HHsearch alignment for GI: 254780808 and conserved domain: TIGR01789
>TIGR01789 lycopene_cycl lycopene cyclase; InterPro: IPR008461 This family consists of several bacterial Lycopene cyclase (CrtY) proteins. Lycopene cyclase is a key enzyme which converts the acyclic carotenoid lycopene into the cyclic carotenoid beta-carotene .; GO: 0045436 lycopene beta cyclase activity, 0016117 carotenoid biosynthetic process.
Probab=95.64 E-value=0.012 Score=38.35 Aligned_cols=147 Identities=19% Similarity=0.279 Sum_probs=83.6
Q ss_pred CEEEECCCHHHHHHHHHH--HHCCCCEEEEECCHHHCCCCCCCCCCCCCCH-----------HH-HHHHHHHH---HHHH
Q ss_conf 788988942689999999--8589989999807626012466700221122-----------48-99999863---0399
Q gi|254780808|r 7 DVIVIGGGHAGCEAAAVA--AKLGASTALITHKTSTIGSMSCNPAIGGLGK-----------GH-LVREIDAL---DGLM 69 (626)
Q Consensus 7 dViVIGaG~AG~EAA~~~--Ar~G~~v~L~~~~~~~~ael~Cnps~gg~ak-----------g~-L~~Ei~aL---gg~m 69 (626)
T Consensus 1 D~i~vGgGLAggLIALrL~~arPd~Ri~~IE----------a~~~igGNHtWSffd~Dls~~qhawla~lv~~~WpgGYe 70 (392)
T TIGR01789 1 DVIVVGGGLAGGLIALRLQDARPDLRILVIE----------AAASIGGNHTWSFFDADLSDAQHAWLADLVVYDWPGGYE 70 (392)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEEE----------CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCE
T ss_conf 9788727335789999875259872899984----------377668875301003666743577765340132889713
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCEEEEEEC-----CCCC
Q ss_conf 99998863148873078785553467878499999999999970899689800101120258811322203-----5863
Q gi|254780808|r 70 GRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQ-----DNSM 144 (626)
Q Consensus 70 ~~~aD~~~i~~r~ln~skGpAv~alraqvDR~~fs~~vt~~l~~~pni~i~~~eV~~l~~~~~~~~~v~~~-----~g~~ 144 (626)
T Consensus 71 VRFp~~----rrkL~t----aY~S~----tStrf~e~l~q~fpe~s--~~~~r~a~~~~Ad~-----V~L~PsqyG~g~~ 131 (392)
T TIGR01789 71 VRFPKR----RRKLKT----AYLSM----TSTRFREELEQKFPERS--VLLDRKAVEVDADA-----VDLEPSQYGNGRV 131 (392)
T ss_pred ECCHHH----HHHHHC----CCCCC----HHHHHHHHHHHHCCCCE--EEECCEEEEEEECE-----EEECCCCCCCCCE
T ss_conf 335555----433210----22110----01778999998768720--56401567766075-----6626544689626
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 34454333466431013444320233222475111331
Q gi|254780808|r 145 IRCSTVVLTTGTFLRGVIHIGKLKIPAGRMGDSPSNSL 182 (626)
Q Consensus 145 ~~~~~viiatGtfl~g~~~~g~~~~~~gr~~~~~s~~l 182 (626)
T Consensus 132 i~A~~VID~Rg~~P~~~L~~GfQ~FlG~e~RL~~PHGl 169 (392)
T TIGR01789 132 IRARAVIDARGFKPSAALKVGFQVFLGREVRLAEPHGL 169 (392)
T ss_pred EEEEEEEECCCCCCCCCCCCCHHHHHCCCHHCCCCCCC
T ss_conf 76402772588877721025323442320001578888