HHsearch alignment for GI: 254780808 and conserved domain: pfam01494
>pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
Probab=97.86 E-value=1.4e-05 Score=59.13 Aligned_cols=146 Identities=16% Similarity=0.203 Sum_probs=75.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf 35788988942689999999858998999980762601246670022112248999998630399999988631488---
Q gi|254780808|r 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFR--- 81 (626)
Q Consensus 5 ~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~ael~Cnps~gg~akg~L~~Ei~aLgg~m~~~aD~~~i~~r--- 81 (626)
T Consensus 1 ~~DV~IvGaG~aGl~lA~~L~~~Gi~v~V~Er~~~~~-~~g~g--~-~l~p-~~~~~L~~lGl~-~~~~~~~~~~~~~~~ 74 (349)
T pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTS-VLPRA--G-GLNQ-RTMELLRQAGLE-DRILAEGAPHEGMGL 74 (349)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCC-CCCEE--E-EECH-HHHHHHHHCCCH-HHHHHCCCCCCEEEE
T ss_conf 9978999928899999999987799899992899988-78779--9-9898-999999987986-899850687510599
Q ss_pred -HHCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHCCCCCEE-EHHHHCCCCCCCCCEEEEE----ECCCCCCCCCC
Q ss_conf -73078785------553467878499999999999970899689-8001011202588113222----03586334454
Q gi|254780808|r 82 -VLNVKKGP------AVRGPRTQADRELYRLAMQREILSQENLDV-IQGEVAGFNTEKNIISSIV----MQDNSMIRCST 149 (626)
Q Consensus 82 -~ln~skGp------Av~alraqvDR~~fs~~vt~~l~~~pni~i-~~~eV~~l~~~~~~~~~v~----~~~g~~~~~~~ 149 (626)
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~i~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~i~adl 153 (349)
T pfam01494 75 AFYNTSRRRADLDFLTSPPRVTVYPQTELEPILREHAEARG-AQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTVRAKY 153 (349)
T ss_pred EECCCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCC-CEEEECCEEEEEEECCCCEEEEEEECCCCCEEEEEEEE
T ss_conf 98378642220145567762688629999999999998579-98996617877520599437999845899558999768
Q ss_pred CCCCCCCC
Q ss_conf 33346643
Q gi|254780808|r 150 VVLTTGTF 157 (626)
Q Consensus 150 viiatGtf 157 (626)
T Consensus 154 vIgADG~~ 161 (349)
T pfam01494 154 LVGCDGGR 161 (349)
T ss_pred EECCCCCC
T ss_conf 84157776