HHsearch alignment for GI: 254780808 and conserved domain: TIGR01292
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase; InterPro: IPR005982 Reactive oxygen species (ROS) are known mediators of intracellular signaling cascades. Excessive production of ROS may, however, lead to oxidative stress, loss of cell function, and ultimately apoptosis or necrosis. A balance between oxidant and antioxidant intracellular systems is hence vital for cell function, regulation, and adaptation to diverse growth conditions. Thioredoxin reductase in conjunction with thioredoxin is a ubiquitous oxidoreductase system with antioxidant and redox regulatory roles. Thioredoxin reductase (1.8.1.9 from EC) reduces oxidised thioredoxin in the presence of NADPH. Reduced thioredoxin serves as an electron donor for thioredoxin peroxidase which consequently reduces H_2O_2 to H_2O. In mammals, extracellular forms of Trx also have cytokine-like effects. Mammalian TrxR has a highly reactive active site selenocysteine residue resulting in a profound reductive capacity, reducing several substrates in addition to Trx .; GO: 0004791 thioredoxin-disulfide reductase activity, 0019430 removal of superoxide radicals, 0005737 cytoplasm.
Probab=98.25 E-value=4.3e-06 Score=62.80 Aligned_cols=300 Identities=19% Similarity=0.211 Sum_probs=146.3
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEE-CCHH-HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 578898894268999999985899899998-0762-60124667002211224899999863039999998863148873
Q gi|254780808|r 6 YDVIVIGGGHAGCEAAAVAAKLGASTALIT-HKTS-TIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVL 83 (626)
Q Consensus 6 ~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~-~~~~-~~ael~Cnps~gg~akg~L~~Ei~aLgg~m~~~aD~~~i~~r~l 83 (626)
T Consensus 1 ~DviIIGaGPAGlTAAIYa~Ra~l~~l~~eg~~~G~aGGql~~T~~vE-------------------------------- 48 (321)
T TIGR01292 1 YDVIIIGAGPAGLTAAIYAARANLKTLLIEGMEPGIAGGQLTTTTEVE-------------------------------- 48 (321)
T ss_pred CCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEE--------------------------------
T ss_conf 928998478678889999887467278983577774555333220651--------------------------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEH-HHHCCCCCCCC----CEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 07878555346787849999999999997089968980-01011202588----11322203586334454333466431
Q gi|254780808|r 84 NVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQ-GEVAGFNTEKN----IISSIVMQDNSMIRCSTVVLTTGTFL 158 (626)
Q Consensus 84 n~skGpAv~alraqvDR~~fs~~vt~~l~~~pni~i~~-~eV~~l~~~~~----~~~~v~~~~g~~~~~~~viiatGtfl 158 (626)
T Consensus 49 NY---PGf~e~---i~G~~L~~~M~~Qa~~f-G~~~~~G~~v~~v~~~~~~yE~~~F~~~~~--~~y~a~avIiAtGa~~ 119 (321)
T TIGR01292 49 NY---PGFPEG---ISGPELMEKMKEQAKKF-GAEIIYGEEVIRVDKSDRAYESDPFKVKTG--KEYTAKAVIIATGAEA 119 (321)
