonii str.
Challis substr. CH1]
Length = 276
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 45/151 (29%), Gaps = 29/151 (19%)
Query: 15 LLNTYNVSRETLEKLEYFYFLFLKW---------------SKKIN---LVSSSTVEDFWI 56
L VS+E E+L+ L + K++ L+ E+
Sbjct: 41 LKLRIEVSQEEREQLKAIQKQLLAHKPAQYIIGSSDFNGLNLKVDERVLIPRPETEELVE 100
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
L + + P +D+G+G G + + + + + S
Sbjct: 101 ------LILSENPETPLSVLDIGTGSGAIALALANSRPDWQ---ITASDLSRDALSLAAE 151
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
Q + +A Q D+I++
Sbjct: 152 NAQSCGLNLTLVQSDCLDAIQ--GKFDIIAS 180
>gi|156378558|ref|XP_001631209.1| predicted protein [Nematostella vectensis]
gi|156218245|gb|EDO39146.1| predicted protein [Nematostella vectensis]
Length = 407
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFA 129
+ +D+G G G + + + V +E+ A ++++ + V
Sbjct: 105 DKVVLDVGCGTGILSLFCA---REGKASKVYAVEASE-IAKLTEEIIKQNNLDDKITVIQ 160
Query: 130 CRIQEAPQMITTCDVISA 147
+I+E ++ D+I +
Sbjct: 161 GKIEEV-ELPEKVDIIVS 177
>gi|89052789|ref|YP_508240.1| 3-demethylubiquinone-9 3-methyltransferase [Jannaschia sp. CCS1]
gi|109895672|sp|Q28VP7|UBIG_JANSC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|88862338|gb|ABD53215.1| 3-demethylubiquinone-9 3-methyltransferase [Jannaschia sp. CCS1]
Length = 254
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 20/72 (27%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V ++ + + ++ +
Sbjct: 72 HILDIGCGGGLLAEPMARLGAD-----VVGADAAERNIPVAQVHAAQSGLEIDYRHTTAE 126
Query: 134 EAPQMITTCDVI 145
DV+
Sbjct: 127 AMADAGEQFDVV 138
>gi|57233805|ref|YP_182195.1| hypothetical protein DET1495 [Dehalococcoides ethenogenes 195]
gi|57224253|gb|AAW39310.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195]
Length = 273
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAA 123
+ + +D+G+G G I + +G V IE +++ L ++ + A
Sbjct: 61 IIGITRGGESLLDIGAGAGSFAIPLA-----KQGVKVTAIEPSPRQSGLLMAEIEKELLA 115
Query: 124 RGKVFACRIQE-APQMITTCDVISA 147
++ + +E P+ I D + A
Sbjct: 116 NIRLVSQPWEELLPEEIGCHDHVMA 140
>gi|147669924|ref|YP_001214742.1| methyltransferase type 12 [Dehalococcoides sp. BAV1]
gi|146270872|gb|ABQ17864.1| Methyltransferase type 12 [Dehalococcoides sp. BAV1]
Length = 273
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAA 123
+ + +D+G+G G I + +G V IE +++ L ++ + A
Sbjct: 61 IIGITRGGESLLDIGAGAGSFAIPLA-----KQGVKVTAIEPSPRQSGLLMAEIEKELLA 115
Query: 124 RGKVFACRIQE-APQMITTCDVISA 147
++ + +E P+ I D + A
Sbjct: 116 NIRLVSQPWEELLPEEIGCHDHVMA 140
>gi|116622337|ref|YP_824493.1| type 12 methyltransferase [Candidatus Solibacter usitatus
Ellin6076]
gi|116225499|gb|ABJ84208.1| Methyltransferase type 12 [Candidatus Solibacter usitatus
Ellin6076]
Length = 352
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 18/106 (16%)
Query: 44 NLVSSSTVEDFWIRHVEDSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN 102
NLVS H S+ V + + D+G G G ++ + +
Sbjct: 154 NLVS----------HWIPSIAGVQESLTRGARVADIGCGHGASTLLMAQAFPN---SRFF 200
Query: 103 LIESKNKKASFLRYVVQKTAARGKVF--ACRIQEAPQMITTCDVIS 146
+S R KV R ++ P T D+++
Sbjct: 201 GFDSHAASIEAARERAASKGLSDKVQFAVARAKDFPG--TNYDLVT 244
>gi|323353361|ref|ZP_08087894.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis VMC66]
gi|322121307|gb|EFX93070.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis VMC66]
gi|324993574|gb|EGC25494.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK405]
gi|324995114|gb|EGC27026.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK678]
gi|325693645|gb|EGD35564.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK150]
gi|325696905|gb|EGD38792.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK160]
gi|327461847|gb|EGF08178.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK1]
gi|327473583|gb|EGF19003.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK408]
gi|327489131|gb|EGF20926.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK1058]
gi|332360600|gb|EGJ38410.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK1056]
gi|332363822|gb|EGJ41601.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK355]
Length = 189
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 12/109 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +LH +D+GSG G I + +E V +E + + +Q
Sbjct: 22 SLDKLELH-RAKRMLDVGSGTGSVTIQAARTYPELE---VVAVERNEDAVALTQENIQHF 77
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL----ADLDTLLEYSFPWLYQ 166
+ ++ + D I + ++ + ++ +
Sbjct: 78 GCHNVRLHQGLAPI-ELEGSFDAIF---VGGTGGNMQEIFDWCAQLMEP 122
>gi|319639441|ref|ZP_07994191.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria mucosa C102]
gi|317399336|gb|EFV80007.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria mucosa C102]
Length = 237
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA-SFLRYVVQKTAARGKVFAC 130
+D+G GGG I S ++ V I+ K + + + A
Sbjct: 52 GKRVLDVGCGGG----ILSESMAKRGAEHVTGIDMAEKSLQTAAAHAASQHVANIDYRCI 107
Query: 131 RIQE-APQMITTCDVISA 147
R+++ A + + DV++
Sbjct: 108 RVEDLAAEQPHSFDVVTC 125
>gi|241759138|ref|ZP_04757246.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria flavescens
SK114]
gi|241320557|gb|EER56834.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria flavescens
SK114]
Length = 242
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA-SFLRYVVQKTAARGKVFAC 130
+D+G GGG I S ++ V I+ K + + + A
Sbjct: 57 GKRVLDVGCGGG----ILSESMAKRGAEHVTGIDMAEKSLQTAAAHAASQHVANIDYRCI 112
Query: 131 RIQE-APQMITTCDVISA 147
R+++ A + + DV++
Sbjct: 113 RVEDLAAEQPHSFDVVTC 130
>gi|92114585|ref|YP_574513.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Chromohalobacter salexigens DSM 3043]
gi|91797675|gb|ABE59814.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
[Chromohalobacter salexigens DSM 3043]
Length = 317
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ED + P+ +DL +G G GI T++ L + E LV+ I + V
Sbjct: 131 IEDGFAAWFDQWPPARVLDLCAGSGCIGIATALYLPTAEVDLVD-ISPDALAVAKANIVR 189
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
R + + A DVI +
Sbjct: 190 HDVGHRVRAVTSDLF-AGVAGQRYDVIVS 217
>gi|50842234|ref|YP_055461.1| hypothetical protein PPA0747 [Propionibacterium acnes KPA171202]
gi|50839836|gb|AAT82503.1| conserved protein, DUF58 [Propionibacterium acnes KPA171202]
Length = 380
Score = 34.3 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + L V
Sbjct: 262 ILDALVDEPLRPDTALTKAIESCQGIDGPAIAILG-RLETTDIDPLVDLRRDRVAGLALV 320
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 321 LDSDTFTARRFRSPLEQAEEHE--------RAVAELDD-AGWA 354
>gi|307130278|ref|YP_003882294.1| Ubiquinone biosynthesis SAM-dependent O-methyltransferase [Dickeya
dadantii 3937]
gi|306527807|gb|ADM97737.1| Ubiquinone biosynthesis SAM-dependent O-methyltransferase [Dickeya
dadantii 3937]
Length = 265
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 24/121 (19%)
Query: 39 WSKK---IN------LVS--SSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGI 87
W+K+ N L +D + H P + +D+G+G GF +
Sbjct: 27 WNKRAEGYNDVNVAELAGDKRRLWQDVILHH-------APKKPLLN-ILDVGAGPGFFAV 78
Query: 88 ITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ G V +++ + + A + P DV+
Sbjct: 79 TLAMA-----GHNVTAVDATPGMLAQAKNNADVYGVDINFVASDVHTLPFPDNHFDVLVT 133
Query: 148 R 148
R
Sbjct: 134 R 134
>gi|215485366|ref|YP_002327797.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O127:H6 str. E2348/69]
gi|215263438|emb|CAS07758.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O127:H6 str. E2348/69]
Length = 256
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|149372324|ref|ZP_01891512.1| putative protoporphyrinogen oxidase [unidentified eubacterium
SCB49]
gi|149354714|gb|EDM43277.1| putative protoporphyrinogen oxidase [unidentified eubacterium
SCB49]
Length = 282
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 11/83 (13%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +D+G+G G + + + + ++ E K V Q+ A KV
Sbjct: 112 NEDDKEILDIGTGSGCIAVSLAKEFDKAQVSAYDISEGALK-------VAQENALTNKVE 164
Query: 129 ----ACRIQEAPQMITTCDVISA 147
I ++ + DVI +
Sbjct: 165 VRFKNVDILALDELEQSFDVIVS 187
>gi|148273201|ref|YP_001222762.1| hypothetical protein CMM_2020 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831131|emb|CAN02083.1| unnamed protein product [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 208
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 62 SLRVFQLHPYP---SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
SL + P P +D+G G G + +++ V ++ + + R
Sbjct: 47 SLVLLHNVPEPPAEGHLLDVGCGWGPVALDLAMRSP---AATVWAVDVNERALALTRANA 103
Query: 119 QKTAARGK 126
+
Sbjct: 104 RSLGLENV 111
>gi|116872569|ref|YP_849350.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116741447|emb|CAK20571.1| precorrin-8W decarboxylase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 189
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 4/85 (4%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + L +D+G+G G G+ + IE V IE ++ K
Sbjct: 22 SIDLLGLDETCKKLLDVGAGTGSVGLQVACNFPEIE---VTAIERNPVAVDLIKRNQVKF 78
Query: 122 AARGKVFACRIQEAP-QMITTCDVI 145
D I
Sbjct: 79 GLENVKVIEAYAPIELNENEKFDAI 103
>gi|17562972|ref|NP_504045.1| hypothetical protein R08E5.3 [Caenorhabditis elegans]
gi|1938442|gb|AAB52277.1| Hypothetical protein R08E5.3 [Caenorhabditis elegans]
Length = 365
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 56 IRHV-EDSL------RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+HV D L V +L +D+G GGGF + + Q +++ E
Sbjct: 153 EKHVVADMLPDIGNGVVEKLEAGGVRVLDVGCGGGFHSSLLAEQYPKSHFVGLDIGEDAI 212
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMI-TTCDVI 145
++A + + C + P++ + D++
Sbjct: 213 RQAKQRKTKSGAAFNNLEFIECDAGKMPEIWTDSFDLV 250
>gi|23014693|ref|ZP_00054497.1| COG0500: SAM-dependent methyltransferases [Magnetospirillum
magnetotacticum MS-1]
Length = 286
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G+ + + G V+ ++ + + + V
Sbjct: 66 GQRVLDIGCGPGWLTVQYA-----RGGAQVDSVDLTPRAVELAQAHLALHGQSATVREGN 120
Query: 132 IQEAPQMITTCDVISA 147
+E P D+++A
Sbjct: 121 AEELPFPDDQFDLVAA 136
>gi|328945759|gb|EGG39910.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK1087]
Length = 189
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 12/107 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +LH +D+GSG G I + +E V +E + + +Q
Sbjct: 22 SLDKLELH-RAKRMLDVGSGTGSVTIQAARTYPELE---VVAVERNEDAVALTQENIQHF 77
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL----ADLDTLLEYSFPWL 164
+ ++ + D I + ++ + ++ +
Sbjct: 78 GCHNVRLHQGLAPI-ELDGSFDAIF---VGGTGGNMQEIFDWCAQLM 120
>gi|260853415|ref|YP_003227306.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O26:H11 str. 11368]
gi|260866353|ref|YP_003232755.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O111:H- str. 11128]
gi|257752064|dbj|BAI23566.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O26:H11 str. 11368]
gi|257762709|dbj|BAI34204.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O111:H- str. 11128]
gi|323157955|gb|EFZ44057.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli
EPECa14]
gi|323176522|gb|EFZ62114.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli 1180]
Length = 256
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPGASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEVRQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|227529624|ref|ZP_03959673.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus vaginalis ATCC 49540]
gi|227350414|gb|EEJ40705.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Lactobacillus vaginalis ATCC 49540]
Length = 286
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +DLG+G G GI +++ V L + + +Q+ ++
Sbjct: 113 PLKVLDLGTGSGVIGITLALERPQWN---VTLSDVSPAALMVAQKNMQRFNLNLRLVQSD 169
Query: 132 IQEAPQMITTCDVIS 146
+ A D+I
Sbjct: 170 LF-ANLTNEKYDLIV 183
>gi|226309797|ref|YP_002769691.1| hypothetical protein BBR47_02100 [Brevibacillus brevis NBRC 100599]
gi|226092745|dbj|BAH41187.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 198
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +D+G G G G+ + + G V +I+ + + R + +
Sbjct: 59 ARVLDVGCGYGPMGLTAAKL---ADHGRVTMIDVNERAVNLARRNAEANGIKNVEVRVSD 115
Query: 133 QEAPQMITTCDVI 145
+ DVI
Sbjct: 116 VYSGVQGEQFDVI 128
>gi|170751715|ref|YP_001757975.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
gi|170658237|gb|ACB27292.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
Length = 252
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK--NKKASFLRYVVQKTAARGKVFA 129
D+G+G G G+ + + LV + +A+ + V A
Sbjct: 45 GDRLCDVGAGTGAVGLACAALAPGLRPTLVERDPALAGQARANATLNGIDARVLVADVLA 104
Query: 130 CRIQE--APQMITTCDVI 145
+ A + + DV+
Sbjct: 105 SAAERRAAGLLPDSFDVV 122
>gi|124516552|gb|EAY58060.1| Precorrin-6y C5,15-methyltransferase, CbiT [Leptospirillum rubarum]
Length = 205
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL L P ++W D+G+G G GI + + ++ V IE + L+ V+
Sbjct: 32 SLSRLHLKPGQTLW-DIGAGSGSVGIEAARLVPDLK---VIAIEKDKEDFDCLKTNVETF 87
Query: 122 AARGK--VFACRIQEAPQMITTCDVI 145
+ + EA T +
Sbjct: 88 GVSARFTTIHGKAPEALPEKATAHRV 113
>gi|88602365|ref|YP_502543.1| hypothetical protein Mhun_1075 [Methanospirillum hungatei JF-1]
gi|88187827|gb|ABD40824.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
Length = 250
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL----IESKNKKASFLRYVV 118
L + L P +D+G G G + + S V++ I++ +K +V
Sbjct: 29 LFITDLPPGGGEILDVGCGKGAQTMALARLCQSCRIRAVDIHQPYIDTLEEKI-----IV 83
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + R K + P + D+I A
Sbjct: 84 EGFSGRIKTVCASMDNLPFEEESFDIIWA 112
>gi|26246154|ref|NP_752193.1| hypothetical protein c0247 [Escherichia coli CFT073]
gi|227884789|ref|ZP_04002594.1| methyltransferase YafE [Escherichia coli 83972]
gi|331656200|ref|ZP_08357162.1| putative biotin synthesis protein [Escherichia coli TA206]
gi|26106551|gb|AAN78737.1|AE016755_237 Hypothetical protein yafE [Escherichia coli CFT073]
gi|227838230|gb|EEJ48696.1| methyltransferase YafE [Escherichia coli 83972]
gi|307552057|gb|ADN44832.1| probable methyltransferase YafE [Escherichia coli ABU 83972]
gi|315292136|gb|EFU51488.1| methyltransferase domain protein [Escherichia coli MS 153-1]
gi|331054448|gb|EGI26457.1| putative biotin synthesis protein [Escherichia coli TA206]
Length = 256
Score = 34.3 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|309806665|ref|ZP_07700661.1| methyltransferase small domain protein [Lactobacillus iners LactinV
03V1-b]
gi|308166970|gb|EFO69153.1| methyltransferase small domain protein [Lactobacillus iners LactinV
03V1-b]
Length = 204
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 LKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F+ +I
Sbjct: 111 ---DNVNIFSSDCYRNLDEQEQFGLI 133
>gi|332218543|ref|XP_003258415.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
mitochondrial [Nomascus leucogenys]
Length = 369
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G GGG +S+ ++ ++ K A + R + C
Sbjct: 146 FGMKILDVGCGGGLLTEPLGRLGASV--IGIDPVDENIKTAQCHKSFDPVLDKRIEYRVC 203
Query: 131 RIQE-APQMITTCDVISA 147
++E + T D + A
Sbjct: 204 SLEEIVEETAETFDAVVA 221
>gi|297291400|ref|XP_002808440.1| PREDICTED: LOW QUALITY PROTEIN: hexaprenyldihydroxybenzoate
methyltransferase, mitochondrial-like [Macaca mulatta]
Length = 369
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G GGG +S+ ++ ++ K A + R + C
Sbjct: 146 FGMKILDVGCGGGLLTEPLGRLGASV--IGIDPVDENIKTAQCHKSFDPVLDKRIEYRVC 203
Query: 131 RIQE-APQMITTCDVISA 147
++E + T D + A
Sbjct: 204 SLEEIVEETAETFDAVVA 221
>gi|294463006|gb|ADE77041.1| unknown [Picea sitchensis]
Length = 409
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ--KTAAR 124
++ + I +D+G+G G I S+ + V +E+ R V
Sbjct: 33 RIDFHGRIVVDVGAGSG----ILSLFAAQAGAKHVYAVEASEMVDYARRLVAGNPSLGQH 88
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLL 157
V +I+E ++ D++ + + TLL
Sbjct: 89 ITVIKGKIEEV-ELPEKADILIS---EPMGTLL 117
>gi|317052167|ref|YP_004113283.1| type 11 methyltransferase [Desulfurispirillum indicum S5]
gi|316947251|gb|ADU66727.1| Methyltransferase type 11 [Desulfurispirillum indicum S5]
Length = 184
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+G G GF + + G V + + LR+ V+ TA
Sbjct: 32 LSPYVREGMTVLDIGCGPGFFTTDLADMVGD--RGRVIACDIQPAMLEKLRHKVRGTALE 89
Query: 125 GK-VFACRIQEAPQMITTCDVISA 147
+ VF + + D I A
Sbjct: 90 SRIVFHQCRETTTGLTEPVDFILA 113
>gi|221211565|ref|ZP_03584544.1| UbiE/COQ5 methyltransferase [Burkholderia multivorans CGD1]
gi|221168926|gb|EEE01394.1| UbiE/COQ5 methyltransferase [Burkholderia multivorans CGD1]
Length = 250
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ +DLG G G + V + + + ++ +
Sbjct: 42 DAAVLDLGCGAGHASFAVA-----PHVREVVAYDLAAPMLATVDAAARERGLANVRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P T D + +R
Sbjct: 97 PAERLPFDAATFDWVVSR 114
>gi|212715539|ref|ZP_03323667.1| hypothetical protein BIFCAT_00437 [Bifidobacterium catenulatum DSM
16992]
gi|212660906|gb|EEB21481.1| hypothetical protein BIFCAT_00437 [Bifidobacterium catenulatum DSM
16992]
Length = 247
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR P ++DLG G G + + + ++ + R +
Sbjct: 96 LRQAPEPPEEGTFLDLGCGWGPIALTLGFASPKAD---IWALDVNERALDLTRRNAELNG 152
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
R V A E P + T D+I +
Sbjct: 153 VRN-VRAVTADEIPSDV-TFDLIWS 175
>gi|218779296|ref|YP_002430614.1| methyltransferase type 11 [Desulfatibacillum alkenivorans AK-01]
gi|218760680|gb|ACL03146.1| Methyltransferase type 11 [Desulfatibacillum alkenivorans AK-01]
Length = 292
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 20/94 (21%)
Query: 68 LHPYPSIWIDLGSGGG---FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
L + +D+GSG G FP + V ++ + S L Q+ +
Sbjct: 73 LLNSQARILDVGSGPGTFAFPFAPLA--------NEVIAVDGSEEMCSILNQKAQEKGLQ 124
Query: 125 GKVFACRI-----QEAPQMITTCDVISARALADL 153
R+ E D++ A +
Sbjct: 125 NVKAFQRLWKDVDIEKEGWTRAFDLV----FASM 154
>gi|302843698|ref|XP_002953390.1| hypothetical protein VOLCADRAFT_94143 [Volvox carteri f.
nagariensis]
gi|300261149|gb|EFJ45363.1| hypothetical protein VOLCADRAFT_94143 [Volvox carteri f.
nagariensis]
Length = 241
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVN----LIESKNKKASFLRYVVQKTAARGKV 127
++LG+G G GI+ + + + + LI++ +A+ + ++ AA G
Sbjct: 41 GCRVVELGAGPGLVGILLAKMGAKVHITDIAKVLPLIDANI-EANGVGLKQRRGAAEGYA 99
Query: 128 FACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
+ +E D + AR LA ++
Sbjct: 100 VS---EELEWGKEGYDHVVAR-LASEPV--DWCL 127
>gi|293408299|ref|ZP_06652138.1| SAM-dependent methyltransferase [Escherichia coli B354]
gi|291471477|gb|EFF13960.1| SAM-dependent methyltransferase [Escherichia coli B354]
Length = 256
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPNASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|198425450|ref|XP_002125992.1| PREDICTED: similar to HMT1 hnRNP methyltransferase-like 2 [Ciona
intestinalis]
Length = 306
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 20/106 (18%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK-----NKKASFLR 115
+S+ + + +D+G G G + S+ + V IE KK
Sbjct: 13 NSIYHNKHLFRGKVVLDVGCGTG----VLSMFAAKAGAAKVIGIECSSIVDYAKKIVE-- 66
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
K + +++E + D+I L + Y
Sbjct: 67 --ANKLDHIVTLIKGKVEEVVLPVEKVDII-------LSEWMGYCL 103
>gi|206560971|ref|YP_002231736.1| putative biotin biosyntehsis related protein [Burkholderia
cenocepacia J2315]
gi|198037013|emb|CAR52934.1| putative biotin biosyntehsis related protein [Burkholderia
cenocepacia J2315]
Length = 250
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKVFAC 130
+ +DLG G G + V + + + ++ +
Sbjct: 42 DAAVLDLGCGAGHASFAVA-----PHVRDVVAYDLAAPMLATVDAAARERGLANVRTQQG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P T D + +R
Sbjct: 97 PAERLPFDTATFDWVVSR 114
>gi|170781618|ref|YP_001709950.1| hypothetical protein CMS_1213 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156186|emb|CAQ01328.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 205
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
LR P +D+G G G + +I+ S V ++ + R +
Sbjct: 51 LRNVPAPPAEGHLLDVGCGWGPVALDLAIRAPS---ATVWAVDVNERALELTRANARSLG 107
Query: 123 ARGK 126
Sbjct: 108 LDNV 111
>gi|117620051|ref|YP_858250.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|226712986|sp|A0KPP9|RSMC_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|117561458|gb|ABK38406.1| ribosomal RNA small subunit methyltransferase C
(rRNA(guanine-N(2)-)-methyltransferase) [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 342
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ L +D G G G G + + + ++ V +++ R + +
Sbjct: 196 LASLPAMQGSLLDFGCGAGVIGSVLAKRNPGLK---VTMVDINALALESSRRTLAINGLQ 252
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
G+V+A + + I +
Sbjct: 253 GEVWASDV--YSDIQGKFGRIVS 273
>gi|157159671|ref|YP_001456989.1| UbiE/COQ5 family methlytransferase [Escherichia coli HS]
gi|191167034|ref|ZP_03028856.1| methyltransferase, UbiE/COQ5 family [Escherichia coli B7A]
gi|218552785|ref|YP_002385698.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli IAI1]
gi|293418304|ref|ZP_06660739.1| SAM-dependent methyltransferase [Escherichia coli B088]
gi|309797925|ref|ZP_07692305.1| methyltransferase domain protein [Escherichia coli MS 145-7]
gi|157065351|gb|ABV04606.1| methyltransferase, UbiE/COQ5 family [Escherichia coli HS]
gi|190902927|gb|EDV62654.1| methyltransferase, UbiE/COQ5 family [Escherichia coli B7A]
gi|218359553|emb|CAQ97093.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli IAI1]
gi|291324832|gb|EFE64247.1| SAM-dependent methyltransferase [Escherichia coli B088]
gi|308118465|gb|EFO55727.1| methyltransferase domain protein [Escherichia coli MS 145-7]
gi|320201195|gb|EFW75778.1| methyltransferase, UbiE/COQ5 family [Escherichia coli EC4100B]
gi|323181622|gb|EFZ67037.1| ubiE/COQ5 methyltransferase family protein [Escherichia coli 1357]
gi|323945578|gb|EGB41628.1| methyltransferase domain-containing protein [Escherichia coli H120]
Length = 256
Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDTSVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|330983270|gb|EGH81373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 187
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI + E V L + +++ +
Sbjct: 80 WLADEPARILDLCTGSGCIGIACAEVFPDAE---VALADLSYDALEVANQNIERHGMEDR 136
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 137 VYTVQGDGFDGLPGQRFDLIVS 158
>gi|312872218|ref|ZP_07732291.1| methyltransferase small domain protein [Lactobacillus iners LEAF
2062A-h1]
gi|311092302|gb|EFQ50673.1| methyltransferase small domain protein [Lactobacillus iners LEAF
2062A-h1]
Length = 204
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 LKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F+ +I
Sbjct: 111 ---DNVNIFSSDCYRNLDEQEQFGLI 133
>gi|153007051|ref|YP_001381376.1| HemK family modification methylase [Anaeromyxobacter sp. Fw109-5]
gi|152030624|gb|ABS28392.1| modification methylase, HemK family [Anaeromyxobacter sp. Fw109-5]
Length = 285
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 28/84 (33%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
P +DL +G G G+ +++ V ++ + R + A
Sbjct: 105 AALAELPRGGRLLDLCTGSGAIGVTVALERPDAR---VLATDASEDALAVARENASRLGA 161
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
++ + A +VI++
Sbjct: 162 VVELAHGDLWAAVHGDARFEVIAS 185
>gi|71064628|ref|YP_263355.1| hypothetical protein Psyc_0047 [Psychrobacter arcticus 273-4]
gi|71037613|gb|AAZ17921.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 202
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Query: 62 SLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + + IDLG G G G+ + + + + LI+ + R +
Sbjct: 49 SLMLLDYVDFQNDDDSIDLGCGYGVLGMAAARECPNGQHT---LIDKDFMAVEYARLNCE 105
Query: 120 KTAARGKVFA 129
K
Sbjct: 106 KNGLNNVDVH 115
>gi|229015503|ref|ZP_04172501.1| hypothetical protein bcere0030_990 [Bacillus cereus AH1273]
gi|229021712|ref|ZP_04178294.1| hypothetical protein bcere0029_910 [Bacillus cereus AH1272]
gi|228739580|gb|EEL89994.1| hypothetical protein bcere0029_910 [Bacillus cereus AH1272]
gi|228745790|gb|EEL95794.1| hypothetical protein bcere0030_990 [Bacillus cereus AH1273]
Length = 213
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGDILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A ++ RI ++ + I + RA
Sbjct: 117 ANNRIENIRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|222032035|emb|CAP74774.1| Uncharacterized protein yafE [Escherichia coli LF82]
gi|312944813|gb|ADR25640.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli O83:H1 str. NRG 857C]
Length = 256
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|260819140|ref|XP_002604895.1| hypothetical protein BRAFLDRAFT_121641 [Branchiostoma floridae]
gi|229290224|gb|EEN60905.1| hypothetical protein BRAFLDRAFT_121641 [Branchiostoma floridae]
Length = 304
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 13/92 (14%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ ++LG+G G PG++ + + V L ++K+ L + K G
Sbjct: 126 DILQSAGSVLELGAGPGLPGLVAAKLAP--QPDRVVLTDNKDLVLDLLEKNIVKNFDNGD 183
Query: 127 VFACR-----------IQEAPQMITTCDVISA 147
A + + + DVI A
Sbjct: 184 PMADKPRCCHLEWGKGVTDFRDQYGGFDVILA 215
>gi|197335225|ref|YP_002155530.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Vibrio fischeri MJ11]
gi|197316715|gb|ACH66162.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Vibrio fischeri MJ11]
Length = 284
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L P +DLG+G G + + ++ ++ V ++ ++ + +
Sbjct: 106 ALDHLTPNAQSILDLGTGTGAIALAIASEMPTLN---VIGVDYQDDAVELAKENAKINHI 162
Query: 124 RGKVFA-CRIQEAPQMITTCDVISA 147
F E + D+I +
Sbjct: 163 NNVEFRQGSWFEPISLSDKFDIIVS 187
>gi|224071341|ref|XP_002303412.1| predicted protein [Populus trichocarpa]
gi|118482370|gb|ABK93108.1| unknown [Populus trichocarpa]
gi|222840844|gb|EEE78391.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 10/83 (12%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-------TAAR 124
I+LGSG G G++ + ++ E V + + ++++ + T +
Sbjct: 134 SKRVIELGSGYGLAGLVIA---ATTEALEVVISDGNPVVVDYIQHSIDANSTAFGNTKVK 190
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ + T DVI A
Sbjct: 191 TVTLHWDEEVTYNISNTFDVIVA 213
>gi|157377629|ref|YP_001476229.1| 3-demethylubiquinone-9 3-O-methyltransferase [Shewanella sediminis
HAW-EB3]
gi|157320003|gb|ABV39101.1| 3-demethylubiquinone-9 3-O-methyltransferase [Shewanella sediminis
HAW-EB3]
Length = 266
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 35/114 (30%), Gaps = 18/114 (15%)
Query: 42 KINLVSSSTVEDFWIRHVE-DSLRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGG 99
N +ED H E D + Q P+ +D+G G G + +G
Sbjct: 47 AFNQTRLIAIEDAIAYHFERD---LNQDVPFSDLSLLDIGCGAGLLCEPLA-----WQGA 98
Query: 100 LVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ--------EAPQMITTCDVI 145
V+ I++ + + R + C + E DV+
Sbjct: 99 RVSGIDASSHNIALARQHANSNSVTVDYRHCLAESLLTTGEKERITDTNQYDVV 152
>gi|149278374|ref|ZP_01884511.1| hypothetical protein PBAL39_19624 [Pedobacter sp. BAL39]
gi|149230744|gb|EDM36126.1| hypothetical protein PBAL39_19624 [Pedobacter sp. BAL39]
Length = 235
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V + +D+G+G G ++ + + + V I+ + + L + +
Sbjct: 29 AAVATANMDSGRILDIGTGTGVIALMLAQRFPLAQVDAVE-IDGVAAERAGLNFRSSDFS 87
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+R I + D+I +
Sbjct: 88 SRTTAHHTSIMDYEST-HPYDLIVS 111
>gi|157110873|ref|XP_001651286.1| ad-003 [Aedes aegypti]
gi|108883887|gb|EAT48112.1| ad-003 [Aedes aegypti]
Length = 259
Score = 34.3 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+F++ P P L G G + ++ + + V+L+E + + + T
Sbjct: 84 LFKIKPAPGRLQALDCGAGIGRVSKNLLMPT--FDRVDLVEQDTQFCATAEKELSPTGKL 141
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
G V+ +Q+ DVI +
Sbjct: 142 GTVYNVGLQDFQPEAGKYDVIWS 164
>gi|309805440|ref|ZP_07699487.1| methyltransferase small domain protein [Lactobacillus iners LactinV
09V1-c]
gi|312870886|ref|ZP_07730991.1| methyltransferase small domain protein [Lactobacillus iners LEAF
3008A-a]
gi|329920991|ref|ZP_08277519.1| methyltransferase small domain protein [Lactobacillus iners SPIN
1401G]
gi|308165258|gb|EFO67494.1| methyltransferase small domain protein [Lactobacillus iners LactinV
09V1-c]
gi|311093576|gb|EFQ51915.1| methyltransferase small domain protein [Lactobacillus iners LEAF
3008A-a]
gi|328935267|gb|EGG31747.1| methyltransferase small domain protein [Lactobacillus iners SPIN
1401G]
Length = 204
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 LKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F+ +I
Sbjct: 111 ---DNVNIFSSDCYRNLDEQEQFGLI 133
>gi|297156904|gb|ADI06616.1| putative RNA methylase [Streptomyces bingchenggensis BCW-1]
Length = 195
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DL G G G+ S V L+ES + A +R V+ G ++
Sbjct: 46 GARVLDLYGGSGAVGLEAL----SRGAEHVLLVESDARAARTIRANVRALGLPGAELRTG 101
Query: 131 RIQEA----PQMITTCDVI 145
R ++A DV+
Sbjct: 102 RAEQAIAGPAPESGPYDVV 120
>gi|297627202|ref|YP_003688965.1| transferase [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922967|emb|CBL57549.1| transferase [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 505
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 10/87 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + +DLG+G G + + V L + + L
Sbjct: 158 SLAQLTVPDRVGSALDLGAGCGVQSLHLA-----RHADTVTLTDINPR---ALDMARLTL 209
Query: 122 AARGKVFACRIQEAPQMIT--TCDVIS 146
A G R + + + D+I
Sbjct: 210 ALNGLDLDVRAGSFYEPVAHDSFDLIV 236
>gi|256829046|ref|YP_003157774.1| type 11 methyltransferase [Desulfomicrobium baculatum DSM 4028]
gi|256578222|gb|ACU89358.1| Methyltransferase type 11 [Desulfomicrobium baculatum DSM 4028]
Length = 154
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+P+ +D+GSG G L +E ++L E + + + RG++
Sbjct: 6 FPATLLDVGSGRGTFLWPLLEALPDLEVTSIDLNEDAIRVCQDV-HAGGMRRLRGRLMDA 64
Query: 131 RIQEAPQMITTCDVIS 146
R + + D ++
Sbjct: 65 RSLDFDS--GSFDGVT 78
>gi|226361520|ref|YP_002779298.1| methyltransferase [Rhodococcus opacus B4]
gi|226240005|dbj|BAH50353.1| putative methyltransferase [Rhodococcus opacus B4]
Length = 278
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 9/78 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARGKVFA 129
+D+ +G G I ++ +S+ G + L ++ ++A+ + A +
Sbjct: 51 GDRVLDVAAGSGNAAIPAALSGASVVAGDLTPELFDAGRRRAA-------ELGAEVEWRE 103
Query: 130 CRIQEAPQMITTCDVISA 147
+ P DV+ +
Sbjct: 104 ADAEAMPFADNEFDVVMS 121
>gi|154312110|ref|XP_001555383.1| hypothetical protein BC1G_06088 [Botryotinia fuckeliana B05.10]
gi|150850051|gb|EDN25244.1| hypothetical protein BC1G_06088 [Botryotinia fuckeliana B05.10]
Length = 341
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+DLG G G + + L + + + S+ +K ++ ++ V
Sbjct: 114 LKDGMSILDLGCGWGSGALYFAEVLPNSKITAFS--NSRTQKL-YIDEKAKEKGLNNLTV 170
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + + D + +
Sbjct: 171 ITGNVVDYEFEKESFDRVVS 190
>gi|94266698|ref|ZP_01290372.1| Thiopurine S-methyltransferase [delta proteobacterium MLMS-1]
gi|93452661|gb|EAT03221.1| Thiopurine S-methyltransferase [delta proteobacterium MLMS-1]
Length = 276
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 21/140 (15%)
Query: 12 ANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDS--LRVFQLH 69
+ L +S + +Y + K N + RH S L L
Sbjct: 20 LAWWLAEPRLSPGAQAVFDRYYSSY-----KHNFT------PYLRRHYA-SQTLEAQSLI 67
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK----KASFLRYVVQKTAARG 125
+ +++G G G + +I + + V+L E + K +AS LR +
Sbjct: 68 GKRTRVLEVGCGCGTESLWFAILGALV--VGVDLNEPRLKVARERASLLRETLGVLPIEA 125
Query: 126 KVFACRIQEAPQMITTCDVI 145
+ + + + D+I
Sbjct: 126 RFENASLFDF-KHEEEFDLI 144
>gi|19572327|emb|CAD19094.1| methyl transferase [Stigmatella aurantiaca]
Length = 256
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 5/78 (6%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P +D+G GGG + + S +G V ++ + K
Sbjct: 45 LDPTKVRVLDVGCGGGL----LAEEF-SKKGWKVTGVDQSAPSIELAKAHSAKVGLNIDY 99
Query: 128 FACRIQEAPQMITTCDVI 145
+ Q+ P T D++
Sbjct: 100 HVSKAQKLPFEDETFDIV 117
>gi|326919767|ref|XP_003206149.1| PREDICTED: protein arginine N-methyltransferase 3-like [Meleagris
gallopavo]
Length = 513
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ +D+G G G + + + + V+ E + +R + K
Sbjct: 233 PHIFKDKVVLDVGCGTGILSMFAAKAGAK-KVIGVDQSEIIYQAMDIIR--LNKLENTIT 289
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ RI+E + DVI +
Sbjct: 290 LIKGRIEEVDLPLEKVDVIIS 310
>gi|167562740|ref|ZP_02355656.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia oklahomensis EO147]
Length = 411
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI + IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPTCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLPAPDAVFVGGGVSR 328
>gi|42525775|ref|NP_970873.1| UbiE/COQ5 family methlytransferase [Treponema denticola ATCC 35405]
gi|41815786|gb|AAS10754.1| methlytransferase, UbiE/COQ5 family [Treponema denticola ATCC
35405]
Length = 250
Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FAC 130
+D G G GF +I L+ +G V I+S + ++ K+ F
Sbjct: 45 GKKVLDAGCGTGF----LAILLAQ-DGWEVTAIDSSEAMLEEGKKTAEELGLSDKITFLL 99
Query: 131 RIQEAPQMITT-CDVISAR 148
+ + D + +R
Sbjct: 100 KDAHSTDFPEHLFDAVVSR 118
>gi|324115454|gb|EGC09396.1| methyltransferase domain-containing protein [Escherichia coli
E1167]
Length = 256
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDTSVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|301054412|ref|YP_003792623.1| methyltransferase [Bacillus anthracis CI]
gi|300376581|gb|ADK05485.1| methyltransferase [Bacillus cereus biovar anthracis str. CI]
Length = 261
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG + + + ++L E + A ++++ A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFKEV--VALDLTEKMLENAK--KFIISNGHENVSFVAG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P ++ D I+ R
Sbjct: 97 NAESLPFSDSSFDTITCR 114
>gi|302853268|ref|XP_002958150.1| hypothetical protein VOLCADRAFT_99370 [Volvox carteri f.
nagariensis]
gi|300256511|gb|EFJ40775.1| hypothetical protein VOLCADRAFT_99370 [Volvox carteri f.
nagariensis]
Length = 441
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 10/83 (12%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVF 128
+D+G G G S+ + V ++ R +++ + V
Sbjct: 114 EGRTVLDVGCGLGL----LSMLAAKAGAARVVAVDGSEGAVDAARRIIKANGLSDKITVV 169
Query: 129 ACRIQEAPQMIT----TCDVISA 147
++E ++ DV+ +
Sbjct: 170 HGVLEELDELPGMSPSGFDVVMS 192
>gi|293375559|ref|ZP_06621833.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Turicibacter sanguinis PC909]
gi|325836756|ref|ZP_08166223.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Turicibacter sp. HGF1]
gi|292645776|gb|EFF63812.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Turicibacter sanguinis PC909]
gi|325491134|gb|EGC93423.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Turicibacter sp. HGF1]
Length = 283
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-I 132
+D+G+G G G+ +++ ++E + L E+ + A + A + +
Sbjct: 118 KLVDVGTGSGAIGVTLAVEEPNMEVTVTELSEAALEVA---KKNAANLGANVTFYQGDML 174
Query: 133 QEAPQMITTCDVISA 147
Q + D++ +
Sbjct: 175 QPLIERGLKFDILVS 189
>gi|282860466|ref|ZP_06269532.1| Methyltransferase type 11 [Streptomyces sp. ACTE]
gi|282564202|gb|EFB69738.1| Methyltransferase type 11 [Streptomyces sp. ACTE]
Length = 276
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 11/76 (14%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G+G G G V +E + A+F R +R +V R
Sbjct: 54 GRHVLDVGAGTGIEARQFRAV-----GCTVLGVEPDERMAAFARR------SRVEVEVAR 102
Query: 132 IQEAPQMITTCDVISA 147
++ D + A
Sbjct: 103 FEDWQPAGRQFDAVIA 118
>gi|237748712|ref|ZP_04579192.1| cyclopropane-fatty-acyl-phospholipid synthase [Oxalobacter
formigenes OXCC13]
gi|229380074|gb|EEO30165.1| cyclopropane-fatty-acyl-phospholipid synthase [Oxalobacter
formigenes OXCC13]
Length = 407
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G +I+ + G V I + R V++ K+ R
Sbjct: 173 GDRLLDIGCGWG----ALAIRAAEKFGANVVGITLSKNQYEMARQRVKEKGLEDKI-DIR 227
Query: 132 IQEAPQMITTCDVISA 147
IQ+ + D I++
Sbjct: 228 IQDYRDVTGKFDRITS 243
>gi|49477893|ref|YP_036968.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228927937|ref|ZP_04090982.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|229122432|ref|ZP_04251645.1| Methyltransferase type 11 [Bacillus cereus 95/8201]
gi|49329449|gb|AAT60095.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228660993|gb|EEL16620.1| Methyltransferase type 11 [Bacillus cereus 95/8201]
gi|228831627|gb|EEM77219.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 261
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG + + + ++L E + A ++++ A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFKEV--VALDLTEKMLENAK--KFIISNGHENVSFVAG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P ++ D I+ R
Sbjct: 97 NAESLPFSDSSFDTITCR 114
>gi|52142621|ref|YP_084208.1| methyltransferase [Bacillus cereus E33L]
gi|51976090|gb|AAU17640.1| methyltransferase [Bacillus cereus E33L]
Length = 261
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG + + + ++L E + A ++++ A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFKEV--VALDLTEKMLENAK--KFIISNGHENVSFVAG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P ++ D I+ R
Sbjct: 97 NAESLPFSDSSFDTITCR 114
>gi|186682008|ref|YP_001865204.1| Mg-protoporphyrin IX methyl transferase [Nostoc punctiforme PCC
73102]
gi|186464460|gb|ACC80261.1| magnesium protoporphyrin O-methyltransferase [Nostoc punctiforme
PCC 73102]
Length = 228
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 10/86 (11%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
D G G G I ++ +G V + K + ++T + +Q
Sbjct: 63 SICDAGCGVGSLSIPLAV-----DGAKVYATDISEKMVEEGKDRAKQTLGNDENPTFAVQ 117
Query: 134 EAPQMITTCDVISARALADLDTLLEY 159
+ + + + LD L+ Y
Sbjct: 118 DLESLSGSYHTVIC-----LDVLIHY 138
>gi|30262853|ref|NP_845230.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. Ames]
gi|47528184|ref|YP_019533.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185701|ref|YP_028953.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. Sterne]
gi|65320176|ref|ZP_00393135.1| COG0500: SAM-dependent methyltransferases [Bacillus anthracis str.
