HHsearch alignment for GI: 254780808 and conserved domain: PRK04965

>PRK04965 nitric oxide reductase; Provisional.
Probab=98.18  E-value=8.8e-06  Score=60.60  Aligned_cols=105  Identities=24%  Similarity=0.375  Sum_probs=61.2

Q ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8763578898894268999999985899--899998076260124667-0022112248999998630399999988631
Q gi|254780808|r    2 INRSYDVIVIGGGHAGCEAAAVAAKLGA--STALITHKTSTIGSMSCN-PAIGGLGKGHLVREIDALDGLMGRVADAAGI   78 (626)
Q Consensus         2 ~~~~~dViVIGaG~AG~EAA~~~Ar~G~--~v~L~~~~~~~~ael~Cn-ps~gg~akg~L~~Ei~aLgg~m~~~aD~~~i   78 (626)
T Consensus         1 M~~~--IVIIG~G~AG~~aa~~lR~~d~~~~Itvi~~e~~----~~Y~rp~Ls-----~~~~-----~~---~~~~~l--   59 (378)
T PRK04965          1 MSNG--IVIIGSGFAARQLVKNIRKQDAHIPITLITADSG----DEYNKPDLS-----HVFS-----QG---QRADDL--   59 (378)
T ss_pred             CCCC--EEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCC----CCCCCCCCH-----HHHC-----CC---CCHHHH--
T ss_conf             9899--9999882999999999971194986999989999----887678166-----9882-----89---996895--


Q ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHH-HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             48873078785553467878499999999999970899689800-1011202588113222035863344543334664
Q gi|254780808|r   79 QFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG-EVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGT  156 (626)
Q Consensus        79 ~~r~ln~skGpAv~alraqvDR~~fs~~vt~~l~~~pni~i~~~-eV~~l~~~~~~~~~v~~~~g~~~~~~~viiatGt  156 (626)
T Consensus        60 -----------~~------~~~~--------~~~~~~~I~l~~~~~V~~ID~~~k~V----~~~g~~~~YDkLVLATGa  109 (378)
T PRK04965         60 -----------TR------QSAG--------EFAEQFNLRLFPHTWVTDIDAEAQVV----KSQGNQWQYDKLVLATGA  109 (378)
T ss_pred             -----------HC------CCHH--------HHHHHCCEEEECCCEEEEECCCCCEE----EECCCEEECCEEEEECCC
T ss_conf             -----------31------7989--------99874897998698999984646379----958919846879993588