HHsearch alignment for GI: 254780808 and conserved domain: TIGR00551

>TIGR00551 nadB L-aspartate oxidase; InterPro: IPR005288 L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbour-joining trees.; GO: 0008734 L-aspartate oxidase activity, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=98.37  E-value=6.9e-06  Score=61.34  Aligned_cols=362  Identities=21%  Similarity=0.249  Sum_probs=207.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECC-HHH----------CC-CCCCCC-CCCC-------CCHH----HHHH
Q ss_conf             357889889426899999998589989999807-626----------01-246670-0221-------1224----8999
Q gi|254780808|r    5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHK-TST----------IG-SMSCNP-AIGG-------LGKG----HLVR   60 (626)
Q Consensus         5 ~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~-~~~----------~a-el~Cnp-s~gg-------~akg----~L~~   60 (626)
T Consensus         2 ~~dV~viGsGaAGL~aAlal~~~~~~V~v~~K~a~~~~~~s~yAQGGIAa~~~~~DdSi~~Hv~DTL~AGaG~cD~~aV~   81 (546)
T TIGR00551         2 EADVVVIGSGAAGLSAALALAEKYRDVVVISKAAEVKESASYYAQGGIAAALAETDDSIDAHVEDTLAAGAGLCDEEAVE   81 (546)
T ss_pred             CCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             63599975208999999853326863789758755556752000112663038755856877899998446788688999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH----------HCCCCC---------CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEH
Q ss_conf             9986303999999886314887----------307878---------555346787849999999999997089968980
Q gi|254780808|r   61 EIDALDGLMGRVADAAGIQFRV----------LNVKKG---------PAVRGPRTQADRELYRLAMQREILSQENLDVIQ  121 (626)
Q Consensus        61 Ei~aLgg~m~~~aD~~~i~~r~----------ln~skG---------pAv~alraqvDR~~fs~~vt~~l~~~pni~i~~  121 (626)
T Consensus        82 ~v~~~~~~av~~L~~~Gv~FD~~~~gnGee~~~LtrEGgHS~~RI~HA~GDaTGr~~~-----~~L~~~a~~~p~~~~~~  156 (546)
T TIGR00551        82 FVVSDAKEAVQELVEAGVSFDRNEQGNGEERLALTREGGHSYRRILHAAGDATGREVI-----STLLKKARSEPNVEIIE  156 (546)
T ss_pred             HHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH-----HHHHHHHHCCCCEEECC
T ss_conf             9985368999999866922026779887443100133566777427735763248999-----99999974377624101


Q ss_pred             H-HHCCCCCC-------CCCEEEEEECCC-----CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             0-10112025-------881132220358-----6334454333466431013444320233222475111331000010
Q gi|254780808|r  122 G-EVAGFNTE-------KNIISSIVMQDN-----SMIRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSLFNSFMK  188 (626)
Q Consensus       122 ~-eV~~l~~~-------~~~~~~v~~~~g-----~~~~~~~viiatGtfl~g~~~~g~~~~~~gr~~~~~s~~ls~~l~~  188 (626)
T Consensus       157 ~~~A~~l~i~dkiGlP~~g~~~G~~v~~~nK~~~e~~~a~aVvLAtGG~g~-----------------------------  207 (546)
T TIGR00551       157 GEVALDLLIEDKIGLPTTGRVVGVLVVDSNKETVETLHADAVVLATGGLGK-----------------------------  207 (546)
T ss_pred             CCEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEEEECCCCCH-----------------------------
T ss_conf             214444442250247988879999997167872377630100032077321-----------------------------