A2012]
gi|227814301|ref|YP_002814310.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. CDC
684]
gi|254685448|ref|ZP_05149308.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
str. CNEVA-9066]
gi|254722857|ref|ZP_05184645.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
str. A1055]
gi|254737906|ref|ZP_05195609.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
str. Western North America USA6153]
gi|254742921|ref|ZP_05200606.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
str. Kruger B]
gi|254752220|ref|ZP_05204257.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
str. Vollum]
gi|254760737|ref|ZP_05212761.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
str. Australia 94]
gi|30257486|gb|AAP26716.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. Ames]
gi|47503332|gb|AAT32008.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. 'Ames
Ancestor']
gi|49179628|gb|AAT55004.1| methlytransferase, UbiE/COQ5 family [Bacillus anthracis str.
Sterne]
gi|227005462|gb|ACP15205.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. CDC
684]
Length = 258
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG + + + ++L E + A ++++ A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFKEV--VALDLTEKMLENAK--KFIISNGHENVSFVAG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P ++ D I+ R
Sbjct: 97 NAESLPFSDSSFDTITCR 114
>gi|320102704|ref|YP_004178295.1| type 11 methyltransferase [Isosphaera pallida ATCC 43644]
gi|319749986|gb|ADV61746.1| Methyltransferase type 11 [Isosphaera pallida ATCC 43644]
Length = 238
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ P +D+G G G + E ++L+ ++ R ++ R +
Sbjct: 43 RFGSKPFRLLDVGCGTGQFVAEVRDRFPHAEVVALDLVRGMLERG---RERWERIGDRVR 99
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ P + T DVI+
Sbjct: 100 PVQGDGERLPFVDQTFDVITC 120
>gi|296273668|ref|YP_003656299.1| methyltransferase small [Arcobacter nitrofigilis DSM 7299]
gi|296097842|gb|ADG93792.1| methyltransferase small [Arcobacter nitrofigilis DSM 7299]
Length = 236
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 56 IRHVEDS-LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL 114
+ H ++ L++F+ +D+GSG G G++ + + E + K
Sbjct: 19 LHHFINTNLKIFKNIKGE--LLDIGSGSGILGLLVARDNPRLNLNQ---CEVQEKFQELT 73
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + K++ + Q+ T D+ +
Sbjct: 74 KINSKNNKIESKIYKGKYQDI-NFDKTFDICVS 105
>gi|260576183|ref|ZP_05844176.1| ubiquinone biosynthesis O-methyltransferase [Rhodobacter sp. SW2]
gi|259021663|gb|EEW24966.1| ubiquinone biosynthesis O-methyltransferase [Rhodobacter sp. SW2]
Length = 247
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 6/82 (7%)
Query: 65 VFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P+ +D+G GGG + G V ++ + + ++
Sbjct: 55 LTAHQPFAGLRILDIGCGGGLLSEPMARL-----GATVVGADAAPRNIPVAQLHAEQMGL 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ DV+
Sbjct: 110 DIDYRNTTAEALAAAGEQFDVV 131
>gi|257459362|ref|ZP_05624473.1| bifunctional methyltransferase [Campylobacter gracilis RM3268]
gi|257443215|gb|EEV18347.1| bifunctional methyltransferase [Campylobacter gracilis RM3268]
Length = 256
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + Q P ++G+G G I L S + + R +
Sbjct: 87 LALAQSLGEP-RICEIGTGSGIIAICLKKLLPSCR---IAASDISADALEVARANAASSG 142
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A + C A ++ D+I +
Sbjct: 143 ADVEFVHC--AYADEIAGEFDLIVS 165
>gi|229017889|ref|ZP_04174771.1| hypothetical protein bcere0030_24290 [Bacillus cereus AH1273]
gi|229027128|ref|ZP_04183426.1| hypothetical protein bcere0029_53760 [Bacillus cereus AH1272]
gi|228734178|gb|EEL84874.1| hypothetical protein bcere0029_53760 [Bacillus cereus AH1272]
gi|228743402|gb|EEL93520.1| hypothetical protein bcere0030_24290 [Bacillus cereus AH1273]
Length = 196
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFAC 130
+DLGSG G I + I S V+L++S K L+ ++ K
Sbjct: 15 ILDLGSGVGRNSIPIAQKIMNSGGTVTCVDLLDSALMK---LQVYSKEYGVFEYIKTEQA 71
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I++ T D I A++ L+
Sbjct: 72 AIEDYYIAPNTYDYIV--AVSSLE 93
>gi|225850601|ref|YP_002730835.1| methyltransferase small [Persephonella marina EX-H1]
gi|225646244|gb|ACO04430.1| methyltransferase small [Persephonella marina EX-H1]
Length = 246
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 14/95 (14%)
Query: 60 EDSLRVF---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK---NKKASF 113
DS+ + ++ IDLG+G G I+ S++ +E + + E K+
Sbjct: 30 IDSVILSSFPEITKKKGKIIDLGTGSGIILILLSLKYPDLEFHAIEIQEDLFDMAKRNFE 89
Query: 114 LRYVVQKTAARGKVFACRIQEAPQMITT--CDVIS 146
L V + I++ ++ D +
Sbjct: 90 LNRV------NVNLIKGDIKDIKKLYQPQYFDYVI 118
>gi|48477185|ref|YP_022891.1| SAM-dependent methyltransferase [Picrophilus torridus DSM 9790]
gi|48429833|gb|AAT42698.1| SAM-dependent methyltransferase [Picrophilus torridus DSM 9790]
Length = 196
Score = 34.3 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 16/100 (16%)
Query: 59 VEDSLR---VFQLHPY---------PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+S+ + +L+ + PS +D+G+G G ++ + + G + ++
Sbjct: 18 FYNSIAWRLLKKLYKFSINRLDGLSPSTIMDIGAGPGRFSLMVAKKFP---GARIYCVDP 74
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
R + +K +E P + D+I
Sbjct: 75 SPYMVETERKLFKKNNINAVCVQGSSREVP-LNEKFDLII 113
>gi|325496136|gb|EGC93995.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia fergusonii ECD227]
Length = 256
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|324326861|gb|ADY22121.1| methyltransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 261
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG + + + ++L E + A ++++ A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFKEV--VALDLTEKMLENAK--KFIISNGHENVSFVAG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P ++ D I+ R
Sbjct: 97 NAESLPFSDSSFDTITCR 114
>gi|307258110|ref|ZP_07539862.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306863473|gb|EFM95404.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 329
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + + + G V A
Sbjct: 190 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRRTLAENSLEGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSHIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|298369777|ref|ZP_06981094.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sp. oral
taxon 014 str. F0314]
gi|298282334|gb|EFI23822.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sp. oral
taxon 014 str. F0314]
Length = 238
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA-SFLRYVVQKTAARGKVFAC 130
+D+G GGG I S ++ V I+ K + + +
Sbjct: 53 GKRVLDVGCGGG----ILSESMAKRGAAHVTGIDMAEKSLQTAQTHAAAQKVGNIAYRCV 108
Query: 131 RIQE-APQMITTCDVISA 147
R+++ A + + DV++
Sbjct: 109 RVEDLAAEAPHSFDVVTC 126
>gi|260654407|ref|ZP_05859897.1| putative precorrin-6y methylase [Jonquetella anthropi E3_33 E1]
gi|260631040|gb|EEX49234.1| putative precorrin-6y methylase [Jonquetella anthropi E3_33 E1]
Length = 409
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P +W D+G+G G + ++ G+V +E + + +R
Sbjct: 242 LSLLAPQPGDVLW-DVGAGTGSVSVELALAAPE---GIVWAVEREPEGIELIRANAAALR 297
Query: 123 A-RGKVFACRIQEAPQMITTCDVI 145
A KV A EA + + + D +
Sbjct: 298 AYNVKVVAGTAPEALEALPSPDRV 321
>gi|258646843|ref|ZP_05734312.1| methyltransferase type 11 [Dialister invisus DSM 15470]
gi|260404280|gb|EEW97827.1| methyltransferase type 11 [Dialister invisus DSM 15470]
Length = 251
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 7/90 (7%)
Query: 62 SLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS--FLRYV 117
SL +D+G GGG I S L + G V I+ + F+R
Sbjct: 33 SLWGISHLDLAGNEKILDIGCGGG---INLSRFLKKVPRGHVTGIDLSPDCVNYSFMRNR 89
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
R V+ + P DVI+A
Sbjct: 90 DAIAEGRCSVYEGSAELLPFGANHFDVITA 119
>gi|254824090|ref|ZP_05229091.1| methyltransferase [Listeria monocytogenes FSL J1-194]
gi|255520381|ref|ZP_05387618.1| methyltransferase, UbiE/COQ5 family protein [Listeria monocytogenes
FSL J1-175]
gi|293593321|gb|EFG01082.1| methyltransferase [Listeria monocytogenes FSL J1-194]
Length = 197
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L+ + + +DLG+G GF I + + V ++ K + ++
Sbjct: 33 DFLQAMPIGK-TASILDLGAGTGFLTIPAA----KLVDNTVFALDLDAKMLELIESKAKE 87
Query: 121 TAA-RGKVFACRIQEAPQMITTCDVISA 147
+ + + P + DV+ A
Sbjct: 88 AGLANVETLEASMDDIPLEANSVDVVLA 115
>gi|225027593|ref|ZP_03716785.1| hypothetical protein EUBHAL_01850 [Eubacterium hallii DSM 3353]
gi|224955109|gb|EEG36318.1| hypothetical protein EUBHAL_01850 [Eubacterium hallii DSM 3353]
Length = 322
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 13/113 (11%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGII-TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
++ + + +D+G+G G II + + I+ +A+ + + A
Sbjct: 167 QLKKYIKKDTELLDVGTGSGILSIIGLKL---GAHHAMATDIDPNAIRATDENFAINGVA 223
Query: 123 ARGKVFACRI---QEAPQMITT-----CDVISARALADLDT-LLEYSFPWLYQ 166
+ +V I EA + DV+ A LAD+ L P L +
Sbjct: 224 GQAEVQQVNILDQDEAYRFYEKNNGKRYDVVVANILADVIIPLSGIVTPLLKE 276
>gi|149915799|ref|ZP_01904324.1| protein-L-isoaspartate O-methyltransferase, putative [Roseobacter
sp. AzwK-3b]
gi|149810381|gb|EDM70226.1| protein-L-isoaspartate O-methyltransferase, putative [Roseobacter
sp. AzwK-3b]
Length = 217
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 10/89 (11%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ DSL + +D+GS G+ + + V +E A+ + ++
Sbjct: 70 LLDSL----DIRSSELVLDVGSALGYSAAVIARM-----AEAVVAVEEDRDMANEAQGLL 120
Query: 119 QKTAARGK-VFACRIQEAPQMITTCDVIS 146
+ A V + E DVI
Sbjct: 121 SEHGADNVIVHHGPLAEGAPEHGPYDVIV 149
>gi|118588513|ref|ZP_01545922.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614]
gi|118439219|gb|EAV45851.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614]
Length = 282
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ D+G+G G + +L V+L E + + + + R
Sbjct: 111 DEAPVMCDIGTGTGAIAVTLLAELPRSRMIAVDLSE-QALECAASNAALHGVGDRLLTVR 169
Query: 130 CRIQEAPQMITTCDVISA 147
A + D + +
Sbjct: 170 ADYTSALRPEGGFDWVVS 187
>gi|26987107|ref|NP_742532.1| biotin biosynthesis protein BioC [Pseudomonas putida KT2440]
gi|24981735|gb|AAN65996.1|AE016228_9 biotin biosynthesis protein BioC [Pseudomonas putida KT2440]
Length = 272
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 15/101 (14%)
Query: 63 LRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L + + P PS W+DLGSG G + + + + G V++ E L +
Sbjct: 42 LSLLEQLPAGLQPSHWLDLGSGTGHFSRMLAERFAQAGGVAVDIAEGM------LLHARH 95
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ P + D++ + L ++
Sbjct: 96 VKGGAQYHVVGDAERLPLRDASVDLV----FSSLAV--QWC 130
>gi|51473802|ref|YP_067559.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia typhi str.
Wilmington]
gi|57013191|sp|Q68WB5|UBIG_RICTY RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|51460114|gb|AAU04077.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rickettsia typhi str.
Wilmington]
Length = 246
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 22/117 (18%)
Query: 39 WSK--------KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITS 90
W+K +IN + + + H D + +L +D+G GGG +
Sbjct: 20 WNKDGEFGILHRINHIRIEYIIEKIKLHYND---ISKLQ-----ILDVGCGGGLIAAPLA 71
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+G V I++ QK + I+E DV+
Sbjct: 72 -----SQGFNVTAIDALKSNIETATIYAQKNDLKINYLQTTIEELENDKL-YDVVIC 122
>gi|16802679|ref|NP_464164.1| hypothetical protein lmo0637 [Listeria monocytogenes EGD-e]
gi|47096300|ref|ZP_00233897.1| methyltransferase, UbiE/COQ5 family [Listeria monocytogenes str.
1/2a F6854]
gi|217965273|ref|YP_002350951.1| methyltransferase, UbiE/COQ5 family [Listeria monocytogenes HCC23]
gi|224498716|ref|ZP_03667065.1| methyltransferase, UbiE/COQ5 family protein [Listeria monocytogenes
Finland 1988]
gi|224502063|ref|ZP_03670370.1| methyltransferase, UbiE/COQ5 family protein [Listeria monocytogenes
FSL R2-561]
gi|254830377|ref|ZP_05235032.1| methyltransferase, UbiE/COQ5 family protein [Listeria monocytogenes
10403S]
gi|254900130|ref|ZP_05260054.1| methyltransferase, UbiE/COQ5 family protein [Listeria monocytogenes
J0161]
gi|254911316|ref|ZP_05261328.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254935643|ref|ZP_05267340.1| methyltransferase [Listeria monocytogenes F6900]
gi|255025668|ref|ZP_05297654.1| methyltransferase, UbiE/COQ5 family protein [Listeria monocytogenes
FSL J2-003]
gi|16410026|emb|CAC98715.1| lmo0637 [Listeria monocytogenes EGD-e]
gi|47015345|gb|EAL06281.1| methyltransferase, UbiE/COQ5 family [Listeria monocytogenes str.
1/2a F6854]
gi|217334543|gb|ACK40337.1| methyltransferase, UbiE/COQ5 family [Listeria monocytogenes HCC23]
gi|258608224|gb|EEW20832.1| methyltransferase [Listeria monocytogenes F6900]
gi|293589247|gb|EFF97581.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|307570171|emb|CAR83350.1| methyltransferase, UbiE/COQ5 family [Listeria monocytogenes L99]
Length = 197
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L+ + + +DLG+G GF I + + V ++ K + ++
Sbjct: 33 DFLQAMPIGK-TASILDLGAGTGFLTIPAA----KLVDNTVFALDLDAKMLELIESKAKE 87
Query: 121 TAA-RGKVFACRIQEAPQMITTCDVISA 147
+ + + P + DV+ A
Sbjct: 88 AGLANVETLEASMDDIPLEANSVDVVLA 115
>gi|332671691|ref|YP_004454699.1| type 11 methyltransferase [Cellulomonas fimi ATCC 484]
gi|332340729|gb|AEE47312.1| Methyltransferase type 11 [Cellulomonas fimi ATCC 484]
Length = 304
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+G GGG + + G V ++ + + R V V
Sbjct: 92 GTRALDVGCGGGQLLAVLA-----ARGATVAGVDPAPRMVARARAAV----PGADVRRGD 142
Query: 132 IQEAPQMITTCDVISA 147
+ P DV+ +
Sbjct: 143 AEHLPWPDAAFDVVVS 158
>gi|301165652|emb|CBW25223.1| putative exported protein [Bacteriovorax marinus SJ]
Length = 224
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 14/101 (13%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P S +D+G G G + + +G V ++ R + + R
Sbjct: 67 YIPLASKVLDVGMGEGRNTVFLA-----RKGYNVTGVDISAIAVRKARRLAAEHGIRINA 121
Query: 128 FACRIQEAPQMITTCDVI-----SARALADLD-TLLEYSFP 162
+++ ++ D I R +L+ L+E+ P
Sbjct: 122 VVSSMEDFKGEKSSFDAILVFYYVDR---ELNKKLIEWLKP 159
>gi|260598751|ref|YP_003211322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Cronobacter turicensis z3032]
gi|260217928|emb|CBA32526.1| Uncharacterized adenine-specific methylase yfcB [Cronobacter
turicensis z3032]
Length = 310
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + H + P +D+ +G G I + + E V+ +
Sbjct: 111 LVPRSPIGELINNHFA---GLIDHEPQ--HILDMCTGSGCIAIACAYAFPNAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +++ V R + D+I
Sbjct: 163 DISTDALAVTEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDIIV 205
>gi|239993410|ref|ZP_04713934.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
[Alteromonas macleodii ATCC 27126]
Length = 250
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
ID+GSGGG + G V I++ + Q T +
Sbjct: 70 SVIDIGSGGGLISEPLAKL-----GAQVTGIDASAVSVEVAKRHAQNTGVKVDYQHKLSS 124
Query: 134 EAPQMITTCDVIS 146
E + DV+
Sbjct: 125 EVVEEGRQYDVVI 137
>gi|213420560|ref|ZP_03353626.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E01-6750]
Length = 191
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + H + P +D+ +G G I + E V+ +
Sbjct: 2 LVPRSPIGELINNHFAGLIS-----QQPKYILDMCTGSGCIAIACAYAFPDAE---VDAV 53
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +++ V R + D+I
Sbjct: 54 DISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIV 96
>gi|167569923|ref|ZP_02362797.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Burkholderia oklahomensis C6786]
Length = 411
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 9/83 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ D+G+G G GI + IE+ + F+ + ++ A
Sbjct: 249 GELLWDVGAGCGSIGIEWMRAHPTCRTIA---IEAHPDRQRFIEHNRDALGVPALELVAG 305
Query: 131 RIQEAPQMITTCDVI-----SAR 148
R +A + D + +R
Sbjct: 306 RAPDALAGLPAPDAVFVGGGVSR 328
>gi|91787679|ref|YP_548631.1| 3-demethylubiquinone-9 3-methyltransferase [Polaromonas sp. JS666]
gi|91696904|gb|ABE43733.1| 3-demethylubiquinone-9 3-methyltransferase [Polaromonas sp. JS666]
Length = 235
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G GGG + ++ + ++L K A Q + +
Sbjct: 51 GQRVLDVGCGGGI--LADAMARKGADVLGIDLATKALKVAQLHALEAQTEGVEYREISAE 108
Query: 132 IQEAPQMITTCDVISA 147
A Q + DV++
Sbjct: 109 ALAAEQP-ASFDVVTC 123
>gi|49084994|gb|AAT51244.1| PA2179 [synthetic construct]
Length = 317
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ L V A G + R
Sbjct: 138 RRAADIGCGAGPGAIRIAMACPDAE---VHGLDINPAALD-LARVNAALAGVGNLTLARS 193
Query: 133 QEAPQMITTCDVISA 147
Q D+I A
Sbjct: 194 DLLSQAPGRFDLIVA 208
>gi|46143347|ref|ZP_00135433.2| COG2813: 16S RNA G1207 methylase RsmC [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209459|ref|YP_001054684.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
pleuropneumoniae L20]
gi|226712982|sp|A3N3U3|RSMC_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|126098251|gb|ABN75079.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 329
Score = 34.3 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 17/94 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+DLG G G G Q I+ + + + R + A G V A
Sbjct: 190 KGKVLDLGCGAGVIGASLKQQFEKIK---LTMSDIHAMALESSRRTFAENALDGTVVASD 246
Query: 132 IQEAPQMITTCDVISA------------RALADL 153
+ + D+I + RA+ DL
Sbjct: 247 V--FSNIEERFDLIVSNPPFHDGIDTAYRAVEDL 278
>gi|290892832|ref|ZP_06555823.1| methyltransferase [Listeria monocytogenes FSL J2-071]
gi|290557644|gb|EFD91167.1| methyltransferase [Listeria monocytogenes FSL J2-071]
Length = 197
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L+ + + +DLG+G GF +I + + V ++ K + ++
Sbjct: 33 DFLQAMPIGK-TASILDLGAGTGF----LTIPAAKLVDNTVFALDLDAKMLELIESKAKE 87
Query: 121 TAA-RGKVFACRIQEAPQMITTCDVISA 147
+ + + P + DV+ A
Sbjct: 88 AGLANVETLEASMDDIPLEANSVDVVLA 115
>gi|218288924|ref|ZP_03493175.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius LAA1]
gi|218241013|gb|EED08190.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius LAA1]
Length = 275
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 38/129 (29%), Gaps = 19/129 (14%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+V R +E+ F L+ + E L + L P IDLG
Sbjct: 3 DVVRNNIERFSGFAKLYDTY-------RPEAPETVRE------LLIAYLGHKPDTVIDLG 49
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQM 138
SG G E V +E + + A F + A P
Sbjct: 50 SGTGLSTFPW-----RHEARRVIGVEPNDDMRAQAERRAMDLGADNVTFLQGVSTAIPCS 104
Query: 139 ITTCDVISA 147
+ D+++
Sbjct: 105 DASADLVTC 113
>gi|15923531|ref|NP_371065.1| hypothetical protein SAV0541 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926219|ref|NP_373752.1| hypothetical protein SA0499 [Staphylococcus aureus subsp. aureus
N315]
gi|49482771|ref|YP_039995.1| hypothetical protein SAR0546 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|57651417|ref|YP_185473.1| hypothetical protein SACOL0587 [Staphylococcus aureus subsp. aureus
COL]
gi|87161944|ref|YP_493229.1| methyltransferase small subunit [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194303|ref|YP_499095.1| hypothetical protein SAOUHSC_00523 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267001|ref|YP_001245944.1| hypothetical protein SaurJH9_0564 [Staphylococcus aureus subsp.
aureus JH9]
gi|150393048|ref|YP_001315723.1| hypothetical protein SaurJH1_0578 [Staphylococcus aureus subsp.
aureus JH1]
gi|151220715|ref|YP_001331537.1| hypothetical protein NWMN_0503 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156978870|ref|YP_001441129.1| hypothetical protein SAHV_0539 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161508781|ref|YP_001574440.1| hypothetical protein USA300HOU_0535 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141022|ref|ZP_03565515.1| hypothetical protein SauraJ_05208 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253315651|ref|ZP_04838864.1| methyltransferase small subunit [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732549|ref|ZP_04866714.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005335|ref|ZP_05143936.2| methyltransferase small subunit [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257424655|ref|ZP_05601082.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427323|ref|ZP_05603722.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429959|ref|ZP_05606343.1| methyltransferase small domain-containing protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257432661|ref|ZP_05609021.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435565|ref|ZP_05611613.1| methyltransferase small domain-containing protein [Staphylococcus
aureus subsp. aureus M876]
gi|257795360|ref|ZP_05644339.1| methyltransferase [Staphylococcus aureus A9781]
gi|258408953|ref|ZP_05681234.1| methyltransferase [Staphylococcus aureus A9763]
gi|258420409|ref|ZP_05683352.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus aureus A9719]
gi|258439330|ref|ZP_05690262.1| methyltransferase small domain-containing protein [Staphylococcus
aureus A9299]
gi|258444070|ref|ZP_05692407.1| methyltransferase small subunit [Staphylococcus aureus A8115]
gi|258446338|ref|ZP_05694496.1| methyltransferase small domain-containing protein [Staphylococcus
aureus A6300]
gi|258448431|ref|ZP_05696546.1| methyltransferase small domain-containing protein [Staphylococcus
aureus A6224]
gi|258452726|ref|ZP_05700724.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|258453787|ref|ZP_05701761.1| methyltransferase small subunit [Staphylococcus aureus A5937]
gi|262049584|ref|ZP_06022453.1| hypothetical protein SAD30_0378 [Staphylococcus aureus D30]
gi|269202164|ref|YP_003281433.1| hypothetical protein SAAV_0504 [Staphylococcus aureus subsp. aureus
ED98]
gi|282894976|ref|ZP_06303199.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A8117]
gi|282904919|ref|ZP_06312777.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282907869|ref|ZP_06315704.1| methyltransferase small subunit [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910182|ref|ZP_06317986.1| methyltransferase small subunit [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282913374|ref|ZP_06321163.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus M899]
gi|282918329|ref|ZP_06326066.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus C427]
gi|282923291|ref|ZP_06330971.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus C101]
gi|282924455|ref|ZP_06332127.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A9765]
gi|282928878|ref|ZP_06336469.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A10102]
gi|283957339|ref|ZP_06374792.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284023551|ref|ZP_06377949.1| hypothetical protein Saura13_03137 [Staphylococcus aureus subsp.
aureus 132]
gi|293500420|ref|ZP_06666271.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus 58-424]
gi|293509365|ref|ZP_06668076.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus M809]
gi|293523952|ref|ZP_06670639.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus M1015]
gi|294850317|ref|ZP_06791051.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A9754]
gi|295406918|ref|ZP_06816721.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A8819]
gi|295427079|ref|ZP_06819715.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|296275787|ref|ZP_06858294.1| hypothetical protein SauraMR_05547 [Staphylococcus aureus subsp.
aureus MR1]
gi|297246258|ref|ZP_06930107.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A8796]
gi|297590568|ref|ZP_06949207.1| methyltransferase domain protein [Staphylococcus aureus subsp.
aureus MN8]
gi|304381860|ref|ZP_07364507.1| methyltransferase domain protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|677850|emb|CAA45511.1| hypothetical protein [Staphylococcus aureus RN4220]
gi|13700432|dbj|BAB41730.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246309|dbj|BAB56703.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|49240900|emb|CAG39567.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|57285603|gb|AAW37697.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
COL]
gi|87127918|gb|ABD22432.1| Methyltransferase small domain [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201861|gb|ABD29671.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740070|gb|ABQ48368.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus JH9]
gi|149945500|gb|ABR51436.1| methyltransferase small [Staphylococcus aureus subsp. aureus JH1]
gi|150373515|dbj|BAF66775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721005|dbj|BAF77422.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367590|gb|ABX28561.1| hypothetical protein USA300HOU_0535 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253729478|gb|EES98207.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257272225|gb|EEV04348.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275516|gb|EEV06989.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279156|gb|EEV09757.1| methyltransferase small domain-containing protein [Staphylococcus
aureus subsp. aureus 68-397]
gi|257282076|gb|EEV12211.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257284756|gb|EEV14875.1| methyltransferase small domain-containing protein [Staphylococcus
aureus subsp. aureus M876]
gi|257789332|gb|EEV27672.1| methyltransferase [Staphylococcus aureus A9781]
gi|257840304|gb|EEV64767.1| methyltransferase [Staphylococcus aureus A9763]
gi|257843599|gb|EEV68005.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus aureus A9719]
gi|257847667|gb|EEV71666.1| methyltransferase small domain-containing protein [Staphylococcus
aureus A9299]
gi|257850740|gb|EEV74685.1| methyltransferase small subunit [Staphylococcus aureus A8115]
gi|257854932|gb|EEV77877.1| methyltransferase small domain-containing protein [Staphylococcus
aureus A6300]
gi|257858300|gb|EEV81187.1| methyltransferase small domain-containing protein [Staphylococcus
aureus A6224]
gi|257859599|gb|EEV82449.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257864043|gb|EEV86797.1| methyltransferase small subunit [Staphylococcus aureus A5937]
gi|259162324|gb|EEW46897.1| hypothetical protein SAD30_0378 [Staphylococcus aureus D30]
gi|262074454|gb|ACY10427.1| hypothetical protein SAAV_0504 [Staphylococcus aureus subsp. aureus
ED98]
gi|269940114|emb|CBI48490.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
TW20]
gi|282314159|gb|EFB44549.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus C101]
gi|282317463|gb|EFB47835.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus C427]
gi|282322406|gb|EFB52728.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus M899]
gi|282325574|gb|EFB55882.1| methyltransferase small subunit [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282328253|gb|EFB58531.1| methyltransferase small subunit [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331744|gb|EFB61255.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282589486|gb|EFB94575.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A10102]
gi|282592866|gb|EFB97870.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A9765]
gi|282762658|gb|EFC02795.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A8117]
gi|283790790|gb|EFC29605.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285816242|gb|ADC36729.1| hypothetical protein SA2981_0518 [Staphylococcus aureus 04-02981]
gi|290920915|gb|EFD97976.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus M1015]
gi|291095425|gb|EFE25686.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus 58-424]
gi|291467462|gb|EFF09977.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus M809]
gi|294822829|gb|EFG39264.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A9754]
gi|294968149|gb|EFG44175.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A8819]
gi|295128867|gb|EFG58497.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|297176856|gb|EFH36114.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus A8796]
gi|297576867|gb|EFH95582.1| methyltransferase domain protein [Staphylococcus aureus subsp.
aureus MN8]
gi|302750432|gb|ADL64609.1| methyltransferase small domain protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304339646|gb|EFM05593.1| methyltransferase domain protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312439039|gb|ADQ78110.1| methyltransferase domain protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|312829037|emb|CBX33879.1| uncharacterized protein ybxB (P23) (ORF23) [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315128834|gb|EFT84833.1| hypothetical protein CGSSa03_13117 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315193905|gb|EFU24299.1| hypothetical protein CGSSa00_12767 [Staphylococcus aureus subsp.
aureus CGS00]
gi|315196647|gb|EFU26994.1| hypothetical protein CGSSa01_14540 [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141594|gb|EFW33433.1| methyltransferase small domain protein [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320141777|gb|EFW33605.1| methyltransferase small domain protein [Staphylococcus aureus
subsp. aureus MRSA177]
gi|329313261|gb|AEB87674.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
aureus T0131]
gi|329727940|gb|EGG64389.1| methyltransferase small domain protein [Staphylococcus aureus
subsp. aureus 21172]
gi|329731023|gb|EGG67396.1| methyltransferase small domain protein [Staphylococcus aureus
subsp. aureus 21189]
gi|1094969|prf||2107219A rpoB upstream ORF
gi|1096953|prf||2113202A ORF 202
Length = 202
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ HP D+G G G G++ + + +++ ++ + + +
Sbjct: 53 LKAHPPGPSKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVEKNKKLNGI 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ + + D I
Sbjct: 110 DNVIVKESDALSAVEDKSFDFI 131
>gi|325696648|gb|EGD38537.1| methyltransferase domain protein [Streptococcus sanguinis SK160]
Length = 195
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ +G +++ + + ++
Sbjct: 50 LSVLDF-ETGEQVLDVGCGYG----PLGLTLAKAQGVTATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D I + RA
Sbjct: 105 ISADIFQSNV--YEKVSGIFDHIISNPPIRA 133
>gi|322385290|ref|ZP_08058935.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus
ATCC 51100]
gi|321270549|gb|EFX53464.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus
ATCC 51100]
Length = 276
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 11/103 (10%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ L + + +D+G+G G + + + +L
Sbjct: 89 LIPRPETEELVE------LILSENPEKSLSVLDIGTGSGAIALALANSRPDWQITASDLS 142
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
E + Q EA + T D+I +
Sbjct: 143 E---DALALAAENAQSCGLDLAFVQSDCMEA--ISGTFDIIVS 180
>gi|313110982|ref|ZP_07796822.1| putative methylase [Pseudomonas aeruginosa 39016]
gi|310883324|gb|EFQ41918.1| putative methylase [Pseudomonas aeruginosa 39016]
Length = 316
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ L V A G + R
Sbjct: 138 RRAADIGCGAGPGAIRIAMACPDAE---VHGLDINPAALD-LARVNAALAGVGNLTLARS 193
Query: 133 QEAPQMITTCDVISA 147
Q D+I A
Sbjct: 194 DLLSQAPGRFDLIVA 208
>gi|301021450|ref|ZP_07185474.1| methyltransferase domain protein [Escherichia coli MS 69-1]
gi|300398086|gb|EFJ81624.1| methyltransferase domain protein [Escherichia coli MS 69-1]
Length = 256
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAHMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 91 LKNITTRQGYVESLPFADNAFDIVISR 117
>gi|257469306|ref|ZP_05633400.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
ulcerans ATCC 49185]
gi|317063553|ref|ZP_07928038.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
ulcerans ATCC 49185]
gi|313689229|gb|EFS26064.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
ulcerans ATCC 49185]
Length = 225
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 16/92 (17%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITS-------IQLSSIEGGLVNLIESKNKKASFLR 115
L F +P +D+G+G G I+ S I I+ + L E +
Sbjct: 32 LSDFFAYPKKGKILDIGTGNGVIPILLSSKEKGEDITGIDIQEENIELAEKNIE------ 85
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ K+ ++E M + D I +
Sbjct: 86 --LNCLKENIKIVHGDVKE-YSMGNSFDYIVS 114
>gi|120402278|ref|YP_952107.1| type 12 methyltransferase [Mycobacterium vanbaalenii PYR-1]
gi|119955096|gb|ABM12101.1| Methyltransferase type 12 [Mycobacterium vanbaalenii PYR-1]
Length = 350
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 15/101 (14%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + +D+G+G G + + G V+ +E K A LR K +V
Sbjct: 140 PETARVLDIGAGTGRNALALA-----RRGHPVDAVELTPKFAEILRTEAFKHLLNIRVID 194
Query: 130 CRIQEAPQMITTCDV-------ISA--RALADLDTLLEYSF 161
+ E + D + + R +A L + E +
Sbjct: 195 RDVFETMDDLQK-DYQLIVLSEVVSDFRNVAQLRAIFELAA 234
>gi|86740630|ref|YP_481030.1| cyclopropane-fatty-acyl-phospholipid synthase [Frankia sp. CcI3]
gi|86567492|gb|ABD11301.1| Cyclopropane-fatty-acyl-phospholipid synthase [Frankia sp. CcI3]
Length = 306
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 7/77 (9%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--FA 129
+D+G G G + +++ V + ++ +++ + +V
Sbjct: 89 GGRVLDIGCGWGSLTLFMAVEY----EAEVVGVSPAGRQHAYIAQRAAELGVSDRVTTIQ 144
Query: 130 CRIQEAPQMITTCDVIS 146
+ + D ++
Sbjct: 145 GHFETVELPSGSFDAVT 161
>gi|254235205|ref|ZP_04928528.1| hypothetical protein PACG_01095 [Pseudomonas aeruginosa C3719]
gi|126167136|gb|EAZ52647.1| hypothetical protein PACG_01095 [Pseudomonas aeruginosa C3719]
Length = 316
Score = 34.3 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ L V A G + R
Sbjct: 138 RRAADIGCGAGPGAIRIAMACPDAE---VHGLDINPAALD-LARVNAALAGVGNLTLARS 193
Query: 133 QEAPQMITTCDVISA 147
Q D+I A
Sbjct: 194 DLLSQAPGRFDLIVA 208
>gi|302384472|ref|YP_003820294.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1]
gi|302195100|gb|ADL02671.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1]
Length = 245
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L F L +DLG+G G I + + +G +E + A R V
Sbjct: 37 LSGFALVKPGEKAVDLGTGTGI--IPL-LLEAKNQGIHYTGLEIQEAMAEMARRSVALNH 93
Query: 123 A--RGKVFACRIQEAPQMIT--TCDVISA 147
+ + I+EA ++ + DV+++
Sbjct: 94 LEEKITIVTGDIKEASRLFGAASFDVVTS 122
>gi|282915864|ref|ZP_06323629.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus D139]
gi|283769697|ref|ZP_06342589.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus H19]
gi|282320160|gb|EFB50505.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus D139]
gi|283459844|gb|EFC06934.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
aureus subsp. aureus H19]
Length = 202
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ HP D+G G G G++ + + +++ ++ + + +
Sbjct: 53 LKTHPPGPSKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVEKNKKLNGI 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ + + D I
Sbjct: 110 DNVIVKESDALSAVEDKSFDFI 131
>gi|228963201|ref|ZP_04124370.1| hypothetical protein bthur0004_920 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228796459|gb|EEM43898.1| hypothetical protein bthur0004_920 [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 199
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 50 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 103 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 136
>gi|194320097|pdb|3DH0|A Chain A, Crystal Structure Of A Sam Dependent Methyltransferase
From Aquifex Aeolicus
gi|194320098|pdb|3DH0|B Chain B, Crystal Structure Of A Sam Dependent Methyltransferase
From Aquifex Aeolicus
Length = 219
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 18/101 (17%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSI-----EGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+G+G GF L + E G V I+ + + ++ V K
Sbjct: 35 LKEGMTVLDVGTGAGF-------YLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL 87
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ +V + P T D I A T E S P
Sbjct: 88 KNVEVLKSEENKIPLPDNTVDFIFM-AF----TFHELSEPL 123
>gi|187778707|ref|ZP_02995180.1| hypothetical protein CLOSPO_02302 [Clostridium sporogenes ATCC
15579]
gi|187772332|gb|EDU36134.1| hypothetical protein CLOSPO_02302 [Clostridium sporogenes ATCC
15579]
Length = 230
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+++G G G ++ ++ EG V I+ + + QK +GK
Sbjct: 45 KILEVGCGAG-----NNLWFAAREGFNVTGIDISESVIDYAKKRFQKDELKGKFIVGNFD 99
Query: 134 EAPQMITTCDVISARA 149
E + D+I RA
Sbjct: 100 EIANLKEKFDLIIDRA 115
>gi|172040576|ref|YP_001800290.1| putative transferase [Corynebacterium urealyticum DSM 7109]
gi|171851880|emb|CAQ04856.1| putative transferase [Corynebacterium urealyticum DSM 7109]
Length = 589
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 24/94 (25%), Gaps = 16/94 (17%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF-------LRYVVQ 119
P P +DLG GGG + + V + + F L
Sbjct: 207 PWLPSPRRILDLGCGGGALSLALQLAYPEAH---VVGTDISGRALDFAAINGTQLAQAQG 263
Query: 120 KTAARGKVFACRIQEAPQMI------TTCDVISA 147
+ + I+ D+I +
Sbjct: 264 QLSTGVAAPESCIEWREGSWFEPVAGERFDLIVS 297
>gi|148272716|ref|YP_001222277.1| hypothetical protein CMM_1535 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830646|emb|CAN01582.1| unnamed protein product [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 240
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL---VNLIESKNKKASFLRYVVQ 119
+R + +D+GSGGG + ++ + GL V I+ + A+F +
Sbjct: 49 IRPLLSAERETTLLDIGSGGG--DVPLALARWARRDGLRLRVTGIDPDPRAAAFAG--AR 104
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
A + D++++
Sbjct: 105 PRDPDVAFLASSSGDLVAAGRRFDLVTS 132
>gi|326433542|gb|EGD79112.1| arginine N-methyltransferase [Salpingoeca sp. ATCC 50818]
Length = 443
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + + +++G+G G ++ +S V IE+ A+ R +++
Sbjct: 145 ALARQVKPGDVVLEIGTGSGL----LAMLAASAGAKHVYTIEANRHLAALARKIIRANNL 200
Query: 124 RGKV-----FACRIQEAPQMITTCDVISA 147
+ K+ + + CDV+ +
Sbjct: 201 QDKITVINKLSTNVHVGHDFPERCDVLVS 229
>gi|324992932|gb|EGC24852.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
SK405]
gi|325687438|gb|EGD29459.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
SK72]
Length = 276
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 44/147 (29%), Gaps = 31/147 (21%)
Query: 20 NVSRETLEKLEY-------------------FYFLFLKWSKKINLVSSSTVEDFWIRHVE 60
VS+E E+L+ F+ L LK +++ L+ E+
Sbjct: 46 EVSQEDREQLKAIQEQLLAHKPAQYIIGSSDFHGLTLKVDERV-LIPRPETEELVE---- 100
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + + +D+G+G G + + + + + S Q
Sbjct: 101 --LILSENRESSLSILDIGTGSGAIALTLANSRPDWQ---ITASDLSGDALSLATENAQS 155
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
EA + D+I +
Sbjct: 156 CGLSLTFIQSDCFEA--ISGNFDIIVS 180
>gi|323975923|gb|EGB71018.1| methyltransferase domain-containing protein [Escherichia coli
TW10509]
Length = 256
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|270157825|ref|ZP_06186482.1| biotin biosynthesis protein BioC [Legionella longbeachae D-4968]
gi|289163909|ref|YP_003454047.1| biotin synthase BioC [Legionella longbeachae NSW150]
gi|269989850|gb|EEZ96104.1| biotin biosynthesis protein BioC [Legionella longbeachae D-4968]
gi|288857082|emb|CBJ10897.1| biotin synthase BioC [Legionella longbeachae NSW150]
Length = 285
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 14/81 (17%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSS-----IEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
P +DLG G GF + ++ + L++++ KK S+ R R
Sbjct: 43 PQRILDLGCGPGFFSQELARMYPKAQVVGLDLAQIMLVQAR-KKQSWRR--------RWS 93
Query: 127 VFACRIQEAPQMITTCDVISA 147
+ A +Q P + D++ A
Sbjct: 94 LVAADMQRMPFADGSFDLVFA 114
>gi|218703459|ref|YP_002410978.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli UMN026]
gi|293403289|ref|ZP_06647380.1| yafE protein [Escherichia coli FVEC1412]
gi|298378903|ref|ZP_06988784.1| SAM-dependent methyltransferase [Escherichia coli FVEC1302]
gi|300900034|ref|ZP_07118231.1| methyltransferase domain protein [Escherichia coli MS 198-1]
gi|331661580|ref|ZP_08362503.1| putative biotin synthesis protein [Escherichia coli TA143]
gi|218430556|emb|CAR11422.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli UMN026]
gi|284919980|emb|CBG33035.1| putative methyltransferase [Escherichia coli 042]
gi|291429142|gb|EFF02162.1| yafE protein [Escherichia coli FVEC1412]
gi|298280016|gb|EFI21520.1| SAM-dependent methyltransferase [Escherichia coli FVEC1302]
