HHsearch alignment for GI: 254780808 and conserved domain: PRK06069
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=99.19 E-value=4.7e-10 Score=90.92 Aligned_cols=156 Identities=20% Similarity=0.264 Sum_probs=82.3
Q ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC---CCCEEEEECCHH----HC-C--CC--CCCCCCCCCCH-HHHHHHHHHHHH-
Q ss_conf 87635788988942689999999858---998999980762----60-1--24--66700221122-489999986303-
Q gi|254780808|r 2 INRSYDVIVIGGGHAGCEAAAVAAKL---GASTALITHKTS----TI-G--SM--SCNPAIGGLGK-GHLVREIDALDG- 67 (626)
Q Consensus 2 ~~~~~dViVIGaG~AG~EAA~~~Ar~---G~~v~L~~~~~~----~~-a--el--~Cnps~gg~ak-g~L~~Ei~aLgg- 67 (626)
T Consensus 2 ~~~~~DVlVIG~G~AGl~AA~~a~~~~~~~~~V~lv~K~~~~~s~s~~a~gG~~a~~~~~~~~Ds~~~~~~Dt~~~g~~l 81 (582)
T PRK06069 2 EVLKYDVVIVGSGLAGLRAAVAAARASGGKISIAVVSKTQAMRSHSVSAEGGTAAVLYPEKTGDSPELHAYDTVKGSDFL 81 (582)
T ss_pred CEEECCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 77870689999739999999999985389986999979899997089998779987178889999899999999853688
Q ss_pred ----HHHHHHHHHHHHHHHHCC-----CC---C-----C-CCC----CHHHHHHHHH--HHHHHHHHHHCCCCCEEEHH-
Q ss_conf ----999999886314887307-----87---8-----5-553----4678784999--99999999970899689800-
Q gi|254780808|r 68 ----LMGRVADAAGIQFRVLNV-----KK---G-----P-AVR----GPRTQADREL--YRLAMQREILSQENLDVIQG- 122 (626)
Q Consensus 68 ----~m~~~aD~~~i~~r~ln~-----sk---G-----p-Av~----alraqvDR~~--fs~~vt~~l~~~pni~i~~~- 122 (626)
T Consensus 82 ~d~~lv~~l~~~a~~~v~~le~~Gv~f~r~~~G~~~~~~~gGhs~~R~~~~-~d~tG~~i~~~l~~~~~~~~gv~~~~~~ 160 (582)
T PRK06069 82 ADQDAVEVLVREAPEEIRFLDHWGVPWSRDPDGRISQRPFGGMSFPRTTFA-ADKTGFYIMSTLYSRALRFDNIHFYHEH 160 (582)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCEEECC-CCCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 889999999998999999999769971068999887521587034500036-7875399999999999846994899778
Q ss_pred HHCCCCCCCCCEEEEEECC---C--CCCCCCCCCCCCCCCC
Q ss_conf 1011202588113222035---8--6334454333466431
Q gi|254780808|r 123 EVAGFNTEKNIISSIVMQD---N--SMIRCSTVVLTTGTFL 158 (626)
Q Consensus 123 eV~~l~~~~~~~~~v~~~~---g--~~~~~~~viiatGtfl 158 (626)
T Consensus 161 ~vt~Ll~~~g~v~Ga~~~d~~~G~~~~i~AkaVVlATGG~g 201 (582)
T PRK06069 161 FVTSLIVENGVFKGVTAIDLRRGEFKVFQAKAGIIATGGAG 201 (582)
T ss_pred EEEEEEECCCEEEEEEEEECCCCEEEEEEECEEEECCCCCC
T ss_conf 98888743998999999976898299998255998988675