HHsearch alignment for GI: 254780808 and conserved domain: TIGR03329
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.
Probab=98.19 E-value=2.1e-05 Score=57.98 Aligned_cols=112 Identities=14% Similarity=0.126 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHCCEEE-ECCHHHHCCCCHHHHHHHH-HHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999998754340010011-0001211023545656776-5403341566213304334666666778999998742033
Q gi|254780808|r 318 IQHQFIRTIPGLEKVNIIR-PGYAIEYDYINPKELFPTL-ETKKISGLFLAGQINGTTGYEEAAAQGLVAGINSARKSNK 395 (626)
Q Consensus 318 ~Q~rv~r~IPGLEnAef~R-~Gy~ieyd~~~P~~L~~tL-e~k~~~~LffAGQI~GteGYeEAAAqGl~AGiNa~~~~~~ 395 (626)
T Consensus 323 l~~~l~~~FP~L~~v~i~~~W~-G~~~~t~d--~-~P~iG~~~~~~gv~~a~Gy~G~-----Gv~~s~l~G~~lAdli~G 393 (460)
T TIGR03329 323 LTRSLRKFFPALAEVPIAASWN-GPSDRSVT--G-LPFFGRLNGQPNVFYGFGYSGN-----GVAPSRMGGQILSSLVLG 393 (460)
T ss_pred HHHHHHHHCCCCCCCCEEEEEE-CEECCCCC--C-CCEEEEECCCCCEEEEECCCCC-----CHHHHHHHHHHHHHHHCC
T ss_conf 9999998576555971789970-86363688--9-8469876799999999780797-----567899999999999749
Q ss_pred CC-CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 45-654653210799999988607877402442000122121157871366
Q gi|254780808|r 396 LD-CICFSRTDSYIGVMIDDLTSKGVLEPYRMFTSRAEYRISLRPDNADNR 445 (626)
Q Consensus 396 ~~-p~~l~R~eaYiGVlIDDLitkg~~EPYRMfTSRAEyRL~LR~DNAd~R 445 (626)
T Consensus 394 ~~~~~~~--~-----~~~~~~~~~~pPeP~r~lG~~~~~~~~~~~d~~e~~ 437 (460)
T TIGR03329 394 LDNPWTR--S-----PLVKGPLGYFPPEPIRYLGALVVRNAIRRKERAEDE 437 (460)
T ss_pred CCCHHHH--C-----HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9981343--8-----342299999999407899999999999988878746