gi|300356439|gb|EFJ72309.1| methyltransferase domain protein [Escherichia coli MS 198-1]
gi|331060002|gb|EGI31966.1| putative biotin synthesis protein [Escherichia coli TA143]
Length = 256
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|145629733|ref|ZP_01785529.1| HemK [Haemophilus influenzae 22.1-21]
gi|144978070|gb|EDJ87849.1| HemK [Haemophilus influenzae 22.1-21]
Length = 264
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITS-----IQLSSIEGGLVNLIESKNKKASFLRY 116
SL + +P +DLG+G G + + I + ++ + +
Sbjct: 81 SLEKLEQNPPHFRILDLGTGTGAIALALASELFSICQKRQISLEIIGVDLMPDVVALAQS 140
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ + R + + D+I +
Sbjct: 141 NAERNQLNVQFLQSRWFD--NITGKFDLIVS 169
>gi|39998409|ref|NP_954360.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
PCA]
gi|39985356|gb|AAR36710.1| ribosomal protein L11 methyltransferase, putative [Geobacter
sulfurreducens PCA]
gi|298507353|gb|ADI86076.1| methyltransferase, putative [Geobacter sulfurreducens KN400]
Length = 198
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 76 IDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA 135
+DLGSG G I +I + V ++ K A+ V+ +VF + A
Sbjct: 66 LDLGSGTG----ILAIAAVRLGAASVVAVDIDPKAAASCAANVRLNGVADRVFTVCGELA 121
Query: 136 PQMITTCDVISA 147
D++ A
Sbjct: 122 SVGRGLYDLLMA 133
>gi|33860728|ref|NP_892289.1| Mg-protoporphyrin IX methyl transferase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633670|emb|CAE18627.1| Mg-protoporphyrin IX methyltransferase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 233
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 15/93 (16%)
Query: 73 SIWIDLGSGGGFPGIIT-SIQLSSIEGGLV--NLIESKNKKASFLRYVVQKTAARGKVFA 129
+ D G G G I + + ++ + +I K+ + + +
Sbjct: 65 KTFCDAGCGVGSLAIPLLRLGIKDLQVSDISSEMINETKKRIN-------ELGLSQRKIK 117
Query: 130 CRIQEAPQMITTCDVISARALADLDTLLEYSFP 162
+ Q+ DV+ LD + Y P
Sbjct: 118 FLTSDLEQLKGLFDVVIC-----LDVFIHYPQP 145
>gi|116670026|ref|YP_830959.1| methyltransferase small [Arthrobacter sp. FB24]
gi|116610135|gb|ABK02859.1| 16S rRNA m(2)G 1207 methyltransferase [Arthrobacter sp. FB24]
Length = 204
Score = 34.3 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 8/85 (9%), Positives = 21/85 (24%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L +D+G G G + +++ V ++ + +
Sbjct: 51 LADVPAPSPQGNLLDIGCGWGPIALTMALRAPHSH---VYAVDVNERCVALTNENAGLLG 107
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + D I +
Sbjct: 108 LNN--VTASLPDDVDPGLRFDTIWS 130
>gi|323699818|ref|ZP_08111730.1| Methyltransferase type 11 [Desulfovibrio sp. ND132]
gi|323459750|gb|EGB15615.1| Methyltransferase type 11 [Desulfovibrio desulfuricans ND132]
Length = 209
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA---RGKVFA 129
+D+G+G G I+LS I + ++ + + +R ++ R +
Sbjct: 39 KNVLDVGTGNG----ALLIELSKITDMELTGLDLREQVLDRVRENMRSHGVEPQRISLIQ 94
Query: 130 CRIQEAPQMITTCDVISAR 148
+ + P + D+I +R
Sbjct: 95 GDVADMPLPDESFDLIISR 113
>gi|312958851|ref|ZP_07773370.1| modification methylase [Pseudomonas fluorescens WH6]
gi|311286621|gb|EFQ65183.1| modification methylase [Pseudomonas fluorescens WH6]
Length = 276
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+L P P+ +DLG+G G + + + + V ++ + + Q+
Sbjct: 100 AALELLPATPTRVLDLGTGSGAIALALASERPAWH---VTAVDRVLEAVALAERNRQRLH 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + D+I +
Sbjct: 157 LHNAMVLNSHWFSALQGHRYDLIIS 181
>gi|297560583|ref|YP_003679557.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296845031|gb|ADH67051.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 496
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
Query: 64 RVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +L P P + D+G+G G GI S V E+ ++A+ + +
Sbjct: 335 ALARLAPSPGQHLWDVGAGAGSVGIEWMRAHPSCTATAV---EAHPERAARIGRNAGRLG 391
Query: 123 ARG-KVFACRIQEAPQMITTCDVI 145
G V R +A + D +
Sbjct: 392 VPGLDVVTGRAPDALAGLPAPDAV 415
>gi|296389401|ref|ZP_06878876.1| hypothetical protein PaerPAb_14676 [Pseudomonas aeruginosa PAb1]
Length = 316
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ L V A G + R
Sbjct: 138 RRAADIGCGAGPGAIRIAMACPDAE---VHGLDINPAALD-LARVNAALAGVGNLTLARS 193
Query: 133 QEAPQMITTCDVISA 147
Q D+I A
Sbjct: 194 DLLSQAPGRFDLIVA 208
>gi|301096065|ref|XP_002897131.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107450|gb|EEY65502.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 329
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 59 VEDSL-RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
D + V P +I+ DLGSG G I S+ + + L+E A +
Sbjct: 137 FADIIRWVAPFLPDFAIFYDLGSGTGKAVIAASLVHPFDQAIGIELLEPLAHCAEKRKTA 196
Query: 118 VQKT 121
++K
Sbjct: 197 LEKL 200
>gi|288942500|ref|YP_003444740.1| methyltransferase small [Allochromatium vinosum DSM 180]
gi|288897872|gb|ADC63708.1| methyltransferase small [Allochromatium vinosum DSM 180]
Length = 196
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 16/135 (11%)
Query: 21 VSRETLEKLEY---FYFLF----LKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPS 73
++ E L L F L++ L S +++ R + D L +
Sbjct: 2 LTPEQLAGLRRDIQFSAQLGGRTLEFRSTWGLFSPREIDEG-TRLLLDHLHIEP----GD 56
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFACRI 132
+DLG G G G+ + G L++ + + +
Sbjct: 57 DCLDLGCGYGPIGLTLAALAP---LGRTLLVDKDFVAVDYANRNARLNRLDNAEARLSNG 113
Query: 133 QEAPQMITTCDVISA 147
+ + D+I++
Sbjct: 114 FDQIEPERRFDLIAS 128
>gi|225569190|ref|ZP_03778215.1| hypothetical protein CLOHYLEM_05272 [Clostridium hylemonae DSM
15053]
gi|225161989|gb|EEG74608.1| hypothetical protein CLOHYLEM_05272 [Clostridium hylemonae DSM
15053]
Length = 385
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D +D+G G GF + + + + + S+ + A F +
Sbjct: 150 VEHILD----KMYLEEGMTVLDIGCGWGF---LLKHAVKNYGVKGIGITLSREQYAKFRK 202
Query: 116 YVVQK-TAARGKVFACRIQEAPQMITTCDVISA 147
+ ++ R V +E + D + +
Sbjct: 203 DIEEEGLGDRLDVRLMDYRELKASGLSFDRVVS 235
>gi|107101605|ref|ZP_01365523.1| hypothetical protein PaerPA_01002649 [Pseudomonas aeruginosa PACS2]
Length = 316
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ L V A G + R
Sbjct: 138 RRAADIGCGAGPGAIRIAMACPDAE---VHGLDINPAALD-LARVNAALAGVGNLTLARS 193
Query: 133 QEAPQMITTCDVISA 147
Q D+I A
Sbjct: 194 DLLSQAPGRFDLIVA 208
>gi|15597375|ref|NP_250869.1| hypothetical protein PA2179 [Pseudomonas aeruginosa PAO1]
gi|218891868|ref|YP_002440735.1| putative methylase [Pseudomonas aeruginosa LESB58]
gi|9948200|gb|AAG05567.1|AE004645_1 hypothetical protein PA2179 [Pseudomonas aeruginosa PAO1]
gi|218772094|emb|CAW27873.1| putative methylase [Pseudomonas aeruginosa LESB58]
Length = 316
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ L V A G + R
Sbjct: 138 RRAADIGCGAGPGAIRIAMACPDAE---VHGLDINPAALD-LARVNAALAGVGNLTLARS 193
Query: 133 QEAPQMITTCDVISA 147
Q D+I A
Sbjct: 194 DLLSQAPGRFDLIVA 208
>gi|312964728|ref|ZP_07778979.1| methyltransferase domain protein [Escherichia coli 2362-75]
gi|312290749|gb|EFR18627.1| methyltransferase domain protein [Escherichia coli 2362-75]
Length = 235
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + +
Sbjct: 15 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSTVVAYDLSAHMLDVVAQAAEARQ 69
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ ++ P D++ +R
Sbjct: 70 LKNITTRQGYVESLPFADNAFDIVISR 96
>gi|307544473|ref|YP_003896952.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Halomonas elongata DSM 2581]
gi|307216497|emb|CBV41767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Halomonas elongata DSM 2581]
Length = 282
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ ++ +DLG+G G + + + ++L + R ++
Sbjct: 103 AALSRMPARAGRLLDLGTGSGAVALALASERPDWYALGIDL---NPGAVALARRNAERLG 159
Query: 123 ARGKVFACRIQE--APQMITTCDVISA 147
F R+ + A + DVI A
Sbjct: 160 IANVGF--RVGDWFAALDESDFDVIVA 184
>gi|303237047|ref|ZP_07323617.1| NOL1/NOP2/sun family protein [Prevotella disiens FB035-09AN]
gi|302482434|gb|EFL45459.1| NOL1/NOP2/sun family protein [Prevotella disiens FB035-09AN]
Length = 453
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 8/95 (8%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASF 113
++ HV Q +P +DL + G + S +V E K+A
Sbjct: 107 MFLAHVL-----RQFVHFPVALLDLCAAPGGKTTCARTAIPS--ESIVFSNEPMGKRAQI 159
Query: 114 LRYVVQKTAARGKVFACRI-QEAPQMITTCDVISA 147
L VQK V E + DVI A
Sbjct: 160 LAENVQKFGHPDVVVTNNYPIEYKKTKLKFDVIVA 194
>gi|300717709|ref|YP_003742512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Erwinia billingiae Eb661]
gi|299063545|emb|CAX60665.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Erwinia billingiae Eb661]
Length = 310
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P +D+ +G G I + E V+ ++ + ++ V
Sbjct: 129 IPDEPKYILDMCTGSGCIAIACAYAFPDAE---VDAVDISTDALAVTEQNIEAHGLTHSV 185
Query: 128 FACRIQEAPQM-ITTCDVIS 146
R ++ T D+I
Sbjct: 186 TPIRADLFRELPKTPYDLIV 205
>gi|228991705|ref|ZP_04151645.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442]
gi|228997806|ref|ZP_04157410.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17]
gi|229005345|ref|ZP_04163059.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4]
gi|228755875|gb|EEM05206.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4]
gi|228761938|gb|EEM10880.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17]
gi|228768028|gb|EEM16651.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442]
Length = 264
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA-CRI 132
+D+ +GGG + + V ++ K + +Q F
Sbjct: 47 RLLDIATGGGHVANLLAPIFKE-----VVALDLTEKMLEKAKAFIQTNGHENVSFVVGNA 101
Query: 133 QEAPQMITTCDVISAR 148
++ P + D I R
Sbjct: 102 EDLPFSNQSFDTIICR 117
>gi|229167437|ref|ZP_04295175.1| hypothetical protein bcere0007_24000 [Bacillus cereus AH621]
gi|228615999|gb|EEK73086.1| hypothetical protein bcere0007_24000 [Bacillus cereus AH621]
Length = 234
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 75 WIDLGSGGGFPGIITS--IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA--RGKVFAC 130
+DLGSG G I + I S V+L++S K L+ ++ K
Sbjct: 53 ILDLGSGVGRNSIPIAQKIMNSGGTVTCVDLLDSALMK---LQVYSKEYGVFEYIKTEQA 109
Query: 131 RIQEAPQMITTCDVISARALADLD 154
I++ T D I A++ L+
Sbjct: 110 AIEDYYIAPNTYDYIV--AVSSLE 131
>gi|238854674|ref|ZP_04645004.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
269-3]
gi|260664383|ref|ZP_05865235.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
SJ-7A-US]
gi|282932935|ref|ZP_06338332.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
208-1]
gi|238832464|gb|EEQ24771.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
269-3]
gi|260561448|gb|EEX27420.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
SJ-7A-US]
gi|281302970|gb|EFA95175.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
208-1]
Length = 314
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ + + P +D+G+G G I +I S + V + ++ + +
Sbjct: 168 MALERSLTKPVKVLDVGTGSG----ILAIAASKLGAKSVLATDISDEAVTAANENIALNK 223
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + + D+I A
Sbjct: 224 LNN-IEVIKANLLKDVDGKFDLILA 247
>gi|222109994|ref|YP_002552258.1| type 12 methyltransferase [Acidovorax ebreus TPSY]
gi|221729438|gb|ACM32258.1| Methyltransferase type 12 [Acidovorax ebreus TPSY]
Length = 280
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 22/74 (29%), Gaps = 5/74 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
DLG+G G + + + V +++ + R + +
Sbjct: 115 RVADLGTGSGAIALALQHERPDAQ---VLAVDASADALAVARANAGQLGLPVRFIQGNW- 170
Query: 134 EAPQMITTCDVISA 147
+ + D I +
Sbjct: 171 -LHGVDGSFDAIVS 183
>gi|212638680|ref|YP_002315200.1| ribosomal protein L11 methyltransferase [Anoxybacillus flavithermus
WK1]
gi|226707856|sp|B7GKD0|PRMA_ANOFW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|212560160|gb|ACJ33215.1| Ribosomal protein L11 methylase [Anoxybacillus flavithermus WK1]
Length = 312
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 10/101 (9%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D+G+G G I SI + + V+ ++ + V+
Sbjct: 168 ALEKTVKKGDTVVDVGTGSG----ILSIAAAMLGAKRVHALDLDPVAVESAKLNVKLNKV 223
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V + +M DVI A + L E ++
Sbjct: 224 HDVVTVSQNNLLDRMDEQADVIVA------NILAEIILRFV 258
>gi|297585060|ref|YP_003700840.1| methyltransferase type 11 protein [Bacillus selenitireducens MLS10]
gi|297143517|gb|ADI00275.1| Methyltransferase type 11 [Bacillus selenitireducens MLS10]
Length = 191
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
DS+ IDLGSG G I + G V ++ + + L V++
Sbjct: 26 DSIVAKLDIQKKMNIIDLGSGNGLFTIPLA----EKTSGDVYAVDVEPEMLGILSARVEE 81
Query: 121 TAARGK-VFACRIQEAPQMITTCDVISARAL 150
++E D ++ RA+
Sbjct: 82 YGLENVGYVQADLEEVSLG----DAVAERAV 108
>gi|152985516|ref|YP_001350834.1| hypothetical protein PSPA7_5512 [Pseudomonas aeruginosa PA7]
gi|150960674|gb|ABR82699.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 249
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 15/108 (13%)
Query: 65 VFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + P P +D+G+G G + + G V L E R +
Sbjct: 34 LAEALPQRPLRVLDIGAGLGHMSLWLA-----TRGHRVTLAEPALPMLDGARQRFAEAGQ 88
Query: 124 RGKVFACRIQEAP-QMITTCDVISARAL--------ADLDTLLEYSFP 162
+ QE P Q+ D++ A+ A L L P
Sbjct: 89 AAEFIQAPWQELPGQLTEPYDLVLCHAVLEWLAEPHAILPVLHRLCAP 136
>gi|157156387|ref|YP_001461375.1| UbiE/COQ5 family methlytransferase [Escherichia coli E24377A]
gi|218693672|ref|YP_002401339.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli 55989]
gi|157078417|gb|ABV18125.1| methyltransferase, UbiE/COQ5 family [Escherichia coli E24377A]
gi|218350404|emb|CAU96089.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli 55989]
Length = 256
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|145639101|ref|ZP_01794709.1| HemK [Haemophilus influenzae PittII]
gi|145272073|gb|EDK11982.1| HemK [Haemophilus influenzae PittII]
gi|309751052|gb|ADO81036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Haemophilus influenzae R2866]
Length = 292
Score = 34.3 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITS-----IQLSSIEGGLVNLIESKNKKASFLRY 116
SL + +P +DLG+G G + + I + ++ + +
Sbjct: 109 SLEKLEQNPPHFRILDLGTGTGAIALALASELFSICQKRQISLEIIGVDLMPDVVALAQS 168
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ + R + + D+I +
Sbjct: 169 NAERNQLNVQFLQSRWFD--NITGKFDLIVS 197
>gi|332522818|ref|ZP_08399070.1| ribosomal RNA large subunit methyltransferase A family protein
[Streptococcus porcinus str. Jelinkova 176]
gi|332314082|gb|EGJ27067.1| ribosomal RNA large subunit methyltransferase A family protein
[Streptococcus porcinus str. Jelinkova 176]
Length = 273
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 12/122 (9%)
Query: 30 EYFYFLFL--KWSKKIN---LVSSSTVEDF-WIRHVEDSLRVFQLHPYPSIWIDLGSGGG 83
+ + L L K N + S + + + RH+ +++ + + +D+ G G
Sbjct: 40 QGYANLLLNAKKDAHYNKESFIRRSHILEAGYYRHILEAISSYLQPDKNTTILDVACGEG 99
Query: 84 FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
+ + Q + + +L K S L + R F + + P + D
Sbjct: 100 YYSRALA-QTPNHQILAFDLS-----KESILLAAKKDLLNRVTWFVGDLAKLPLADQSVD 153
Query: 144 VI 145
+I
Sbjct: 154 II 155
>gi|319638153|ref|ZP_07992916.1| hypothetical protein HMPREF0604_00539 [Neisseria mucosa C102]
gi|317400426|gb|EFV81084.1| hypothetical protein HMPREF0604_00539 [Neisseria mucosa C102]
Length = 371
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D + L P D+G+G G + + L+ + ++ K + ++
Sbjct: 181 LDLIAQAPLAPNIQTAFDIGTGSG----VIAAILAKRGIPDIIATDTNPKAIACATANLE 236
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ V I P+ T D+I
Sbjct: 237 RLGLDKAVNIQSIDLFPE--TCADLIVC 262
>gi|282163493|ref|YP_003355878.1| hypothetical protein MCP_0823 [Methanocella paludicola SANAE]
gi|282155807|dbj|BAI60895.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 296
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 9/82 (10%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
L P + +D+G G G ++ G V I+ + L V K +G
Sbjct: 52 IPLLPQGARVLDIGCGTGQQTLLF-----DKSGFDVVGIDISH----GLVKVANKKLGKG 102
Query: 126 KVFACRIQEAPQMITTCDVISA 147
A P D IS+
Sbjct: 103 VCMASDACRLPFPDECFDAISS 124
>gi|257081919|ref|ZP_05576280.1| modification methylase HemK [Enterococcus faecalis E1Sol]
gi|256989949|gb|EEU77251.1| modification methylase HemK [Enterococcus faecalis E1Sol]
Length = 277
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
++L E + + + A + +
Sbjct: 139 IAIDLSEE---ALTVAKQNAKVLGADIEFYHG 167
>gi|240273613|gb|EER37133.1| TAM domain methyltransferase [Ajellomyces capsulatus H143]
gi|325087513|gb|EGC40823.1| TAM domain methyltransferase [Ajellomyces capsulatus H88]
Length = 334
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 17/103 (16%)
Query: 55 WIRHVE------DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
H+ D + + + P P +D+G+G G I + + V +
Sbjct: 74 LTHHIYKLLLGGD-IYISPIKPNPQRVLDIGTGTGIWAIDFADAHPESQ---VVGNDLSP 129
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALA 151
+ S++ ++ A D I AR LA
Sbjct: 130 IQPSWV-------PTNCVFEIDDLEAAWPYTRPFDFIHARELA 165
>gi|237753270|ref|ZP_04583750.1| ribosomal protein L11 methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
gi|229375537|gb|EEO25628.1| ribosomal protein L11 methyltransferase [Helicobacter winghamensis
ATCC BAA-430]
Length = 278
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 20/141 (14%)
Query: 36 FLKWSKKINLVSSSTVEDFWI--RHV--EDSLRVFQ-LHPYPSIWIDLGSGGGFPGIITS 90
+ K + KIN+ + H L+ L +D+G G G I S
Sbjct: 108 YAKKNNKINV--IIDPALAFGSGHHASTFGCLKALDALELQNKKVLDVGCGSG----ILS 161
Query: 91 IQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKVFACRIQEAPQMITTCDVISARA 149
I + G +V ++ + ++K +VF + PQ + D++ A
Sbjct: 162 IC-AKKSGAIVWACDTDEVAVDSTKENMRKNGVVLDQVFLGSLHVIPQNKESFDIVLANL 220
Query: 150 LADLDTLLEYSFP---WLYQK 167
LAD+ + P ++ ++
Sbjct: 221 LADIIV----ALPLRDFVKKE 237
>gi|213967732|ref|ZP_03395879.1| biotin synthesis protein BioC [Pseudomonas syringae pv. tomato T1]
gi|301382369|ref|ZP_07230787.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. tomato
Max13]
gi|302062360|ref|ZP_07253901.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. tomato
K40]
gi|302130678|ref|ZP_07256668.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213927508|gb|EEB61056.1| biotin synthesis protein BioC [Pseudomonas syringae pv. tomato T1]
Length = 269
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLG G G+ + S EG +++ E LR+ Q
Sbjct: 45 LSRLPAGFTPSRWLDLGCGTGYFSRALARTFSQSEGIALDIAEGM------LRHA-QPFG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P C++I + L ++ +
Sbjct: 98 GAQHFVAGDAEHLPLRDERCELI----FSSLAV--QWCADF 132
>gi|114570810|ref|YP_757490.1| 3-demethylubiquinone-9 3-methyltransferase [Maricaulis maris MCS10]
gi|122315458|sp|Q0AME1|UBIG_MARMM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|114341272|gb|ABI66552.1| 3-demethylubiquinone-9 3-methyltransferase [Maricaulis maris MCS10]
Length = 254
Score = 34.3 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 6/76 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G GGG + + + G V+ E+ K AS +
Sbjct: 68 EGLRILDIGCGGGLVCEPMARLGAHVTG--VDAAEANIKTASVH---ADEQGLEIDYRHG 122
Query: 131 RIQEA-PQMITTCDVI 145
++ Q DV+
Sbjct: 123 VAEQLIEQDEAPFDVV 138
>gi|332668218|ref|YP_004451006.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
[Haliscomenobacter hydrossis DSM 1100]
gi|332337032|gb|AEE54133.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
[Haliscomenobacter hydrossis DSM 1100]
Length = 241
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 8/85 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSS-IEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P +D+ +G +I ++ ++ + ++ K R V+ V
Sbjct: 53 QDQPQRILDIATGTA----DLAIAMAEKLQPQEIIGVDIAPKMLEIGRVKVRDKGLNKIV 108
Query: 128 F--ACRIQEAPQMITTCDVISARAL 150
QE DV++A A
Sbjct: 109 HLEDGDSQELRFPDNQFDVVTA-AF 132
>gi|315168547|gb|EFU12564.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX1341]
Length = 277
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|283477104|emb|CAY73004.1| Ribosomal RNA small subunit methyltransferase [Erwinia pyrifoliae
DSM 12163]
Length = 447
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 31/147 (21%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
DSNS A+ + Y + L T+ + R D S
Sbjct: 253 DSNSTFDADAFWDEYPLGE---------------------LT-VKTLPGVFSRDGLDIGS 290
Query: 63 -LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + L P+ +D+G G G + + + + L + + + +
Sbjct: 291 QLLLSTLKPHMKGKVLDMGCGAGVLSAMLASFSPKVR---LTLTDVNAAAIASSKATLTA 347
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
G VFA + + D+I +
Sbjct: 348 NQLEGDVFASNV--YSDISGRFDMIIS 372
>gi|284989150|ref|YP_003407704.1| type 11 methyltransferase [Geodermatophilus obscurus DSM 43160]
gi|284062395|gb|ADB73333.1| Methyltransferase type 11 [Geodermatophilus obscurus DSM 43160]
Length = 247
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P +D+G G G ++ + + + V+L E ++ R Q
Sbjct: 29 LELTAPLPASRRALDIGCGPGRASLVLA--GAGVRVTAVDLHEPFLRRT---RSAAQDAG 83
Query: 123 ARGKVFACRI 132
G+V R
Sbjct: 84 LAGRVAVERA 93
>gi|227519761|ref|ZP_03949810.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterococcus faecalis TX0104]
gi|227072849|gb|EEI10812.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterococcus faecalis TX0104]
Length = 277
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|170723994|ref|YP_001751682.1| biotin biosynthesis protein BioC [Pseudomonas putida W619]
gi|169761997|gb|ACA75313.1| biotin biosynthesis protein BioC [Pseudomonas putida W619]
Length = 272
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 12/98 (12%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
PS W+DLGSG G + + + + G V++ E LR+ +
Sbjct: 48 LPDALTPSRWLDLGSGTGHFSRVLAERFTPATGVAVDIAEGM------LRHARSEQGGAR 101
Query: 126 KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P + D++ + L ++ +
Sbjct: 102 YHVAGDAERLPLRDHSVDLV----FSSLAV--QWCAQF 133
>gi|196032007|ref|ZP_03099421.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus W]
gi|218904009|ref|YP_002451843.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus AH820]
gi|228915486|ref|ZP_04079075.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228934157|ref|ZP_04096996.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228946498|ref|ZP_04108814.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|195994758|gb|EDX58712.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus W]
gi|218539882|gb|ACK92280.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus AH820]
gi|228813176|gb|EEM59481.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228825325|gb|EEM71119.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228844133|gb|EEM89193.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 261
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ + +D+ +GGG + + + ++L E + A ++++ A
Sbjct: 41 HNNRLLDIATGGGHVANVLAPLFKEV--VALDLTEKMLENAK--KFIISNGHENVSFVAG 96
Query: 131 RIQEAPQMITTCDVISAR 148
+ P ++ D I+ R
Sbjct: 97 NAESLPFSDSSFDTITCR 114
>gi|18418151|ref|NP_567912.1| coclaurine N-methyltransferase, putative [Arabidopsis thaliana]
gi|22531140|gb|AAM97074.1| putative protein [Arabidopsis thaliana]
gi|332660774|gb|AEE86174.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
gi|332660775|gb|AEE86175.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 355
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + I + L + SK +KA F+ +K +
Sbjct: 127 VEDGQSVLDIGCGWG--SLSLYIARKYSKCKLTGICNSKTQKA-FIDEKCRKLGLQNIEI 183
Query: 129 ACRIQEAPQMITTCDVISA 147
+ T D I +
Sbjct: 184 IVADISTFEHEGTYDRIFS 202
>gi|319789313|ref|YP_004150946.1| ribosomal L11 methyltransferase [Thermovibrio ammonificans HB-1]
gi|317113815|gb|ADU96305.1| ribosomal L11 methyltransferase [Thermovibrio ammonificans HB-1]
Length = 266
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 9/84 (10%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-A 123
+ +L ++D+G G G I SI + + V + + L+ +++
Sbjct: 129 IKKLLKEGDSFLDVGCGSG----ILSILAAKLGASEVVGCDIQPN----LQEEIEENQRL 180
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
G F + D++ A
Sbjct: 181 NGIEFTFVEGSVNAVNGKFDLVVA 204
>gi|303252523|ref|ZP_07338686.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307247272|ref|ZP_07529321.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307260746|ref|ZP_07542435.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|302648491|gb|EFL78684.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306856245|gb|EFM88399.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306869585|gb|EFN01373.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 234
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + G V I+ +
Sbjct: 30 HLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMARA-----GATVTGIDMTTEPLE 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
R ++ I++ Q DVI+
Sbjct: 85 VARKHAEENGLSIDYRQTTIEDFVQNQTACHAEKFDVITC 124
>gi|257416747|ref|ZP_05593741.1| modification methylase HemK [Enterococcus faecalis AR01/DG]
gi|257158575|gb|EEU88535.1| modification methylase HemK [Enterococcus faecalis ARO1/DG]
Length = 277
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|222100868|ref|YP_002535436.1| Methyltransferase type 11 [Thermotoga neapolitana DSM 4359]
gi|221573258|gb|ACM24070.1| Methyltransferase type 11 [Thermotoga neapolitana DSM 4359]
Length = 216
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 8/90 (8%)
Query: 62 SLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL V+ P ++LGSG G G + G V +E + + +
Sbjct: 27 SLLVWYAKPSKGVKRVLELGSGVGTVGFALARLY----GVEVVGVEKEKELYEKAVQGIS 82
Query: 120 KTAARGKV--FACRIQEAPQMITTCDVISA 147
GKV +++ + D++ +
Sbjct: 83 LNGLEGKVSFVNASVEDCSFPPESFDMVVS 112
>gi|165975740|ref|YP_001651333.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|165875841|gb|ABY68889.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 245
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + G V I+ +
Sbjct: 41 HLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMARA-----GATVTGIDMTTEPLE 95
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
R ++ I++ Q DVI+
Sbjct: 96 VARKHAEENGLSIDYRQTTIEDFVQNQTACHAEKFDVITC 135
>gi|187479535|ref|YP_787560.1| methyltransferase [Bordetella avium 197N]
gi|115424122|emb|CAJ50675.1| putative methyltransferase [Bordetella avium 197N]
Length = 254
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +DLG GGG + V + + + +
Sbjct: 43 DARVLDLGCGGGHVSFHVA-----PRAAEVVAYDLSQSMLDVVAAEAARRGLNNLRTCQG 97
Query: 131 RIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 98 KAERLPFADGEFDLVMSR 115
>gi|82750249|ref|YP_415990.1| hypothetical protein SAB0492 [Staphylococcus aureus RF122]
gi|82655780|emb|CAI80180.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 202
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ HP D+G G G G++ + + +++ ++ + + +
Sbjct: 53 LKTHPPGPSKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVEKNKKLNGI 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ + + D I
Sbjct: 110 DNVIVKESDALSAVEDKSFDFI 131
>gi|32033662|ref|ZP_00133973.1| COG2227: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol
methylase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|126207773|ref|YP_001052998.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae L20]
gi|307256313|ref|ZP_07538096.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|166234757|sp|A3MZ07|UBIG_ACTP2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|126096565|gb|ABN73393.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|306865139|gb|EFM97039.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 234
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 15/100 (15%)
Query: 58 HVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
H+ + LR+ + + +D+G GGG + G V I+ +
Sbjct: 30 HLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMARA-----GATVTGIDMTTEPLE 84
Query: 113 FLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
R ++ I++ Q DVI+
Sbjct: 85 VARKHAEENGLSIDYRQTTIEDFVQNQTACHAEKFDVITC 124
>gi|116629510|ref|YP_814682.1| ribosomal protein L11 methylase [Lactobacillus gasseri ATCC 33323]
gi|311110846|ref|ZP_07712243.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
MV-22]
gi|122273552|sp|Q043X8|PRMA_LACGA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|116095092|gb|ABJ60244.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
[Lactobacillus gasseri ATCC 33323]
gi|311066000|gb|EFQ46340.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
MV-22]
Length = 315
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G I +I S + V + ++ + + +
Sbjct: 169 LAMERALVKPMSVLDIGTGSG----ILAIAASKLGASHVLGTDISDEAVTAAKENIALND 224
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D+I A LA D LLE
Sbjct: 225 VNNINVR-KANLLKDIDDKYDLIVANILA--DILLEL 258
>gi|330897669|gb|EGH29088.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae pv. japonica str. M301072PT]
gi|330940028|gb|EGH43220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 302
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI + E V L + +++ +
Sbjct: 121 WLADEPARILDLCTGSGCIGIACAEVFPDAE---VALADLSYDALEVANQNIERHGMEDR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFDGLPGQRFDLIVS 199
>gi|298244023|ref|ZP_06967830.1| rRNA (guanine-N(2)-)-methyltransferase [Ktedonobacter racemifer DSM
44963]
gi|297557077|gb|EFH90941.1| rRNA (guanine-N(2)-)-methyltransferase [Ktedonobacter racemifer DSM
44963]
Length = 342
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 9/91 (9%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKASFL 114
R + D+L V +DLG G GF G+ + G V +++ S A+
Sbjct: 185 TRLLLDALEVKP----TDQALDLGCGAGFIGLHIARL---ATRGQVTMVDVSLAAVATSR 237
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVI 145
+ ++ ++ D++
Sbjct: 238 QQAAEQGLTNVRILPSDGARVV-YTEQFDLV 267
>gi|258422612|ref|ZP_05685518.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257847184|gb|EEV71192.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|302332254|gb|ADL22447.1| methyltransferase small domain protein [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 202
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ HP D+G G G G++ + + +++ ++ + + +
Sbjct: 53 LKTHPPGPSKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVEKNKKLNGI 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ + + D I
Sbjct: 110 DNVIVKESDALSAVEDKSFDFI 131
>gi|223993545|ref|XP_002286456.1| methyl transferase-like protein [Thalassiosira pseudonana CCMP1335]
gi|220977771|gb|EED96097.1| methyl transferase-like protein [Thalassiosira pseudonana CCMP1335]
Length = 308
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLS------SIEGGLVNLIESKNKKASFL 114
D++ V +L S +D+GSG G P I S ++ + L E + +
Sbjct: 60 DAIEVMKL-DESSNVLDVGSGFGGPARILSSLSKCTTVALELQPDIHELAEDLTRSCNLS 118
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ V + G + + + D + +
Sbjct: 119 KLVKHEL---GDILNHDLDSLGSGTASFDAVVS 148
>gi|21593795|gb|AAM65762.1| coclaurine N-methyltransferase [Arabidopsis thaliana]
Length = 355
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + I + L + SK +KA F+ +K +
Sbjct: 127 VEDGQSVLDIGCGWG--SLSLYIARKYSKCKLTGICNSKTQKA-FIDEKCRKLGLQNIEI 183
Query: 129 ACRIQEAPQMITTCDVISA 147
+ T D I +
Sbjct: 184 IVADISTFEHEGTYDRIFS 202
>gi|53804791|ref|YP_113525.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath]
gi|53758552|gb|AAU92843.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath]
Length = 284
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFACRI 132
+DLG+G G + +++ E V++ ES A R+ A+ +
Sbjct: 116 RILDLGTGSGVIAVTLALECPDAEVWAVDVSESALAVA---RHNAAALGAKTVRFLRGDW 172
Query: 133 QEAPQMITTCDVISA 147
D+I +
Sbjct: 173 FAPLPADIRFDLIVS 187
>gi|313836078|gb|EFS73792.1| methyltransferase small domain protein [Propionibacterium acnes
HL037PA2]
gi|314929614|gb|EFS93445.1| methyltransferase small domain protein [Propionibacterium acnes
HL044PA1]
gi|314970610|gb|EFT14708.1| methyltransferase small domain protein [Propionibacterium acnes
HL037PA3]
gi|328906180|gb|EGG25955.1| methyltransferase small domain protein [Propionibacterium sp. P08]
Length = 206
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 23/78 (29%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ++DLG G G G V ++ + + +V A
Sbjct: 65 PSDGTFLDLGCGYGPIACALGRACP---GSRVVSVDVNDLAIDLTTRNAKALGVGDRVHA 121
Query: 130 CRIQEAPQMITTCDVISA 147
CR E D I +
Sbjct: 122 CRPDEV-DPDLRFDEIWS 138
>gi|312875748|ref|ZP_07735743.1| methyltransferase small domain protein [Lactobacillus iners LEAF
2053A-b]
gi|311088740|gb|EFQ47189.1| methyltransferase small domain protein [Lactobacillus iners LEAF
2053A-b]
Length = 204
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 LKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F +I
Sbjct: 111 ---DNVNIFCSDCYRNLDDQEQFGLI 133
>gi|149203822|ref|ZP_01880791.1| protein-L-isoaspartate O-methyltransferase [Roseovarius sp. TM1035]
gi|149142939|gb|EDM30981.1| protein-L-isoaspartate O-methyltransferase [Roseovarius sp. TM1035]
Length = 217
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ +D+GSG G+ + + V +E K + + + + A V
Sbjct: 76 IENDDLVLDIGSGYGYSAAVIARM-----AEAVVAVEDKASVVAEAQRTLSEQGADNVVL 130
Query: 129 A-CRIQEAPQMITTCDVIS 146
+ + DVI+
Sbjct: 131 HEGPLADGAPEHGPYDVIT 149
>gi|194432794|ref|ZP_03065079.1| methyltransferase, UbiE/COQ5 family [Shigella dysenteriae 1012]
gi|194419056|gb|EDX35140.1| methyltransferase, UbiE/COQ5 family [Shigella dysenteriae 1012]
gi|320179847|gb|EFW54793.1| methyltransferase domain protein [Shigella boydii ATCC 9905]
Length = 256
Score = 33.9 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|283469833|emb|CAQ49044.1| methyltransferase small domain superfamily [Staphylococcus aureus
subsp. aureus ST398]
Length = 202
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ HP D+G G G G++ + + +++ ++ + + +
Sbjct: 53 LKTHPPGPSKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVEKNKKLNGI 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ + + D I
Sbjct: 110 DNVIVKESDALSAVEDKSFDFI 131
>gi|257090699|ref|ZP_05585060.1| modification methylase hemK [Enterococcus faecalis CH188]
gi|312905240|ref|ZP_07764360.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0635]
gi|256999511|gb|EEU86031.1| modification methylase hemK [Enterococcus faecalis CH188]
gi|310631477|gb|EFQ14760.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0635]
gi|315579265|gb|EFU91456.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0630]
Length = 277
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|193077722|gb|ABO12580.2| methyl transferase [Acinetobacter baumannii ATCC 17978]
Length = 273
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + + V + + Q F
Sbjct: 104 LPKNANIVDLGTGTGAIALALASERPNW---FVTATDIYAPTLDVAKENAQTHGLHHVKF 160
Query: 129 ACRIQEAPQMITTCDVISA 147
AC D+I +
Sbjct: 161 ACGAWFEALEPQQFDLIVS 179
>gi|15606625|ref|NP_214005.1| hypothetical protein aq_1457 [Aquifex aeolicus VF5]
gi|2983854|gb|AAC07408.1| hypothetical protein aq_1457 [Aquifex aeolicus VF5]
Length = 210
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 18/101 (17%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSI-----EGGLVNLIESKNKKASFLRYVVQKTAA 123
+D+G+G GF L + E G V I+ + + ++ V K
Sbjct: 33 LKEGMTVLDVGTGAGF-------YLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL 85
Query: 124 RG-KVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
+ +V + P T D I A T E S P
Sbjct: 86 KNVEVLKSEENKIPLPDNTVDFIFM-AF----TFHELSEPL 121
>gi|116050122|ref|YP_791063.1| hypothetical protein PA14_36390 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585343|gb|ABJ11358.1| putative methylase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 316
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ L V A G + R
Sbjct: 138 RRAADIGCGAGPGAIRIAMACPDAE---VHGLDINPAALD-LARVNAALAGVGNLTLARS 193
Query: 133 QEAPQMITTCDVISA 147
Q D+I A
Sbjct: 194 DLLSQAPGRFDLIVA 208
>gi|47570083|ref|ZP_00240742.1| methyltransferase [Bacillus cereus G9241]
gi|47553244|gb|EAL11636.1| methyltransferase [Bacillus cereus G9241]
Length = 292
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 35/114 (30%), Gaps = 7/114 (6%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRV--FQLHPYPSIWIDLGSGGGFPGIITSIQLSS 95
W+ K L D + S V P +D G G G+ G++ L
Sbjct: 5 DWNSK--LTYLKNTRDLYYNDDYISFLVNTVWKISKPVHIVDYGCGYGYLGLVLMPLLP- 61
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARA 149
+G I+S + R + + E ++ T D+ A
Sbjct: 62 -KGSKYTGIDSGEALLAEARELFHLLPYESEFLEGDATEI-ELKDTYDIAICHA 113
>gi|330889872|gb|EGH22533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae pv. mori str. 301020]
Length = 302
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI + E V L + +++ +
Sbjct: 121 WLADEPARILDLCTGSGCIGIACAEVFPEAE---VALADLSYDALEVANQNIERHGMEDR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFDGLPGQRFDLIVS 199
>gi|301793981|emb|CBW36379.1| putative methyltransferase [Streptococcus pneumoniae INV104]
Length = 193
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + L + G +++ + R +K A+ +F
Sbjct: 52 VNQGETVLDVGCGYG----PLGLSLVKVYGVQATMVDINTRALDLARRNAEKNNAKATIF 107
Query: 129 ACRIQEAPQMITTCDVISA----RA 149
I Q+ D + + RA
Sbjct: 108 QSNI--YEQVEGHFDHVISNPPIRA 130
>gi|257421857|ref|ZP_05598847.1| protoporphyrinogen oxidase hemK [Enterococcus faecalis X98]
gi|257163681|gb|EEU93641.1| protoporphyrinogen oxidase hemK [Enterococcus faecalis X98]
gi|315155438|gb|EFT99454.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0043]
Length = 277
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|242371608|ref|ZP_04817182.1| HemK family methyltransferase [Staphylococcus epidermidis
M23864:W1]
gi|242350675|gb|EES42276.1| HemK family methyltransferase [Staphylococcus epidermidis
M23864:W1]
Length = 278
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 7/61 (11%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ + H +L +D+G+G G + + ++ +L
Sbjct: 90 LIPRPETEEVML-HFL------KLCRNKDGVVDIGTGSGAIAVTLKLLRPDLDVYATDLY 142
Query: 105 E 105
E
Sbjct: 143 E 143
>gi|218895236|ref|YP_002443647.1| ybxB protein [Bacillus cereus G9842]
gi|218542476|gb|ACK94870.1| ybxB protein [Bacillus cereus G9842]
Length = 199
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 50 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 103 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 136
>gi|91209278|ref|YP_539264.1| hypothetical protein UTI89_C0229 [Escherichia coli UTI89]
gi|117622492|ref|YP_851405.1| hypothetical protein APECO1_1780 [Escherichia coli APEC O1]
gi|218557146|ref|YP_002390059.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
coli S88]
gi|218688080|ref|YP_002396292.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli ED1a]
gi|237707796|ref|ZP_04538277.1| methyltransferase [Escherichia sp. 3_2_53FAA]
gi|91070852|gb|ABE05733.1| conserved hypothetical protein YafE [Escherichia coli UTI89]
gi|115511616|gb|ABI99690.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218363915|emb|CAR01580.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli S88]
gi|218425644|emb|CAR06431.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli ED1a]
gi|226899006|gb|EEH85265.1| methyltransferase [Escherichia sp. 3_2_53FAA]
gi|294489665|gb|ADE88421.1| methyltransferase, UbiE/COQ5 family [Escherichia coli IHE3034]
gi|307628309|gb|ADN72613.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli UM146]
gi|315289706|gb|EFU49099.1| methyltransferase domain protein [Escherichia coli MS 110-3]
gi|323948756|gb|EGB44656.1| methyltransferase domain-containing protein [Escherichia coli H252]
gi|323958794|gb|EGB54493.1| methyltransferase domain-containing protein [Escherichia coli H263]
Length = 256
Score = 33.9 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|330838434|ref|YP_004413014.1| Ribosomal protein L11 methyltransferase [Selenomonas sputigena ATCC
35185]
gi|329746198|gb|AEB99554.1| Ribosomal protein L11 methyltransferase [Selenomonas sputigena ATCC
35185]
Length = 313
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L D+G+G G + +I + + V ++ R V++ A
Sbjct: 166 ALEDLVRPGMTVFDVGTGSG----VLAIVAAKLGAKRVEAVDFDPVAVRVARENVRQNGA 221
Query: 124 RGKVFACRIQEAPQMITTCDV 144
V R + D+
Sbjct: 222 EDVVRTERSDLLKSVAGEADL 242
>gi|325273621|ref|ZP_08139837.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Pseudomonas sp.
TJI-51]
gi|324101225|gb|EGB98855.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Pseudomonas sp.
