HHsearch alignment for GI: 254780808 and conserved domain: KOG2404

Probab=97.44  E-value=0.00076  Score=46.86  Aligned_cols=141  Identities=23%  Similarity=0.272  Sum_probs=84.5

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHC--------------------------CCCCCCCCCCCCCHHHHHH
Q ss_conf             78898894268999999985899899998076260--------------------------1246670022112248999
Q gi|254780808|r    7 DVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTI--------------------------GSMSCNPAIGGLGKGHLVR   60 (626)
Q Consensus         7 dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~--------------------------ael~Cnps~gg~akg~L~~   60 (626)
T Consensus        11 pvvVIGgGLAGLsasn~iin~gg~V~llek~~s~GGNSiKAsSGINgA~TetQ~~~~i~Dsp~lf~~Dtl-~saksk~~~   89 (477)
T KOG2404          11 PVVVIGGGLAGLSASNDIINKGGIVILLEKAGSIGGNSIKASSGINGAGTETQEKLHIKDSPELFVKDTL-SSAKSKGVP   89 (477)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHCCCCCCHHHHHHHHH-HHCCCCCCH
T ss_conf             0799877403235677787448759998246776775201025767776145653165667677764024-320347868


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-----------C-----------CCCC--CCCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99863039999998863148873-----------0-----------7878--5553467878499999999999970899
Q gi|254780808|r   61 EIDALDGLMGRVADAAGIQFRVL-----------N-----------VKKG--PAVRGPRTQADRELYRLAMQREILSQEN  116 (626)
Q Consensus        61 Ei~aLgg~m~~~aD~~~i~~r~l-----------n-----------~skG--pAv~alraqvDR~~fs~~vt~~l~~~pn  116 (626)
T Consensus        90 e------Lm~~La~~S~~AvewL~~ef~lkld~la~lgGHSvpRTHr~s~plppgfei-~~----~L~~~l~k~as~~pe  158 (477)
T KOG2404          90 E------LMEKLAANSASAVEWLRGEFDLKLDLLAQLGGHSVPRTHRSSGPLPPGFEI-VK----ALSTRLKKKASENPE  158 (477)
T ss_pred             H------HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH-HH----HHHHHHHHHHHCCHH
T ss_conf             9------999987368878999863306266899872587877534568999996089-99----999998876531807


Q ss_pred             CE--EEHHHHCCCCCCCCCEEEEEECCC----CCCCCCCCCCCCCCCCH
Q ss_conf             68--980010112025881132220358----63344543334664310
Q gi|254780808|r  117 LD--VIQGEVAGFNTEKNIISSIVMQDN----SMIRCSTVVLTTGTFLR  159 (626)
Q Consensus       117 i~--i~~~eV~~l~~~~~~~~~v~~~~g----~~~~~~~viiatGtfl~  159 (626)
T Consensus       159 ~~ki~~nskvv~il~n~gkVsgVeymd~sgek~~~~~~~VVlatGGf~y  207 (477)
T KOG2404         159 LVKILLNSKVVDILRNNGKVSGVEYMDASGEKSKIIGDAVVLATGGFGY  207 (477)
T ss_pred             HHHHHHCCEEEEEECCCCEEEEEEEECCCCCCCCEECCCEEEECCCCCC
T ss_conf             7732313624564427880777999757897250104736995277675