HHsearch alignment for GI: 254780808 and conserved domain: COG0665
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].
Probab=98.36 E-value=3.1e-06 Score=63.79 Aligned_cols=157 Identities=21% Similarity=0.256 Sum_probs=83.1
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH-------CCCCCC---CCC-----C----------------
Q ss_conf 876357889889426899999998589989999807626-------012466---700-----2----------------
Q gi|254780808|r 2 INRSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTST-------IGSMSC---NPA-----I---------------- 50 (626)
Q Consensus 2 ~~~~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~-------~ael~C---nps-----~---------------- 50 (626)
T Consensus 1 ~~~~~~vvIIGgGi~Gls~A~~La~~G~~V~vie~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 80 (387)
T COG0665 1 MSMKMDVVIIGGGIVGLSAAYYLAERGADVTVLEAGEAGGGAAGRNAGGILAPWASPGGELEVRPLADLSLALWRELSEE 80 (387)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99764399989869999999999976991999917988767667767777524235553033433799999999998875
Q ss_pred ----------CCC-----C-------HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCC--CCCCCCC-HHHHHHHHHH
Q ss_conf ----------211-----2-------248999998630399--99998863148873078--7855534-6787849999
Q gi|254780808|r 51 ----------GGL-----G-------KGHLVREIDALDGLM--GRVADAAGIQFRVLNVK--KGPAVRG-PRTQADRELY 103 (626)
Q Consensus 51 ----------gg~-----a-------kg~L~~Ei~aLgg~m--~~~aD~~~i~~r~ln~s--kGpAv~a-lraqvDR~~f 103 (626)
T Consensus 81 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~l~~~~~~~-~~~~~~~~~~~p~~~ 158 (387)
T COG0665 81 LGTGAGLRRRGLLDLAAREGLKGLAQLERLAAELEAAGEDAELLDAAEAAEL-EPALGPDFVCG-GLFDPTGGHLDPRLL 158 (387)
T ss_pred CCCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-CCCCCCCCCEE-EEECCCCCEECHHHH
T ss_conf 3766445662429988446743256689999999860210011888787663-73337764334-598488834578999
Q ss_pred HHHHHHHHHCCC-CCEEEHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 999999997089-96898001011202588113222035863344543334664310134
Q gi|254780808|r 104 RLAMQREILSQE-NLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFLRGVI 162 (626)
Q Consensus 104 s~~vt~~l~~~p-ni~i~~~eV~~l~~~~~~~~~v~~~~g~~~~~~~viiatGtfl~g~~ 162 (626)
T Consensus 159 ~~~l~~~~~~~G~~~~~~~~~v~~~~~~~-~~~~v~t~~g~-~~a~~vv~a~G~~~~~l~ 216 (387)
T COG0665 159 TRALAAAAEELGVVIIEGGTPVTSLERDG-RVVGVETDGGT-IEADKVVLAAGAWAGELA 216 (387)
T ss_pred HHHHHHHHHHCCCCEEECCCCEEEEEECC-CEEEEEECCCE-EECCEEEECCCCCHHHHH
T ss_conf 99999999973991897235246776147-35899958970-981989999996435555