HHsearch alignment for GI: 254780808 and conserved domain: KOG1335
>KOG1335 consensus.
Probab=97.86 E-value=6.9e-05 Score=54.26 Aligned_cols=133 Identities=26% Similarity=0.409 Sum_probs=74.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH---HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 635788988942689999999858998999980762---60124667002211224899999863039999998863148
Q gi|254780808|r 4 RSYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTS---TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQF 80 (626)
Q Consensus 4 ~~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~---~~ael~Cnps~gg~akg~L~~Ei~aLgg~m~~~aD~~~i~~ 80 (626)
T Consensus 38 ~~~DvvvIG~GpGGyvAAikAaQlGlkTacvEkr~~LGGTcLnvGcIPSKALL~nSh~yh~~q~~--~~----~~rGi-- 109 (506)
T KOG1335 38 NDYDVVVIGGGPGGYVAAIKAAQLGLKTACVEKRGTLGGTCLNVGCIPSKALLNNSHLYHEAQHE--DF----ASRGI-- 109 (506)
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH--HH----HHCCC--
T ss_conf 66788998778725899999987154168873157536545643633538876333789988766--89----86093--
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHH----------HHHCCCCCEEEHHHHCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 87307878555346787849999999999----------99708996898001011202588113222035863344543
Q gi|254780808|r 81 RVLNVKKGPAVRGPRTQADRELYRLAMQR----------EILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTV 150 (626)
Q Consensus 81 r~ln~skGpAv~alraqvDR~~fs~~vt~----------~l~~~pni~i~~~eV~~l~~~~~~~~~v~~~~g~~~~~~~v 150 (626)
T Consensus 110 ---------~vs~--~~~dl~~~~~~k~n~vk~Lt~gi~~lfkknkVt~~kG~gs~~~p~~V~-v~k~dg~~~ii~aKnI 177 (506)
T KOG1335 110 ---------DVSS--VSLDLQAMMKAKDNAVKQLTGGIENLFKKNKVTYVKGFGSFLDPNKVS-VKKIDGEDQIIKAKNI 177 (506)
T ss_pred ---------CCCC--EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCEEE-EECCCCCCEEEEEEEE
T ss_conf ---------1132--004789999877778999766899887634838995137653874688-8535897337863169
Q ss_pred CCCCCC
Q ss_conf 334664
Q gi|254780808|r 151 VLTTGT 156 (626)
Q Consensus 151 iiatGt 156 (626)
T Consensus 178 iiATGS 183 (506)
T KOG1335 178 IIATGS 183 (506)
T ss_pred EEECCC
T ss_conf 996177