TJI-51]
Length = 403
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE+ + F+ +
Sbjct: 239 MTLARLAPQPGELLWDVGAGCGSIGIEWMRAHPACRALA---IEADEGRQGFIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI 145
G ++ + A + D I
Sbjct: 296 GVPGLQLVRGKAPAALHGLEPPDAI 320
>gi|257087540|ref|ZP_05581901.1| modification methylase HemK [Enterococcus faecalis D6]
gi|256995570|gb|EEU82872.1| modification methylase HemK [Enterococcus faecalis D6]
gi|315025303|gb|EFT37235.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX2137]
Length = 277
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|257084461|ref|ZP_05578822.1| modification methylase HemK [Enterococcus faecalis Fly1]
gi|256992491|gb|EEU79793.1| modification methylase HemK [Enterococcus faecalis Fly1]
Length = 277
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|255975087|ref|ZP_05425673.1| modification methylase HemK [Enterococcus faecalis T2]
gi|307285598|ref|ZP_07565737.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0860]
gi|255967959|gb|EET98581.1| modification methylase HemK [Enterococcus faecalis T2]
gi|306502822|gb|EFM72087.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0860]
Length = 277
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|168705108|ref|ZP_02737385.1| hypothetical protein GobsU_36582 [Gemmata obscuriglobus UQM 2246]
Length = 548
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 26/89 (29%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHPYP---SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
+F L P ++LG G I + I+ ++ + VV+
Sbjct: 56 ATLFGLAPPDVARCRVLELGCAAGGNIIPMAEAFPH---SAFVGIDLSGRQIADGTAVVR 112
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISA 147
+ ++ I + D +
Sbjct: 113 ECGLTNVRLEHASITDLDGSYGEFDYVLC 141
>gi|26451688|dbj|BAC42939.1| unknown protein [Arabidopsis thaliana]
Length = 355
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+D+G G G + I + L + SK +KA F+ +K +
Sbjct: 127 VEDGQSVLDIGCGWG--SLSLYIARKYSKCRLTGICNSKTQKA-FIDEKCRKLGLQNIEI 183
Query: 129 ACRIQEAPQMITTCDVISA 147
+ T D I +
Sbjct: 184 IVADISTFEHEGTYDRIFS 202
>gi|326918546|ref|XP_003205549.1| PREDICTED: glutathione S-transferase C-terminal domain-containing
protein-like [Meleagris gallopavo]
Length = 628
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V +L + +D SGGG GI+ + + S + V LIE+K + +
Sbjct: 428 AAVKKLAKPGDVIVDFCSGGGHVGIVLAHMMPSCQ---VVLIENKELSLMRAKDRSDELG 484
Query: 123 ARGKVF 128
F
Sbjct: 485 LNNISF 490
>gi|295113545|emb|CBL32182.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus sp. 7L76]
gi|315161811|gb|EFU05828.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0645]
Length = 277
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|256763196|ref|ZP_05503776.1| modification methylase HemK [Enterococcus faecalis T3]
gi|256853869|ref|ZP_05559234.1| hemK protein [Enterococcus faecalis T8]
gi|307290430|ref|ZP_07570345.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0411]
gi|256684447|gb|EEU24142.1| modification methylase HemK [Enterococcus faecalis T3]
gi|256710812|gb|EEU25855.1| hemK protein [Enterococcus faecalis T8]
gi|306498623|gb|EFM68125.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0411]
gi|315030388|gb|EFT42320.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX4000]
gi|315150060|gb|EFT94076.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX0012]
Length = 277
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|237741675|ref|ZP_04572156.1| methyltransferase [Fusobacterium sp. 4_1_13]
gi|256844999|ref|ZP_05550457.1| methyltransferase [Fusobacterium sp. 3_1_36A2]
gi|294785714|ref|ZP_06751002.1| methyltransferase [Fusobacterium sp. 3_1_27]
gi|229429323|gb|EEO39535.1| methyltransferase [Fusobacterium sp. 4_1_13]
gi|256718558|gb|EEU32113.1| methyltransferase [Fusobacterium sp. 3_1_36A2]
gi|294487428|gb|EFG34790.1| methyltransferase [Fusobacterium sp. 3_1_27]
Length = 517
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +++G G I +++ + + I+ + +++
Sbjct: 42 LGFLTPNLENARVLEIGCSFGGNIIPFALENPKAD---IVGIDLSGVQIDEGNRIIEYLG 98
Query: 123 ARG-KVFACRIQEAPQMITTCDVISA 147
++ + E + + D I
Sbjct: 99 LENIRLIHQNVLEFDKKLGKFDYIIC 124
>gi|188580165|ref|YP_001923610.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
populi BJ001]
gi|179343663|gb|ACB79075.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
populi BJ001]
Length = 245
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 24/87 (27%), Gaps = 7/87 (8%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D F L ID+G GGG + G V ++ + R +
Sbjct: 53 DPAAPFPL--EGLSVIDIGCGGGVLSEPLARL-----GATVTGLDPATGNIAAARAHAEA 105
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
I+ DV+ A
Sbjct: 106 EGLSIDYRDETIEAVAARGERFDVVLA 132
>gi|125717334|ref|YP_001034467.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
sanguinis SK36]
gi|125497251|gb|ABN43917.1| Precorrin-6B methylase 2,putative [Streptococcus sanguinis SK36]
Length = 189
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 12/109 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL +LH +D+GSG G I + +E V +E + + +Q
Sbjct: 22 SLDKLELH-RAKRMLDVGSGTGSVTIQAARTYPELE---VVAVERNEDAVALTQENIQHF 77
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL----ADLDTLLEYSFPWLYQ 166
+ + ++ + D I + ++ + ++ +
Sbjct: 78 GCQNVRLHQGLAPI-ELEGSFDAIF---VGGTGGNMQEIFDWCAQLMEP 122
>gi|34763057|ref|ZP_00144031.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887283|gb|EAA24380.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 517
Score = 33.9 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 8/86 (9%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +++G G I +++ + + I+ + +++
Sbjct: 42 LGFLTPNLENARVLEIGCSFGGNIIPFALENPKAD---IVGIDLSGVQIDEGNRIIEYLG 98
Query: 123 ARG-KVFACRIQEAPQMITTCDVISA 147
++ + E + + D I
Sbjct: 99 LENIRLIHQNVLEFDKKLGKFDYIIC 124
>gi|229829181|ref|ZP_04455250.1| hypothetical protein GCWU000342_01266 [Shuttleworthia satelles DSM
14600]
gi|229792344|gb|EEP28458.1| hypothetical protein GCWU000342_01266 [Shuttleworthia satelles DSM
14600]
Length = 696
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 13/98 (13%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
T E+ RH+ S+ L P I D+G+G G + + + V IE K +
Sbjct: 523 TKEEI--RHL--SVLALGLKP-GDILYDIGAGSGSVAMEAANISPDL---TVYAIEQKTE 574
Query: 110 KASFLRYVVQKTAARG-KVFACRI----QEAPQMITTC 142
+R + K+ R ++ P
Sbjct: 575 AVDLIRRNMAALDLNNIKLIHGRAPAALEDLPDPNAVF 612
>gi|223997766|ref|XP_002288556.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975664|gb|EED93992.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 708
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 37/120 (30%), Gaps = 23/120 (19%)
Query: 46 VSSSTVEDFWIRHVE--DS---------LRVFQ--LHPYPSIWIDLGSGGGFPGIITSIQ 92
+S + + + +V S L+ Q L + +GSG G P +
Sbjct: 62 ISITEYDKIYKSYVYQQHSHPRGPWVKALQSAQKLLSGENPRILSIGSGPGEPAATLAAN 121
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQ-----MITTCDVISA 147
+ E V S K ++ + + +I Q + D++ +
Sbjct: 122 FADAE---VVSAHSTAKCIAWAEDRFHQMNLTN--VSTKIVPNMQNLDVFEDGSFDLVVS 176
>gi|73670436|ref|YP_306451.1| hypothetical protein Mbar_A2976 [Methanosarcina barkeri str.
Fusaro]
gi|72397598|gb|AAZ71871.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 250
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P + +D+G G G I + + ++ + K V + R
Sbjct: 30 LLSSLPAGTKILDIGCGVGMQTIHLAKICNDCHITATDIYQPFLDKLME-NAVKEGFDDR 88
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+ + P D+I +
Sbjct: 89 ITTVCASMDDLPFEAGEFDIIWS 111
>gi|37521705|ref|NP_925082.1| methyltransferase [Gloeobacter violaceus PCC 7421]
gi|60390528|sp|Q7NIP7|PRMA_GLOVI RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|35212703|dbj|BAC90077.1| glr2136 [Gloeobacter violaceus PCC 7421]
Length = 316
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
LR + P + D+G G G + ++ + G +++ + R ++ +
Sbjct: 162 CLRALESVPDLGTFADVGCGSG----VLTVAALKLGAGRGWAVDTDDLAVVSTRKNLEIS 217
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
+V R Q+ D + +
Sbjct: 218 GLEERVTVAR-GSTEQLSGPLDGVVS 242
>gi|148548978|ref|YP_001269080.1| type 11 methyltransferase [Pseudomonas putida F1]
gi|148513036|gb|ABQ79896.1| Methyltransferase type 11 [Pseudomonas putida F1]
Length = 254
Score = 33.9 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +DLG G G + ++ + +L +S + ++ A
Sbjct: 46 ARVLDLGCGAGHVSFHVAPLVAEV--VAYDLSQSMLDVVA--SAAAERGLANITTERGAA 101
Query: 133 QEAPQMITTCDVISAR 148
+ P + D + +R
Sbjct: 102 ERVPFADASFDFVFSR 117
>gi|310795749|gb|EFQ31210.1| methyltransferase domain-containing protein [Glomerella graminicola
M1.001]
Length = 264
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 13/90 (14%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQ-LSSIEGGLVNLIESKNKKASFLRYV 117
+ D L V +D+G G G I I L + GGLV ++ ++ + +
Sbjct: 28 LLDKLAVVP----GERVLDVGCGPG--NITAHIADLVTPGGGLVVGVDPSPERIA----L 77
Query: 118 VQKTAARGKVFA-CRIQEAPQM-ITTCDVI 145
+K F R ++ + + DVI
Sbjct: 78 ARKLERPNLEFHVGRAEDLSRFAAASFDVI 107
>gi|306833420|ref|ZP_07466547.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC
700338]
gi|304424190|gb|EFM27329.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC
700338]
Length = 276
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G+G G I + + V + ++ K
Sbjct: 101 LVLKENSRADLRVLDIGTGSGAIAISLKAARPNWQ---VTASDISADALQLVKENALKNQ 157
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ + Q+ D+I +
Sbjct: 158 VELTLIQSDV--FSQITERFDMIIS 180
>gi|260888227|ref|ZP_05899490.1| ribosomal protein L11 methyltransferase [Selenomonas sputigena ATCC
35185]
gi|260862061|gb|EEX76561.1| ribosomal protein L11 methyltransferase [Selenomonas sputigena ATCC
35185]
Length = 320
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ L D+G+G G + +I + + V ++ R V++ A
Sbjct: 173 ALEDLVRPGMTVFDVGTGSG----VLAIVAAKLGAKRVEAVDFDPVAVRVARENVRQNGA 228
Query: 124 RGKVFACRIQEAPQMITTCDV 144
V R + D+
Sbjct: 229 EDVVRTERSDLLKSVAGEADL 249
>gi|325981710|ref|YP_004294112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Nitrosomonas sp. AL212]
gi|325531229|gb|ADZ25950.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Nitrosomonas sp. AL212]
Length = 278
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 7/87 (8%)
Query: 64 RVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+L P +DLG+G G GI + + V ++ + V+
Sbjct: 99 WALELIPSQKFCKVLDLGTGSGAIGISIAKHRPQSQ---VIAVDLSPAAIDVCQSNVEIL 155
Query: 122 AARG-KVFACRIQEAPQMITTCDVISA 147
V + D+I +
Sbjct: 156 EVANLNVIRGNWFD-ELSGEKFDLIVS 181
>gi|228905898|ref|ZP_04069795.1| hypothetical protein bthur0013_890 [Bacillus thuringiensis IBL 200]
gi|228853713|gb|EEM98473.1| hypothetical protein bthur0013_890 [Bacillus thuringiensis IBL 200]
Length = 213
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 117 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|229009610|ref|ZP_04166836.1| hypothetical protein bmyco0001_860 [Bacillus mycoides DSM 2048]
gi|229131108|ref|ZP_04260020.1| hypothetical protein bcere0014_860 [Bacillus cereus BDRD-ST196]
gi|228652321|gb|EEL08246.1| hypothetical protein bcere0014_860 [Bacillus cereus BDRD-ST196]
gi|228751632|gb|EEM01432.1| hypothetical protein bmyco0001_860 [Bacillus mycoides DSM 2048]
Length = 213
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + + +++++ + + ++ A
Sbjct: 64 IEAFQMPDVKGNVLDVGCGYGPIGLSLA---KEFQNREIHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A ++ RI ++ + VI + RA
Sbjct: 117 ANNRIENIRILQSSVYENVDGKYAVILSNPPIRA 150
>gi|229165089|ref|ZP_04292884.1| hypothetical protein bcere0007_860 [Bacillus cereus AH621]
gi|228618352|gb|EEK75382.1| hypothetical protein bcere0007_860 [Bacillus cereus AH621]
Length = 213
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 36/94 (38%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + + +++++ + + ++ A
Sbjct: 64 IEAFQMPDVKGNVLDVGCGYGPIGLSLA---KEFQNREIHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
++ RI ++ + VI + RA
Sbjct: 117 VNNRIENIRILQSSVYENVDGKYAVILSNPPIRA 150
>gi|72383531|ref|YP_292886.1| modification methylase HemK [Prochlorococcus marinus str. NATL2A]
gi|72003381|gb|AAZ59183.1| modification methylase HemK [Prochlorococcus marinus str. NATL2A]
Length = 273
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 29/92 (31%), Gaps = 13/92 (14%)
Query: 63 LRVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + ++ + W DLG+G G + + L + G ++ L +
Sbjct: 93 IALKKIINFDSGRWADLGTGSGAIAVSLAKSLPNWNGYATDIS------NEALELAKRNL 146
Query: 122 AARGKVFACRI------QEAPQMITTCDVISA 147
A R + + D++ +
Sbjct: 147 KAIVPNANVRFSLGDWWEPLKRWRGRFDLVLS 178
>gi|88855569|ref|ZP_01130233.1| hypothetical protein A20C1_02061 [marine actinobacterium PHSC20C1]
gi|88815476|gb|EAR25334.1| hypothetical protein A20C1_02061 [marine actinobacterium PHSC20C1]
Length = 440
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 89 TSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ L+ + I++ + + + ++T A + R + + +R
Sbjct: 212 LGMALADTREDRIIAIDANPDRGTLAERIDKQTRATVRDVVMRAESLHTFSE-FQTVVSR 270
Query: 149 ALADLDTLLEYSFPWLYQ 166
LD L + P + +
Sbjct: 271 DETRLDVLASDTDPHVSE 288
>gi|88812512|ref|ZP_01127761.1| cyclopropane-fatty-acyl-phospholipid synthase [Nitrococcus mobilis
Nb-231]
gi|88790298|gb|EAR21416.1| cyclopropane-fatty-acyl-phospholipid synthase [Nitrococcus mobilis
Nb-231]
Length = 411
Score = 33.9 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L ID+G G G +I L+ V + ++ R V++ V
Sbjct: 162 LLAPGQRVIDIGCGWG----GLAIFLAETCDVRVTGLTLSREQYRVARERVKQRGLEALV 217
Query: 128 FACRIQEAPQMITTCDVISA 147
R+++ + T D + +
Sbjct: 218 E-IRLEDYRENTETYDRVVS 236
>gi|313202221|ref|YP_004040879.1| methyltransferase small [Methylovorus sp. MP688]
gi|312441537|gb|ADQ85643.1| methyltransferase small [Methylovorus sp. MP688]
Length = 331
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 6/80 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKV 127
P +D+G+G G I + E V ++ + R R ++
Sbjct: 148 QPTVRRAVDIGTGSGVGAIALAGLFPDAE---VFGVDINPHALALARVNAAANGCERVQM 204
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + D+I A
Sbjct: 205 VHSDL--LQDVAGEFDLIIA 222
>gi|242049048|ref|XP_002462268.1| hypothetical protein SORBIDRAFT_02g022770 [Sorghum bicolor]
gi|241925645|gb|EER98789.1| hypothetical protein SORBIDRAFT_02g022770 [Sorghum bicolor]
Length = 384
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 15/86 (17%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-- 125
+ +D+G+G G I S+ + V IE S + + ++
Sbjct: 98 FLIKDKVVLDVGAGTG----ILSLFCAKAGAKHVYAIE-----CSQMADMAKEIVKSNGY 148
Query: 126 ----KVFACRIQEAPQMITTCDVISA 147
V +++E + DVI +
Sbjct: 149 SDVITVIKGKVEEIELPVPKVDVIIS 174
>gi|240169328|ref|ZP_04747987.1| hypothetical protein MkanA1_08441 [Mycobacterium kansasii ATCC
12478]
Length = 274
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 27/129 (20%)
Query: 22 SRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSG 81
S E+ E+ + L + +K ++W R L V +D+G G
Sbjct: 29 SEESAEQF---FELQTESNK-----------EYWRR-----LGVAAPDWTGKRVLDVGCG 69
Query: 82 GGFPGIITSIQLSSIEGGLVNLIESKNKKASFL-RYVVQKTAARGKVFACRIQEAPQMI- 139
G SI+++ G V ++ +F R V Q+ R +A +
Sbjct: 70 LG----ALSIEMAQA-GASVLGVDLDENLIAFANRKVAQEFPQLLDRVTFRAADAMSLPV 124
Query: 140 -TTCDVISA 147
DVI +
Sbjct: 125 AEPFDVIVS 133
>gi|239944592|ref|ZP_04696529.1| putative RNA methylase [Streptomyces roseosporus NRRL 15998]
gi|239991054|ref|ZP_04711718.1| putative RNA methylase [Streptomyces roseosporus NRRL 11379]
gi|291448056|ref|ZP_06587446.1| RNA methylase [Streptomyces roseosporus NRRL 15998]
gi|291351003|gb|EFE77907.1| RNA methylase [Streptomyces roseosporus NRRL 15998]
Length = 194
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN--LIESKNKKASFLRYVVQKTAARG-KV 127
+ DL +G G ++ L ++ G V+ L+E+ K +R V+ G +V
Sbjct: 45 EGTRVADLYAGSG------AVGLEALSRGAVHALLVEADPKAVRTVRDNVRTLGLPGAEV 98
Query: 128 FACRIQEA---PQMITTCDVI 145
A + ++ P D++
Sbjct: 99 RAGKAEQIVTGPAPSDPYDIV 119
>gi|228956542|ref|ZP_04118338.1| hypothetical protein bthur0005_880 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228803107|gb|EEM49929.1| hypothetical protein bthur0005_880 [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 213
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 117 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|255659201|ref|ZP_05404610.1| ribosomal protein L11 methyltransferase [Mitsuokella multacida DSM
20544]
gi|260848653|gb|EEX68660.1| ribosomal protein L11 methyltransferase [Mitsuokella multacida DSM
20544]
Length = 314
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
D+G+G G + ++ + + G V ++ A+ + V++ +V
Sbjct: 172 VKGGMRVFDVGTGSG----VLAVAAAKLGAGEVVAMDYDRTAATVAQENVERNHVEDRVT 227
Query: 129 ACRIQEAPQMITTCDVISA 147
D+I A
Sbjct: 228 TGVSDLLKAFTGKADLIIA 246
>gi|148555747|ref|YP_001263329.1| type 11 methyltransferase [Sphingomonas wittichii RW1]
gi|148500937|gb|ABQ69191.1| Methyltransferase type 11 [Sphingomonas wittichii RW1]
Length = 285
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 13/93 (13%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G +I + GG + R ++ A
Sbjct: 50 GGQVLDVGCGTG--ATTLAIAGALGPGGECVGADISGPMIGLARARAEREGAAAHFVHAD 107
Query: 132 IQEAPQMITTCDVISA-----------RALADL 153
++ + D++++ RA A+L
Sbjct: 108 VESHGFAPASFDLVTSRFGVMFFGDPVRAFANL 140
>gi|163938109|ref|YP_001642993.1| methyltransferase small [Bacillus weihenstephanensis KBAB4]
gi|163860306|gb|ABY41365.1| methyltransferase small [Bacillus weihenstephanensis KBAB4]
Length = 199
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + + +++++ + + ++ A
Sbjct: 50 IEAFQMPDVKGNVLDVGCGYGPIGLSLA---KEFQNREIHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A ++ RI ++ + VI + RA
Sbjct: 103 ANNRIENIRILQSSVYENVDGKYAVILSNPPIRA 136
>gi|148264490|ref|YP_001231196.1| methyltransferase type 11 [Geobacter uraniireducens Rf4]
gi|146397990|gb|ABQ26623.1| Methyltransferase type 11 [Geobacter uraniireducens Rf4]
Length = 280
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 71 YPSIWIDLGSGGGFPGIITS-IQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +DLGSG G ++ + + V++ ++ KA+ + +V
Sbjct: 75 EGDVVLDLGSGAGLDLLLAAQKVGPTGRVMGVDMTDAMIAKAN--ENIRAAKVTNVEVRK 132
Query: 130 CRIQEAPQMITTCDVISA 147
I+ P + D + +
Sbjct: 133 GIIEALPVESGSVDWVIS 150
>gi|332670947|ref|YP_004453955.1| methyltransferase [Cellulomonas fimi ATCC 484]
gi|332339985|gb|AEE46568.1| methyltransferase [Cellulomonas fimi ATCC 484]
Length = 185
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFA 129
+ +DL +G G G+ + S V L+ES + A R V R V A
Sbjct: 43 DDARVLDLYAGSGALGLEAA----SRGARAVTLVESAREAADVCRRNVATLGLRDVTVVA 98
Query: 130 CRIQEAPQMIT--TCDVI 145
R + Q D++
Sbjct: 99 ERAERFVQRRPVAPWDLV 116
>gi|332095028|gb|EGJ00063.1| ubiE/COQ5 methyltransferase family protein [Shigella boydii
5216-82]
Length = 256
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|323495910|ref|ZP_08100978.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis
DSM 21326]
gi|323319126|gb|EGA72069.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis
DSM 21326]
Length = 340
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+D G G G G + + IE + + + + + ++ G+VFA +
Sbjct: 202 GKVLDFGCGAGVIGSVMATLNPEIE---LEMCDISALAVASSQATLEANQLTGRVFASDV 258
>gi|229107787|ref|ZP_04237423.1| hypothetical protein bcere0018_880 [Bacillus cereus Rock1-15]
gi|228675636|gb|EEL30844.1| hypothetical protein bcere0018_880 [Bacillus cereus Rock1-15]
Length = 199
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 50 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 103 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 136
>gi|21226763|ref|NP_632685.1| arsenite S-adenosylmethyltransferase [Methanosarcina mazei Go1]
gi|20905055|gb|AAM30357.1| methyltransferase [Methanosarcina mazei Go1]
Length = 249
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +L P I +DLGSG GF + + G V ++ + ++ +K
Sbjct: 66 ASIAELKP-GDIVLDLGSGAGFDCFLAA--QKVGNSGKVIGVDMTPEMVEKVQANARKYG 122
Query: 123 ARGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P ++ DVI +
Sbjct: 123 YSNVEFRQGDIEALPVEDSSVDVIIS 148
>gi|51894217|ref|YP_076908.1| hypothetical protein STH3082 [Symbiobacterium thermophilum IAM
14863]
gi|51857906|dbj|BAD42064.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 206
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 9/89 (10%)
Query: 62 SLRVFQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + + +DLG G G GI+ + G + ++E + A R ++
Sbjct: 46 SLLLIEAMEIGPADTVLDLGCGYGPIGIVAARLAPQ---GFIYMVEINERAAELARRNLE 102
Query: 120 KTAARGKVFACRIQEAPQMITT--CDVIS 146
A R+ + + + D +
Sbjct: 103 ANAIANAEV--RVGDGLEPVAGIAFDAVV 129
>gi|33860876|ref|NP_892437.1| putative protein methyltransferase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633818|emb|CAE18777.1| putative protein methyltransferase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 289
Score = 33.9 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Query: 59 VEDSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
+ D + +F+ ++DLG+G G I +++ + G + I+ K + +
Sbjct: 105 IIDIISGIFKNKEEKITFVDLGTGSGAISIALALENPNWNGIATD-IDKNAIKIASRNFA 163
Query: 118 VQKTAARGKVFACRIQE-APQMITTCDVISA 147
+ K + + D +
Sbjct: 164 TYSNQSNLKFYNGNWWDPLKNFKGEIDFAVS 194
>gi|315653117|ref|ZP_07906042.1| methyltransferase domain protein [Lactobacillus iners ATCC 55195]
gi|315489482|gb|EFU79119.1| methyltransferase domain protein [Lactobacillus iners ATCC 55195]
Length = 204
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
++V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 IKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSRVTMIDINERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F+ +I
Sbjct: 111 ---DNVNIFSSDCYRNLDEQEQFGLI 133
>gi|315178717|gb|ADT85631.1| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio
furnissii NCTC 11218]
Length = 153
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 8/98 (8%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ W R D +DLG G G + + G V L + N
Sbjct: 56 IHRLWKRFTIDCAGARP----GQRILDLGGGTG--DLTAKFSRIVGDKGHVVLADINNSM 109
Query: 111 ASFLRYVVQKTAARGKVF--ACRIQEAPQMITTCDVIS 146
+ R ++ G V +E P D I+
Sbjct: 110 LNVGRDKLRDIGIVGNVHYVQANAEELPFPDNYFDCIT 147
>gi|313610250|gb|EFR85522.1| UbiE/COQ5 family methyltransferase [Listeria monocytogenes FSL
F2-208]
Length = 197
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D L+ + + +DLG+G GF +I + + V ++ K + ++
Sbjct: 33 DFLKAMPIGK-TASILDLGAGTGF----LTIPAAKLVDNTVFALDLDAKMLELIESKAEE 87
Query: 121 TAA-RGKVFACRIQEAPQMITTCDVISA 147
+ + + P ++ DV+ A
Sbjct: 88 AGLANVETLEASMDDIPLEASSVDVVLA 115
>gi|260767527|ref|ZP_05876463.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
[Vibrio furnissii CIP 102972]
gi|260617427|gb|EEX42610.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5
[Vibrio furnissii CIP 102972]
Length = 260
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 29/98 (29%), Gaps = 8/98 (8%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
+ W R D +DLG G G + + G V L + N
Sbjct: 56 IHRLWKRFTIDCAGARP----GQRILDLGGGTG--DLTAKFSRIVGDKGHVVLADINNSM 109
Query: 111 ASFLRYVVQKTAARGKVF--ACRIQEAPQMITTCDVIS 146
+ R ++ G V +E P D I+
Sbjct: 110 LNVGRDKLRDIGIVGNVHYVQANAEELPFPDNYFDCIT 147
>gi|228919051|ref|ZP_04082430.1| hypothetical protein bthur0011_870 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229041006|ref|ZP_04189769.1| hypothetical protein bcere0027_870 [Bacillus cereus AH676]
gi|228727303|gb|EEL78497.1| hypothetical protein bcere0027_870 [Bacillus cereus AH676]
gi|228840576|gb|EEM85838.1| hypothetical protein bthur0011_870 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 213
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 117 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|229142907|ref|ZP_04271348.1| hypothetical protein bcere0012_880 [Bacillus cereus BDRD-ST24]
gi|296500935|ref|YP_003662635.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
BMB171]
gi|228640528|gb|EEK96917.1| hypothetical protein bcere0012_880 [Bacillus cereus BDRD-ST24]
gi|296321987|gb|ADH04915.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
BMB171]
Length = 199
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 50 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 103 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 136
>gi|188532753|ref|YP_001906550.1| 16S ribosomal RNA m2G1207 methyltransferase [Erwinia tasmaniensis
Et1/99]
gi|226712953|sp|B2VH94|RSMC_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|188027795|emb|CAO95652.1| Ribosomal RNA small subunit methyltransferase C [Erwinia
tasmaniensis Et1/99]
Length = 342
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + L P+ +D+G G G + + + + L + + + +
Sbjct: 187 LLLSTLKPHMKGKVLDVGCGAGVLSAMLASFSPKVR---LTLTDVNAAAIASSKATLAAN 243
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
G VFA + + D+I +
Sbjct: 244 QLEGDVFASNV--YSDISGRFDMIIS 267
>gi|170680535|ref|YP_001742333.1| UbiE/COQ5 family methlytransferase [Escherichia coli SMS-3-5]
gi|218698843|ref|YP_002406472.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli IAI39]
gi|300936081|ref|ZP_07151023.1| methyltransferase domain protein [Escherichia coli MS 21-1]
gi|170518253|gb|ACB16431.1| methyltransferase, UbiE/COQ5 family [Escherichia coli SMS-3-5]
gi|218368829|emb|CAR16577.1| putative S-adenosyl-L-methionine-dependent methyltransferase
[Escherichia coli IAI39]
gi|300458756|gb|EFK22249.1| methyltransferase domain protein [Escherichia coli MS 21-1]
Length = 256
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V + +D+G G G + + V + + + +
Sbjct: 36 LAVRLADYPDASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQ 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D++ +R
Sbjct: 91 LKNITTRQGYAESLPFADNAFDIVISR 117
>gi|167462022|ref|ZP_02327111.1| cobalt-precorrin-6Y C(15)-methyltransferase [Paenibacillus larvae
subsp. larvae BRL-230010]
gi|322384872|ref|ZP_08058533.1| hypothetical protein PL1_1116 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321150341|gb|EFX43843.1| hypothetical protein PL1_1116 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 179
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 12/110 (10%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + ++D+G+G G + + + V IE + + + +
Sbjct: 10 SIDKLSIDGNSRRFLDVGAGTGSVALQVARMFPHV---SVTAIERSGEALALIEQNRHQL 66
Query: 122 AARGKVFACRIQEAPQMITTCDVISARAL-----ADLDTLLEYSFPWLYQ 166
P T D I L ++++S L
Sbjct: 67 LLENVDIISAEAPIPLENTVFDAI----FIGGSGGKLAEIIDWSHTLLKP 112
>gi|150026062|ref|YP_001296888.1| methylase of polypeptide chain release factors [Flavobacterium
psychrophilum JIP02/86]
gi|149772603|emb|CAL44086.1| Methylase of polypeptide chain release factors [Flavobacterium
psychrophilum JIP02/86]
Length = 285
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G G I + ++ V I+ +K + + I
Sbjct: 119 KILDIGTGSGCIAISLA---KNLPNASVFAIDVSDKALATAQKNAVLNEVDITFIEKNIL 175
Query: 134 EAPQMITTCDVISA 147
+ + D+I +
Sbjct: 176 QTEDLNQEFDIIVS 189
>gi|115729472|ref|XP_001200724.1| PREDICTED: similar to NIK and IKK(beta) binding protein, partial
[Strongylocentrotus purpuratus]
gi|115894148|ref|XP_001195122.1| PREDICTED: similar to NIK and IKK(beta) binding protein, partial
[Strongylocentrotus purpuratus]
Length = 560
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 35/107 (32%), Gaps = 13/107 (12%)
Query: 62 SLRVFQLHPYPSIWIDLG---SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
L+V+ P+ +LG G F I +I L G V + K K + L
Sbjct: 12 CLQVYNPLPFELRVSNLGFLVEGLKFEPIPATITLPPQSGPHVVSLMGKPKGSGLLTITG 71
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLY 165
T G CR+ P + + +A + P L
Sbjct: 72 YTTNVLGVESHCRLVNVPAVEEPFYQVK---VAP-------ALPLLK 108
>gi|78776927|ref|YP_393242.1| methyltransferase small [Sulfurimonas denitrificans DSM 1251]
gi|78497467|gb|ABB44007.1| Methyltransferase small [Sulfurimonas denitrificans DSM 1251]
Length = 231
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 13/93 (13%)
Query: 61 DSLRVFQLH---PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DS+ ++ +D+G+G G G++ + + V L E+ K+ F++Y
Sbjct: 15 DSIFLYDFISSFKPKGRVLDVGAGCGVVGLLVA-----KDNEKVEL-EAVEKQELFVKYA 68
Query: 118 ---VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ K+ E + + D I +
Sbjct: 69 TINARVNKIPYKIHKSDFLELDEE-SKYDYIIS 100
>gi|148266087|ref|YP_001232793.1| O-methyltransferase family protein [Geobacter uraniireducens Rf4]
gi|146399587|gb|ABQ28220.1| O-methyltransferase, family 3 [Geobacter uraniireducens Rf4]
Length = 223
Score = 33.9 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P + ++LGSG G+ + + L G V L E K ++ R + ++
Sbjct: 62 LHLLTRLKQPKLVVELGSGFGYSALWFARALGE--GAKVVLTEYAEKNIAYARQMFEEEG 119
Query: 123 ARGKVFACRIQEAPQMITTCDVI 145
K R+ A ++ D I
Sbjct: 120 LADKAE-FRVGNALEIGQEYDNI 141
>gi|315172489|gb|EFU16506.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
TX1346]
Length = 277
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 40 SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEG 98
++ L+ E+ R + +P P +D+G+G G I + +
Sbjct: 87 NEHT-LIPRPETEELVER-------CLKANPDTPLTVVDVGTGTGAIAISLKLARPNWRV 138
Query: 99 GLVNLIE 105
++L E
Sbjct: 139 IAIDLSE 145
>gi|291482478|dbj|BAI83553.1| hypothetical protein BSNT_00207 [Bacillus subtilis subsp. natto
BEST195]
Length = 201
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
DF R + DS F+ ++D+G G G G+ + S + +++I+ +
Sbjct: 43 DFGSRLLIDS---FEEPEVEGSFLDVGCGYGPIGLSLA---SDFKDRTIHMIDVNERAVE 96
Query: 113 FLRYVVQKTAARGK 126
++
Sbjct: 97 LSNENAEQNGITNV 110
>gi|239618375|ref|YP_002941697.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1]
gi|239507206|gb|ACR80693.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1]
Length = 256
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 10/97 (10%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ H +DLG+G G +I+L+ +G + ++ K +
Sbjct: 33 KLINEHQVNGKILDLGTGTG----RWAIELAD-KGMEIIAVDPAEKMLKVAEEKAKLYGV 87
Query: 124 RGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
K + P T D + A + +L Y+
Sbjct: 88 NIKFTKASGEALPFESNTFDFVLA-----MGDVLSYA 119
>gi|19704036|ref|NP_603598.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19714228|gb|AAL94897.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 517
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +++G G I +++ E V I+ N + +++ ++
Sbjct: 50 EKARVLEIGCSFGGNIIPFALENPKAE---VVGIDLSNVQIEEGNRIIEFLNLENIRLIH 106
Query: 130 CRIQEAPQMITTCDVISA 147
+ E + + D I
Sbjct: 107 QNVLEFDEKLGKFDYIIC 124
>gi|15892888|ref|NP_360602.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia conorii str.
Malish 7]
gi|21363062|sp|Q92H07|UBIG_RICCN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
Full=3,4-dihydroxy-5-hexaprenylbenzoate
methyltransferase; Short=DHHB methyltransferase
gi|15620077|gb|AAL03503.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia conorii str.
