HHsearch alignment for GI: 254780808 and conserved domain: TIGR03169

>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=98.28  E-value=4.8e-07  Score=69.56  Aligned_cols=104  Identities=18%  Similarity=0.328  Sum_probs=69.1

Q ss_pred             CEEEECCCHHHHHHHHHHHHC---CCCEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             788988942689999999858---99899998076260124667002211224899999863039999998863148873
Q gi|254780808|r    7 DVIVIGGGHAGCEAAAVAAKL---GASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRVL   83 (626)
Q Consensus         7 dViVIGaG~AG~EAA~~~Ar~---G~~v~L~~~~~~~~ael~Cnps~gg~akg~L~~Ei~aLgg~m~~~aD~~~i~~r~l   83 (626)
T Consensus         1 hiVIvGgG~aG~~~a~~L~~~~~~~~~ItLId~~~~~~----y~~~lp~~~-----------~g~~--------------   51 (364)
T TIGR03169         1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSSTTP----YSGMLPGMI-----------AGHY--------------   51 (364)
T ss_pred             CEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCE----ECCHHHHHH-----------HCCC--------------
T ss_conf             99999960999999999704178998399999988651----625169997-----------4047--------------


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             078785553467878499999999999970899689800101120258811322203586334454333466431
Q gi|254780808|r   84 NVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQGEVAGFNTEKNIISSIVMQDNSMIRCSTVVLTTGTFL  158 (626)
Q Consensus        84 n~skGpAv~alraqvDR~~fs~~vt~~l~~~pni~i~~~eV~~l~~~~~~~~~v~~~~g~~~~~~~viiatGtfl  158 (626)
T Consensus        52 ---------------~~~~i~~~~~~~-~~~~gv~~i~~~V~~ID~~~k~---V~~~~g~~l~YD~LViAtGs~~  107 (364)
T TIGR03169        52 ---------------SLDEIRIDLRRL-ARQAGARFVIAEATGIDPDRRK---VLLANRPPLSYDVLSLDVGSTT  107 (364)
T ss_pred             ---------------CHHHEECCHHHH-HHHCCCEEEEEEEEEEECCCCE---EEECCCCEEECCEEEEECCCCC
T ss_conf             ---------------799922168999-9777949996378999768898---9988998873688999436777