HHsearch alignment for GI: 254780808 and conserved domain: TIGR03169
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=94.90 E-value=0.22 Score=29.33 Aligned_cols=49 Identities=20% Similarity=0.123 Sum_probs=39.3
Q ss_pred HHHHHHHHCCCEEEEEEEEECC-------CHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 5677654033415662133043-------3466666677899999874203345654
Q gi|254780808|r 351 LFPTLETKKISGLFLAGQINGT-------TGYEEAAAQGLVAGINSARKSNKLDCIC 400 (626)
Q Consensus 351 L~~tLe~k~~~~LffAGQI~Gt-------eGYeEAAAqGl~AGiNa~~~~~~~~p~~ 400 (626)
T Consensus 262 Vd~~lq~~~~~~VfAiGD~a~~~~~p~pk~g~-~A~~qa~~~a~Ni~~~l~g~~~~~ 317 (364)
T TIGR03169 262 VDPTLQSLSHPHVFAAGDCAVITDAPRPKAGV-YAVRQAPILAANLRASLRGQPLRP 317 (364)
T ss_pred ECCCCEECCCCCEEEECCEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 78873768999999971543688999997438-899999999999999966999999