HHsearch alignment for GI: 254780808 and conserved domain: PRK06475

Probab=98.00  E-value=1.2e-05  Score=59.77  Aligned_cols=142  Identities=15%  Similarity=0.278  Sum_probs=78.4

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH--CCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----H
Q ss_conf             357889889426899999998589989999807626--012-466700221122489999986303999999886----3
Q gi|254780808|r    5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTST--IGS-MSCNPAIGGLGKGHLVREIDALDGLMGRVADAA----G   77 (626)
Q Consensus         5 ~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~--~ae-l~Cnps~gg~akg~L~~Ei~aLgg~m~~~aD~~----~   77 (626)
T Consensus         2 r~~VlIVGaGiaGL~~A~~L~~~G~~v~V~E~~~~~~~~G~gi~l~pn--------~~~~L~~lG-l~~~l~~~~~~~~~   72 (400)
T PRK06475          2 RGSILIAGAGVAGLSAALELAARGWAVTIIEKAQELSEVGAGLQLAPN--------AMRHLERLG-VADRLSGTGVTPKA   72 (400)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECHH--------HHHHHHHCC-CHHHHHHCCCCCCE
T ss_conf             997999895889999999999789999999179988888847888889--------999999879-92788843888625


Q ss_pred             HH------------HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEH-HHHCCCCCCCCCEEEE-E-ECCC
Q ss_conf             14------------887307878555346787849999999999997089968980-0101120258811322-2-0358
Q gi|254780808|r   78 IQ------------FRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ-GEVAGFNTEKNIISSI-V-MQDN  142 (626)
Q Consensus        78 i~------------~r~ln~skGpAv~alraqvDR~~fs~~vt~~l~~~pni~i~~-~eV~~l~~~~~~~~~v-~-~~~g  142 (626)
T Consensus        73 ~~~~d~~~~~~~~~~~~~~~~~~-~~~~p~~~i~R~~L~~~L~~~~~~~~~i~i~~g~~v~~~~~~~~~v~~~~~~~~~~  151 (400)
T PRK06475         73 LYLMDGRKARPLLHMQLGDLARK-RWHHPYIVCHRADLQSALLDACRNNPGIEIKLGAEMTSQRQTGNSITATIIRTNSV  151 (400)
T ss_pred             EEEEECCCCCEEEEECCCCCCCC-CCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCCEEEEEECCCCC
T ss_conf             99960786745652024432222-57896599778999999999997489948973878999995289604899738986


Q ss_pred             CCCCCCCCCCCCCC
Q ss_conf             63344543334664
Q gi|254780808|r  143 SMIRCSTVVLTTGT  156 (626)
Q Consensus       143 ~~~~~~~viiatGt  156 (626)
T Consensus       152 ~~~~adlvIGADGi  165 (400)
T PRK06475        152 ETVSAAYLIACDGV  165 (400)
T ss_pred             EEEECCEEEECCCC
T ss_conf             69970689966997