Malish 7]
Length = 289
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+D+G GGG + +G V I++ ++ + I+E
Sbjct: 105 ILDVGCGGGLIATPLA-----AQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEE 159
Query: 135 APQMITTCDVISA 147
DV+
Sbjct: 160 L-DSDKLYDVVIC 171
>gi|313903325|ref|ZP_07836717.1| Methyltransferase type 11 [Thermaerobacter subterraneus DSM 13965]
gi|313466413|gb|EFR61935.1| Methyltransferase type 11 [Thermaerobacter subterraneus DSM 13965]
Length = 275
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 36/107 (33%), Gaps = 18/107 (16%)
Query: 65 VFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V L P P +D+ + G G+ + + V +++ A +
Sbjct: 55 VAALDPQPHQRLLDVATAAGHTGLTFA-----PQVAEVVGLDATPAMAEAFAREAEARGV 109
Query: 124 RG-KVFACRIQEAPQMITTCDVISAR-----------ALADLDTLLE 158
+ + + P + D+++ R A+A++ +L
Sbjct: 110 QNARFVTGDVHALPFPEGSFDLVTCRRAAHHFGDVVTAVAEMARVLR 156
>gi|300866280|ref|ZP_07110988.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300335714|emb|CBN56148.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 233
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 5/91 (5%)
Query: 58 HVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
H+ SL + +L P + + +G+G G I + + + +E R
Sbjct: 33 HLLISLVLSEL-PADARILCVGAGTGLELIDLAKRFPQWQ---FTAVEPAAPMLDICRQR 88
Query: 118 VQKTAARGK-VFACRIQEAPQMITTCDVISA 147
++ + F ++ + D +
Sbjct: 89 AEENGIASRCTFHEGYLDSLPASESFDAATC 119
>gi|326789431|ref|YP_004307252.1| methyltransferase type 11 [Clostridium lentocellum DSM 5427]
gi|326540195|gb|ADZ82054.1| Methyltransferase type 11 [Clostridium lentocellum DSM 5427]
Length = 205
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 10/76 (13%)
Query: 73 SIWIDLGSGGGFPGIITSIQ--LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G ++ I ++ V+ E K A K R ++
Sbjct: 45 ETVLDVGCGTG--SLLYEILDRKPQVKAVGVDFSEEMLKVAR------DKLPKRVELIQG 96
Query: 131 RIQEAPQMITTCDVIS 146
+ P DV+
Sbjct: 97 DAEAIPFENKRFDVVV 112
>gi|294791499|ref|ZP_06756656.1| putative methyltransferase small domain protein [Scardovia
inopinata F0304]
gi|294457970|gb|EFG26324.1| putative methyltransferase small domain protein [Scardovia
inopinata F0304]
Length = 243
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR- 131
+ +DLG G G + + + V ++S + + + R
Sbjct: 90 ATCLDLGCGWGPISLALAREYPQAR---VWALDSNERAVELTQANANRNGLTTIAAGTRQ 146
Query: 132 -IQE---APQMITTCDVISA 147
+++ A + D+I +
Sbjct: 147 DLEDRYGAEWTDASFDLIWS 166
>gi|254559646|ref|YP_003066741.1| UbiG: ubiquinone biosynthesis O-methyltransferase [Methylobacterium
extorquens DM4]
gi|254266924|emb|CAX22723.1| putative UbiG: ubiquinone biosynthesis O-methyltransferase
[Methylobacterium extorquens DM4]
Length = 245
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 21/82 (25%), Gaps = 5/82 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G GGG + G V ++ + R +
Sbjct: 56 APFPLEGLSVIDIGCGGGVLSEPLARL-----GATVTGLDPATGNVAAARAHAEAEGLTI 110
Query: 126 KVFACRIQEAPQMITTCDVISA 147
I+ D++ A
Sbjct: 111 DYRDETIEAVAARGERFDIVLA 132
>gi|222085073|ref|YP_002543603.1| cyclopropane-fatty-acyl-phospholipid synthase protein
[Agrobacterium radiobacter K84]
gi|221722521|gb|ACM25677.1| cyclopropane-fatty-acyl-phospholipid synthase protein
[Agrobacterium radiobacter K84]
Length = 419
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 7/91 (7%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH+ L +++GSG G G+ + ++ + L E + K + R
Sbjct: 163 RHI----AAKLLVEPGQRVLEIGSGWGGMGMYLAEANPGLDFTGITLSEEQLKVS---RE 215
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
K +V D I +
Sbjct: 216 RAAKRGLSDRVRFELQDYRYLKDRKFDRIVS 246
>gi|158522589|ref|YP_001530459.1| methyltransferase type 11 [Desulfococcus oleovorans Hxd3]
gi|158511415|gb|ABW68382.1| Methyltransferase type 11 [Desulfococcus oleovorans Hxd3]
Length = 217
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 32/94 (34%), Gaps = 15/94 (15%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ P S +D+G G G + + + V ++ + ++ K +
Sbjct: 30 ILDFVPEGSTVLDVGCGTGRLALELA-----AKCRHVTGVDLSRRMLAYCERQKNKRGVK 84
Query: 125 GKVFA----CRIQEAPQMITTCDVISARALADLD 154
FA R+ + + + DV A+ L
Sbjct: 85 NLDFAFGDSTRLAQ--DLDRSYDV----AVTSLA 112
>gi|49082220|gb|AAT50510.1| PA4790 [synthetic construct]
Length = 250
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 14/104 (13%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P +D+G+G G + + G V L E R + +
Sbjct: 38 LPERPLRVLDIGAGLGHMSLWLA-----ARGHRVTLAEPAQPMLDGARQRFAEAGQAAEF 92
Query: 128 FACRIQE-APQMITTCDVISARAL--------ADLDTLLEYSFP 162
QE Q+ D++ A+ A L L + P
Sbjct: 93 IQAPWQELLGQLTEPYDLVLCHAVLEWLAEPHAILPVLHQLCAP 136
>gi|85058367|ref|YP_454069.1| 16S ribosomal RNA m2G1207 methyltransferase [Sodalis glossinidius
str. 'morsitans']
gi|123520122|sp|Q2NW11|RSMC_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
AltName: Full=16S rRNA m2G1207 methyltransferase;
AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
rsmC
gi|84778887|dbj|BAE73664.1| ribosomal RNA small subunit methyltransferase C [Sodalis
glossinidius str. 'morsitans']
Length = 350
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVED--SLRVFQLH--PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R D S + P+ D+G G G + + G + L
Sbjct: 170 IKTLPGVFSRDGLDNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLA---KGAAGVQLTL 226
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++ + R + +G+V A + + D+I +
Sbjct: 227 SDAHAPALAASRATLAVNGLQGEVLAGDV--YSAISGRFDMIIS 268
>gi|50550355|ref|XP_502650.1| YALI0D10234p [Yarrowia lipolytica]
gi|49648518|emb|CAG80838.1| YALI0D10234p [Yarrowia lipolytica]
Length = 231
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI- 132
+++GSG G G+ ++ S+ V + + +N + ++ + KV A +
Sbjct: 76 RVLEIGSGTGLTGLAIALSESAPPNLKVWVTDQENM-IPLMNQNIELNNLQDKVVAEVLD 134
Query: 133 --QEAPQMIT--TCDVISARALADLDTLLEYSFPWLYQ 166
+E P+ + D++ A AD LE +FP L +
Sbjct: 135 WGEELPEFLEGQPVDLVLA---AD-CVYLESAFPLLEK 168
>gi|93004886|ref|YP_579323.1| methyltransferase small [Psychrobacter cryohalolentis K5]
gi|92392564|gb|ABE73839.1| methyltransferase small [Psychrobacter cryohalolentis K5]
Length = 202
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Query: 62 SLRVFQLHPY--PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + + IDLG G G G+ + + + + LI+ + R +
Sbjct: 49 SLMLLDYVDFQADDDSIDLGCGYGVLGMAAARECPNGQHT---LIDKDFMAVEYARLNCE 105
Query: 120 KTAARGKVFA 129
K +
Sbjct: 106 KNGLKNVDVH 115
>gi|95930758|ref|ZP_01313491.1| methyltransferase small [Desulfuromonas acetoxidans DSM 684]
gi|95133238|gb|EAT14904.1| methyltransferase small [Desulfuromonas acetoxidans DSM 684]
Length = 272
Score = 33.9 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+DLG G +I + S+ + L ++ +A V+ R V +
Sbjct: 60 ERVVDLGCGSAVMALILARAFPSLSVVALELQAAQVARARK-SVVLNGLEGRIDVQQTDV 118
Query: 133 QEAPQMI-TTCDVISA 147
+E P D++
Sbjct: 119 REVPSAWHGDFDLVVC 134
>gi|296327895|ref|ZP_06870431.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296155029|gb|EFG95810.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 517
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+ +++G G I +++ E V I+ N + +++ ++
Sbjct: 50 EKARVLEIGCSFGGNIIPFALENPKAE---VVGIDLSNVQIEEGNRIIEFLNLENIRLIH 106
Query: 130 CRIQEAPQMITTCDVISA 147
+ E + + D I
Sbjct: 107 QNVLEFDEKLGKFDYIIC 124
>gi|294793674|ref|ZP_06758811.1| DNA mismatch repair protein MutS [Veillonella sp. 3_1_44]
gi|294455244|gb|EFG23616.1| DNA mismatch repair protein MutS [Veillonella sp. 3_1_44]
Length = 877
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADL 153
++ + ++ +K+K + + Q+ K+ +QE +ARALADL
Sbjct: 506 PELKEFEIKILSAKDKIIALEHELYQQLRNDIKLVIKDVQE-----------TARALADL 554
Query: 154 DTLLEYSF 161
D L +
Sbjct: 555 DVLCSLAL 562
>gi|259047576|ref|ZP_05737977.1| tellurite resistance protein TehB [Granulicatella adiacens ATCC
49175]
gi|259035767|gb|EEW37022.1| tellurite resistance protein TehB [Granulicatella adiacens ATCC
49175]
Length = 288
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 16/107 (14%)
Query: 41 KKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
KK +L T + +DLGSG G + + +G
Sbjct: 101 KKYDLT--RTHSEVIE---------AAPKFEKGPILDLGSGQGRNSLYLA-----KKGFE 144
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V ++ + + L+ + ++ V I+ A + I +
Sbjct: 145 VTALDIQTMSLAHLQQIAEEEGLAIHVEPYNIESADIPGGLYNAIIS 191
>gi|294871818|ref|XP_002766057.1| protein arginine methyltransferase, putative [Perkinsus marinus
ATCC 50983]
gi|239866622|gb|EEQ98774.1| protein arginine methyltransferase, putative [Perkinsus marinus
ATCC 50983]
Length = 340
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE-SKNKKA 111
D + R + D+ +FQ +D+GSG G I S+ + V +E S+ +
Sbjct: 35 DAYRRAILDNAHLFQ----GKTVLDVGSGTG----ILSMFAAQAGAEHVYGVECSEIVEV 86
Query: 112 SFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R ++E + D+I +
Sbjct: 87 ARAVAAANGFGDRITYIEGEVEEVQLPVDKVDIIVS 122
>gi|238852660|ref|ZP_04643070.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
202-4]
gi|238834806|gb|EEQ27033.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
202-4]
Length = 315
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +D+G+G G I +I S + V + ++ + + +
Sbjct: 169 LAMERALVKPMSVLDIGTGSG----ILAIAASKLGASHVLGTDISDEAVTAAKENIALND 224
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEY 159
+ + D+I A LA D LLE
Sbjct: 225 VNNINVR-KANLLKDIDDKYDLIVANILA--DILLEL 258
>gi|268680052|ref|YP_003304483.1| modification methylase, HemK family [Sulfurospirillum deleyianum
DSM 6946]
gi|268618083|gb|ACZ12448.1| modification methylase, HemK family [Sulfurospirillum deleyianum
DSM 6946]
Length = 273
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI-------------ESKNKKA 111
+ + P + +++G G G I+ ++ L ++ V++ +K+
Sbjct: 104 LAKTLPKEAHIVEIGCGSGIISIMLALMLPDVKITAVDISNEALHVSQKNAVKHGVSKRI 163
Query: 112 SFLR 115
+F++
Sbjct: 164 AFVQ 167
>gi|220907156|ref|YP_002482467.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
gi|219863767|gb|ACL44106.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
Length = 283
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 25/88 (28%), Gaps = 13/88 (14%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSS-----IEGGLVNLIESKNKKASFLRYVVQ 119
V ++ P +DLG G G ++ ++ L K +
Sbjct: 94 VSKIQGQPRRMLDLGCGTGSTTLLLKQAFPQTEVIGLDLSPYMLFMGDRKATA------- 146
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + DV++A
Sbjct: 147 -AGLEIQFIQGDATQTGFPSASFDVVTA 173
>gi|184154904|ref|YP_001843244.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956]
gi|183226248|dbj|BAG26764.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956]
Length = 283
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 16/82 (19%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+ E+ V DS+ +DLG+G G GI +++ + V L +
Sbjct: 97 TETEELVEW-VLDSM----PADKELKVLDLGTGSGVIGITLALERPKWQ---VTLSD--- 145
Query: 109 KKASFLRYVVQKTAARGKVFAC 130
+ K A +
Sbjct: 146 -----ISAAALKIALTNQRLHG 162
>gi|17224292|gb|AAL36933.1|AF213481_1 gamma-tocopherol methyltransferase [Perilla frutescens]
Length = 369
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 9/109 (8%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHP-----YPSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
VS S IR +E+SLR P P +D+G G G + + +
Sbjct: 114 VSISDHRAAQIRMIEESLRFASFSPITTTEKPKNIVDVGCGIGGSSRYLARKYGAKLSRA 173
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
+ L + + + + GKV P D++ +
Sbjct: 174 ITLSSPVQAQRA--QQLADAQGLNGKVSFEVADALNQPFPEGKFDLVWS 220
>gi|113476020|ref|YP_722081.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101]
gi|110167068|gb|ABG51608.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101]
Length = 439
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 12/106 (11%)
Query: 47 SSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLGSGGGFPGIITSIQLSSIEGGL 100
S + H + + + L + +D G G+ ++ + G
Sbjct: 29 SPKDDYELLFLH--NFITPYYLRNQKVIETKGKMILDAACGSGYKSLVLAEANP---GAK 83
Query: 101 VNLIESKNKKASFLRYVVQKTAARGKVFAC-RIQEAPQMITTCDVI 145
+ I+ K R +Q F I+E P + D I
Sbjct: 84 IVGIDISEKSVELARQRLQYHGFDNAEFHVLSIEELPSLGLKFDYI 129
>gi|302185078|ref|ZP_07261751.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae pv. syringae 642]
Length = 302
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI + E V L + +++ +
Sbjct: 121 WLADEPARILDLCTGSGCIGIACAEVFPEAE---VALADLSYDALEVANQNIERHGMEDR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFDGLPGQRFDLIVS 199
>gi|294791813|ref|ZP_06756961.1| DNA mismatch repair protein MutS [Veillonella sp. 6_1_27]
gi|294457043|gb|EFG25405.1| DNA mismatch repair protein MutS [Veillonella sp. 6_1_27]
Length = 877
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADL 153
++ + ++ +K+K + + Q+ K+ +QE +ARALADL
Sbjct: 506 PELKEFEIKILSAKDKIIALEHELYQQLRNDIKLVIKDVQE-----------TARALADL 554
Query: 154 DTLLEYSF 161
D L +
Sbjct: 555 DVLCSLAL 562
>gi|295837555|ref|ZP_06824488.1| methyltransferase [Streptomyces sp. SPB74]
gi|197698363|gb|EDY45296.1| methyltransferase [Streptomyces sp. SPB74]
Length = 338
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 10/102 (9%)
Query: 53 DFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
+ H+ S+ L P +DLGSG G + V+ ++
Sbjct: 90 EILAAHIA-SITDWLPLTAAPRHIVDLGSGTGAGTFALLDRFPEAHVTAVDSSAPHLQR- 147
Query: 112 SFLRYVVQKTAARGKVFAC----RIQEAPQMITTCDVISARA 149
LR G+V + P D++ A A
Sbjct: 148 --LREKACAAGLDGRVRTVQADLDAADWPDF-GAYDLVWASA 186
>gi|119717114|ref|YP_924079.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Nocardioides sp. JS614]
gi|119537775|gb|ABL82392.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
[Nocardioides sp. JS614]
Length = 398
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 64 RVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ +L P P D+G+G G GI + V E+ ++ + +
Sbjct: 237 ALARLAPVPGEHLWDVGAGAGSIGIEWMRAHPTCTATAV---EADPERTERIGRNAARLG 293
Query: 123 ARG-KVFACRIQEAPQMITTCDVI 145
G +V R E + T D I
Sbjct: 294 VPGLEVVEGRAPEVLAALPTPDAI 317
>gi|189425799|ref|YP_001952976.1| methyltransferase small [Geobacter lovleyi SZ]
gi|189422058|gb|ACD96456.1| methyltransferase small [Geobacter lovleyi SZ]
Length = 245
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
D L + + +DLG+G G ++ + ++ ++ AS R
Sbjct: 30 LDPLLLCDFANASQETSIVDLGTGCGVMALVLARMAAAAHITAFEQDDA---AASLARQN 86
Query: 118 VQKTAA--RGKVFACRIQEAPQMIT--TCDVISA 147
V R V + + + + +CD++ +
Sbjct: 87 VGLNGLAERVTVLHDDVLQVRRHLPVSSCDLVVS 120
>gi|90420196|ref|ZP_01228104.1| ubiquinone biosynthesis O-methyltransferase [Aurantimonas
manganoxydans SI85-9A1]
gi|90335530|gb|EAS49280.1| ubiquinone biosynthesis O-methyltransferase [Aurantimonas
manganoxydans SI85-9A1]
Length = 249
Score = 33.9 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 41/142 (28%), Gaps = 20/142 (14%)
Query: 16 LNTYNVSRETLEKLEYFYFLFLKWSK--------KINLVSSSTVEDFWIRHV-EDSLRVF 66
+ + +E+ + W+ K N V + + + D +F
Sbjct: 4 PDGTTIDAAEVERFSRLAQEW--WNPVGKFKPLHKFNPVRLEYIREQLAMNFDLD---LF 58
Query: 67 QLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
P+ +D+G GGG + G V ++ R ++
Sbjct: 59 ADKPFDGLSVLDIGCGGGLICEPMARL-----GATVVGADASETNIEVARLHAAESGLAI 113
Query: 126 KVFACRIQEAPQMITTCDVISA 147
A + T DV+ A
Sbjct: 114 DYRATTAEAIAAGGETFDVVLA 135
>gi|330967251|gb|EGH67511.1| biotin biosynthesis protein BioC [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 269
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 13/101 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L PS W+DLG G G+ + + +G +++ E LR+ Q
Sbjct: 45 LSRLPAGLTPSRWLDLGCGTGYFNRALARTYNQSQGIALDIAEGM------LRHA-QPLG 97
Query: 123 ARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPW 163
A + P +C++I + L ++ +
Sbjct: 98 GAQHFVAGDAERLPLQGESCELI----FSSLAV--QWCADF 132
>gi|328771307|gb|EGF81347.1| hypothetical protein BATDEDRAFT_24236 [Batrachochytrium
dendrobatidis JAM81]
Length = 999
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 27 EKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPG 86
EKL F+ +WSK +N++S DF+ +H S + Q P +G P
Sbjct: 625 EKLVVFFIERREWSKALNIISRQDSIDFYYKH---SSILIQHIPKEV----IGLWMKVPN 677
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ + S+ + ++ AS+L Y+V +V
Sbjct: 678 LNPRFLMPSMLNLNIFGSANQTNLASYLEYLV-ANGNHDRVIH 719
>gi|282850161|ref|ZP_06259540.1| DNA mismatch repair protein MutS [Veillonella parvula ATCC 17745]
gi|282579654|gb|EFB85058.1| DNA mismatch repair protein MutS [Veillonella parvula ATCC 17745]
Length = 877
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADL 153
++ + ++ +K+K + + Q+ K+ +QE +ARALADL
Sbjct: 506 PELKEFEIKILSAKDKIIALEHELYQQLRNDIKLVIKDVQE-----------TARALADL 554
Query: 154 DTLLEYSF 161
D L +
Sbjct: 555 DVLCSLAL 562
>gi|228998906|ref|ZP_04158490.1| Biotin biosynthesis protein BioC [Bacillus mycoides Rock3-17]
gi|228760822|gb|EEM09784.1| Biotin biosynthesis protein BioC [Bacillus mycoides Rock3-17]
Length = 244
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 10/78 (12%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ ++ + ++ ES V KT + R +
Sbjct: 5 RILELGCGTGYLTEQLAVSFPNAAITAIDFAESMI--------AVAKTRNHVESVTFRCE 56
Query: 134 EAPQMI--TTCDVISARA 149
+ + + DVI + A
Sbjct: 57 DIEHLTLSESFDVIISSA 74
>gi|66045094|ref|YP_234935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae pv. syringae B728a]
gi|63255801|gb|AAY36897.1| Modification methylase HemK [Pseudomonas syringae pv. syringae
B728a]
gi|330973273|gb|EGH73339.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 302
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI + E V L + +++ +
Sbjct: 121 WLADEPARILDLCTGSGCIGIACAEVFPEAE---VALADLSYDALEVANQNIERHGMEDR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFDGLPGQRFDLIVS 199
>gi|120555271|ref|YP_959622.1| HemK family modification methylase [Marinobacter aquaeolei VT8]
gi|120325120|gb|ABM19435.1| [protein release factor]-glutamine N5-methyltransferase
[Marinobacter aquaeolei VT8]
Length = 285
Score = 33.9 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P + +DLG+G G + + + + V + + R Q V
Sbjct: 113 LPARASVLDLGTGTGAIALALASEQPGWQ---VMASDRVEDAVALARENSQSLGLPITVV 169
Query: 129 ACRIQEAPQMITTCDVISA 147
+ T D++ +
Sbjct: 170 KSHWFDQI-PAGTFDLLIS 187
>gi|315103172|gb|EFT75148.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
Length = 408
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVN-LIESKNKKASFLRYV 117
+ D+L L P ++ + S G G +I +E ++ L++ + + + V
Sbjct: 290 ILDALVDEPLRPDTTLTKAIESCQGIDGPAIAILG-RLETADIDPLVDLRRDRVAGFALV 348
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYS 160
+ + F +++A + RA+A+LD ++
Sbjct: 349 LDSNTFTARRFRSSLEQAEEHE--------RAVAELDD-AGWA 382
>gi|300813455|ref|ZP_07093799.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300512404|gb|EFK39560.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 275
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL-IESKNKKASFLRYVVQKTAARGKV 127
P + +D+G G G + + + + +V I S + K+ F + V + A +
Sbjct: 104 IPDGGVGLDVGCGSG--ALSIACAKKNPKATMVGCDIWSGSYKSEFSKKVCENNAKLEGL 161
Query: 128 FACRIQE-----APQMITTCDVISA 147
R +E P + D +++
Sbjct: 162 ENVRFEEGNAVILPFEDQSFDAVTS 186
>gi|302764116|ref|XP_002965479.1| hypothetical protein SELMODRAFT_84174 [Selaginella moellendorffii]
gi|300166293|gb|EFJ32899.1| hypothetical protein SELMODRAFT_84174 [Selaginella moellendorffii]
Length = 456
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 13/99 (13%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL------IESK 107
W +HV S + + + + GF G S+ L G++ L +
Sbjct: 89 VWEKHVRHSAHAKR---ENGLVVLVTGAAGFVGTHVSLALKKRGDGVIGLDNFNSYYDPF 145
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
K+A + +++K V I + DVI+
Sbjct: 146 LKRAR--QGLLEKQGV--FVVEGDINNIALLRKLFDVIT 180
>gi|302823103|ref|XP_002993206.1| hypothetical protein SELMODRAFT_136684 [Selaginella moellendorffii]
gi|300138976|gb|EFJ05726.1| hypothetical protein SELMODRAFT_136684 [Selaginella moellendorffii]
Length = 455
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 13/99 (13%)
Query: 54 FWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL------IESK 107
W +HV S + + + + GF G S+ L G++ L +
Sbjct: 89 VWEKHVRHSAHAKR---ENGLVVLVTGAAGFVGTHVSLALKKRGDGVIGLDNFNSYYDPF 145
Query: 108 NKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
K+A + +++K V I + DVI+
Sbjct: 146 LKRAR--QGLLEKQGV--FVVEGDINNIALLRKLFDVIT 180
>gi|302381613|ref|YP_003817436.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Brevundimonas subvibrioides ATCC 15264]
gi|302192241|gb|ADK99812.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Brevundimonas subvibrioides ATCC 15264]
Length = 294
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 4/90 (4%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D + IDLG+G G I+ ++ V + ++ + R
Sbjct: 104 ILDVAMLAFEPAQAFNVIDLGTGSG--AILLAVLSERPGSHGVG-TDISSEALAVARENA 160
Query: 119 QKTAARGKVFACRIQEAPQM-ITTCDVISA 147
G+ R + A + D++ +
Sbjct: 161 ANLGLDGRATFLRTEWAAGFGDASFDLVVS 190
>gi|262279636|ref|ZP_06057421.1| methyltransferase domain-containing protein [Acinetobacter
calcoaceticus RUH2202]
gi|262259987|gb|EEY78720.1| methyltransferase domain-containing protein [Acinetobacter
calcoaceticus RUH2202]
Length = 255
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK-VFA 129
++ +DLG GGG + LV + ++ + + + V
Sbjct: 42 EKAVVLDLGCGGGHVSYNVA-----PHADLVFAYDLSHEMLDTVSKAASQRKLKNIFVQQ 96
Query: 130 CRIQEAPQMITTCDVISAR 148
++ P DV+ +R
Sbjct: 97 GIAEDMPFSDHQFDVVISR 115
>gi|237809368|ref|YP_002893808.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187]
gi|237501629|gb|ACQ94222.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187]
Length = 350
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 10/89 (11%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ DSL +D+G G G G + V + + +
Sbjct: 204 LLDSLPAL-----SGDILDVGCGAGVIGAAICQRTPDAN---VVMTDVNALALLSATKTL 255
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +V A + + D I +
Sbjct: 256 EGNNLSAQVIASDM--FSDVEAKFDFIIS 282
>gi|33341098|gb|AAQ15115.1| putative methyltransferase [Rhizobium etli]
Length = 289
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 64 RVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK---ASFLRYVVQ 119
+ L P P +DLG+G G + +G V +E A + + +
Sbjct: 47 AIAALLPRPDGKALDLGAGRGISSYALA-----RDGWEVTALEPDPSDLVGAGAIHSLAR 101
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ V + ++ P T DV++ R +
Sbjct: 102 ASGLNFNVVSEFSEQLPFADNTFDVVNCRQV 132
>gi|34557036|ref|NP_906851.1| ribosomal protein L11 methyltransferase [Wolinella succinogenes DSM
1740]
gi|38605129|sp|P60095|PRMA_WOLSU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
Mtase
gi|34482751|emb|CAE09751.1| POSSIBLE RIBOSOMAL PROTEIN METHYLTRANSFERASE [Wolinella
succinogenes]
Length = 275
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 62 SLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L L +D+G G G I +I + +G +V + ++ + ++
Sbjct: 133 CLACLGALELEGKRVLDVGCGSG----ILAIASAK-KGAIVEMCDTDE---LAVGEALKN 184
Query: 121 TAARGKVFACR--IQEAPQMITTCDVISARALADLDTLLEYSFPWLYQK 167
+ +V A + I D+I A LA + +L PWL ++
Sbjct: 185 ASL-NQVIASKVWIGSVGDAEGEYDLIIANILAAILIMLS---PWLKER 229
>gi|332655313|ref|ZP_08421053.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Ruminococcaceae bacterium D16]
gi|332515818|gb|EGJ45428.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Ruminococcaceae bacterium D16]
Length = 287
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 6/80 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +DL +G G G+ + L L E + + V++ +V
Sbjct: 115 EGARVLDLCAGSGCVGLAIAANAPDCRVVLGELSEGALRVC---KQNVRRNELNARVTCL 171
Query: 131 RIQEAPQMITT---CDVISA 147
+ ++ DVI +
Sbjct: 172 SVNAMEPPASSLWDFDVIVS 191
>gi|307276393|ref|ZP_07557516.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX2134]
gi|306506873|gb|EFM76020.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX2134]
Length = 422
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 189 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 240
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 241 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 272
>gi|307274168|ref|ZP_07555376.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0855]
gi|307278603|ref|ZP_07559673.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0860]
gi|307291642|ref|ZP_07571517.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0411]
gi|312901125|ref|ZP_07760413.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0470]
gi|306497261|gb|EFM66803.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0411]
gi|306504663|gb|EFM73863.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0860]
gi|306509130|gb|EFM78192.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0855]
gi|311291797|gb|EFQ70353.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0470]
gi|315026838|gb|EFT38770.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX2137]
gi|315145333|gb|EFT89349.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX2141]
gi|315147173|gb|EFT91189.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX4244]
gi|315151068|gb|EFT95084.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0012]
gi|315168097|gb|EFU12114.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX1341]
gi|315171463|gb|EFU15480.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX1342]
gi|327534002|gb|AEA92836.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis OG1RF]
Length = 422
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 189 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 240
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 241 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 272
>gi|257078534|ref|ZP_05572895.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis JH1]
gi|257421498|ref|ZP_05598488.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis X98]
gi|256986564|gb|EEU73866.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis JH1]
gi|257163322|gb|EEU93282.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis X98]
Length = 396
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 163 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 214
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 215 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 246
>gi|302537678|ref|ZP_07290020.1| predicted protein [Streptomyces sp. C]
gi|302446573|gb|EFL18389.1| predicted protein [Streptomyces sp. C]
Length = 348
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
D+G G G ++ + V+ + + S R + + +V
Sbjct: 169 GGTVADVGCGVGHTTLLIAKAFPQ---ATVHGFDYSEEAVSIARRLADEAGLSDRVVFEV 225
Query: 132 IQEAPQMITTCDVIS 146
T D+++
Sbjct: 226 ASADDYPGTGYDLVT 240
>gi|256618383|ref|ZP_05475229.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis ATCC 4200]
gi|256597910|gb|EEU17086.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis ATCC 4200]
Length = 396
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 163 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 214
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 215 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 246
>gi|255974707|ref|ZP_05425293.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis T2]
gi|256855161|ref|ZP_05560522.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis T8]
gi|256964130|ref|ZP_05568301.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis HIP11704]
gi|257081495|ref|ZP_05575856.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis E1Sol]
gi|257084143|ref|ZP_05578504.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis Fly1]
gi|257087970|ref|ZP_05582331.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis D6]
gi|257417574|ref|ZP_05594568.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis AR01/DG]
gi|255967579|gb|EET98201.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis T2]
gi|256709674|gb|EEU24721.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis T8]
gi|256954626|gb|EEU71258.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis HIP11704]
gi|256989525|gb|EEU76827.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis E1Sol]
gi|256992173|gb|EEU79475.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis Fly1]
gi|256996000|gb|EEU83302.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis D6]
gi|257159402|gb|EEU89362.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis ARO1/DG]
gi|315028878|gb|EFT40810.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX4000]
Length = 396
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 163 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 214
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 215 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 246
>gi|218673656|ref|ZP_03523325.1| tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein
[Rhizobium etli GR56]
Length = 389
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L +D +GGG G ++ + G V+ ++ K+ + + +++ R
Sbjct: 188 LAKDGEQILDYCAGGG--GKTLAMAAAMQNKGQVHAYDADRKRLAPIIERLKRAGTRNVQ 245
Query: 128 FACRIQEAPQMITTCDVI 145
+ + CD +
Sbjct: 246 VHDDARGLSGLAGRCDKV 263
>gi|194336187|ref|YP_002017981.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Pelodictyon phaeoclathratiforme BU-1]
gi|194308664|gb|ACF43364.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Pelodictyon phaeoclathratiforme BU-1]
Length = 299
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 39/107 (36%), Gaps = 10/107 (9%)
Query: 48 SSTVEDFWIRHVEDSLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL-IE 105
+ + V D+L + + + +D+G+G G + + + ++ +E
Sbjct: 102 PRPETELLVEQVLDALGMTGRGGSRKAKILDIGTGSGCIAVTLAKLFPELTVSAIDCSLE 161
Query: 106 SKN-KKASFLRYVVQKTAARGKVFACRIQEA----PQMITTCDVISA 147
+ + + L++ V+ + + T+ D+I +
Sbjct: 162 ALEVARINVLKHGVES---QVSCIHADFFDEFFATRLPETSYDLIVS 205
>gi|220924672|ref|YP_002499974.1| type 11 methyltransferase [Methylobacterium nodulans ORS 2060]
gi|219949279|gb|ACL59671.1| Methyltransferase type 11 [Methylobacterium nodulans ORS 2060]
Length = 229
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 32/109 (29%), Gaps = 12/109 (11%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL + +++G G G I S V++ E KA ++
Sbjct: 49 SLAIEAAERVGGRVLEVGVGTG---ISLPAYRRSTRLFGVDISEPMLAKARERVRALRLQ 105
Query: 122 AARGKVFACRIQEAPQMITTCDVISAR----AL----ADLDTLLEYSFP 162
G + DVI A+ A+ A LD P
Sbjct: 106 NVEGLAV-MDAEHLDFPDGAFDVIVAQYVVTAVPNPEAALDEFARVVRP 153
>gi|218528952|ref|YP_002419768.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
chloromethanicum CM4]
gi|218521255|gb|ACK81840.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
chloromethanicum CM4]
Length = 245
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 21/82 (25%), Gaps = 5/82 (6%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
ID+G GGG + G V ++ + R +
Sbjct: 56 APFPLEGLSVIDIGCGGGVLSEPLARL-----GATVTGLDPATGNVAAARAHAEAEGLTI 110
Query: 126 KVFACRIQEAPQMITTCDVISA 147
I+ D++ A
Sbjct: 111 DYRDETIEAVAARGERFDIVLA 132
>gi|2792343|gb|AAC01738.1| C-27 O-methyltransferase [Amycolatopsis mediterranei S699]
Length = 272
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
T+E+ R + D L +D+G G G P +I++++ +V I K
Sbjct: 39 TLEEATTR-LTDRLAGMLPLRAGDRLLDIGCGNGEP----AIRMATANDVMVTGISISEK 93
Query: 110 KASFLRYVVQKTAARGKVF--ACRIQEAPQMITTCDVISA 147
+ K +V E P + DV+ A
Sbjct: 94 QVERANDRAYKADVDDRVVFEYADAMELPYPDASFDVVWA 133
>gi|148549910|ref|YP_001270012.1| precorrin-6y C5,15-methyltransferase subunit CbiE [Pseudomonas
putida F1]
gi|148513968|gb|ABQ80828.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Pseudomonas putida F1]
Length = 403
Score = 33.9 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Query: 63 LRVFQLHPYPSIWI-DLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+ + +L P P + D+G+G G GI + IE+ + + +
Sbjct: 239 ITLARLAPQPGELLWDVGAGCGSIGIEWMRAHPACRALA---IEADEGRQGLIEHNRDAL 295
Query: 122 AARG-KVFACRIQEAPQMITTCDVI-----SARA 149
G ++ + A Q + D I RA
Sbjct: 296 GVPGLQLVRGKAPAALQGLEQPDAIFIGGGVTRA 329
>gi|322834105|ref|YP_004214132.1| methyltransferase type 11 [Rahnella sp. Y9602]
gi|321169306|gb|ADW75005.1| Methyltransferase type 11 [Rahnella sp. Y9602]
Length = 256
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L + IDLG G G + + + + V + ++ + +
Sbjct: 34 LHRLAGLLAPYNEARVIDLGCGAGHASFVAAGVVKN-----VIAYDLSSQMLDVVAQAAR 88
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISAR 148
V + P + DVI +R
Sbjct: 89 DKQLTNITVQQGVAESLPFDDRSADVIISR 118
>gi|255971707|ref|ZP_05422293.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis T1]
gi|256956864|ref|ZP_05561035.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis DS5]
gi|257088647|ref|ZP_05583008.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis CH188]
gi|255962725|gb|EET95201.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis T1]
gi|256947360|gb|EEU63992.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis DS5]
gi|256997459|gb|EEU83979.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis CH188]
Length = 401
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 168 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 219
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 220 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 251
>gi|268555584|ref|XP_002635781.1| Hypothetical protein CBG10437 [Caenorhabditis briggsae]
gi|187031045|emb|CAP29857.1| hypothetical protein CBG_10437 [Caenorhabditis briggsae AF16]
Length = 362
Score = 33.9 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V +L +D+G G GF + + Q +++ K+A +
Sbjct: 166 VEKLEAGGVRVLDVGCGSGFHSSLLAEQYPKAHFVGLDIGSDAIKQAKERKTKAGAVFNN 225
Query: 125 GKVFACRIQEAPQMI-TTCDVI 145
+ C + P++ + D++
Sbjct: 226 LEFIECDAGKMPEIWTDSFDLV 247
>gi|303391633|ref|XP_003074046.1| hypothetical WD40 domain-containing protein [Encephalitozoon
intestinalis ATCC 50506]
gi|303303195|gb|ADM12686.1| hypothetical WD40 domain-containing protein [Encephalitozoon
intestinalis ATCC 50506]
Length = 280
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 42 KINLVSSSTVEDFWIRHV----EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
K L + + + WI+ + D+L + +D+G+ I I+
Sbjct: 2 KYKLTAILKIHNSWIKSLDIDPYDALLASSSMDGTTRIVDIGTKQLLATIPLKSVCEEIK 61
Query: 98 GGLVN------LIESKNK 109
++ L++ K
Sbjct: 62 FSKIHPYTFCALLDGLIK 79
>gi|302680553|ref|XP_003029958.1| hypothetical protein SCHCODRAFT_110242 [Schizophyllum commune H4-8]
gi|300103649|gb|EFI95055.1| hypothetical protein SCHCODRAFT_110242 [Schizophyllum commune H4-8]
Length = 688
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 87 IITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
I ++ +++ G + + + +A R + +T+ G+ F R A Q S
Sbjct: 526 IRLTLLAPAVDVGRLADLATVMNRAGITRDALVRTSPNGREFVARFANAEQ--------S 577
Query: 147 ARALADLDTLL 157
ARA+A L TL
Sbjct: 578 ARAVAHLPTLS 588
>gi|218893884|ref|YP_002442753.1| putative methyltransferase [Pseudomonas aeruginosa LESB58]
gi|218774112|emb|CAW29929.1| putative methyltransferase [Pseudomonas aeruginosa LESB58]
Length = 249
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 14/104 (13%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P +D+G+G G + + G V L E R + +
Sbjct: 38 LPERPLRVLDIGAGLGHMSLWLA-----ARGHRVTLAEPAQPMLDGARQRFAEAGQAAEF 92
Query: 128 FACRIQE-APQMITTCDVISARAL--------ADLDTLLEYSFP 162
QE Q+ D++ A+ A L L + P
Sbjct: 93 IQAPWQELLGQLTEPYDLVLCHAVLEWLAEPHAILPVLHQLCAP 136
>gi|182413408|ref|YP_001818474.1| methyltransferase type 11 [Opitutus terrae PB90-1]
gi|177840622|gb|ACB74874.1| Methyltransferase type 11 [Opitutus terrae PB90-1]
Length = 267
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + P +DLGSG GF + + QL+ G V ++ + R K+
Sbjct: 74 LAIASIRP-GETVLDLGSGAGFDCFLAARQLNGT--GRVIGVDMTPAMITKARANAAKSG 130
Query: 123 ARGKVFA-CRIQEAPQMITTCDVISA 147
F I+ P T+ D+I +
Sbjct: 131 FANVEFRLGEIEALPVADTSVDLILS 156
>gi|168335100|ref|ZP_02693209.1| precorrin-6x reductase [Epulopiscium sp. 'N.t. morphotype B']
Length = 652
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL QL P SI +D+G G G + ++ + + G V IE K + +R K
Sbjct: 485 SLSKLQLSP-DSIVMDIGGGTGSVSVEIALNVPN---GKVFTIEKNIKAIAAVRENKFKF 540
Query: 122 AARGKVFACRIQEAPQMITTCD 143
+ AP ++ D
Sbjct: 541 HVDNLEIIEGV--APAVLEPLD 560
>gi|116250091|ref|YP_765929.1| methyltransferase [Rhizobium leguminosarum bv. viciae 3841]
gi|115254739|emb|CAK05813.1| putative methyltransferase [Rhizobium leguminosarum bv. viciae
3841]
Length = 429
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L +D +GGG G ++ + G V+ ++ K+ + + +++ R
Sbjct: 228 LAHDGEQVLDYCAGGG--GKTLAMAAAMQNKGQVHAYDADRKRLAPIIERLKRAGTRNVQ 285
Query: 128 FACRIQEAPQMITTCDVI 145
+ + CD +
Sbjct: 286 VHDDARALSALAGRCDKV 303
>gi|70732475|ref|YP_262237.1| hemK protein [Pseudomonas fluorescens Pf-5]
gi|68346774|gb|AAY94380.1| hemK protein [Pseudomonas fluorescens Pf-5]
Length = 276
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P+ +DLG+G G + + + + + V ++ + + Q+
Sbjct: 109 PATVLDLGTGSGAIALALASERPAWQ---VTAVDRVLEAVALAERNRQRLQLDNVSVLSS 165
Query: 132 IQEAPQMITTCDVISA 147
+ D+I +
Sbjct: 166 HWFSSIESRRFDLIIS 181
>gi|15599984|ref|NP_253478.1| hypothetical protein PA4790 [Pseudomonas aeruginosa PAO1]
gi|107103888|ref|ZP_01367806.1| hypothetical protein PaerPA_01004959 [Pseudomonas aeruginosa PACS2]
gi|116052937|ref|YP_793254.1| hypothetical protein PA14_63310 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296391619|ref|ZP_06881094.1| hypothetical protein PaerPAb_25857 [Pseudomonas aeruginosa PAb1]
gi|9951056|gb|AAG08176.1|AE004892_7 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115588158|gb|ABJ14173.1| putative methyltransferase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 249
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 14/104 (13%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P +D+G+G G + + G V L E R + +
Sbjct: 38 LPERPLRVLDIGAGLGHMSLWLA-----ARGHRVTLAEPAQPMLDGARQRFAEAGQAAEF 92
Query: 128 FACRIQE-APQMITTCDVISARAL--------ADLDTLLEYSFP 162
QE Q+ D++ A+ A L L + P
Sbjct: 93 IQAPWQELLGQLTEPYDLVLCHAVLEWLAEPHAILPVLHQLCAP 136
>gi|332296619|ref|YP_004438542.1| Methyltransferase type 11 [Thermodesulfobium narugense DSM 14796]
gi|332179722|gb|AEE15411.1| Methyltransferase type 11 [Thermodesulfobium narugense DSM 14796]
Length = 188
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 31/100 (31%), Gaps = 9/100 (9%)
Query: 49 STVEDFW-IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK 107
+ F ++ V D + + +DLG GGG I + + G + ++
Sbjct: 3 KDISQFIDVKRVLDEI----IIKDDLRILDLGCGGGAISIPCAKM---LTKGTIFAVDKN 55
Query: 108 NKKASF-LRYVVQKTAARGKVFACRIQEAPQMITTCDVIS 146
+ + L + ++ D++
Sbjct: 56 TEVLNIMLNRAKSENINNLIALNSSFEDLEFQEEYFDLVI 95
>gi|330954447|gb|EGH54707.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas syringae Cit 7]
Length = 302
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI + E V L + +++ +
Sbjct: 121 WLADEPARILDLCTGSGCIGIACADVFPEAE---VALADLSYDALEVANQNIERHGMEDR 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFDGLPGQRFDLIVS 199
>gi|321259083|ref|XP_003194262.1| arginine N-methyltransferase 3 [Cryptococcus gattii WM276]
gi|317460733|gb|ADV22475.1| Arginine N-methyltransferase 3, putative [Cryptococcus gattii
WM276]
Length = 593
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG--KVFA 129
++ +D+G G G I S+ + V IE+ R +QK V
Sbjct: 256 GAVVMDVGCGTG----ILSMLAAKAGAKHVYAIEASGLAVKA-RENIQKNGFANVITVIQ 310
Query: 130 CRIQEAPQMITTCDVISA 147
++++ + DVI +
Sbjct: 311 GKVEDIQLPVKEVDVIVS 328
>gi|309789884|ref|ZP_07684462.1| Ribosomal RNA small subunit methyltransferase C [Oscillochloris
trichoides DG6]
gi|308228091|gb|EFO81741.1| Ribosomal RNA small subunit methyltransferase C [Oscillochloris
trichoides DG6]
Length = 390
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
P +D+G G G + ++ V++++ + R Q+ +G+V
Sbjct: 248 LPPGGRVLDVGCGYG----PIGLTAAAAGAAWVDMVDVNMLAVAAARSNAQRYYLKGEVI 303
Query: 129 ACRIQEAPQMITTCDVISA 147
A E T DVI +
Sbjct: 304 AANGLETLAGR-TYDVIIS 321
>gi|294892389|ref|XP_002774039.1| protein arginine N-methyltransferase, putative [Perkinsus marinus
ATCC 50983]
gi|239879243|gb|EER05855.1| protein arginine N-methyltransferase, putative [Perkinsus marinus
ATCC 50983]
Length = 339
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FAC 130
+ +D+G G G ++ + + V ES + A +VQ +G V
Sbjct: 71 GKVVLDVGCGTGVLSMLCAKICEPAQIIAVEATESTARIA---EALVQHNGLQGVVTVVN 127
Query: 131 RIQEAPQMITTCDVISA 147
R E + D I +
Sbjct: 128 RPVEMLDLSAPVDAIVS 144
>gi|228992860|ref|ZP_04152785.1| Biotin biosynthesis protein BioC [Bacillus pseudomycoides DSM
12442]
gi|228766909|gb|EEM15547.1| Biotin biosynthesis protein BioC [Bacillus pseudomycoides DSM
12442]
Length = 244
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 10/78 (12%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
++LG G G+ ++ + ++ ES V KT + R +
Sbjct: 5 RILELGCGTGYLTEQLAVSFPNAAITAIDFAESMI--------AVAKTRNHVESVTFRCE 56
Query: 134 EAPQMI--TTCDVISARA 149
+ + + DVI + A
Sbjct: 57 DIEHLTLSESFDVIISSA 74
>gi|242779831|ref|XP_002479468.1| ubiE/COQ5 methyltransferase, putative [Talaromyces stipitatus ATCC
10500]
gi|218719615|gb|EED19034.1| ubiE/COQ5 methyltransferase, putative [Talaromyces stipitatus ATCC
10500]
Length = 431
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 27/90 (30%), Gaps = 5/90 (5%)
Query: 60 EDSLR-VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+S + +D+G G G + + + + + E +A R +
Sbjct: 28 LNSAAYILPHLKPDMEILDIGCGPGTITVDLANYVPQGHITGLEMAEGVLPQA---RALA 84
Query: 119 QKTAARGKVF-ACRIQEAPQMITTCDVISA 147
++ + F T D++
Sbjct: 85 EEKGVKNIDFVVGDANALSYPDQTFDLVLC 114
>gi|116180796|ref|XP_001220247.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185323|gb|EAQ92791.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 333
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 9/100 (9%)
Query: 51 VEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK 110
++ R +++ + I +D+G G G I S+ + V ++
Sbjct: 28 KDEVRTRSYMNAIVQNKHIFKDKIVLDVGCGTG----ILSMFAAKAGAKHVIGVDMST-- 81
Query: 111 ASF-LRYVVQKTAARGKV--FACRIQEAPQMITTCDVISA 147
F R +V+ K+ +++E D+I +
Sbjct: 82 IIFKAREIVKVNGLSDKITLIQGKMEEIEMPFPKVDIIIS 121
>gi|119775697|ref|YP_928437.1| hemK family protein [Shewanella amazonensis SB2B]
gi|119768197|gb|ABM00768.1| hemK family protein [Shewanella amazonensis SB2B]
Length = 285
Score = 33.9 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 8/80 (10%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA-RGKV 127
P + +D+G+G G + + + + + ++ + + + ++ + ++
Sbjct: 112 LPDNARVLDMGTGTGAIALALASERPNWR---ITALDKVDDAVALAKANREQLGLSQVEI 168
Query: 128 FACRIQEAPQMITTCDVISA 147
A + D+I +
Sbjct: 169 LQSDWFSAVR-DADFDLIVS 187
>gi|331702139|ref|YP_004399098.1| Cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
buchneri NRRL B-30929]
gi|329129482|gb|AEB74035.1| Cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
buchneri NRRL B-30929]
Length = 394
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
RH+ L + +D+GSG G + + + ++ + L ++ + +
Sbjct: 153 DRHILHKLNPV----AGNTLLDIGSGWGT-LLFMAAEDFDLKATGITL---SQEQYDYTK 204
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+++ GKV +++ ++ + +++
Sbjct: 205 QQIKERHLEGKVDVL-LEDYREVKGQFNYVTS 235
>gi|300861969|ref|ZP_07108049.1| methyltransferase domain protein [Enterococcus faecalis TUSoD Ef11]
gi|295112504|emb|CBL31141.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus sp.