Q ss_pred             HHHHCCCCCCCCCCHHHHCHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCC--CC-CCCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf             11200544445441011000013443-211478766877743565780000--00-001232001477764024575414
Q gi|254780808|r  189 FDFDTGRLKTGTPARLDGKTIIWDKT-EKQFADERLIPFSFMTDKITNRQI--EC-GITRTNLETHRIIMENIKHSAIYS  264 (626)
Q Consensus       189 ~~~~~~r~ktgtppri~~~sidf~~~-e~q~~d~~~~~~s~~~~~~~~~q~--~~-~~~~t~~~~~~~~~~~~~~~~~~~  264 (626)
T Consensus       208 -----ly~~TTNp~~stGDGIala~raG~~v~DL--EF~QFHPT~L~~~~~GG~~~LitEAv-------RGEGA~-----  268 (546)
T TIGR00551       208 -----LYSFTTNPKVSTGDGIALAWRAGVEVRDL--EFVQFHPTALVKPRVGGRYFLITEAV-------RGEGAI-----  268 (546)
T ss_pred             -----HHHHHCCCCCCCCHHHHHHHHCCCCEECC--CCCCCCCCCCCCCCCCCCCCCCCCEE-------ECCCCE-----
T ss_conf             -----00312388742314689998728722046--34256721113788789876400110-------038742-----


Q ss_pred             CCCCCCCCCCCC--------------C--CCCCCCCCCC-CCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHH
Q ss_conf             432356422255--------------3--2123356764-3345201301578776454347766689889999998754
Q gi|254780808|r  265 GDIKSYGPRYCP--------------S--IEDKIVRFGE-RNGHQIFLEPEGLNTDVVYPNGISTALPEEIQHQFIRTIP  327 (626)
Q Consensus       265 g~~~~~gprycP--------------s--ie~k~~~~~~-~p~h~VqLrpE~~~~~~~n~vGFqTsL~~~~Q~rv~r~IP  327 (626)
T Consensus       269 -Lvd~~G~Rf~~~~hp~GeLAPRDiVaRAI~~~m~~~~~dPtqacVfLD~s~Ie~~-----~f~~RFP~I~~--------  334 (546)
T TIGR00551       269 -LVDRDGKRFMADVHPRGELAPRDIVARAIDEEMKKGGKDPTQACVFLDASGIEDD-----FFKSRFPTITA--------  334 (546)
T ss_pred             -EECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH-----HHHCCCCHHHH--------
T ss_conf             -3558886702677888876740488999999997228793406888743588834-----65212727899--------


Q ss_pred             HHHHCCEEEECCHHHHCCCC--HH--------HHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHH---------------
Q ss_conf             34001001100012110235--45--------656776540334156621330433466666677---------------
Q gi|254780808|r  328 GLEKVNIIRPGYAIEYDYIN--PK--------ELFPTLETKKISGLFLAGQINGTTGYEEAAAQG---------------  382 (626)
Q Consensus       328 GLEnAef~R~Gy~ieyd~~~--P~--------~L~~tLe~k~~~~LffAGQI~GteGYeEAAAqG---------------  382 (626)
T Consensus       335 -----~c~~~GID~~~~~IPv~P~AHY~~GGi~vD~~g~T~-~~GLYAiG---------E~A~tGlHGANRLASNSLLEc  399 (546)
T TIGR00551       335 -----KCRGAGIDIVREPIPVVPAAHYTMGGISVDAYGRTT-VPGLYAIG---------EVACTGLHGANRLASNSLLEC  399 (546)
T ss_pred             -----HHHHCCCCCCCCCCCCCCCCCEEECCEEECCCCEEC-CCCEEEEH---------HHHCCCCCHHHHHHHHHHHHH
T ss_conf             -----998578875558715446671573678875763321-34301200---------243066511467777878899


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             899999874203345654653210799999988607877-4024420001221211578713668887
Q gi|254780808|r  383 LVAGINSARKSNKLDCICFSRTDSYIGVMIDDLTSKGVL-EPYRMFTSRAEYRISLRPDNADNRLTPI  449 (626)
Q Consensus       383 l~AGiNa~~~~~~~~p~~l~R~eaYiGVlIDDLitkg~~-EPYRMfTSRAEyRL~LR~DNAd~RLt~~  449 (626)
T Consensus       400 lV~G~~aa~~i~~~~~-~~Grs~~~~~~~~~e~~~~~~~~d~~~Lq~~~~~~~~~~w~~aGi~R~~~~  466 (546)
T TIGR00551       400 LVFGLRAARAISRKPP-AAGRSDESSSALWDEPRSETPDIDRAELQHKMSELRSLLWEAAGIVRLSES  466 (546)
T ss_pred             HHHHHHHHHHHHHHHH-HCCCCCHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf             8732899999865355-336651002666554134237751456645766889999974014455789