T ss_pred CC---CCCCCC---CCHHHHHHHHHHHHHHC-CCCEEECCEEEEEECCCCCCCCCEEEEEEC--CEEEEEEEEEECCCHH
T ss_conf 36---868887---66288999999999870-673662670568633788436610389717--5688658999138715
Q ss_pred HHHHHHHHCCCCCCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCHHHHHH---HHHCCCCCCCCCCCCCCCCCC
Q ss_conf 0134443202332224-751113310000101120054444544101100001344---321147876687774356578
Q gi|254780808|r 159 RGVIHIGKLKIPAGRM-GDSPSNSLFNSFMKFDFDTGRLKTGTPARLDGKTIIWDK---TEKQFADERLIPFSFMTDKIT 234 (626)
Q Consensus 159 ~g~~~~g~~~~~~gr~-~~~~s~~ls~~l~~~~~~~~r~ktgtppri~~~sidf~~---~e~q~~d~~~~~~s~~~~~~~ 234 (626)
T Consensus 120 r~----------lg~~kGE~ef~GrGV-----------SyCA~C---DGA~~ffk~K~V~VvGGGds------------- 162 (321)
T TIGR01292 120 RK----------LGIPKGEDEFLGRGV-----------SYCATC---DGASPFFKNKEVAVVGGGDS------------- 162 (321)
T ss_pred HH----------CCCCCCHHHHCCCCE-----------EEEEHH---CCCCHHHCCCEEEEECCCCH-------------
T ss_conf 42----------378866455326866-----------672231---05401205988999879824-------------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCC-CCCCCCCEEE-ECCCCCCEEEE
Q ss_conf 00000000123200147776402457541443235642-----22553212335676-4334520130-15787764543
Q gi|254780808|r 235 NRQIECGITRTNLETHRIIMENIKHSAIYSGDIKSYGP-----RYCPSIEDKIVRFG-ERNGHQIFLE-PEGLNTDVVYP 307 (626)
Q Consensus 235 ~~q~~~~~~~t~~~~~~~~~~~~~~~~~~~g~~~~~gp-----rycPsie~k~~~~~-~~p~h~VqLr-pE~~~~~~~n~ 307 (626)
T Consensus 163 A~eEA~yL~~~a~kV~lvHRRd~fRA~k~~~~r~~~~~eG~I~~l~n~~v~Ei~G~~~~~V~~-v~i~N~~t~e~~~l~v 241 (321)
T TIGR01292 163 ALEEALYLTRIAKKVTLVHRRDKFRAEKILLDRLKKNPEGKIEFLWNSTVEEIVGDNSKKVES-VKIKNTVTGEEEELKV 241 (321)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCEEEEEECCCCEEEEE-EEEEECCCCEEEEEEE
T ss_conf 888889998538767999779863632899989983789878996486899996178315533-5899623884889984
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHHCCCCHHHHHHHHHHHCCCEEEEEEEEECCCHH---HHHHHHHHH
Q ss_conf 47766689889999998754340010011000121102354565677654033415662133043346---666667789
Q gi|254780808|r 308 NGISTALPEEIQHQFIRTIPGLEKVNIIRPGYAIEYDYINPKELFPTLETKKISGLFLAGQINGTTGY---EEAAAQGLV 384 (626)
Q Consensus 308 vGFqTsL~~~~Q~rv~r~IPGLEnAef~R~Gy~ieyd~~~P~~L~~tLe~k~~~~LffAGQI~GteGY---eEAAAqGl~ 384 (626)
T Consensus 242 dGvF~aIG~~P~t~~~~~~---G~~~~D~~GyI~t----~~~~-Gn~~~Ts-v~GvFAAGDv~~kW~~rQ~vTAag~G~~ 312 (321)
T TIGR01292 242 DGVFIAIGHEPNTELLKGL---GLLELDEGGYIVT----DEGL-GNTMRTS-VPGVFAAGDVRDKWGFRQAVTAAGDGCI 312 (321)
T ss_pred CEEEEEECCCCCHHHHHCC---CCEEECCCCCEEE----CCCC-CCEEECC-CCCEEEEEEEECCCCCEEEEEEECHHHH
T ss_conf 4478984120320576507---8346769986886----1754-8612306-6868973044068861376787000689
Q ss_pred HHHHHHHHC
Q ss_conf 999987420
Q gi|254780808|r 385 AGINSARKS 393 (626)
Q Consensus 385 AGiNa~~~~ 393 (626)
T Consensus 313 AA~~a~~yL 321 (321)
T TIGR01292 313 AALSAERYL 321 (321)
T ss_pred HHHHHHHHC
T ss_conf 999998709