7L76]
gi|300848494|gb|EFK76251.1| methyltransferase domain protein [Enterococcus faecalis TUSoD Ef11]
Length = 388
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 155 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 206
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 207 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 238
>gi|229546966|ref|ZP_04435691.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX1322]
gi|307269084|ref|ZP_07550445.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX4248]
gi|312903929|ref|ZP_07763099.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0635]
gi|312952604|ref|ZP_07771468.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0102]
gi|229307894|gb|EEN73881.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX1322]
gi|306514564|gb|EFM83118.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX4248]
gi|310629392|gb|EFQ12675.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0102]
gi|310632725|gb|EFQ16008.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0635]
gi|315031136|gb|EFT43068.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0017]
gi|315036018|gb|EFT47950.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0027]
gi|315156208|gb|EFU00225.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0043]
gi|315158647|gb|EFU02664.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0312]
gi|315160725|gb|EFU04742.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0645]
gi|315579323|gb|EFU91514.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0630]
gi|329577752|gb|EGG59178.1| Cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX1467]
Length = 422
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 189 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 240
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 241 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 272
>gi|218662910|ref|ZP_03518840.1| tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein
[Rhizobium etli IE4771]
Length = 429
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L +D +GGG G ++ + G V+ ++ K+ + + +++ R
Sbjct: 228 LAKDGEQILDYCAGGG--GKTLAMAAAMQNKGQVHAYDADRKRLAPIIERLKRAGTRNVQ 285
Query: 128 FACRIQEAPQMITTCDVI 145
+ + CD +
Sbjct: 286 VHDDARGLSGLAGRCDKV 303
>gi|124005415|ref|ZP_01690256.1| cyclopropane-fatty-acyl-phospholipid synthase superfamily
[Microscilla marina ATCC 23134]
gi|123989237|gb|EAY28815.1| cyclopropane-fatty-acyl-phospholipid synthase superfamily
[Microscilla marina ATCC 23134]
Length = 285
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 65 VFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+F P +D+GSG G + + + V S +K+ + + + +
Sbjct: 61 LFSHIPEGVKTILDVGSGTG--KVAEQLIKKGYQVDCV----SPSKRLT--ARIKELLSD 112
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ +VF R ++ ++ D++
Sbjct: 113 KAEVFHGRYEDV-KIDKKYDLV 133
>gi|40217433|emb|CAE46366.1| probable methyltransferase [uncultured archaeon]
gi|268323816|emb|CBH37404.1| putative methyltransferase [uncultured archaeon]
Length = 181
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 8/86 (9%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
R+ +D G G G +I L G V ++ ++ ++
Sbjct: 15 CARILGAEEEKRKILDSGCGSG----KLAIYLGEETGCDVTGVDPGRERI----EKAREK 66
Query: 122 AARGKVFACRIQEAPQMITTCDVISA 147
++ +E T DV+ +
Sbjct: 67 SSSVTFEVQPAEETTFADNTFDVVVS 92
>gi|86356401|ref|YP_468293.1| SAM-dependent methyltransferase protein [Rhizobium etli CFN 42]
gi|86280503|gb|ABC89566.1| probable SAM-dependent methyltransferase protein [Rhizobium etli
CFN 42]
Length = 286
Score = 33.9 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 64 RVFQLHPYP-SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKK---ASFLRYVVQ 119
+ L P P +DLG+G G + +G V +E A + + +
Sbjct: 44 AIAALLPRPDGKALDLGAGRGISSYALA-----RDGWEVTALEPDPSDLVGAGAIHSLAR 98
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISARAL 150
+ V + ++ P T DV++ R +
Sbjct: 99 ASGLNFNVVSEFSEQLPFADNTFDVVNCRQV 129
>gi|333025546|ref|ZP_08453610.1| putative methyltransferase type 12 [Streptomyces sp. Tu6071]
gi|332745398|gb|EGJ75839.1| putative methyltransferase type 12 [Streptomyces sp. Tu6071]
Length = 308
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 4/99 (4%)
Query: 53 DFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
+ H+ SL L P +DLGSG G + V+ ++
Sbjct: 60 EVLASHIA-SLTDWLPLTAAPRHIVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRL 118
Query: 112 SFLRYVVQKTAARGKVFACRIQEAP-QMITTCDVISARA 149
+ R + + A + D++ A A
Sbjct: 119 RE-KACAAGLDGRVRTVHADLDAAAWPELGAPDLVWASA 156
>gi|317503386|ref|ZP_07961430.1| metallothionein SmtA [Prevotella salivae DSM 15606]
gi|315665481|gb|EFV05104.1| metallothionein SmtA [Prevotella salivae DSM 15606]
Length = 231
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + + +D+G+G G ++ + + E + I+ + + V
Sbjct: 25 DGVLLGAWSRGGKRLLDIGTGTGLIAMMMAQRFPEAE---IVAIDIDEEACLQAKENVAN 81
Query: 121 T--AARGKVFACRIQEAPQMITTCDVISA 147
+ A R +V +Q+ D I +
Sbjct: 82 SPFATRVRVMHTSLQQ-YDGENCFDCIVS 109
>gi|312881233|ref|ZP_07741031.1| biotin synthesis protein BioC [Vibrio caribbenthicus ATCC BAA-2122]
gi|309371125|gb|EFP98579.1| biotin synthesis protein BioC [Vibrio caribbenthicus ATCC BAA-2122]
Length = 267
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 15/95 (15%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+ + +DLG G G+ + G V ++ K L ++ G
Sbjct: 49 PTNLEGATVLDLGCGTGYFSLKLK-----ARGANVICVDLSEKM---LLKATERCGHEGV 100
Query: 127 V-FACRIQEAPQMITTCDVISARALADLDTLLEYS 160
V + P + D I + L L++
Sbjct: 101 VYIRADAENLPIAFHSVDFI----FSSLA--LQWC 129
>gi|306829790|ref|ZP_07462979.1| phosphatidylethanolamine N-methyltransferase [Streptococcus mitis
ATCC 6249]
gi|304428141|gb|EFM31232.1| phosphatidylethanolamine N-methyltransferase [Streptococcus mitis
ATCC 6249]
Length = 249
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 21/125 (16%)
Query: 27 EKLEYFYFLFLKW------SKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGS 80
+L +Y + KW K I+ + +E+ + D+L V ++ +G+
Sbjct: 49 NRLARWYDMSEKWIGPLLHGKAIDKLRRDLMEEIEWK---DNLSVL--------YVSIGT 97
Query: 81 GGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT 140
G I +I L S++ V++ S KK + +KT ++F ++ P
Sbjct: 98 GQDLRYIPETIDLKSLDFVGVDISISMLKKCQ--KSCAKKTNL--QLFHACAEDLPFADN 153
Query: 141 TCDVI 145
+ D++
Sbjct: 154 SFDIV 158
>gi|300023791|ref|YP_003756402.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525612|gb|ADJ24081.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hyphomicrobium
denitrificans ATCC 51888]
Length = 417
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 9/91 (9%)
Query: 57 RHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY 116
RH+ L + +D+GSG G +I LS + G V + ++
Sbjct: 163 RHI----AAKLLVSEGASVLDIGSGWG----GLAIYLSDVCGADVTGLTLSPEQLKVAER 214
Query: 117 VVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ V R+Q+ + T D + +
Sbjct: 215 RANERKLTDHV-HFRLQDYRALEQTFDRVVS 244
>gi|229148510|ref|ZP_04276766.1| hypothetical protein bcere0011_880 [Bacillus cereus m1550]
gi|228634926|gb|EEK91499.1| hypothetical protein bcere0011_880 [Bacillus cereus m1550]
Length = 213
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 117 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|227519989|ref|ZP_03950038.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0104]
gi|227072537|gb|EEI10500.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0104]
Length = 422
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 189 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 240
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 241 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 272
>gi|332097564|gb|EGJ02543.1| methyltransferase domain protein [Shigella dysenteriae 155-74]
Length = 219
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 8/78 (10%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +D+G G G + + V + + + + +
Sbjct: 8 DASVLDMGCGAGHASFVAA-----QNVSAVVAYDLSAQMLDVVAQAAEARQLKNITTRQG 62
Query: 131 RIQEAPQMITTCDVISAR 148
+ P D++ +R
Sbjct: 63 YAESLPFADNAFDIVISR 80
>gi|300939150|ref|ZP_07153836.1| tellurite resistance protein TehB [Escherichia coli MS 21-1]
gi|300455923|gb|EFK19416.1| tellurite resistance protein TehB [Escherichia coli MS 21-1]
Length = 197
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 15/103 (14%)
Query: 49 STVEDFWIRH--VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES 106
+ + H V +S++V + P +DLG G G + + G V+ +
Sbjct: 10 TDKYELTRTHSEVLESVKVVK----PGKTLDLGCGNGRNSLYLA-----ANGYDVDAWDK 60
Query: 107 KNKKASFLRYVVQKTAARGKVFACRIQEAPQ--MITTCDVISA 147
+ + + R+ + D I +
Sbjct: 61 NAMSIANVERIKSIENLDN--LHTRVVDLNNLTFDGQYDFILS 101
>gi|298693872|gb|ADI97094.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 202
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Query: 66 FQLHPYP--SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ HP D+G G G G++ + + +++ ++ + + +
Sbjct: 53 LKTHPPGPSKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVEKNQKLNGI 109
Query: 124 RGKVFACRIQEAPQMITTCDVI 145
+ + + D I
Sbjct: 110 DNVIVKESDALSAVEDKSFDFI 131
>gi|255003637|ref|ZP_05278601.1| hypothetical protein AmarPR_05438 [Anaplasma marginale str. Puerto
Rico]
Length = 256
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 11/77 (14%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G G I ++ +++ + + + RG +C
Sbjct: 44 DGKKVLDVGCGTGHVGAIIG------NRCELSQVDASQEMCN-----IANKKIRGITVSC 92
Query: 131 RIQEAPQMITTCDVISA 147
++ P DV+++
Sbjct: 93 DMENMPFPDGFFDVVTS 109
>gi|254995447|ref|ZP_05277637.1| hypothetical protein AmarM_05978 [Anaplasma marginale str.
Mississippi]
Length = 255
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 11/77 (14%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G G I ++ +++ + + + RG +C
Sbjct: 44 DGKKVLDVGCGTGHVGAIIG------NRCELSQVDASQEMCN-----IANKKIRGITVSC 92
Query: 131 RIQEAPQMITTCDVISA 147
++ P DV+++
Sbjct: 93 DMENMPFPDGFFDVVTS 109
>gi|222475644|ref|YP_002564061.1| hypothetical protein AMF_987 [Anaplasma marginale str. Florida]
gi|222419782|gb|ACM49805.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 266
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 11/77 (14%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G G I ++ +++ + + + RG +C
Sbjct: 54 DGKKVLDVGCGTGHVGAIIG------NRCELSQVDASQEMCN-----IANKKIRGITVSC 102
Query: 131 RIQEAPQMITTCDVISA 147
++ P DV+++
Sbjct: 103 DMENMPFPDGFFDVVTS 119
>gi|182439571|ref|YP_001827290.1| hypothetical protein SGR_5778 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468087|dbj|BAG22607.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 497
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
+DLG G G ++ + +G V ++ + A R + +V
Sbjct: 45 VLDLGCGTGSLSLLAA-----GQGHRVTAVDRSPRMAD--RARAKLAGTGAEVLVGDAAR 97
Query: 135 APQMITTCDVISAR 148
P DV+ AR
Sbjct: 98 PPVGERVFDVVVAR 111
>gi|108797075|ref|YP_637272.1| methyltransferase type 11 [Mycobacterium sp. MCS]
gi|119866160|ref|YP_936112.1| methyltransferase type 11 [Mycobacterium sp. KMS]
gi|126432697|ref|YP_001068388.1| methyltransferase type 11 [Mycobacterium sp. JLS]
gi|108767494|gb|ABG06216.1| Methyltransferase type 11 [Mycobacterium sp. MCS]
gi|119692249|gb|ABL89322.1| Methyltransferase type 11 [Mycobacterium sp. KMS]
gi|126232497|gb|ABN95897.1| Methyltransferase type 11 [Mycobacterium sp. JLS]
Length = 235
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 69 HPYPSIWIDLGSGGGFPGIIT-SIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
P + +D+GSG G + V++ E +A V +
Sbjct: 76 VPVGGVALDVGSGPGNVTAALGRVVGPGGLALGVDISEPMLARA-----VRAEAGPNVGF 130
Query: 128 FACRIQEAPQMITTCDVISARALADLDTL 156
Q P + D + + +A L +
Sbjct: 131 IRADAQRLPLRDESVDAVVS--VAMLQLI 157
>gi|118400934|ref|XP_001032788.1| hypothetical protein TTHERM_00485750 [Tetrahymena thermophila]
gi|89287133|gb|EAR85125.1| hypothetical protein TTHERM_00485750 [Tetrahymena thermophila
SB210]
Length = 205
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 3 YCDSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKK 42
Y D+ S LR N L+ V ++KLE L L+ ++K
Sbjct: 45 YIDNQSGLRENEKLHQIRVQAARIQKLEERISLLLEENQK 84
>gi|37523046|ref|NP_926423.1| hypothetical protein gll3477 [Gloeobacter violaceus PCC 7421]
gi|35214049|dbj|BAC91418.1| gll3477 [Gloeobacter violaceus PCC 7421]
Length = 306
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 10/92 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
D L L P +D+G G + ++L FL
Sbjct: 125 FLDILS-AHLPEPPHTILDIGCSVGMSTFALQTAYPEAQVTGLDLS------PHFLAVAR 177
Query: 119 QKTAARGKVF---ACRIQEAPQMITTCDVISA 147
+ G+ ++ + D++ A
Sbjct: 178 HRAGRDGRTLIWRHAAAEQTGLPNHSVDLVCA 209
>gi|189499813|ref|YP_001959283.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Chlorobium phaeobacteroides BS1]
gi|189495254|gb|ACE03802.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Chlorobium phaeobacteroides BS1]
Length = 297
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 10/85 (11%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG 125
+D+G+G G ++ +I + V+ + ++ + + L R
Sbjct: 119 APAPESGPEILDIGTGSGCLAVLFAITVPDARITAVD-VSAEALEIAALNAEKHGVTERI 177
Query: 126 KVFACRIQE---APQMITTCDVISA 147
+ + ++ D+I +
Sbjct: 178 RFVQSDALHPGFSEKLAGRYDLIVS 202
>gi|46115450|ref|XP_383743.1| hypothetical protein FG03567.1 [Gibberella zeae PH-1]
Length = 346
Score = 33.9 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 6/85 (7%)
Query: 66 FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ-KTAAR 124
P +DLG G G I + + S E E + SF + + +
Sbjct: 91 LAPVNSPQRILDLGCGTGIWSIEMAEEFPSAEISS----EPGYSRNSFCVRLSRSRVPPN 146
Query: 125 GKVFACRIQEAPQMI-TTCDVISAR 148
I+ + D I +R
Sbjct: 147 CHFEVDDIERIWTWREESFDFIFSR 171
>gi|327474248|gb|EGF19655.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
SK408]
Length = 276
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 28/103 (27%), Gaps = 11/103 (10%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ L + + +D+G+G G + + + +
Sbjct: 89 LIPRPETEELVE------LILSENRESSLSILDIGTGSGAIALTLANSRPDWQ---ITAS 139
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ S Q EA + D+I +
Sbjct: 140 DLSGDALSLATENAQSCGLSLTFIQSDCFEA--ISGNFDIIVS 180
>gi|331698529|ref|YP_004334768.1| methyltransferase [Pseudonocardia dioxanivorans CB1190]
gi|326953218|gb|AEA26915.1| methyltransferase [Pseudonocardia dioxanivorans CB1190]
Length = 187
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 9/104 (8%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
++ + S + +DL +G G G+ ++ + V E
Sbjct: 21 TRPTS-DRVREALF--SALDADPGLDGARVLDLCAGSGALGLE-ALSRGAAHAVFV---E 73
Query: 106 SKNKKASFLRYVVQKTAARGK--VFACRIQEAPQMITTCDVISA 147
S K A+ LR V + G+ A DV+ A
Sbjct: 74 SDKKAANILRRNVSELGLGGEVVAATVAAALAGAPRGRFDVVLA 117
>gi|320162970|gb|EFW39869.1| arginine methyltransferase 4-PA [Capsaspora owczarzaki ATCC 30864]
Length = 678
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK--VF 128
+ +D+G+G G + S V IE+ A R +V++ G+ V
Sbjct: 261 EDKVVLDVGAGTG----VLSFFAIQAGARKVYAIEASAM-ADNTRLLVERNGLAGRIIVI 315
Query: 129 ACRIQEAPQMITTCDVISARALADLDTLL 157
+ +E ++ D+I + + TLL
Sbjct: 316 NAKAEEV-ELPEQVDLIIS---EPMGTLL 340
>gi|313109776|ref|ZP_07795714.1| putative methyltransferase [Pseudomonas aeruginosa 39016]
gi|310882216|gb|EFQ40810.1| putative methyltransferase [Pseudomonas aeruginosa 39016]
Length = 249
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 32/104 (30%), Gaps = 14/104 (13%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L P +D+G+G G + + G V L E R + +
Sbjct: 38 LPERPLRILDIGAGLGHMSLWLA-----ARGHRVTLAEPAQPMLDGARQRFAEAGQAAEF 92
Query: 128 FACRIQE-APQMITTCDVISARAL--------ADLDTLLEYSFP 162
QE Q+ D++ A+ A L L + P
Sbjct: 93 IQAPWQELLGQLTEPYDLVLCHAVLEWLAEPHAILPVLHQLCAP 136
>gi|300782581|ref|YP_003762872.1| methyltransferase type 11 [Amycolatopsis mediterranei U32]
gi|299792095|gb|ADJ42470.1| methyltransferase type 11 [Amycolatopsis mediterranei U32]
Length = 272
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
T+E+ R + D L +D+G G G P +I++++ +V I K
Sbjct: 39 TLEEATTR-LTDRLAGMLPLRAGDRLLDIGCGNGEP----AIRMATANDVMVTGISISEK 93
Query: 110 KASFLRYVVQKTAARGKVF--ACRIQEAPQMITTCDVISA 147
+ K +V E P + DV+ A
Sbjct: 94 QVERANDRAYKADVDDRVVFEYADAMELPYPDASFDVVWA 133
>gi|294781049|ref|ZP_06746400.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis PC1.1]
gi|294451852|gb|EFG20303.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis PC1.1]
gi|323479420|gb|ADX78859.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
[Enterococcus faecalis 62]
Length = 388
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 155 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 206
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 207 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 238
>gi|257452810|ref|ZP_05618109.1| precorrin-8W decarboxylase [Fusobacterium sp. 3_1_5R]
gi|317059351|ref|ZP_07923836.1| precorrin-8W decarboxylase [Fusobacterium sp. 3_1_5R]
gi|313685027|gb|EFS21862.1| precorrin-8W decarboxylase [Fusobacterium sp. 3_1_5R]
Length = 192
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ QLHP SI ID+G+G G GI + LS G V IE + K +R K
Sbjct: 24 SIAKLQLHP-NSILIDVGAGTGTIGIEAATYLSQ---GKVYAIEKEEKGLETIRKNAAKF 79
Query: 122 AARG-KVFACRIQEA 135
+ ++ + +A
Sbjct: 80 QLQNFELIHGKAPDA 94
>gi|253577170|ref|ZP_04854490.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843414|gb|EES71442.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 201
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
P + +D+G G G G+ + G V +I+ ++ + V
Sbjct: 55 IPEDAEVLDVGCGYGPIGLAAARL---ATKGHVTMIDVNSRAVELAKENAAANGVNNVTV 111
Query: 128 FACRIQEAPQMITTCDVI 145
+ A + DV+
Sbjct: 112 LESDLFSAIENR-KFDVV 128
>gi|228908645|ref|ZP_04072482.1| Methyltransferase type 11 [Bacillus thuringiensis IBL 200]
gi|228850986|gb|EEM95803.1| Methyltransferase type 11 [Bacillus thuringiensis IBL 200]
Length = 205
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS-FLRYVVQKTAARGKVFA 129
+ + +D+ +GGG + + + ++L E +KA F++ + A
Sbjct: 41 HNNRLLDVATGGGHVANMLAPMFEEV--VALDLTEQMLEKAKGFIKQNGHE---NVSFVA 95
Query: 130 CRIQEAPQMITTCDVISAR 148
++ P D I+ R
Sbjct: 96 GNAEDLPFADHFFDAITCR 114
>gi|154498173|ref|ZP_02036551.1| hypothetical protein BACCAP_02154 [Bacteroides capillosus ATCC
29799]
gi|150272720|gb|EDM99888.1| hypothetical protein BACCAP_02154 [Bacteroides capillosus ATCC
29799]
Length = 271
Score = 33.9 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFL---RYVVQKTAARG 125
+ +++G G G I ++ + ++ + + L + A+R
Sbjct: 101 YDGQGSLLEVGCGSGALSIRAALTWPETKVTGMDYWGAVYNYSKALCEKNAASEGVASRC 160
Query: 126 KVFACRIQEAPQMITTCDVISA 147
+ D + +
Sbjct: 161 VFRHGDANHLDFPDESFDAVIS 182
>gi|327462228|gb|EGF08555.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
SK1]
gi|327489583|gb|EGF21375.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
SK1058]
Length = 276
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 28/103 (27%), Gaps = 11/103 (10%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
L+ E+ L + + +D+G+G G + + + +
Sbjct: 89 LIPRPETEELVE------LILSENRESSLSILDIGTGSGAIALTLANSRPDWQ---ITAS 139
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ S Q EA + D+I +
Sbjct: 140 DLSGDALSLATENAQSCGLSLTFIQSDCFEA--ISGNFDIIVS 180
>gi|330811718|ref|YP_004356180.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327379826|gb|AEA71176.1| Putative methyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 276
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P + +DLG+G G + + + + + V ++ + + Q+
Sbjct: 102 LALLPATP--ARVLDLGTGSGAIALALASERPAWK---VTAVDRVLEAVALAERNRQRLD 156
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ T ++I +
Sbjct: 157 LHNVTVLSSHWFSALEDTRFELIIS 181
>gi|295706648|ref|YP_003599723.1| ribosomal protein L11 methyltransferase [Bacillus megaterium DSM
319]
gi|294804307|gb|ADF41373.1| ribosomal protein L11 methyltransferase [Bacillus megaterium DSM
319]
Length = 313
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 11/104 (10%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
SL+ + ID+G+G G + SI + + V ++ R ++
Sbjct: 165 SLQALERTVKAGDTVIDVGTGSG----VLSIGAALLGASNVQALDLDEVAVRSARENIEL 220
Query: 121 TAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWL 164
V + + D++ A + L E ++
Sbjct: 221 NQVGNVVTVGQNNLLQGIEGPVDIVVA------NILAEVIVRFV 258
>gi|259503161|ref|ZP_05746063.1| ribosomal protein L11 methyltransferase [Lactobacillus antri DSM
16041]
gi|259168876|gb|EEW53371.1| ribosomal protein L11 methyltransferase [Lactobacillus antri DSM
16041]
Length = 336
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 33/109 (30%), Gaps = 22/109 (20%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESK------NKKASFLRYV 117
+ Q+ ID+G+G G + SI + G V + KK L V
Sbjct: 187 ALEQVIRGGESLIDVGTGSG----VLSIAAKQLGAGQVAAYDVDDVAVQSAKKNLALNPV 242
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
+ T DVI A + L E P + Q
Sbjct: 243 ASDVRLGVNSL------LDGIHTQVDVIVA------NILAEIIVPLIPQ 279
>gi|229053947|ref|ZP_04195381.1| hypothetical protein bcere0026_870 [Bacillus cereus AH603]
gi|228721365|gb|EEL72886.1| hypothetical protein bcere0026_870 [Bacillus cereus AH603]
Length = 199
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + + + +++ + + ++ A
Sbjct: 50 IEAFQMPDVKGNVLDVGCGYGPIGLSLA---KEFQNREIYMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A ++ RI ++ + VI + RA
Sbjct: 103 ANNRIENIRILQSSVYENVDGKYAVILSNPPIRA 136
>gi|261380685|ref|ZP_05985258.1| methyltransferase domain protein [Neisseria subflava NJ9703]
gi|284796395|gb|EFC51742.1| methyltransferase domain protein [Neisseria subflava NJ9703]
Length = 371
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
Query: 60 EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D + L P D+G+G G + + L+ + ++ K + ++
Sbjct: 181 LDLIAQAPLAPNIQTAFDIGTGSG----VIAAILAKRGIPDIIATDTNPKAIACAIANLE 236
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ V I P+ T D+I
Sbjct: 237 RLGLDKAVNIQSIDLFPE--TCADLIVC 262
>gi|254512004|ref|ZP_05124071.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacteraceae
bacterium KLH11]
gi|221535715|gb|EEE38703.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacteraceae
bacterium KLH11]
Length = 248
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V ++ R +++ +
Sbjct: 66 RLLDIGCGGGLLSEPMARLGAE-----VVGADAAEGNLPVARIHAEQSGLDIDYRHTTAE 120
Query: 134 EAPQMITTCDVI 145
+ DV+
Sbjct: 121 DIAAAGEQFDVV 132
>gi|218231310|ref|YP_002364950.1| ybxB protein [Bacillus cereus B4264]
gi|218159267|gb|ACK59259.1| ybxB protein [Bacillus cereus B4264]
Length = 199
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 50 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 103 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 136
>gi|303240625|ref|ZP_07327140.1| Methyltransferase type 11 [Acetivibrio cellulolyticus CD2]
gi|302591862|gb|EFL61595.1| Methyltransferase type 11 [Acetivibrio cellulolyticus CD2]
Length = 226
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
D + V + + +D+G G G I+ S + +++ +S FL+ K
Sbjct: 28 DDILVKSMPNKRNQVLDIGCGSGNKSILLSKYFEHV--IGIDISDS------FLQIAEHK 79
Query: 121 TAARG----KVFACRIQEAPQMITTCDVISAR 148
A+G + ++ D+I +R
Sbjct: 80 KNAKGIKNIQFINMDAEKM-DFSEKFDMIISR 110
>gi|300856355|ref|YP_003781339.1| putative cobalt-precorrin-6Y C(15)-methyltransferase [Clostridium
ljungdahlii DSM 13528]
gi|300436470|gb|ADK16237.1| predicted cobalt-precorrin-6Y C(15)-methyltransferase [Clostridium
ljungdahlii DSM 13528]
Length = 188
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Query: 63 LRVFQLHPYPS-IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
L + +L P +D+G+G G + + G V +E + S + + K
Sbjct: 24 LSIAKLGIEPDFRVLDVGAGTGSVSVQMA---KICSKGQVVAVEKNEEALSVIEKNIDKF 80
Query: 122 AARG-KVFACRIQEAPQMITT-CDVI 145
V E + I D +
Sbjct: 81 NVNNLTVVKGEALEVEESIEPYFDAV 106
>gi|284045682|ref|YP_003396022.1| methyltransferase type 11 [Conexibacter woesei DSM 14684]
gi|283949903|gb|ADB52647.1| Methyltransferase type 11 [Conexibacter woesei DSM 14684]
Length = 274
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+ +D+ +G G I + G V + + R+ + + A
Sbjct: 47 EAEVLDVAAGTGNASIPAA-----QRGASVTASDLTPELLEAGRHRAEDEGVDLRWVAAD 101
Query: 132 IQEAPQMITTCDVISA 147
++ P + DV+ +
Sbjct: 102 AEQLPFDDESFDVVMS 117
>gi|251772746|gb|EES53308.1| Precorrin-6y C5,15-methyltransferase, CbiT [Leptospirillum
ferrodiazotrophum]
Length = 201
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 15/107 (14%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
SL L P +W D+G+G G GI + + ++ V +E L+ ++
Sbjct: 34 SLMKLDLRPGQVLW-DIGAGSGSVGIEAARLVPDLK---VIAVEKDPADYECLKKNIEAF 89
Query: 122 AARGKVFA--CRIQEAPQMITTCDVISARAL-----ADLDTLLEYSF 161
++ + EA D R + LL+Y
Sbjct: 90 GLGERIIPIFGKAPEALFQAAPPD----RVFIGGSGGRMADLLDYCL 132
>gi|210621682|ref|ZP_03292758.1| hypothetical protein CLOHIR_00703 [Clostridium hiranonis DSM 13275]
gi|210154661|gb|EEA85667.1| hypothetical protein CLOHIR_00703 [Clostridium hiranonis DSM 13275]
Length = 183
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 37/97 (38%), Gaps = 13/97 (13%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
++D+G+G G I +++ ++ V +E + +K +
Sbjct: 28 IENAKSFLDVGAGTGSVCIEAALKNPEMK---VVAVERHEHAVELIEANKEKFGVKNLEI 84
Query: 129 ACRIQEAP-QMITTCDVI----SARALADLDTLLEYS 160
+ AP + D + +A+ L+ +++++
Sbjct: 85 LE--EYAPFETDEKFDAVFIGGTAK---KLEEIVDWT 116
>gi|254459793|ref|ZP_05073209.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacterales
bacterium HTCC2083]
gi|206676382|gb|EDZ40869.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacteraceae
bacterium HTCC2083]
Length = 252
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 20/73 (27%), Gaps = 5/73 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + G V ++ + +++ +
Sbjct: 70 RILDIGCGGGLLSEPMARL-----GATVVGADAAESNIPVAQVHAEQSGLTIDYRCTTAE 124
Query: 134 EAPQMITTCDVIS 146
DV+
Sbjct: 125 ALADAGEQFDVVV 137
>gi|172037038|ref|YP_001803539.1| hypothetical protein cce_2123 [Cyanothece sp. ATCC 51142]
gi|171698492|gb|ACB51473.1| hypothetical protein cce_2123 [Cyanothece sp. ATCC 51142]
Length = 321
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 3/92 (3%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+RH + QL P +D+G G + V ++ +
Sbjct: 136 LRHNYHEILKQQLSSTPQRILDMGCSVGMSTFPLQAMYPDAK---VTGLDLSAYHLAVAH 192
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
Y Q+ + T+ D++SA
Sbjct: 193 YRSQERNLAIDWVHGAAEATNLPETSFDLVSA 224
>gi|170077427|ref|YP_001734065.1| SAM dependent methyltransferase [Synechococcus sp. PCC 7002]
gi|169885096|gb|ACA98809.1| SAM dependent methyltransferase [Synechococcus sp. PCC 7002]
Length = 222
Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIES---KNKKASFLR 115
D L V + +DLG+G I+ Q + +L +S +K
Sbjct: 33 FAD-LVVTTYSQETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSMLALGQK----N 87
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
V A+ ++ + P + DVI +
Sbjct: 88 VVAAGLTAQIELVYADAKNLPWPDQSFDVIIS 119
>gi|320102368|ref|YP_004177959.1| type 11 methyltransferase [Isosphaera pallida ATCC 43644]
gi|319749650|gb|ADV61410.1| Methyltransferase type 11 [Isosphaera pallida ATCC 43644]
Length = 266
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRY--VVQ 119
+ +D+GSG G + L+ G V ++ + + R +
Sbjct: 47 CALLGNALQPGVRVLDVGSGLG----GAAFHLAERFGAEVTGVDLAEEMIALTRERLADR 102
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISAR-ALADLDT 155
KT+ + + + A + DV+ +R A L
Sbjct: 103 KTSEKVRFLLGDVMTADLPLGGYDVVWSRDAFMHLAD 139
>gi|309803516|ref|ZP_07697609.1| methyltransferase small domain protein [Lactobacillus iners LactinV
11V1-d]
gi|309808222|ref|ZP_07702131.1| methyltransferase small domain protein [Lactobacillus iners LactinV
01V1-a]
gi|308164400|gb|EFO66654.1| methyltransferase small domain protein [Lactobacillus iners LactinV
11V1-d]
gi|308168510|gb|EFO70619.1| methyltransferase small domain protein [Lactobacillus iners LactinV
01V1-a]
Length = 204
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 LKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F+ +I
Sbjct: 111 ---DNVNIFSSDCYRNLDDQEQFGLI 133
>gi|307299352|ref|ZP_07579153.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915148|gb|EFN45534.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
Length = 202
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 62 SLRVFQ--LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
SL + + + +DLG G G GI ++ ++ +++ + + +F + +
Sbjct: 50 SLLLIENCILEGQESILDLGCGYGAVGITLKLEHPDLK---LHMSDVNTRALTFSKINAR 106
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ + +P T+ D I +
Sbjct: 107 DHNILADIRKGDLF-SPWEKTSFDSILS 133
>gi|254000255|ref|YP_003052318.1| methyltransferase small [Methylovorus sp. SIP3-4]
gi|253986934|gb|ACT51791.1| methyltransferase small [Methylovorus sp. SIP3-4]
Length = 331
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 6/80 (7%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA-ARGKV 127
P +D+G+G G I + E V ++ + R R ++
Sbjct: 148 QPTVRRAVDIGTGSGVGAIALAGLFPDAE---VFGVDINPHALALARVNAAANGCERVQM 204
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + D+I A
Sbjct: 205 LHSDL--LRDVAGEFDLIIA 222
>gi|227530645|ref|ZP_03960694.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Lactobacillus vaginalis ATCC 49540]
gi|227349426|gb|EEJ39717.1| ubiquinone/menaquinone biosynthesis methyltransferase
[Lactobacillus vaginalis ATCC 49540]
Length = 234
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 5/84 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + P +D+ G G I + +L V+ + K + KT
Sbjct: 44 LAGLEFKP-GIKALDVCCGTGDLAIALANRLPQGRVTGVDFNAAMLK----IAEQKAKTI 98
Query: 123 ARGKVFACRIQEAPQMITTCDVIS 146
+ + P + D+++
Sbjct: 99 PNLILINGDAMDLPLEDESFDIVT 122
>gi|242310513|ref|ZP_04809668.1| methyltransferase small [Helicobacter pullorum MIT 98-5489]
gi|239522911|gb|EEQ62777.1| methyltransferase small [Helicobacter pullorum MIT 98-5489]
Length = 230
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 9/83 (10%), Positives = 26/83 (31%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+++GSG G + + + + +IE K + ++ +
Sbjct: 23 ALNFLKKHQKILEVGSGSG----VLGMLCARDVEIDLMMIEKNPKMWELCQQNLRVNKIK 78
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
++ + + D I +
Sbjct: 79 AELLNGDFLQYDFLDLKFDCILS 101
>gi|198443327|pdb|3DTN|A Chain A, Crystal Structure Of Putative Methyltransferase-Mm_2633
From Methanosarcina Mazei .
gi|198443328|pdb|3DTN|B Chain B, Crystal Structure Of Putative Methyltransferase-Mm_2633
From Methanosarcina Mazei
Length = 234
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 7/87 (8%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + + +DLG+G G + LV++ E L +
Sbjct: 35 SVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKM------LEIAKNRF 88
Query: 122 AARGKVFACRIQEAP-QMITTCDVISA 147
KV + D++ +
Sbjct: 89 RGNLKVKYIEADYSKYDFEEKYDMVVS 115
>gi|254389163|ref|ZP_05004392.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197702879|gb|EDY48691.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 99
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISAR--ALADLD-TLLEYSFP 162
+ R +P+ D++ AR A A L L +++ P
Sbjct: 18 ELVQIPATTEGIRATLSPKRAAEFDLVVARTHA-AKLPQVLADWALP 63
>gi|186684296|ref|YP_001867492.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
gi|186466748|gb|ACC82549.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
Length = 386
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
P +D+G G + E V+ I+ + + R +
Sbjct: 195 PRKILDMGCSVGNSTLPYVDAYPDAE---VHAIDVGAPMLRYGHARAEALGKRVHFWQQN 251
Query: 132 IQEAPQMITTCDVISA 147
+ + D++ +
Sbjct: 252 AEHTNFPDESFDLVVS 267
>gi|126652833|ref|ZP_01724978.1| ribosomal protein L11 methyltransferase [Bacillus sp. B14905]
gi|126590369|gb|EAZ84489.1| ribosomal protein L11 methyltransferase [Bacillus sp. B14905]
Length = 313
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ ++ +D+G+G G I ++ + + ++ +++ + K +
Sbjct: 169 LEKVIKEGDTVVDIGTGSGVLSIGAALLGA--KNVHALDLDEVAVRSAQENVALNKVEDK 226
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
VF + + DV+ A
Sbjct: 227 VAVFHGNL--LDTVKEPADVVVA 247
>gi|85375734|ref|YP_459796.1| 3-demethylubiquinone-9 3-methyltransferase [Erythrobacter litoralis
HTCC2594]
gi|84788817|gb|ABC64999.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
[Erythrobacter litoralis HTCC2594]
Length = 240
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 28/101 (27%), Gaps = 19/101 (18%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D+G G G + + V +++ + +
Sbjct: 62 DKTALDVGCGAGLLCEPLARLGAD-----VTGVDAAAENIEAAQAHAVGIGLDIDYRHGE 116
Query: 132 IQEAPQMITTCDVISA----------RALADLDTLLEYSFP 162
+ E + D+++ RA L +L E P
Sbjct: 117 LAEWG--LGQFDLVTCLEVIEHVADKRAF--LASLAERLAP 153
>gi|20806671|ref|NP_621842.1| rRNA or tRNA methylase [Thermoanaerobacter tengcongensis MB4]
gi|20515121|gb|AAM23446.1| predicted rRNA or tRNA methylase [Thermoanaerobacter tengcongensis
MB4]
Length = 285
Score = 33.9 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 27/85 (31%), Gaps = 5/85 (5%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ + +D+G+G G I + + V ++ + +Y +K
Sbjct: 109 ALKRMKSGDLILDIGTGSGAIAISIAKLFPDCK---VYAVDVSEEALEVAKYNAEKLGVA 165
Query: 125 GKV--FACRIQEAPQMITTCDVISA 147
K+ I D+I +
Sbjct: 166 EKIIFIKSDIFSNIPQDVKFDLIVS 190
>gi|319946685|ref|ZP_08020919.1| methyltransferase domain protein [Streptococcus australis ATCC
700641]
gi|319746733|gb|EFV98992.1| methyltransferase domain protein [Streptococcus australis ATCC
700641]
Length = 197
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L +D+G G G + L +G +++ + +
Sbjct: 50 LSCLSFQ-QGETVLDVGCGYG----PLGLSLVKAQGIHATMVDVNTRALDLAQKNADLNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
K+F + + Q+ + D I + RA
Sbjct: 105 VEAKIFQSNVYD--QVEGSFDHIISNPPIRA 133
>gi|237740337|ref|ZP_04570818.1| methyltransferase [Fusobacterium sp. 2_1_31]
gi|229422354|gb|EEO37401.1| methyltransferase [Fusobacterium sp. 2_1_31]
Length = 369
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ V ++
Sbjct: 174 CIQLMREIEEPN-ILDIGSGSGAISIAIA---NELKSSSVTGLDINEDAIRLANENKVLN 229
Query: 122 AARGKVF-ACRIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 230 KVENVNFMKSDLFEKLDEDFKYDLIVS 256
>gi|239813380|ref|YP_002942290.1| methyltransferase type 12 [Variovorax paradoxus S110]
gi|239799957|gb|ACS17024.1| Methyltransferase type 12 [Variovorax paradoxus S110]
Length = 202
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 23/129 (17%)
Query: 47 SSSTVEDFWIRH----VEDSLR-VFQLHPYPSIWIDLGSGGG-----FPGIITSIQLSSI 96
S+ H +ED+LR + QL P +++GSG G + +++ +
Sbjct: 21 SAREYNAIVAGHRPAEIEDALRRMMQLVPAGGSVLEIGSGTGQDADFVEALGGAVRRTDA 80
Query: 97 EGGLVNLIESKNKKASFLRYVVQKTAAR--------GKVFACRIQEAPQMITTCDVISAR 148
++L + KK L V + R Q AP + D
Sbjct: 81 VQAFLDLQAERGKKGELLNVVTDALGGPYNAIVAMCVLIHVDRAQIAPVLRKVFD----- 135
Query: 149 ALADLDTLL 157
ALA L
Sbjct: 136 ALAPGGVFL 144
>gi|212696291|ref|ZP_03304419.1| hypothetical protein ANHYDRO_00828 [Anaerococcus hydrogenalis DSM
7454]
gi|212676920|gb|EEB36527.1| hypothetical protein ANHYDRO_00828 [Anaerococcus hydrogenalis DSM
7454]
Length = 233
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 12/73 (16%)
Query: 53 DFWIRHV-------EDSLRVFQL--HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
+ +++HV DS+ + ID+G+G G + LS V
Sbjct: 11 NLYMKHVDKAYSFGIDSILLANFSKMKKNKTLIDIGAGNGILSLA---CLSYYNLSKVYG 67
Query: 104 IESKNKKASFLRY 116
IE + KKA
Sbjct: 68 IEIQEKKAEIFNE 80
>gi|254303696|ref|ZP_04971054.1| possible methyltransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323888|gb|EDK89138.1| possible methyltransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 517
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 8/77 (10%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ +++G G I +++ E V I+ + + +++ ++
Sbjct: 51 NARVLEIGCSFGGNIIPFALENPKAE---VIGIDLSSVQIEEGNRIIENLGLENIRLIHQ 107
Query: 131 RIQEAPQMITTCDVISA 147
+ + + + D I
Sbjct: 108 NVLDFDEKLGKFDYIIC 124
>gi|186681172|ref|YP_001864368.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
gi|186463624|gb|ACC79425.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
Length = 441
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC- 130
+ +D G G G+ ++ + + +++ E K A + ++ F
Sbjct: 58 EKVILDAGCGTGYKSLVLAEANPGAKIVGIDISEESIKLA---QQRLEHHGFDNAEFHVL 114
Query: 131 RIQEAPQMITTCDVI 145
IQE P++ D I
Sbjct: 115 PIQELPKLNYQFDYI 129
>gi|307287017|ref|ZP_07567092.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0109]
gi|306501963|gb|EFM71252.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX0109]
Length = 415
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 182 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 233
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 234 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 265
>gi|303241042|ref|ZP_07327552.1| putative RNA methylase [Acetivibrio cellulolyticus CD2]
gi|302591467|gb|EFL61205.1| putative RNA methylase [Acetivibrio cellulolyticus CD2]
Length = 251
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITS-------IQLSSIEGGLVNLIESKNKKASFLR 115
L F + IDLG+G G I+ + I I+ + + + K
Sbjct: 37 LANFADVKKGNSVIDLGTGTGIISILLAGKTEAKSIVGLEIQEDIAEMADRSVK------ 90
Query: 116 YVVQKTAARGKVFACRIQEAPQMIT--TCDVISA 147
+ R K+ I+E+ + DV+ +
Sbjct: 91 --MNCLEDRVKIVCGDIKESVGRFGASSFDVVVS 122
>gi|258512138|ref|YP_003185572.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478864|gb|ACV59183.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 276
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 19/129 (14%)
Query: 20 NVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLG 79
+V R +E+ F L+ + E L + L P +DLG
Sbjct: 3 DVVRNNIERFSGFAKLYDTY-------RPEAPETVRE------LLIAYLGKKPDTVVDLG 49
Query: 80 SGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEA-PQM 138
SG G + V +E + + A F + A P
Sbjct: 50 SGTGLSTFPW-----RHDARRVIGVEPNDDMRAQAERRAMDLGADNVTFLPGVSTAIPCS 104
Query: 139 ITTCDVISA 147
+ D+++
Sbjct: 105 DASADLVTC 113
>gi|224824643|ref|ZP_03697750.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Lutiella nitroferrum 2002]
