HHsearch alignment for GI: 254780808 and conserved domain: PRK05335
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed.
Probab=90.50 E-value=0.13 Score=30.91 Aligned_cols=58 Identities=21% Similarity=0.355 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCC--CCHHHHHH------HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 000000001232--00147776------402457541443235642225532123356764334520130157877
Q gi|254780808|r 235 NRQIECGITRTN--LETHRIIM------ENIKHSAIYSGDIKSYGPRYCPSIEDKIVRFGERNGHQIFLEPEGLNT 302 (626)
Q Consensus 235 ~~q~~~~~~~t~--~~~~~~~~------~~~~~~~~~~g~~~~~gprycPsie~k~~~~~~~p~h~VqLrpE~~~~ 302 (626)
T Consensus 188 ~dylncpl~~e~y~~f~~~l~~a~~~~~~~~e~~~~feG---------C~pIE~~a~rg~~~lrfgp-~kPvGL~d 253 (434)
T PRK05335 188 ADYLNCPMTKEEYEAFYEALIAAEKAPLKDFEKEKYFEG---------CLPIEVMAERGRETLRFGP-MKPVGLED 253 (434)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC---------CCCHHHHHHCCCCCEECCC-CCCCCCCC
T ss_conf 552238998799889998752002035665445766578---------8778877414765320267-65667778