>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit; InterPro: IPR011280 This entry represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes..

Probab=97.05 E-value=0.00057 Score=47.75 Aligned_cols=139 Identities=24% Similarity=0.308 Sum_probs=76.3 Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECCH-HHCCCCCC-----CCCC------------------CCC--C------- Q ss_conf 8898894268999999985899899998076-26012466-----7002------------------211--2------- Q gi|254780808|r 8 VIVIGGGHAGCEAAAVAAKLGASTALITHKT-STIGSMSC-----NPAI------------------GGL--G------- 54 (626) Q Consensus 8 ViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~-~~~ael~C-----nps~------------------gg~--a------- 54 (626) T Consensus 1 viVVGtGLaG~~A~~~lae~G~~V~~F~~~d~prRaHSiaAQGGiN~A~n~k~dgD~~~~~f~DTvkGGDfr~res~v~r 80 (620) T TIGR01811 1 VIVVGTGLAGGSAAAKLAELGYHVKLFSYQDAPRRAHSIAAQGGINAAKNTKNDGDSVWRHFDDTVKGGDFRSRESNVKR 80 (620) T ss_pred CEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCHHHH T ss_conf 96855653478999999864885125440588762000000266200256567888416653140323533677752789 Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH-------------HHHHHHHCCCCC Q ss_conf ----248999998630399999988631488730787855534678784999999-------------999999708996 Q gi|254780808|r 55 ----KGHLVREIDALDGLMGRVADAAGIQFRVLNVKKGPAVRGPRTQADRELYRL-------------AMQREILSQENL 117 (626) Q Consensus 55 ----kg~L~~Ei~aLgg~m~~~aD~~~i~~r~ln~skGpAv~alraqvDR~~fs~-------------~vt~~l~~~pni 117 (626) T Consensus 81 la~~s~~iId~~~a~GvpFaRe~gG-lLd----~RsFG--G----~qvsRT~Yarg~TGQQLl~~~~~a~~r~~~~G-~v 148 (620) T TIGR01811 81 LAEISPEIIDLMDAMGVPFAREYGG-LLD----TRSFG--G----VQVSRTFYARGQTGQQLLLAADSALRRQIAAG-TV 148 (620) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCC-CCC----CCCCC--C----EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC-CE T ss_conf 9873089999986458843455466-300----13468--6----00012134177627899999999998888627-35 Q ss_pred EEE-HHHHCCCCCCCC----CEEE-----EEECCCCCCCCCCCCCCCCCCC Q ss_conf 898-001011202588----1132-----2203586334454333466431 Q gi|254780808|r 118 DVI-QGEVAGFNTEKN----IISS-----IVMQDNSMIRCSTVVLTTGTFL 158 (626) Q Consensus 118 ~i~-~~eV~~l~~~~~----~~~~-----v~~~~g~~~~~~~viiatGtfl 158 (626) T Consensus 149 ~~y~~~e~ld~iv~d~~gek~arGi~arnL~Tge~~~~~adAVilAtGGyg 199 (620) T TIGR01811 149 EKYERWEMLDIIVVDGDGEKRARGIIARNLVTGEIETFSADAVILATGGYG 199 (620) T ss_pred EEEECCEEEEEEEECCCCCCEEEEEEECCCCCCHHHCCCCCEEEEECCCCH T ss_conf 664165168898875887502200121024000000003566898128860

HHsearch alignment for GI: 254780808 and conserved domain: TIGR01811