gi|224603136|gb|EEG09312.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Lutiella nitroferrum 2002]
Length = 270
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
H+ + + ++ P+ +DLG G G + +++ + V++ ++ + R
Sbjct: 88 TEHLVE-AALARVGRSPAQVVDLGCGSGAIAVTLALEAPHWQVSAVDVSDA---ALAIAR 143
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ A F D+I +
Sbjct: 144 QNAARLMAPVTFFQGSWYAPLPPAAVFDLIVS 175
>gi|254392466|ref|ZP_05007646.1| RNA methylase [Streptomyces clavuligerus ATCC 27064]
gi|197706133|gb|EDY51945.1| RNA methylase [Streptomyces clavuligerus ATCC 27064]
Length = 197
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
DL +G G G+ ++ + L+E+ + A +R V+ G +V
Sbjct: 42 EGLRIADLYAGSGAVGLE-ALSRGAAHAL---LVEADARAARTVRENVRSLGLPGAEVRT 97
Query: 130 CRIQEA---PQMITTCDVI 145
R ++ P DV+
Sbjct: 98 GRAEQIVSGPAPADPYDVV 116
>gi|145595358|ref|YP_001159655.1| methyltransferase type 11 [Salinispora tropica CNB-440]
gi|145304695|gb|ABP55277.1| Methyltransferase type 11 [Salinispora tropica CNB-440]
Length = 362
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 12/103 (11%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
+L P+ D+ G G+ GI + SI V+ + + R +
Sbjct: 176 RLTAGPARVADVACGAGWAGIGLARSFPSI---TVDGFDIDADVIADARGHAADAGLTDR 232
Query: 127 V-FACRIQEAPQMITTCDVI--------SARALADLDTLLEYS 160
V F P + D++ AR + LDT
Sbjct: 233 VSFVAHDAATPDLAGRYDLVCLFDALHEIARPVEVLDTCRRLC 275
>gi|167038491|ref|YP_001666069.1| HemK family modification methylase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167038766|ref|YP_001661751.1| HemK family modification methylase [Thermoanaerobacter sp. X514]
gi|256751360|ref|ZP_05492239.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913649|ref|ZP_07130966.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter sp. X561]
gi|307723336|ref|YP_003903087.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter sp. X513]
gi|320116887|ref|YP_004187046.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166853006|gb|ABY91415.1| modification methylase, HemK family [Thermoanaerobacter sp. X514]
gi|166857325|gb|ABY95733.1| modification methylase, HemK family [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749742|gb|EEU62767.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus
CCSD1]
gi|300890334|gb|EFK85479.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter sp. X561]
gi|307580397|gb|ADN53796.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter sp. X513]
gi|319929978|gb|ADV80663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 279
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V + + ID+G+G G + V ++ K +Y +K
Sbjct: 103 VLKRLKKGNTLIDIGTGSGAIAVSVVKYFPDC---FVYAVDISRKALEVAKYNAKKHNVL 159
Query: 125 GKVFACRIQEAPQMIT--TCDVISA 147
K+ Q+ D I +
Sbjct: 160 DKIVFIESDVFSQVPKNIKFDFIVS 184
>gi|313772899|gb|EFS38865.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL074PA1]
gi|313811039|gb|EFS48753.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL083PA1]
gi|313831802|gb|EFS69516.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL007PA1]
gi|313834654|gb|EFS72368.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL056PA1]
gi|314974658|gb|EFT18753.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL053PA1]
gi|314977147|gb|EFT21242.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL045PA1]
gi|314985755|gb|EFT29847.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL005PA1]
gi|315097489|gb|EFT69465.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL038PA1]
gi|327331425|gb|EGE73164.1| putative phosphotransferase enzyme [Propionibacterium acnes
HL096PA2]
gi|327447190|gb|EGE93844.1| PTS system protein, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL043PA1]
gi|327449776|gb|EGE96430.1| PTS system protein, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL043PA2]
gi|328761840|gb|EGF75352.1| putative phosphotransferase enzyme [Propionibacterium acnes
HL099PA1]
Length = 97
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTC--DVISA 147
A+ L+ ++++ ++ CR+ E P++ DVI +
Sbjct: 21 ANKLQRLLRERGINARMEHCRVAEVPRVAERFSPDVIVS 59
>gi|310765221|gb|ADP10171.1| Ribosomal RNA small subunit methyltransferase [Erwinia sp. Ejp617]
Length = 384
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 31/147 (21%)
Query: 5 DSNSILRANYLLNTYNVSRETLEKLEYFYFLFLKWSKKINLVSSSTVEDFWIRHVED--S 62
DSNS A+ + Y + L T+ + R D S
Sbjct: 190 DSNSTFDADTFWDEYPLGE---------------------LT-VKTLPGVFSRDGLDIGS 227
Query: 63 -LRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
L + L P +D+G G G + + + + L + + + +
Sbjct: 228 QLLLSTLKPDMKGKVLDMGCGAGVLSAMLASFSPKVR---LTLTDVNAAAIASSKATLAA 284
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
G VFA + + D+I +
Sbjct: 285 NQLEGDVFASNV--YSDISGRFDMIIS 309
>gi|39936576|ref|NP_948852.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris CGA009]
gi|39650432|emb|CAE28955.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
Length = 311
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 12/105 (11%)
Query: 62 SLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
L + L P +DLG+G G + +I + V + + + R
Sbjct: 157 CLTLLDLVLRAGPPQRVLDLGTGTG----VLAIAAAKALRHTVLATDIDKQSVAVARENA 212
Query: 119 QKTAARGKVFA----CRIQEAPQMITTCDVISARALA-DLDTLLE 158
+ V A D++ A LA L TL +
Sbjct: 213 RLNGVGNLVQAEWATGFASPVFAAHAPFDLVLANILANPLRTLAQ 257
>gi|302527036|ref|ZP_07279378.1| predicted protein [Streptomyces sp. AA4]
gi|302435931|gb|EFL07747.1| predicted protein [Streptomyces sp. AA4]
Length = 290
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 7/90 (7%)
Query: 62 SLRVFQL--HPYPSIWIDLGSGGGFPGIITSI-QLSSIEGGLVNLIESKNKKASFLRYVV 118
S + +L +D+G+G G P + + ++L ++A
Sbjct: 41 SALLLELGGVRPGHRVLDVGTGTGDPALAAAAAVGPRGRVTGIDLAPGMIERAR----AR 96
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + + + DV+ +R
Sbjct: 97 AASGGNVAFEVGDAESLDRPAASFDVVLSR 126
>gi|294815345|ref|ZP_06773988.1| Putative RNA methylase [Streptomyces clavuligerus ATCC 27064]
gi|326443699|ref|ZP_08218433.1| putative RNA methylase [Streptomyces clavuligerus ATCC 27064]
gi|294327944|gb|EFG09587.1| Putative RNA methylase [Streptomyces clavuligerus ATCC 27064]
Length = 200
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
DL +G G G+ ++ + L+E+ + A +R V+ G +V
Sbjct: 45 EGLRIADLYAGSGAVGLE-ALSRGAAHAL---LVEADARAARTVRENVRSLGLPGAEVRT 100
Query: 130 CRIQEA---PQMITTCDVI 145
R ++ P DV+
Sbjct: 101 GRAEQIVSGPAPADPYDVV 119
>gi|154149607|ref|YP_001403225.1| methyltransferase type 11 [Candidatus Methanoregula boonei 6A8]
gi|153998159|gb|ABS54582.1| Methyltransferase type 11 [Methanoregula boonei 6A8]
Length = 287
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 19/119 (15%)
Query: 38 KWSKKINLV--SSSTVEDFWIRHV---EDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQ 92
W KK N ++ +V +F R + D L V + +D+G+G G I +
Sbjct: 38 DWDKKENATRYAAQSVGEFETR-IRMTLDDLVV----NSSTRVLDIGAGPGTLAIPLA-- 90
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FACRIQEAPQMI---TTCDVISA 147
+ + +E L K +E D++ A
Sbjct: 91 ---PKVKEITAVEPGAGMIIALEERAGKEGINNITCVRKTWEEVDPTRDIEGPYDLVIA 146
>gi|21228735|ref|NP_634657.1| hypothetical protein MM_2633 [Methanosarcina mazei Go1]
gi|20907246|gb|AAM32329.1| hypothetical protein MM_2633 [Methanosarcina mazei Go1]
Length = 225
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 7/87 (8%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
S+ + + +DLG+G G + LV++ E L +
Sbjct: 33 SVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKM------LEIAKNRF 86
Query: 122 AARGKVFACRIQEAP-QMITTCDVISA 147
KV + D++ +
Sbjct: 87 RGNLKVKYIEADYSKYDFEEKYDMVVS 113
>gi|304321560|ref|YP_003855203.1| modification methylase, HemK family protein [Parvularcula
bermudensis HTCC2503]
gi|303300462|gb|ADM10061.1| modification methylase, HemK family protein [Parvularcula
bermudensis HTCC2503]
Length = 318
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 29/84 (34%), Gaps = 3/84 (3%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P+ +DLG+G G + + G ++L + + R ++
Sbjct: 144 AALRPLPHGGRLLDLGTGSGCIAVTILAERPDSRGEAIDL---SAEALAVARINARRHGV 200
Query: 124 RGKVFACRIQEAPQMITTCDVISA 147
G++ + D+I +
Sbjct: 201 EGRLGLAPVPFEAAPSGPFDLILS 224
>gi|319792469|ref|YP_004154109.1| methyltransferase regulatory domain, predicted [Variovorax
paradoxus EPS]
gi|315594932|gb|ADU35998.1| Methyltransferase regulatory domain, predicted [Variovorax
paradoxus EPS]
Length = 531
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P + ++LG G I + + V+L S + + + + + + ++ A
Sbjct: 45 PATARVLELGCAAGGNLIPFAARHPEASALGVDL--SPVQVSQGVAAIAHASLSNVELRA 102
Query: 130 CRIQEAPQMITTCDVISA 147
I + D I
Sbjct: 103 FNIADIDASFGQFDYIVC 120
>gi|291603742|gb|ADE20138.1| phosphatidylethanolamine N-methyltransferase [Fluoribacter
bozemanae]
Length = 194
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
+ +++G G G + + ++ +++ E +KA + V K R ++
Sbjct: 33 KQNATVLEIGIGTG---LSLPLYRGDLQITGIDISEKMLEKAEE-QVVKNKLEERVQLKV 88
Query: 130 CRIQEAPQMITTCDVISA 147
+ D I A
Sbjct: 89 MDAAHLEFPDNSFDFIVA 106
>gi|288960113|ref|YP_003450453.1| methyltransferase [Azospirillum sp. B510]
gi|288912421|dbj|BAI73909.1| methyltransferase [Azospirillum sp. B510]
Length = 256
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L +D+G+G G + ++++ G V +E + +F R T
Sbjct: 43 LAAITAASAGERVLDVGTGTGAAALCLAVRVP---GVAVVGLEQRADACAFARRNAALTG 99
Query: 123 A--RGKVFACRIQEAPQMI--TTCDVI 145
R V + P+ + D +
Sbjct: 100 VAERVTVVEGDLLAPPETVGGGGFDRV 126
>gi|189189266|ref|XP_001930972.1| SAM-dependent methyltransferases [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972578|gb|EDU40077.1| SAM-dependent methyltransferases [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 351
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+DLG G G + + + + + S+ +K ++ V Q + ++
Sbjct: 125 LKDGMSILDLGCGWGSASLYFAEVFPNSKITGFS--NSRTQK-EYIDSVAQAKGFKNLQI 181
Query: 128 FACRIQEAPQMITTCDVISA 147
+ E + D + +
Sbjct: 182 ITGDVVEYEFEPSQYDRVVS 201
>gi|170720621|ref|YP_001748309.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Pseudomonas putida W619]
gi|169758624|gb|ACA71940.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Pseudomonas putida W619]
Length = 302
Score = 33.5 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 67 QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK 126
L P+ +DL +G G GI+ + E V L + + +++ +
Sbjct: 121 WLANEPARILDLCTGSGCIGIVAAEVFPEAE---VVLADLSFEALEVANQNIERHGLDER 177
Query: 127 VFACRIQEAPQMITT-CDVISA 147
V+ + + D+I +
Sbjct: 178 VYTVQGDGFAGLPGQRFDLILS 199
>gi|313893371|ref|ZP_07826943.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 158
str. F0412]
gi|313442012|gb|EFR60432.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 158
str. F0412]
Length = 877
Score = 33.5 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADL 153
++ + ++ +K+K + + Q+ K+ +QE +ARALA+L
Sbjct: 506 PELKEFEIKILSAKDKIIALEHELYQQLRNDIKLVIKDVQE-----------TARALAEL 554
Query: 154 DTLLEYSF 161
D L +
Sbjct: 555 DVLCSLAL 562
>gi|312873656|ref|ZP_07733703.1| methyltransferase small domain protein [Lactobacillus iners LEAF
2052A-d]
gi|325911620|ref|ZP_08174028.1| methyltransferase small domain protein [Lactobacillus iners UPII
143-D]
gi|311090909|gb|EFQ49306.1| methyltransferase small domain protein [Lactobacillus iners LEAF
2052A-d]
gi|325476606|gb|EGC79764.1| methyltransferase small domain protein [Lactobacillus iners UPII
143-D]
Length = 204
Score = 33.5 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 LKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F+ +I
Sbjct: 111 ---DNVNIFSSDCYRNLDDQEQFGLI 133
>gi|310792630|gb|EFQ28157.1| methyltransferase domain-containing protein [Glomerella graminicola
M1.001]
Length = 339
Score = 33.5 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 8/80 (10%), Positives = 22/80 (27%), Gaps = 4/80 (5%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KV 127
+DLG G G + + + + K ++ ++ V
Sbjct: 112 LKDGMSILDLGCGWGSCAMYFAEVFPHSKVTAFS-NSKTQK--EYIDAKAEEKGLTNLTV 168
Query: 128 FACRIQEAPQMITTCDVISA 147
+ + + D + +
Sbjct: 169 ITGNVVDYEFDQESFDRVVS 188
>gi|309810081|ref|ZP_07703927.1| methyltransferase small domain protein [Lactobacillus iners SPIN
2503V10-D]
gi|308169580|gb|EFO71627.1| methyltransferase small domain protein [Lactobacillus iners SPIN
2503V10-D]
Length = 204
Score = 33.5 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L+V + +D+G+G G G+ + ++++ E + K+ + L +
Sbjct: 53 LKVLKQLEISGNILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-- 110
Query: 120 KTAARGKVFACRIQEAPQMITTCDVI 145
+F+ +I
Sbjct: 111 ---DNVNIFSSDCYRNLDDQEQFGLI 133
>gi|254297090|ref|ZP_04964543.1| ATP-dependent helicase HepA [Burkholderia pseudomallei 406e]
gi|157807896|gb|EDO85066.1| ATP-dependent helicase HepA [Burkholderia pseudomallei 406e]
Length = 931
Score = 33.5 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 102 NLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISARALADLDTLLEYSF 161
NL+E+ ++ L + A + R++EA +V RAL +D + Y
Sbjct: 869 NLLEALQQRQEQLERLADVQAEQLLADHRRVREAADARGRYEV---RALKPVDVIAAYVL 925
>gi|84685294|ref|ZP_01013192.1| Cyclopropane-fatty-acyl-phospholipid synthase [Maritimibacter
alkaliphilus HTCC2654]
gi|84666451|gb|EAQ12923.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacterales
bacterium HTCC2654]
Length = 411
Score = 33.5 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 9/98 (9%)
Query: 50 TVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNK 109
++ H+ LR+ +D+G G G G+ ++ +V + SK +
Sbjct: 154 EAQEAKKHHIAHKLRIEP----GMKVLDIGCGWG--GMALTLAR-DYGAHVVGVTLSKEQ 206
Query: 110 KASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
A ++ Q ++ R+Q+ + + D I +
Sbjct: 207 HAIAVKRA-QDAGLSDRI-DIRLQDYRDVTESFDRIVS 242
>gi|296876521|ref|ZP_06900572.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Streptococcus parasanguinis ATCC 15912]
gi|296432514|gb|EFH18310.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Streptococcus parasanguinis ATCC 15912]
Length = 276
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G+G G I ++ + + V + + + + ++
Sbjct: 101 LILEENDEKALRVLDIGTGSGAIAISLALAKPTWQ---VQASDVSEEALALAQKNAKQLE 157
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
A + + + Q+ D+I +
Sbjct: 158 AFLEFKSSDV--LEQLAGPYDLIVS 180
>gi|126436584|ref|YP_001072275.1| O-methyltransferase family protein [Mycobacterium sp. JLS]
gi|126236384|gb|ABN99784.1| O-methyltransferase, family 3 [Mycobacterium sp. JLS]
Length = 239
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +++G+G G G+ + +E ++++ + ++
Sbjct: 74 LSVLARLTEAKAVVEVGTGAGVSGLWLLSGMREDGVLTTIDVEPEHQRIAKQAFIEAGIG 133
Query: 123 -ARGKVFACRIQEAPQM--ITTCDVI 145
+R ++ + R QE + D++
Sbjct: 134 PSRTRLISGRAQEVLTRLADESYDLV 159
>gi|194366088|ref|YP_002028698.1| type 11 methyltransferase [Stenotrophomonas maltophilia R551-3]
gi|194348892|gb|ACF52015.1| Methyltransferase type 11 [Stenotrophomonas maltophilia R551-3]
Length = 275
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 14/102 (13%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +L + +D+G G G + + + G +++ + R +
Sbjct: 38 LLVAELPESVTHLLDIGCGTGASLLAAAAARPAAHGTGLDISAPM---LALARQRAETAG 94
Query: 123 ARGKVFACRIQEAPQMITTCDVISAR-----------ALADL 153
Q P D I +R A A+L
Sbjct: 95 LDADFIVADAQRHPLPSAHFDWIQSRLGVMFFEDSQAAFANL 136
>gi|152997600|ref|YP_001342435.1| HemK family modification methylase [Marinomonas sp. MWYL1]
gi|150838524|gb|ABR72500.1| modification methylase, HemK family [Marinomonas sp. MWYL1]
Length = 282
Score = 33.5 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE---SKNKKASFLRYVVQ 119
L V + +DLG+G G + + + V+L+E + K+ ++
Sbjct: 104 LSVLDISKVN-RILDLGTGTGAIALSLASEQPKSTVMGVDLVEDAVALAKR-----NALR 157
Query: 120 KTAARGKVFACRIQEAPQMITTCDVISA 147
+ +A + D+I +
Sbjct: 158 NKLSNVDFLQSSWFDALEGCEPFDLIVS 185
>gi|289423828|ref|ZP_06425622.1| methlytransferase, UbiE/COQ5 family [Peptostreptococcus anaerobius
653-L]
gi|289155765|gb|EFD04436.1| methlytransferase, UbiE/COQ5 family [Peptostreptococcus anaerobius
653-L]
Length = 246
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV--F 128
+ +D+G G GF ++ + G V I++ + ++ K+
Sbjct: 42 QKNKILDVGCGTGFISLLLAQI-----GCDVIAIDNNVAMLKEAEKISEELGFSNKITFM 96
Query: 129 ACRIQEAPQMITTCDVISAR-AL 150
+ T + + +R A
Sbjct: 97 LKDTELVDFPDNTFNAVVSRHAF 119
>gi|225848045|ref|YP_002728208.1| S-adenosylmethionine-dependent methyltransferase
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643992|gb|ACN99042.1| S-adenosylmethionine-dependent methyltransferase
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 203
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 13/99 (13%)
Query: 49 STVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN 108
+V + +H+ +D G G G + L G V + S+
Sbjct: 22 KSVAENIKKHI--------PLNKDMKLLDFGCGTGL----LTFFLIDKVGRAVGVDSSQG 69
Query: 109 KKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
FL+ + +V +++ + DVI +
Sbjct: 70 MCEVFLKKAKENNIDNVEVLNVDLEKQ-DIDQKFDVIVS 107
>gi|254442537|ref|ZP_05056013.1| hypothetical protein VDG1235_770 [Verrucomicrobiae bacterium
DG1235]
gi|198256845|gb|EDY81153.1| hypothetical protein VDG1235_770 [Verrucomicrobiae bacterium
DG1235]
Length = 332
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK-- 120
+ + ID+G+G G ++ + V ++ A R V+K
Sbjct: 50 AAIKEALAGGETVIDVGTGSGL----LAMLAAKAGAKRVYALDQST-VAEAARETVEKNG 104
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
+V + Q+ D+I +
Sbjct: 105 MGDVVEVLNANAVDF-QVAEPVDLIVS 130
>gi|332088462|gb|EGI93580.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Shigella boydii 5216-82]
Length = 310
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ P +D+ +G G I+ + E V+ ++ + +++ V
Sbjct: 129 ISKQPQHILDMCTGSGCIAIVCAYVFPDAE---VDAVDISPDALAVAEQNIEEHGLIHNV 185
Query: 128 FACRIQEAPQMIT-TCDVIS 146
R + D+I
Sbjct: 186 IPIRSDLFRDLPKVQYDLIV 205
>gi|325271646|ref|ZP_08138147.1| type 11 methyltransferase [Pseudomonas sp. TJI-51]
gi|324103218|gb|EGC00564.1| type 11 methyltransferase [Pseudomonas sp. TJI-51]
Length = 254
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + +DLG G G + ++ V + + +
Sbjct: 36 LQAELAGQGAARVLDLGCGAGHVSFHVAPLVAE-----VVAYDLSQAMLDVVASAAAERG 90
Query: 123 ARGKV-FACRIQEAPQMITTCDVISAR 148
+ + P + D + +R
Sbjct: 91 LGNIITERGAAERLPFADASFDFVFSR 117
>gi|323439811|gb|EGA97528.1| methyltransferase small subunit [Staphylococcus aureus O11]
Length = 202
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 7/74 (9%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
D+G G G G++ + + +++ ++ + ++ + +
Sbjct: 61 SKRIADVGCGYGPIGLMIAKVSPH---HSITMLDVNHRALALVKKNQKLNGIDNVIVKES 117
Query: 132 IQEAPQMITTCDVI 145
+ + D I
Sbjct: 118 DALSAVEDKSFDFI 131
>gi|293364551|ref|ZP_06611274.1| S-adenosylmethionine-dependent methyltransferase [Streptococcus
oralis ATCC 35037]
gi|307702549|ref|ZP_07639502.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
gi|315611934|ref|ZP_07886852.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
gi|291316963|gb|EFE57393.1| S-adenosylmethionine-dependent methyltransferase [Streptococcus
oralis ATCC 35037]
gi|307623895|gb|EFO02879.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
gi|315315923|gb|EFU63957.1| conserved hypothetical protein [Streptococcus sanguinis ATCC 49296]
Length = 195
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D G G G + + + V L++ K R ++ + F +
Sbjct: 37 DKEILDFGGGTGLLALPLA-----KQAKSVTLVDISEKMLEQARLKAEQQDIKNIQFLEQ 91
Query: 132 IQEAPQMITTCD-VISARALADLDTL 156
A + D ++ +R L + L
Sbjct: 92 NLLANPLEQQFDLIVVSRVLHHMPDL 117
>gi|300773368|ref|ZP_07083237.1| UbiE/COQ5 family methyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300759539|gb|EFK56366.1| UbiE/COQ5 family methyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 237
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 75 WIDLGSGGG-FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G G G +P + S + LV+L + KA + + T+ R Q
Sbjct: 55 VLDVGCGAGNYPVKLLSKVR-NPNITLVDLSQPMLDKA--VERIQPLTSGRVDAIKADFQ 111
Query: 134 EAPQMITTCDVISARAL 150
+ DVI A A+
Sbjct: 112 TLEFPAGSFDVIVATAV 128
>gi|152986240|ref|YP_001348482.1| hypothetical protein PSPA7_3123 [Pseudomonas aeruginosa PA7]
gi|150961398|gb|ABR83423.1| hypothetical protein PSPA7_3123 [Pseudomonas aeruginosa PA7]
Length = 318
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 21/75 (28%), Gaps = 4/75 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
D+G G G I ++ E V+ ++ R A R
Sbjct: 138 RRAADIGCGAGPGAIRIALACPDAE---VHGLDINPAALDLARVNAALAGVDNLTLA-RS 193
Query: 133 QEAPQMITTCDVISA 147
Q D+I A
Sbjct: 194 DLLCQAPGRFDLIVA 208
>gi|21227877|ref|NP_633799.1| methyltransferase [Methanosarcina mazei Go1]
gi|20906292|gb|AAM31471.1| methyltransferase [Methanosarcina mazei Go1]
Length = 336
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
+ +D+ +G G I+ + S + V I+ + +L + +A+
Sbjct: 177 ILSWIKEGDTVVDMFAGVGPYSILLA---KSKKPSRVVAIDKNPEAVRYLNENISLNSAK 233
Query: 125 G--KVFACRIQEAPQMITTCDVIS 146
+ +EA + T D +
Sbjct: 234 NIEAIEGDAREEAKRFAGTADHVI 257
>gi|51596332|ref|YP_070523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pseudotuberculosis IP 32953]
gi|170024409|ref|YP_001720914.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pseudotuberculosis YPIII]
gi|186895375|ref|YP_001872487.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pseudotuberculosis PB1/+]
gi|51589614|emb|CAH21244.1| putative protoporphyrinogen oxidase [Yersinia pseudotuberculosis IP
32953]
gi|169750943|gb|ACA68461.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Yersinia pseudotuberculosis YPIII]
gi|186698401|gb|ACC89030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Yersinia pseudotuberculosis PB1/+]
Length = 276
Score = 33.5 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L P +DLG+G G + + S V ++ + R+ +K A
Sbjct: 102 ALARLPSMPCRILDLGTGTGAIALALA---SERRDCAVIAVDINADAVALARHNAKKLAI 158
Query: 124 RGKVF 128
F
Sbjct: 159 DNVCF 163
>gi|315165904|gb|EFU09921.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis TX1302]
Length = 437
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 204 VHHILDKL----FIKEGDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 255
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 256 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 287
>gi|294782569|ref|ZP_06747895.1| methyltransferase [Fusobacterium sp. 1_1_41FAA]
gi|294481210|gb|EFG28985.1| methyltransferase [Fusobacterium sp. 1_1_41FAA]
Length = 382
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 62 SLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT 121
+++ + P+ +D+GSG G I + + ++ V ++
Sbjct: 187 CIQLMREIEEPN-ILDIGSGSGAISIAIA---NELKSSSVTGVDINEDAIELANENKVLN 242
Query: 122 AARGKVF-ACRIQEAPQMITTCDVISA 147
F + E D+I +
Sbjct: 243 KVENVNFMKSDLFEKLDEDFKYDLIVS 269
>gi|289424195|ref|ZP_06425978.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes SK187]
gi|289428855|ref|ZP_06430535.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes J165]
gi|289154892|gb|EFD03574.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes SK187]
gi|289157856|gb|EFD06079.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes J165]
gi|313793080|gb|EFS41147.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL110PA1]
gi|313802473|gb|EFS43695.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL110PA2]
gi|313806487|gb|EFS44994.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL087PA2]
gi|313814460|gb|EFS52174.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL025PA1]
gi|313817356|gb|EFS55070.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL046PA2]
gi|313821899|gb|EFS59613.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL036PA1]
gi|313824205|gb|EFS61919.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL036PA2]
gi|313826573|gb|EFS64287.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL063PA1]
gi|313828757|gb|EFS66471.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL063PA2]
gi|313840115|gb|EFS77829.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL086PA1]
gi|314926713|gb|EFS90544.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL036PA3]
gi|314961080|gb|EFT05181.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL002PA2]
gi|314964492|gb|EFT08592.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL082PA1]
gi|314969592|gb|EFT13690.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL037PA1]
gi|314980437|gb|EFT24531.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL072PA2]
gi|314987278|gb|EFT31369.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL005PA2]
gi|314989178|gb|EFT33269.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL005PA3]
gi|315078493|gb|EFT50524.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL053PA2]
gi|315082044|gb|EFT54020.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL078PA1]
gi|315082816|gb|EFT54792.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL027PA2]
gi|315086172|gb|EFT58148.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL002PA3]
gi|315087756|gb|EFT59732.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL072PA1]
gi|315110297|gb|EFT82273.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL030PA2]
gi|327333412|gb|EGE75132.1| putative phosphotransferase enzyme [Propionibacterium acnes
HL096PA3]
gi|327334935|gb|EGE76646.1| putative phosphotransferase enzyme [Propionibacterium acnes
HL097PA1]
gi|327445570|gb|EGE92224.1| PTS system protein, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL013PA2]
gi|327457027|gb|EGF03682.1| PTS system protein, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL092PA1]
gi|328758810|gb|EGF72426.1| PTS system protein, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes HL020PA1]
gi|332674758|gb|AEE71574.1| putative phosphotransferase enzyme [Propionibacterium acnes 266]
Length = 97
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTC--DVISA 147
A+ L+ ++++ ++ CR+ E P++ DVI +
Sbjct: 21 ANKLQRLLRERGINARMEHCRVAEVPRVAERFSPDVIVS 59
>gi|295129918|ref|YP_003580581.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes SK137]
gi|291375351|gb|ADD99205.1| PTS system, Lactose/Cellobiose specific IIB subunit
[Propionibacterium acnes SK137]
Length = 97
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 111 ASFLRYVVQKTAARGKVFACRIQEAPQMITTC--DVISA 147
A+ L+ ++++ ++ CR+ E P++ DVI +
Sbjct: 21 ANKLQRLLRERGINARMEHCRVAEVPRVAERFSPDVIVS 59
>gi|154148799|ref|YP_001405719.1| putative methyl transferase [Campylobacter hominis ATCC BAA-381]
gi|153804808|gb|ABS51815.1| putative methyl transferase [Campylobacter hominis ATCC BAA-381]
Length = 205
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 40/105 (38%), Gaps = 6/105 (5%)
Query: 47 SSSTVEDFWIRHVEDSLRVF---QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T++ H SL + + +D+G GGG + + + + + ++
Sbjct: 16 GILTLQRMNKMHNIGSLWAIDKIKTNNENIKILDVGCGGGQNLLNFAEKFPNAKLFGIDY 75
Query: 104 IESKNKKASF-LRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ K + + ++ + + ++ C I + D++SA
Sbjct: 76 SPTSIKFCAKNCKNLIGENRLKLEL--CDIHKTNFKEREFDIVSA 118
>gi|153948102|ref|YP_001401038.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pseudotuberculosis IP 31758]
gi|152959597|gb|ABS47058.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP
31758]
Length = 276
Score = 33.5 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ +L P +DLG+G G + + S V ++ + R+ +K A
Sbjct: 102 ALARLPSMPCRILDLGTGTGAIALALA---SERRDCAVIAVDINADAVALARHNAKKLAI 158
Query: 124 RGKVF 128
F
Sbjct: 159 DNVCF 163
>gi|124515208|gb|EAY56719.1| Modification methylase (HemK) [Leptospirillum rubarum]
Length = 293
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 27/93 (29%), Gaps = 16/93 (17%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE----GGLVNLIESKNKKASFL 114
+ DS P +DLG G G GI + V +E K
Sbjct: 117 ILDS-------RSPERILDLGCGSGILGISLLKKFPKAHCLAVDRSVVPLEVSRK----- 164
Query: 115 RYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ +R E ++ D+I +
Sbjct: 165 NALALGVLSRIHFVQGDWTEMLRLDQGFDLIVS 197
>gi|159900745|ref|YP_001546992.1| type 11 methyltransferase [Herpetosiphon aurantiacus ATCC 23779]
gi|159893784|gb|ABX06864.1| Methyltransferase type 11 [Herpetosiphon aurantiacus ATCC 23779]
Length = 234
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 6/91 (6%)
Query: 60 EDSLRVFQLHPYPS--IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
D L + Q P + D+G G G I + E ++L + KA R
Sbjct: 23 VDVLHLLQNQPIAAKPRIFDVGCGQGQVAIAMAQAWPDAEIIAIDLSPEQIVKA---RQA 79
Query: 118 VQKTAARGKVF-ACRIQEAPQMITTCDVISA 147
+ F A +E + D+I A
Sbjct: 80 AAQAGINTIQFGAADWREFELPRSGVDIIVA 110
>gi|114321403|ref|YP_743086.1| cyclopropane-fatty-acyl-phospholipid synthase [Alkalilimnicola
ehrlichii MLHE-1]
gi|114227797|gb|ABI57596.1| cyclopropane-fatty-acyl-phospholipid synthase [Alkalilimnicola
ehrlichii MLHE-1]
Length = 417
Score = 33.5 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ P +++G G G G + + + V L + ++ R ++K
Sbjct: 181 LQTLAARP-GEHVLEIGCGWG--GFAEAAARAGLRVTGVTL---SPNQLAWARERIRKAG 234
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+V R+Q+ + D + +
Sbjct: 235 LEDRVV-LRLQDYRALSGQYDHVVS 258
>gi|315608028|ref|ZP_07883021.1| ribosomal protein L11 methyltransferase [Prevotella buccae ATCC
33574]
gi|315250497|gb|EFU30493.1| ribosomal protein L11 methyltransferase [Prevotella buccae ATCC
33574]
Length = 288
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 5/85 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D G G G I I + + V + R+ +
Sbjct: 145 TLLNMDLDGKRILDCGCGTG----ILGIAAAKMGAREVVGYDIDEWSVENTRHNAELNHV 200
Query: 124 RG-KVFACRIQEAPQMITTCDVISA 147
+V+ + DV+ A
Sbjct: 201 ENFEVYHGDAHVLNHVNGLFDVVLA 225
>gi|288905237|ref|YP_003430459.1| methyltransferase [Streptococcus gallolyticus UCN34]
gi|306831308|ref|ZP_07464468.1| protein-(glutamine-N5) methyltransferase [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325978213|ref|YP_004287929.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
gi|288731963|emb|CBI13528.1| putative methyltransferase [Streptococcus gallolyticus UCN34]
gi|304426544|gb|EFM29656.1| protein-(glutamine-N5) methyltransferase [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325178141|emb|CBZ48185.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
Length = 276
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL-IESKN-KKASFLRYVVQK 120
L + + +D+G+G G I + + ++ ++ K + L+ V+
Sbjct: 101 LVLKENSRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQLAKENALKNQVEL 160
Query: 121 TAARGKVFACRIQEAPQMITTCDVISA 147
T + VF+ Q+ D+I +
Sbjct: 161 TLIQSDVFS-------QITERFDMIIS 180
>gi|302550467|ref|ZP_07302809.1| phosphonate C-P lyase system protein PhnK [Streptomyces
viridochromogenes DSM 40736]
gi|302468085|gb|EFL31178.1| phosphonate C-P lyase system protein PhnK [Streptomyces
viridochromogenes DSM 40736]
Length = 265
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 30/94 (31%), Gaps = 11/94 (11%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
L+P LG G PG I + + E K+ + L V+
Sbjct: 54 LYPSSGTTAILGETLGKPGTDVFELRPRIGMAGIAMTEKLPKRQTVLETVLTAAYGMTAT 113
Query: 128 FACRIQEAPQMITTCDVISARALADLDTL--LEY 159
+ +E + ARA LD L EY
Sbjct: 114 WHEDYEEIDEQR-------ARAF--LDRLGMSEY 138
>gi|228937403|ref|ZP_04100049.1| hypothetical protein bthur0008_880 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970289|ref|ZP_04130948.1| hypothetical protein bthur0003_870 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976859|ref|ZP_04137271.1| hypothetical protein bthur0002_870 [Bacillus thuringiensis Bt407]
gi|228782829|gb|EEM30995.1| hypothetical protein bthur0002_870 [Bacillus thuringiensis Bt407]
gi|228789398|gb|EEM37318.1| hypothetical protein bthur0003_870 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822236|gb|EEM68218.1| hypothetical protein bthur0008_880 [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 213
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGDILDVGCGYGPIGLSLA---KEFQGCEVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A ++ RI ++ + I + RA
Sbjct: 117 ANNRIENIRIFQSSVYENVDGEYAAILSNPPIRA 150
>gi|318061095|ref|ZP_07979816.1| Methyltransferase type 12 [Streptomyces sp. SA3_actG]
Length = 322
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Query: 53 DFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
+ H+ SL L P +DLGSG G + V+ ++
Sbjct: 74 EVLASHIA-SLTDWLPLTAAPRHIVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQR- 131
Query: 112 SFLRYVVQKTAARGKVFACRI 132
LR G+V
Sbjct: 132 --LREKACAAGLDGRVRTVHA 150
>gi|256847108|ref|ZP_05552554.1| ribosomal protein L11 methyltransferase [Lactobacillus coleohominis
101-4-CHN]
gi|256715772|gb|EEU30747.1| ribosomal protein L11 methyltransferase [Lactobacillus coleohominis
101-4-CHN]
Length = 319
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 22/102 (21%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKN------KKASFLRYVVQKTAAR 124
ID+G+G G + +I + G V + K+ L
Sbjct: 178 GGESVIDVGTGSG----VLAIAAKLLGAGNVTAYDVDEVAVESAKRNVALNQQAADIQLG 233
Query: 125 GKVFACRIQEAPQMITTCDVISARALADLDTLLEYSFPWLYQ 166
I+ T DVI A + L E P + Q
Sbjct: 234 VNSLLDGIE------TQTDVIVA------NILAEIILPLIPQ 263
>gi|254803978|sp|A3Q3Q7|Y4009_MYCSJ RecName: Full=Putative O-methyltransferase Mjls_4009
Length = 220
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +++G+G G G+ + +E ++++ + ++
Sbjct: 55 LSVLARLTEAKAVVEVGTGAGVSGLWLLSGMREDGVLTTIDVEPEHQRIAKQAFIEAGIG 114
Query: 123 -ARGKVFACRIQEAPQM--ITTCDVI 145
+R ++ + R QE + D++
Sbjct: 115 PSRTRLISGRAQEVLTRLADESYDLV 140
>gi|224049501|ref|XP_002194006.1| PREDICTED: similar to glutathione S-transferase, C-terminal domain
containing [Taeniopygia guttata]
Length = 667
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
V +L + +D SGGG GI+ + + S + V LIE+K + +
Sbjct: 467 AAVTKLAKSGDLIVDFCSGGGHVGIVLAYMMPSCQ---VILIENKELSLIRAKDRSDELG 523
Query: 123 ARG 125
Sbjct: 524 LNN 526
>gi|192292397|ref|YP_001993002.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris TIE-1]
gi|192286146|gb|ACF02527.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 296
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 12/105 (11%)
Query: 62 SLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
L + L P +DLG+G G + +I + V + + + R
Sbjct: 142 CLTLLDLVLRAGPPQRVLDLGTGTG----VLAIAAAKALRHTVLATDIDKQSVAVARENA 197
Query: 119 QKTAARGKVFA----CRIQEAPQMITTCDVISARALA-DLDTLLE 158
+ V A D++ A LA L TL +
Sbjct: 198 RLNGVGNLVQAEWATGFASPVFAAHAPFDLVLANILANPLRTLAQ 242
>gi|161612878|ref|YP_001586844.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|161362242|gb|ABX66010.1| hypothetical protein SPAB_00584 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 310
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + H + P +D+ +G G I + E V+ +
Sbjct: 111 LVPRSPIGELINNHFAGLIS-----QQPKYILDMCTGSGCIAIACAYAFPDAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +++ V R + D+I
Sbjct: 163 DISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIV 205
>gi|22125479|ref|NP_668902.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pestis KIM 10]
gi|45442202|ref|NP_993741.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pestis biovar Microtus str. 91001]
gi|21958373|gb|AAM85153.1|AE013761_6 putative adenine-specific methylase [Yersinia pestis KIM 10]
gi|45437066|gb|AAS62618.1| Predicted rRNA or tRNA methylase [Yersinia pestis biovar Microtus
str. 91001]
Length = 333
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+H P+ +D+ +G G I + E V+ ++ N + + +Q+ +V
Sbjct: 152 IHHQPNHILDMCTGSGCIAIACAYAFPDAE---VDAVDISNDVLAVTEHNIQQHGMEHQV 208
Query: 128 FACRIQEAPQMIT-TCDVIS 146
R + D+I
Sbjct: 209 TPIRSDLFRDLPPIKYDLIV 228
>gi|16761309|ref|NP_456926.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|16765712|ref|NP_461327.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|29140995|ref|NP_804337.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|207857803|ref|YP_002244454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|213160946|ref|ZP_03346656.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213426187|ref|ZP_03358937.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213582768|ref|ZP_03364594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
gi|213616434|ref|ZP_03372260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213650420|ref|ZP_03380473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213857263|ref|ZP_03384234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|224583126|ref|YP_002636924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|289826755|ref|ZP_06545700.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|61250532|sp|P0A293|YFCB_SALTY RecName: Full=Uncharacterized adenine-specific methylase yfcB
gi|61250534|sp|P0A294|YFCB_SALTI RecName: Full=Uncharacterized adenine-specific methylase yfcB
gi|25512989|pir||AG0804 conserved hypothetical protein STY2617 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16420929|gb|AAL21286.1| putative methylase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16503608|emb|CAD07617.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136620|gb|AAO68186.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|206709606|emb|CAR33951.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467653|gb|ACN45483.1| hypothetical protein SPC_1320 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247591|emb|CBG25418.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994488|gb|ACY89373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301158943|emb|CBW18456.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913376|dbj|BAJ37350.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|320086818|emb|CBY96590.1| putative adenine-specific methylase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321222913|gb|EFX47984.1| Ribosomal protein L3 methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130718|gb|ADX18148.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
gi|326624209|gb|EGE30554.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Dublin str.
3246]
gi|332989318|gb|AEF08301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 310
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + H + P +D+ +G G I + E V+ +
Sbjct: 111 LVPRSPIGELINNHFAGLIS-----QQPKYILDMCTGSGCIAIACAYAFPDAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +++ V R + D+I
Sbjct: 163 DISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIV 205
>gi|114319781|ref|YP_741464.1| Fmu (Sun) domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226175|gb|ABI55974.1| Fmu (Sun) domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 474
Score = 33.5 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ P +DL + G ++ L + G V + + + +R+++++
Sbjct: 99 TLLDPQP-GHRVLDLCAAPGNKTAQAALALGN--RGTVVANDVAKGRLAAIRHLIKRLGL 155
Query: 124 RGKVFACR-IQEAPQMITTCDVISA 147
CR Q+ D + A
Sbjct: 156 MNVSVTCRPAQDYSPHAGGFDRVIA 180
>gi|328953912|ref|YP_004371246.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Desulfobacca acetoxidans DSM 11109]
gi|328454236|gb|AEB10065.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
subunit [Desulfobacca acetoxidans DSM 11109]
Length = 414
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L +L+P +W D+G+G G G+ S+ I G + +E K+A+ + +K
Sbjct: 250 LAKLELYPGQVLW-DIGAGTGSVGLEASLL---IGRGRIVAVEKNPKRAAQITANREKLQ 305
Query: 123 ARG-KVFACRI 132
+V R
Sbjct: 306 VDNFEVICGRA 316
>gi|326937895|gb|AEA13791.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 199
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 50 IEAFQMPDIKGDILDVGCGYGPIGLSLA---KEFQGCEVHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A ++ RI ++ + I + RA
Sbjct: 103 ANNRIENIRIFQSSVYENVDGEYAAILSNPPIRA 136
>gi|308187584|ref|YP_003931715.1| 3-demethylubiquinone-9 3-methyltransferase and 2-
octaprenyl-6-hydroxy phenol methylase [Pantoea vagans
C9-1]
gi|308058094|gb|ADO10266.1| 3-demethylubiquinone-9 3-methyltransferase and 2-
octaprenyl-6-hydroxy phenol methylase [Pantoea vagans
C9-1]
Length = 241
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 6/78 (7%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D+G GGG + EG +V ++ + + R ++
Sbjct: 56 FGKTVLDVGCGGGILAESMA-----REGAVVTGLDMGAEPLAVARLHALESGVTLDYVQQ 110
Query: 131 RIQE-APQMITTCDVISA 147
++E A Q DV++
Sbjct: 111 TVEEHAEQHAGKYDVVTC 128
>gi|307294684|ref|ZP_07574526.1| ubiquinone biosynthesis O-methyltransferase [Sphingobium
chlorophenolicum L-1]
gi|306879158|gb|EFN10376.1| ubiquinone biosynthesis O-methyltransferase [Sphingobium
chlorophenolicum L-1]
Length = 245
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 36/112 (32%), Gaps = 20/112 (17%)
Query: 42 KINLVSSSTVEDFWIRHVEDSLRVFQLHPY------PSIWIDLGSGGGFPGIITSIQLSS 95
K+N V + D RH + H +D+G G G +
Sbjct: 36 KLNPVRLRYIRDALDRH-------WPGHDQSFRPLAGRRALDVGCGAGLLAEPLARM--- 85
Query: 96 IEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
G + +++ + + R + A +++ + D++++
Sbjct: 86 --GAALTALDAAEENIAVARSHAEAQGLTIDYRATPVEQLED--SGFDLVTS 133
>gi|282865472|ref|ZP_06274523.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Streptomyces sp. ACTE]
gi|282559516|gb|EFB65067.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase
[Streptomyces sp. ACTE]
Length = 389
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 8/102 (7%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
SS+++ R + D L V S +++G+G G+ + + G V +E
Sbjct: 97 TSSASMPSVVFR-MLDVLTV----DEDSRVLEIGTGTGWNAALLA---HRTGDGHVVSVE 148
Query: 106 SKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
A R + + A +V D + A
Sbjct: 149 VDAAVADRAREALHRFGALVEVVHGDGLCGAPDHAPFDRVVA 190
>gi|256960671|ref|ZP_05564842.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis Merz96]
gi|256951167|gb|EEU67799.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis Merz96]
Length = 401
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 168 VHHILDKL----FIKEDDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 219
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 220 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 251
>gi|229591623|ref|YP_002873742.1| putative methyltransferase [Pseudomonas fluorescens SBW25]
gi|229363489|emb|CAY50714.1| putative methyltransferase [Pseudomonas fluorescens SBW25]
Length = 254
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%), Gaps = 6/87 (6%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L+ + + +DLG G G + + V + + +
Sbjct: 36 LQAELVGQGAARLLDLGCGAGHVSFNMAPLVKE-----VVAYDLSQQMLDVVATAAVDRG 90
Query: 123 ARG-KVFACRIQEAPQMITTCDVISAR 148
+ + P D + +R
Sbjct: 91 FENIRTVQGAAERLPFADGEFDFVFSR 117
>gi|258406095|ref|YP_003198837.1| UvrD/REP helicase [Desulfohalobium retbaense DSM 5692]
gi|257798322|gb|ACV69259.1| UvrD/REP helicase [Desulfohalobium retbaense DSM 5692]
Length = 1132
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 88 ITSIQLSSIEGGL----VNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCD 143
+ L+ ++G L++ ++ +LR+V+Q+ R Q + D
Sbjct: 170 PLATLLAHLDGNTDQFEALLVDMLGRRDQWLRHVLQQ--------DARGQGRQILEAGLD 221
Query: 144 VISARALADLDTL 156
I +RALA+L
Sbjct: 222 RIVSRALAELTVF 234
>gi|205353498|ref|YP_002227299.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|205273279|emb|CAR38244.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326628591|gb|EGE34934.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 310
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + H + P +D+ +G G I + E V+ +
Sbjct: 111 LVPRSPIGELINNHFAGLIS-----QQPKYILDMCTGSGCIAIACAYAFPDAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +++ V R + D+I
Sbjct: 163 DISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIV 205
>gi|72175451|ref|XP_798637.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115949725|ref|XP_001184379.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 364
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 15/92 (16%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
++ + +DLG G G ++ + + V ++ + ++ + ++
Sbjct: 170 QIEERMKSGIRILDLGCGRGLASLVFAENYPN---STVVGLDFSEEAINYGKERAKEKGL 226
Query: 124 RGKVFACRIQEAP----------QMITTCDVI 145
F C ++A I T DVI
Sbjct: 227 TNVEFVC--EDAACIPDDWNNTIDYIYTFDVI 256
>gi|20089993|ref|NP_616068.1| ribosomal RNA adenine dimethylase [Methanosarcina acetivorans C2A]
gi|19914958|gb|AAM04548.1| ribosomal RNA adenine dimethylase [Methanosarcina acetivorans C2A]
Length = 275
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV-FAC 130
S +D+G+G G I + + V +E + L+ ++
Sbjct: 62 DSKVLDIGAGPGTLTIPLADMVKH-----VTAVEPSDGMLYCLKENIKAKELNNVSWIQK 116
Query: 131 RIQ--EAPQMITTCDVISA 147
+ + + + DV+ A
Sbjct: 117 KWEDIDLKDLDAPYDVVVA 135
>gi|51247071|ref|YP_066954.1| transcription regulator [Desulfotalea psychrophila LSv54]
gi|50878108|emb|CAG37964.1| probable transcription regulator [Desulfotalea psychrophila LSv54]
Length = 398
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 60 EDSLRVFQLHP-YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
DSL+ P +D+G G G + +I L+ V +++ + LR +
Sbjct: 171 IDSLQAINTIPVKSGELLDIGCGKG----VVTILLAEQTQFSVTALDNDEYSLACLRESL 226
Query: 119 QKTAARGKVFACRIQ--EAPQMITTCDVISA 147
+ + GKV A + DVI +
Sbjct: 227 DRKSQLGKVTAVCASMTDMSFSEHQFDVIWS 257
>gi|108808088|ref|YP_652004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pestis Antiqua]
gi|108812358|ref|YP_648125.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pestis Nepal516]
gi|145599288|ref|YP_001163364.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pestis Pestoides F]
gi|149365224|ref|ZP_01887259.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis CA88-4125]
gi|153947313|ref|YP_001400383.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pseudotuberculosis IP 31758]
gi|162420900|ref|YP_001604986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pestis Angola]
gi|165925296|ref|ZP_02221128.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165937109|ref|ZP_02225674.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
str. IP275]
gi|166008087|ref|ZP_02228985.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214242|ref|ZP_02240277.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398823|ref|ZP_02304347.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421362|ref|ZP_02313115.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424480|ref|ZP_02316233.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469289|ref|ZP_02333993.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pestis FV-1]
gi|170023754|ref|YP_001720259.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pseudotuberculosis YPIII]
gi|186896033|ref|YP_001873145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pseudotuberculosis PB1/+]
gi|218929822|ref|YP_002347697.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pestis CO92]
gi|229838317|ref|ZP_04458476.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229895347|ref|ZP_04510520.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis Pestoides A]
gi|229898882|ref|ZP_04514027.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis biovar Orientalis str. India 195]
gi|229902717|ref|ZP_04517834.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis Nepal516]
gi|270490110|ref|ZP_06207184.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Yersinia pestis KIM D27]
gi|294504663|ref|YP_003568725.1| hypothetical protein YPZ3_2553 [Yersinia pestis Z176003]
gi|108776006|gb|ABG18525.1| hypothetical protein YPN_2196 [Yersinia pestis Nepal516]
gi|108780001|gb|ABG14059.1| hypothetical protein YPA_2093 [Yersinia pestis Antiqua]
gi|115348433|emb|CAL21369.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145210984|gb|ABP40391.1| hypothetical protein YPDSF_2010 [Yersinia pestis Pestoides F]
gi|149291637|gb|EDM41711.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis CA88-4125]
gi|152958808|gb|ABS46269.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP
31758]
gi|162353715|gb|ABX87663.1| methyltransferase, HemK family [Yersinia pestis Angola]
gi|165914972|gb|EDR33584.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922903|gb|EDR40054.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165992469|gb|EDR44770.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204598|gb|EDR49078.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960851|gb|EDR56872.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051327|gb|EDR62735.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056362|gb|EDR66131.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169750288|gb|ACA67806.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Yersinia pseudotuberculosis YPIII]
gi|186699059|gb|ACC89688.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Yersinia pseudotuberculosis PB1/+]
gi|229680164|gb|EEO76263.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis Nepal516]
gi|229688430|gb|EEO80501.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis biovar Orientalis str. India 195]
gi|229694683|gb|EEO84730.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229701655|gb|EEO89681.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis Pestoides A]
gi|262362725|gb|ACY59446.1| hypothetical protein YPD4_2539 [Yersinia pestis D106004]
gi|270338614|gb|EFA49391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
L3-specific [Yersinia pestis KIM D27]
gi|294355122|gb|ADE65463.1| hypothetical protein YPZ3_2553 [Yersinia pestis Z176003]
gi|320014548|gb|ADV98119.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 310
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+H P+ +D+ +G G I + E V+ ++ N + + +Q+ +V
Sbjct: 129 IHHQPNHILDMCTGSGCIAIACAYAFPDAE---VDAVDISNDVLAVTEHNIQQHGMEHQV 185
Query: 128 FACRIQEAPQMIT-TCDVIS 146
R + D+I
Sbjct: 186 TPIRSDLFRDLPPIKYDLIV 205
>gi|116625677|ref|YP_827833.1| type 11 methyltransferase [Candidatus Solibacter usitatus
Ellin6076]
gi|116228839|gb|ABJ87548.1| Methyltransferase type 11 [Candidatus Solibacter usitatus
Ellin6076]
Length = 243
Score = 33.5 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 11/83 (13%)
Query: 65 VFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR 124
V L +D+G G G + G V I++ S +
Sbjct: 35 VEPLFEAGERILDIGCGTGEDAAHFA-----ARGVAVRAIDASPAMVS----AARARGVA 85
Query: 125 GKVFACRIQEAPQMITTCDVISA 147
+V CR ++ ++ T D +
Sbjct: 86 AEV--CRAEDVARIEETFDGAIS 106
>gi|288924992|ref|ZP_06418928.1| ribosomal protein L11 methyltransferase [Prevotella buccae D17]
gi|288338182|gb|EFC76532.1| ribosomal protein L11 methyltransferase [Prevotella buccae D17]
Length = 288
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 5/85 (5%)
Query: 64 RVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
+ + +D G G G I I + + V + R+ +
Sbjct: 145 TLLNMDLDGKRILDCGCGTG----ILGIAAAKMGAREVVGYDIDEWSVENTRHNAELNHV 200
Query: 124 RG-KVFACRIQEAPQMITTCDVISA 147
+V+ + DV+ A
Sbjct: 201 ENLEVYHGDAHVLNHVNGLFDVVLA 225
>gi|270263855|ref|ZP_06192123.1| hypothetical protein SOD_f00690 [Serratia odorifera 4Rx13]
gi|270042048|gb|EFA15144.1| hypothetical protein SOD_f00690 [Serratia odorifera 4Rx13]
Length = 347
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 9/104 (8%)
Query: 48 SSTVEDFWIRHVED---SLRVFQLHPY-PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
T+ + R D SL + L + +DLG G G + S ++ + L
Sbjct: 169 VKTLPGVFSRDGLDVGSSLLLSTLEKHMKGKVLDLGCGAGVMASVLSKLSPKVK---LTL 225
Query: 104 IESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ R + G+V + + D+I +
Sbjct: 226 SDVNAAAVESSRATLAANGIEGEVIVSNV--YSDITGRFDMIIS 267
>gi|62180957|ref|YP_217374.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|62128590|gb|AAX66293.1| putative methylase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715437|gb|EFZ07008.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 310
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + H + P +D+ +G G I + E V+ +
Sbjct: 111 LVPRSPIGELINNHFAGLIS-----QQPKYILDMCTGSGCIAIACAYAFPDAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +++ V R + D+I
Sbjct: 163 DISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIV 205
>gi|26988713|ref|NP_744138.1| UbiE/COQ5 family methlytransferase [Pseudomonas putida KT2440]
gi|24983503|gb|AAN67602.1|AE016390_1 methlytransferase, UbiE/COQ5 family [Pseudomonas putida KT2440]
gi|218684453|gb|ACL01080.1| unknown [Pseudomonas putida]
Length = 254
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 4/76 (5%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
+ +DLG G G + ++ + +L +S + ++ A
Sbjct: 46 ARVLDLGCGAGHVSFHVAPLVAEV--VAYDLSQSMLDVVA--SAAAERGLANITTERGAA 101
Query: 133 QEAPQMITTCDVISAR 148
+ P + D + +R
Sbjct: 102 ERLPFADASFDFVFSR 117
>gi|51596952|ref|YP_071143.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Yersinia pseudotuberculosis IP 32953]
gi|51590234|emb|CAH21871.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
Length = 333
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+H P+ +D+ +G G I + E V+ ++ N + + +Q+ +V
Sbjct: 152 IHHQPNHILDMCTGSGCIAIACAYAFPDAE---VDAVDISNDVLAVTEHNIQQHGMEHQV 208
Query: 128 FACRIQEAPQMIT-TCDVIS 146
R + D+I
Sbjct: 209 TPIRSDLFRDLPPIKYDLIV 228
>gi|223932123|ref|ZP_03624127.1| modification methylase, HemK family [Streptococcus suis 89/1591]
gi|302023744|ref|ZP_07248955.1| methyltransferase [Streptococcus suis 05HAS68]
gi|330832777|ref|YP_004401602.1| modification methylase, HemK family [Streptococcus suis ST3]
gi|223899104|gb|EEF65461.1| modification methylase, HemK family [Streptococcus suis 89/1591]
gi|329307000|gb|AEB81416.1| modification methylase, HemK family [Streptococcus suis ST3]
Length = 277
Score = 33.5 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L + + +D+G+G G I + S E V ++ + + +
Sbjct: 101 LILQENSGAGLRILDIGTGSGAIAISLAKARSDWE---VVAVDISKDALAVAQENARTNQ 157
Query: 123 ARGKVFACRIQEAPQMITTCDVISA 147
+ +A + D+I +
Sbjct: 158 VSVHFLESDVFQA--VTGQFDLIVS 180
>gi|329770374|ref|ZP_08261756.1| hypothetical protein HMPREF0433_01520 [Gemella sanguinis M325]
gi|328836497|gb|EGF86157.1| hypothetical protein HMPREF0433_01520 [Gemella sanguinis M325]
Length = 198
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 75 WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQE 134
D+G G G I + + + +I+ N+ + ++ K+
Sbjct: 61 VADVGCGYGVISIFLAKKNPNYN---FTMIDVNNRSLELSKKNIELNKIDNKIEIIESSS 117
Query: 135 APQMITTCDVI 145
+ T D++
Sbjct: 118 FDNVKGTFDIV 128
>gi|330798666|ref|XP_003287372.1| hypothetical protein DICPUDRAFT_32345 [Dictyostelium purpureum]
gi|325082639|gb|EGC36115.1| hypothetical protein DICPUDRAFT_32345 [Dictyostelium purpureum]
Length = 254
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 38 KW----SK-KINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQ 92
KW ++ NLV +T ++ + D + + ++LGSG G GI
Sbjct: 35 KWVVLKNENTYNLVGMTTWGAAYL--LSDFILQNKSLFENKNILELGSGTGLAGIALDYV 92
Query: 93 LSSIEGGLVNLIESKNKKASFLRYVVQKTAA 123
V L + K L+ ++
Sbjct: 93 KP---LKKVILTDYSPKVLKNLKENIELNNI 120
>gi|257899726|ref|ZP_05679379.1| modification methylase HemK [Enterococcus faecium Com15]
gi|293571481|ref|ZP_06682508.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecium E980]
gi|257837638|gb|EEV62712.1| modification methylase HemK [Enterococcus faecium Com15]
gi|291608486|gb|EFF37781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecium E980]
Length = 279
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ID+G+G G I + V+L E + A + Q + +
Sbjct: 111 DVPLEVIDIGTGTGAIAISLKAARKNWHVSAVDLSEEALEVA---KENAQHEGTKISFYH 167
Query: 130 CRIQEAPQMITTCDVISA 147
E Q DVI +
Sbjct: 168 GNTLEPVQDR-RFDVIIS 184
>gi|255020520|ref|ZP_05292584.1| Protein-L-isoaspartate O-methyltransferase [Acidithiobacillus
caldus ATCC 51756]
gi|254970040|gb|EET27538.1| Protein-L-isoaspartate O-methyltransferase [Acidithiobacillus
caldus ATCC 51756]
Length = 229
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V P +++G+G G+ + ++ +E + IE+ ++A+ + + +
Sbjct: 79 LEVLLQEASPHRVLEIGTGSGYHCALLAML--GMEVFSIERIEALQRRAA---ATLARLS 133
Query: 123 ARGKVFACRIQEAPQMITTCDVIS 146
+ D I
Sbjct: 134 LEVHLRHGDGALGWPERAPFDAIV 157
>gi|188990263|ref|YP_001902273.1| ubiquinone/menaquinone biosynthesis methyltransferase [Xanthomonas
campestris pv. campestris str. B100]
gi|167732023|emb|CAP50211.1| ubiquinone/menaquinone biosynthesis methyltransferase [Xanthomonas
campestris pv. campestris]
Length = 249
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 20/78 (25%), Gaps = 6/78 (7%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAAR-GKVFAC 130
+DLG G G + + V + + +
Sbjct: 40 NGRLLDLGCGAGHVSFQLAPLMDE-----VVAYDLSADMLEVVAATAADCGLTQVRTLQG 94
Query: 131 RIQEAPQMITTCDVISAR 148
+ P + DV+ +R
Sbjct: 95 VAERLPFESGSMDVVVSR 112
>gi|148557396|ref|YP_001264978.1| 3-demethylubiquinone-9 3-methyltransferase [Sphingomonas wittichii
RW1]
gi|148502586|gb|ABQ70840.1| 3-demethylubiquinone-9 3-methyltransferase [Sphingomonas wittichii
RW1]
Length = 244
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 7/76 (9%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
D+G G G + G V I++ + + R+ +K A
Sbjct: 67 GRRAADVGCGAGLLAEPLARM-----GAAVTGIDAAPENVAVARHHAKKQGLTIDYRAGG 121
Query: 132 IQEAPQMITTCDVISA 147
++ + D++++
Sbjct: 122 VEVLAG--ESFDLVTS 135
>gi|146312520|ref|YP_001177594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterobacter sp. 638]
gi|145319396|gb|ABP61543.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
[Enterobacter sp. 638]
Length = 310
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + H + P +D+ +G G I + E V+ +
Sbjct: 111 LVPRSPIGELINNHFA---GLMDHQPE--HILDMCTGSGCIAIACAYAYPEAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +++ V R + D+I
Sbjct: 163 DISTDALAVTEHNIEEHGLIHHVTPIRSDLFRDLPKLQYDLIV 205
>gi|94497249|ref|ZP_01303821.1| ubiquinone biosynthesis O-methyltransferase [Sphingomonas sp.
SKA58]
gi|94423354|gb|EAT08383.1| ubiquinone biosynthesis O-methyltransferase [Sphingomonas sp.
SKA58]
Length = 248
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 21/96 (21%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G G G + G V +++ + + + A
Sbjct: 68 EGRRALDVGCGAGLLTEPLARL-----GASVTGLDAAPENIAAALSHAESQGLTIDYRAT 122
Query: 131 RIQEAPQMITTCDVISA--------------RALAD 152
++E + D++++ RALA
Sbjct: 123 PVEEMAE--GGFDLVTSMEVIEHVVDPATFVRALAS 156
>gi|15602239|ref|NP_245311.1| hypothetical protein PM0374 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720620|gb|AAK02458.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 493
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 63 LRVFQLHP---YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
L + H + +++G G G I +++ + V+L E+ + + +V
Sbjct: 33 LSLLGFHTPHIEHAKVLEIGCGFGGNIISSALIHPNAHFVGVDLSET---QIEGGKAIVN 89
Query: 120 KTAARG-KVFACRIQEAPQMITTCDVISA 147
+ + ++ I D I
Sbjct: 90 QLGLKNVELLCQDISFFENSSIKFDYIVC 118
>gi|84683372|ref|ZP_01011275.1| methyltransferase, FkbM family protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84668115|gb|EAQ14582.1| methyltransferase, FkbM family protein [Rhodobacterales bacterium
HTCC2654]
Length = 225
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 24/96 (25%)
Query: 38 KWSKKINLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIE 97
+W+++ D RHV +D+G+G G+ I I +
Sbjct: 32 EWNER----------DAIERHV----------KPGDKVLDIGAGAGYISI---IAGRAAG 68
Query: 98 GGLVNLIESKNKKASFLRYVVQKTAARGK-VFACRI 132
V +E LR+ + + A+ V +
Sbjct: 69 PENVISVEGNPVMMEALRHNLDENGAQATQVLHGAV 104
>gi|75763956|ref|ZP_00743584.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74488558|gb|EAO52146.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 213
Score = 33.5 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGDILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 117 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|282864421|ref|ZP_06273477.1| Methyltransferase type 11 [Streptomyces sp. ACTE]
gi|282560908|gb|EFB66454.1| Methyltransferase type 11 [Streptomyces sp. ACTE]
Length = 384
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 73 SIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRI 132
S +DLG G G ++ + +G V ++ + A+ R + +V
Sbjct: 43 SAVLDLGCGTGSLALLAA-----GQGHRVTAVDRSPRMAA--RARAKLAGTGAEVLVGDA 95
Query: 133 QEAPQMITTCDVISAR 148
+ P DVI AR
Sbjct: 96 AQPPVGPRRFDVILAR 111
>gi|224024433|ref|ZP_03642799.1| hypothetical protein BACCOPRO_01158 [Bacteroides coprophilus DSM
18228]
gi|224017655|gb|EEF75667.1| hypothetical protein BACCOPRO_01158 [Bacteroides coprophilus DSM
18228]
Length = 409
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 2 KYCDSNSILRANYLLNTYNVSRETLEK----------LEYFYFLFLKWSKKINLVSSSTV 51
+Y D+ S+L+ + + +E + + F+ L L+ +++IN +
Sbjct: 34 RYSDALSLLKDDENRLKLLIEKEVIRQNGNYVELDARFLDFFELLLEANEEIN-TAIIDE 92
Query: 52 EDFWIRHVED 61
++ + D
Sbjct: 93 NIEYLHELID 102
>gi|220907414|ref|YP_002482725.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
gi|219864025|gb|ACL44364.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
Length = 444
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +D G G G+ ++ + ++ E+ A R +
Sbjct: 57 DGKLILDAGCGSGYKSLLLAAANPGAHIVGIDFSETSVNLAR-QRMQYHNLGNTSEFHVL 115
Query: 131 RIQEAPQMITTCDVI 145
I+E P + D I
Sbjct: 116 SIEELPSLGLQFDYI 130
>gi|161502470|ref|YP_001569583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160863817|gb|ABX20440.1| hypothetical protein SARI_00514 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 310
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%)
Query: 45 LVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLI 104
LV S + + H + P +D+ +G G I + E V+ +
Sbjct: 111 LVPRSPIGELINNHFAGLIS-----QQPKYILDMCTGSGCIAIACAYAFPDAE---VDAV 162
Query: 105 ESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMIT-TCDVIS 146
+ + + +++ V R + D+I
Sbjct: 163 DISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIV 205
>gi|86137331|ref|ZP_01055908.1| hypothetical protein MED193_05714 [Roseobacter sp. MED193]
gi|85825666|gb|EAQ45864.1| hypothetical protein MED193_05714 [Roseobacter sp. MED193]
Length = 536
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 7/82 (8%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKV 127
+ +LG G GF + + IE + ++ + R + + R
Sbjct: 40 FAQSELSYCELGCGQGFNSNLLAAANPHIE---FHAMDFNPAHIAGARELAAEGKIRNVH 96
Query: 128 FACR----IQEAPQMITTCDVI 145
F R P + DVI
Sbjct: 97 FYERSFADFDAEPTLPKQFDVI 118
>gi|83942066|ref|ZP_00954528.1| 3-demethylubiquinone-9 3-methyltransferase [Sulfitobacter sp.
EE-36]
gi|83847886|gb|EAP85761.1| 3-demethylubiquinone-9 3-methyltransferase [Sulfitobacter sp.
EE-36]
Length = 248
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + G V ++ + Q++ +
Sbjct: 66 RILDIGCGGGLLSEPMARL-----GATVVGADAAAGNIPVAQVHAQQSGLDIDYRHTTAE 120
Query: 134 EAPQMITTCDVI 145
+ DV+
Sbjct: 121 ALAEAGEQFDVV 132
>gi|323699539|ref|ZP_08111451.1| methyltransferase small [Desulfovibrio sp. ND132]
gi|323459471|gb|EGB15336.1| methyltransferase small [Desulfovibrio desulfuricans ND132]
Length = 253
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Query: 60 EDSLRVFQLHP--YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYV 117
DSL + +DLG G G + ++ + V L + +A+
Sbjct: 31 LDSLLLAAFANVTRGQTGLDLGCGCGVVALGLLLRQPGLRLAGVELN-PLSVRAAEENAA 89
Query: 118 VQKTAARGKVFACRIQEAPQMITTCDVISA 147
+ + + + + Q D + A
Sbjct: 90 SLHFSDKLSIIQGDVAD-WQPDGVVDFVVA 118
>gi|317483732|ref|ZP_07942676.1| precorrin-6Y C5,15-methyltransferase [Bilophila wadsworthia 3_1_6]
gi|316925016|gb|EFV46158.1| precorrin-6Y C5,15-methyltransferase [Bilophila wadsworthia 3_1_6]
Length = 497
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 11/86 (12%)
Query: 44 NLVSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNL 103
NL+++S V L +L + ++W D+G+G G G+ + ++ V
Sbjct: 268 NLITASDVRAVI-------LSRLRLPAWGTLW-DIGAGSGSVGLEAAGLRPNLN---VVG 316
Query: 104 IESKNKKASFLRYVVQKTAARGKVFA 129
IE K ++ + + +
Sbjct: 317 IERKPERGAIIERNRARLGVPNYTLH 342
>gi|307705718|ref|ZP_07642564.1| methyltransferase domain protein [Streptococcus mitis SK597]
gi|307620732|gb|EFN99822.1| methyltransferase domain protein [Streptococcus mitis SK597]
Length = 195
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR 131
+D G G G + + + V L++ K R ++ + F R
Sbjct: 37 DKEILDFGGGTGLLTLPLA-----KQAKFVTLVDISEKMLEQARLKAEQQDIKNIQFLER 91
Query: 132 IQEAPQMITTCD-VISARALADLDTL 156
+ D ++ R L + L
Sbjct: 92 DLLEKPLEKEFDLIVVCRVLHHMPDL 117
>gi|294631618|ref|ZP_06710178.1| RsmD family RNA methyltransferase [Streptomyces sp. e14]
gi|292834951|gb|EFF93300.1| RsmD family RNA methyltransferase [Streptomyces sp. e14]
Length = 195
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFA 129
+DL +G G G+ S G L+E+ + A +R V+ G +V
Sbjct: 46 DGERVLDLYAGSGAVGLEAL----SRGAGHTLLVEADARAARIVRENVKSLGLPGAEVRT 101
Query: 130 CRIQ---EAPQMITTCDVI 145
+ + ++P D++
Sbjct: 102 GKAEQIVQSPPPAGPYDIV 120
>gi|293382761|ref|ZP_06628686.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis R712]
gi|293388056|ref|ZP_06632584.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis S613]
gi|312908656|ref|ZP_07767598.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis DAPTO 512]
gi|312909196|ref|ZP_07768053.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis DAPTO 516]
gi|291079921|gb|EFE17285.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis R712]
gi|291082507|gb|EFE19470.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis S613]
gi|310625443|gb|EFQ08726.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis DAPTO 512]
gi|311290438|gb|EFQ68994.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterococcus
faecalis DAPTO 516]
Length = 422
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 56 IRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLR 115
+ H+ D L +D+G G G I+T+++ + + L E + R
Sbjct: 189 VHHILDKL----FIKEDDTLLDIGCGWGT-LILTAVKEYGAKATGITLSEEQFHHI---R 240
Query: 116 YVVQKTAARGKVFACRIQEAPQMITTCDVISA 147
++++K + ++ + + D I++
Sbjct: 241 HIIEKEGLQDRMTVKLMDYRDLKGESFDHITS 272
>gi|157813742|gb|ABV81616.1| putative protein arginine N-methyltransferase 1 [Mesocyclops edax]
Length = 244
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 61 DSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
+S+ + I +D+G G G I S+ + V I+ + +V+K
Sbjct: 12 NSMWHNKHLFKGKIVLDVGCGTG----ILSMFAAKAGAEHVYGIDMSG-IVEQAKNIVEK 66
Query: 121 TAA--RGKVFACRIQEAPQMITTCDVISA 147
+ + +++E +T D+I +
Sbjct: 67 NGLADKVTIIRGKMEEIVLPVTKVDIIIS 95
>gi|121712630|ref|XP_001273926.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119402079|gb|EAW12500.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 317
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 31/107 (28%), Gaps = 9/107 (8%)
Query: 46 VSSSTVEDFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIE 105
+ + ++ +E SL + +D+G+G G I S + ++
Sbjct: 34 TRLNIIHQVYLLLLEGSLTSVPITQNAPRILDIGTGPGDWAIEMSGMYPNA-----TIVA 88
Query: 106 SKNKKASFLRYVVQKTAARGKVFA-CRIQEAPQMITTCDVISARALA 151
S + F + D++ R L+
Sbjct: 89 SD---IGVFDGGLNDLDLPNVSFQLDDARRVWAYTEPFDLVHIRGLS 132
>gi|88601520|ref|YP_501698.1| hypothetical protein Mhun_0206 [Methanospirillum hungatei JF-1]
gi|88186982|gb|ABD39979.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
Length = 268
Score = 33.5 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 8/83 (9%)
Query: 68 LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGK- 126
L S ID+GSG G I + V IE + L + +
Sbjct: 58 LADSESQVIDIGSGPGALTIPFA-----RNVQSVTAIEPAAQMIQKLEENAKGENLKNIY 112
Query: 127 VFACRIQEA--PQMITTCDVISA 147
QE Q + D++
Sbjct: 113 PLQKTWQEVNTRQFEKSFDLVLC 135
>gi|328954787|ref|YP_004372120.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Coriobacterium glomerans PW2]
gi|328455111|gb|AEB06305.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Coriobacterium glomerans PW2]
Length = 337
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 14/96 (14%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+ +++G G G + + + + I+ + V + +
Sbjct: 155 DAARILEIGCGTGCISLAIASERPGQVKIVATDIDPSAVALAQRNRVA--LGLDEETISF 212
Query: 131 RIQE-----APQMITTCDVISA------RAL-ADLD 154
R + AP + DV+ + RA+ ADL
Sbjct: 213 REGDLAEPVAPDELAGFDVLVSNPPYIPRAVMADLP 248
>gi|300710973|ref|YP_003736787.1| hypothetical protein HacjB3_08050 [Halalkalicoccus jeotgali B3]
gi|299124656|gb|ADJ14995.1| hypothetical protein HacjB3_08050 [Halalkalicoccus jeotgali B3]
Length = 487
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 19/119 (15%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
V D L L P +D+G+G G P + + + ++ + IE A L V+
Sbjct: 147 VLDELGSRGLLPARLRVLDVGAGVGGPALALA-EYATDALVEYHAIEPSA-AADVLEGVL 204
Query: 119 QKTAARGK-VFACRIQEAPQMITTCDVIS--------ARA------LADLDTLLEYSFP 162
+T R EA + + + +RA A + L E S P
Sbjct: 205 AETPRNFHPTIHRRSAEAFEPDGVFALDTDGQRESDGSRAGYDLLLFA--NVLSELSEP 261
>gi|296333103|ref|ZP_06875557.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305672805|ref|YP_003864476.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149719|gb|EFG90614.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305411048|gb|ADM36166.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 201
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 6/74 (8%)
Query: 53 DFWIRHVEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKAS 112
DF R + DS F+ +D+G G G G+ + S + +++I+ +
Sbjct: 43 DFGSRLLIDS---FEEPEVEGSILDVGCGYGPIGLSLA---SDFKDRTIHMIDVNERAVE 96
Query: 113 FLRYVVQKTAARGK 126
++
Sbjct: 97 LSNENAEQNGITNV 110
>gi|260910407|ref|ZP_05917079.1| protein-(glutamine-N5) methyltransferase [Prevotella sp. oral taxon
472 str. F0295]
gi|260635483|gb|EEX53501.1| protein-(glutamine-N5) methyltransferase [Prevotella sp. oral taxon
472 str. F0295]
Length = 284
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G+G G ++ L + V+ I+ K QK A +
Sbjct: 116 TLLDIGTGSGCIATTLALDLPTWR---VSAIDISQKALEIATRNAQKLDAEVQFALQDAL 172
Query: 134 EAPQMITTCDVISA 147
P DVI +
Sbjct: 173 SMPPDTNLWDVIVS 186
>gi|228898854|ref|ZP_04063136.1| hypothetical protein bthur0014_880 [Bacillus thuringiensis IBL
4222]
gi|228860754|gb|EEN05132.1| hypothetical protein bthur0014_880 [Bacillus thuringiensis IBL
4222]
Length = 199
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 50 IEAFQMPDIKGDILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 103 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 136
>gi|228989310|ref|ZP_04149301.1| hypothetical protein bpmyx0001_870 [Bacillus pseudomycoides DSM
12442]
gi|228770388|gb|EEM18961.1| hypothetical protein bpmyx0001_870 [Bacillus pseudomycoides DSM
12442]
Length = 213
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + + V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGDVLDVGCGYGPIGLSLA---KEFQERSVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A KV RI ++ + I + RA
Sbjct: 117 ANNKVENVRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|227552472|ref|ZP_03982521.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterococcus faecium TX1330]
gi|257888290|ref|ZP_05667943.1| modification methylase HemK [Enterococcus faecium 1,141,733]
gi|257896820|ref|ZP_05676473.1| modification methylase HemK [Enterococcus faecium Com12]
gi|293378551|ref|ZP_06624714.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecium PC4.1]
gi|227178384|gb|EEI59356.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Enterococcus faecium TX1330]
gi|257824344|gb|EEV51276.1| modification methylase HemK [Enterococcus faecium 1,141,733]
gi|257833385|gb|EEV59806.1| modification methylase HemK [Enterococcus faecium Com12]
gi|292642880|gb|EFF61027.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Enterococcus faecium PC4.1]
Length = 279
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 4/78 (5%)
Query: 70 PYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFA 129
P ID+G+G G I + V+L E + A + Q + +
Sbjct: 111 DVPLEVIDIGTGTGAIAISLKAARKNWHVSAVDLSEEALEVA---KENAQHEGTKISFYH 167
Query: 130 CRIQEAPQMITTCDVISA 147
E Q DVI +
Sbjct: 168 GNTLEPVQDR-RFDVIIS 184
>gi|326444994|ref|ZP_08219728.1| hypothetical protein SclaA2_28185 [Streptomyces clavuligerus ATCC
27064]
Length = 102
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISAR--ALADLD-TLLEYSFP 162
+ R +P+ D++ AR A A L L +++ P
Sbjct: 21 ELVQIPATTEGIRATLSPKRAAEFDLVVARTHA-AKLPQVLADWALP 66
>gi|148544923|ref|YP_001272293.1| cobalt-precorrin-6Y C(15)-methyltransferase [Lactobacillus reuteri
DSM 20016]
gi|184154260|ref|YP_001842601.1| cobalt-precorrin-6Y C(15)-methyltransferase [Lactobacillus reuteri
JCM 1112]
gi|227364063|ref|ZP_03848163.1| precorrin-6B methyltransferase [Lactobacillus reuteri MM2-3]
gi|325683268|ref|ZP_08162784.1| precorrin-8W decarboxylase [Lactobacillus reuteri MM4-1A]
gi|60172688|gb|AAX14522.1| precorrin-8w decarboxylase [Lactobacillus reuteri]
gi|148531957|gb|ABQ83956.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
subunit [Lactobacillus reuteri DSM 20016]
gi|183225604|dbj|BAG26121.1| precorrin-8W decarboxylase CbiT [Lactobacillus reuteri JCM 1112]
gi|227070985|gb|EEI09308.1| precorrin-6B methyltransferase [Lactobacillus reuteri MM2-3]
gi|324977618|gb|EGC14569.1| precorrin-8W decarboxylase [Lactobacillus reuteri MM4-1A]
Length = 184
Score = 33.5 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Query: 69 HPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVF 128
+ ++D+G+G G I + + ++ V IE N ++ + K
Sbjct: 28 LNDKNTFLDIGAGTGSISIQAAREFPNLN---VTAIEMNNAGIDIIKQNINKFNLHNINL 84
Query: 129 ACRIQEAPQMITTCDVI 145
I D I
Sbjct: 85 IKGIAPQDIPNQKYDAI 101
>gi|332360926|gb|EGJ38731.1| methyltransferase domain protein [Streptococcus sanguinis SK355]
Length = 195
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
L V +D+G G G + L+ G +++ + + ++
Sbjct: 50 LSVLDF-EAGERVLDVGCGYG----PLGLSLAKAYGVAATMVDINQRALDLAQKNAERNQ 104
Query: 123 ARGKVFACRIQEAPQMITTCDVISA----RA 149
+F + ++ D + + RA
Sbjct: 105 ISAHIFQSNV--YEKVSGIFDHVISNPPIRA 133
>gi|326387206|ref|ZP_08208816.1| putative methyltransferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208387|gb|EGD59194.1| putative methyltransferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 278
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 25/90 (27%), Gaps = 9/90 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D++ S +D+G G G + + + I+ + R
Sbjct: 33 LLDAIA----KEPGSHILDIGCGAGELSLALAAARPEAR---IAGIDIGPDLVAAARE-- 83
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + D++ +R
Sbjct: 84 RASGTAVTFHCGDAGVFVDPAGAPDLLVSR 113
>gi|253996070|ref|YP_003048134.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
[Methylotenera mobilis JLW8]
gi|253982749|gb|ACT47607.1| modification methylase, HemK family [Methylotenera mobilis JLW8]
Length = 303
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Query: 61 DSLRVF-QLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQ 119
D L + + + D+ +G G G++ + V++I+ +
Sbjct: 121 DGLAPWIEFPELINNAADICTGSGCLGVLLADAYPD---AAVDVIDISQDAIDVCNININ 177
Query: 120 KTAARGKVFACRIQEAPQMITT-CDVISA 147
+ ++ A + Q+ D+I +
Sbjct: 178 AYGLQDRITAIKSDMFSQLKGKQYDLIIS 206
>gi|257125483|ref|YP_003163597.1| methyltransferase type 12 [Leptotrichia buccalis C-1013-b]
gi|257049422|gb|ACV38606.1| Methyltransferase type 12 [Leptotrichia buccalis C-1013-b]
Length = 514
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARG-KVFAC 130
+ ++LGS G I ++ E V+L + KK + V++K + K+
Sbjct: 41 KARILELGSSFGGNIITQALYNPEAEFVGVDLTAEQVKKGN---EVIEKIGLKNIKLIEK 97
Query: 131 RIQEAPQMITTCDVIS 146
I + + D I
Sbjct: 98 NILDINEDFGKFDYII 113
>gi|227536765|ref|ZP_03966814.1| type 12 methyltransferase [Sphingobacterium spiritivorum ATCC
33300]
gi|227243385|gb|EEI93400.1| type 12 methyltransferase [Sphingobacterium spiritivorum ATCC
33300]
Length = 237
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 15/100 (15%)
Query: 75 WIDLGSGGG-FPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G G G +P + S + LV+L + KA + + T+ R Q
Sbjct: 55 VLDVGCGAGNYPVKLLSKVR-NPNITLVDLSKPMLDKA--VERIKPLTSGRVDAIKADFQ 111
Query: 134 EAPQMITTCDVISARAL-----------ADLDTLLEYSFP 162
+ DVI A A+ + E+ P
Sbjct: 112 TLEFPAGSFDVIVATAVLHHLRTDADWESAFAKFYEWLRP 151
>gi|126724620|ref|ZP_01740463.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacterales
bacterium HTCC2150]
gi|126705784|gb|EBA04874.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacterales
bacterium HTCC2150]
Length = 247
Score = 33.5 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQ 133
+D+G GGG + + V ++ ++ R +++ +
Sbjct: 64 RILDIGCGGGLLSEPMARLGAD-----VVGADAADRNLPIARLHAEQSGLTIDYRHTTAE 118
Query: 134 EAPQMITTCDVI 145
DV+
Sbjct: 119 AMAADGEQFDVV 130
>gi|298707173|emb|CBJ29946.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 333
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 7/88 (7%)
Query: 64 RVFQLHPYPSI--WIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA---SFLRYVV 118
+ P + IDLG G G + + V++ S K A + L
Sbjct: 151 TCLKYKPQGEVKNVIDLGCGTGLSMYMVQTAWPQADLVGVDM--STYKLAISQAKLEKKP 208
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVIS 146
+ ++ + +E + D+ +
Sbjct: 209 KSMQSKVTLRHAPAEETGEPSNKFDLAT 236
>gi|316933204|ref|YP_004108186.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris DX-1]
gi|315600918|gb|ADU43453.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris DX-1]
Length = 327
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 11/93 (11%)
Query: 62 SLRVFQLHPY---PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
L + L P +DLG+G G + +I + V + + + R
Sbjct: 173 CLTLLDLVLRAGPPQRVLDLGTGTG----VLAIAAAKALRHTVLATDIDKQSVAVARENA 228
Query: 119 QKTAARGKVFA----CRIQEAPQMITTCDVISA 147
+ V A D++ A
Sbjct: 229 RLNGVGNLVQAEWATGFASPVFAAHAPFDLVLA 261
>gi|302520733|ref|ZP_07273075.1| methyltransferase [Streptomyces sp. SPB78]
gi|302429628|gb|EFL01444.1| methyltransferase [Streptomyces sp. SPB78]
Length = 308
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 4/99 (4%)
Query: 53 DFWIRHVEDSLRV-FQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKA 111
+ H+ SL L P +DLGSG G + V+ ++
Sbjct: 60 EVLASHIA-SLTDWLPLTAAPRHIVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRL 118
Query: 112 SFLRYVVQKTAARGKVFACRIQEAP-QMITTCDVISARA 149
+ R + + A + T D++ A A
Sbjct: 119 RE-KACAAGLDGRVRTVHADLDAAAWPDLGTPDLVWASA 156
>gi|229125618|ref|ZP_04254650.1| hypothetical protein bcere0015_880 [Bacillus cereus BDRD-Cer4]
gi|228657810|gb|EEL13616.1| hypothetical protein bcere0015_880 [Bacillus cereus BDRD-Cer4]
Length = 213
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 117 ANNKIKNIRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|229188386|ref|ZP_04315434.1| hypothetical protein bcere0002_880 [Bacillus cereus ATCC 10876]
gi|228595060|gb|EEK52831.1| hypothetical protein bcere0002_880 [Bacillus cereus ATCC 10876]
Length = 213
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 64 IEAFQMPDIKGDILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 116
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 117 ANNKIENIRIFQSSVYENVDGKYAAILSNPPIRA 150
>gi|221234059|ref|YP_002516495.1| hypothetical protein CCNA_01122 [Caulobacter crescentus NA1000]
gi|220963231|gb|ACL94587.1| conserved hypothetical protein [Caulobacter crescentus NA1000]
Length = 511
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Query: 94 SSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACRIQEAPQMITTCDVISAR 148
+ + ++ ++ F V A R ++ D I AR
Sbjct: 441 PQVSAFRMGAVDGLVRRDRFEEAAVLLQPLLNNPHASR-EQVQAWRQQFDEIVAR 494
>gi|163791114|ref|ZP_02185533.1| ribosomal protein L11 methyltransferase (putative) [Carnobacterium
sp. AT7]
gi|159873586|gb|EDP67671.1| ribosomal protein L11 methyltransferase (putative) [Carnobacterium
sp. AT7]
Length = 317
Score = 33.5 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 17/107 (15%)
Query: 62 SLRVFQ-LHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQK 120
SL+ + +D+G+G G + SI ++ V+ + + ++ V+
Sbjct: 165 SLQALETYIRGNETILDVGTGSG----VLSIASKALGAKHVHAYDLDD---VAVKAAVEN 217
Query: 121 TAAR--GKVFACRIQEAPQMIT-TCDVISARALADLDTLLEYSFPWL 164
K + + + +T D++ A + L E P +
Sbjct: 218 INLNDYAKDVVVKANDLLKGVTIEADIVVA------NILAEIIVPLI 258
>gi|332291079|ref|YP_004429688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Krokinobacter diaphorus 4H-3-7-5]
gi|332169165|gb|AEE18420.1| protein-(glutamine-N5) methyltransferase, release factor-specific
[Krokinobacter diaphorus 4H-3-7-5]
Length = 288
Score = 33.5 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
Query: 71 YPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFAC 130
+D+G+G G I + + V I+ + ++ +
Sbjct: 120 EKLKILDIGTGSGCIAISLA---KYMSKAHVEAIDISQDALATAYQNAKRNEVDVTFYNQ 176
Query: 131 RIQEAPQMITTCDVISA 147
+ ++ D+I +
Sbjct: 177 DVLAVEELEHKYDIIVS 193
>gi|332715471|ref|YP_004442937.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium sp.
H13-3]
gi|325062156|gb|ADY65846.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium sp.
H13-3]
Length = 410
Score = 33.5 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 59 VEDSLRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVV 118
+ D L++ +++G G G +I L++ V + + ++ +
Sbjct: 186 IVDKLQL----SGGESVLEIGCGWG----ALAIHLATQADANVTGLTLSPSQLNWAKAAA 237
Query: 119 QKTAARGKVFACRIQEAPQMITTCDVISA 147
+KT + + R+++ + D I +
Sbjct: 238 EKTD-KAEHIDLRLEDYRDVEGKFDRIVS 265
>gi|300088155|ref|YP_003758677.1| methyltransferase type 11 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527888|gb|ADJ26356.1| Methyltransferase type 11 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 276
Score = 33.5 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 12/79 (15%)
Query: 72 PSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKT---AARGKVF 128
SI D+G+G G I++ + + + IE K +R ++ AA +
Sbjct: 68 NSIVADIGAGAG---ILSKLLGPHAK--QIMAIEPDAK----MRQTAEQHLRDAANVSII 118
Query: 129 ACRIQEAPQMITTCDVISA 147
+ + + D+I+A
Sbjct: 119 SGSAEATGLEKESIDLITA 137
>gi|30018371|ref|NP_830002.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus ATCC 14579]
gi|29893911|gb|AAP07203.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus ATCC 14579]
Length = 199
Score = 33.5 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 14/94 (14%)
Query: 63 LRVFQLHPYPSIWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTA 122
+ FQ+ +D+G G G G+ + +G V++++ + + ++ A
Sbjct: 50 IEAFQMPDIKGNILDVGCGYGPIGLSLA---KEFQGREVHMVDVNERALG----LAKENA 102
Query: 123 ARGKVFACRIQEA---PQMITTCDVISA----RA 149
A K+ RI ++ + I + RA
Sbjct: 103 ANNKIKNIRIFQSSVYENVDGKYAAILSNPPIRA 136
>gi|67524179|ref|XP_660151.1| hypothetical protein AN2547.2 [Aspergillus nidulans FGSC A4]
gi|40745496|gb|EAA64652.1| hypothetical protein AN2547.2 [Aspergillus nidulans FGSC A4]
gi|259487978|tpe|CBF87072.1| TPA: polyketide synthase, putative (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 2534
Score = 33.5 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Query: 74 IWIDLGSGGGFPGIITSIQLSSIEGGLVNLIESKNKKASFLRYVVQKTAARGKVFACR-- 131
+++G+G G + L+ G + + + F ++ V R
Sbjct: 1439 KVLEIGAGTGSATLPILKALNDCSGRFIQRYDFTDISPGFFEPAKERLGDLANVVEFRVL 1498
Query: 132 -----IQEAPQMITTCDVISA 147
QE D+I A
Sbjct: 1499 DAGRNAQEQGFEEGAYDLIVA 1519
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.170 0.530
Lambda K H
0.267 0.0518 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,713,009,509
Number of Sequences: 14124377
Number of extensions: 169968143
Number of successful extensions: 497945
Number of sequences better than 10.0: 5982
Number of HSP's better than 10.0 without gapping: 2691
Number of HSP's successfully gapped in prelim test: 5437
Number of HSP's that attempted gapping in prelim test: 486051
Number of HSP's gapped (non-prelim): 8286
length of query: 168
length of database: 4,842,793,630
effective HSP length: 128
effective length of query: 40
effective length of database: 3,034,873,374
effective search space: 121394934960
effective search space used: 121394934960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 76 (33.5 bits)