HHsearch alignment for GI: 254780808 and conserved domain: pfam01946
>pfam01946 Thi4 Thi4 family. This family includes a putative thiamine biosynthetic enzyme.
Probab=98.32 E-value=1.9e-06 Score=65.32 Aligned_cols=132 Identities=24% Similarity=0.322 Sum_probs=80.5
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3578898894268999999985899899998076260124667002211--22489999986303999999886314887
Q gi|254780808|r 5 SYDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTIGSMSCNPAIGGL--GKGHLVREIDALDGLMGRVADAAGIQFRV 82 (626)
Q Consensus 5 ~~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~ael~Cnps~gg~--akg~L~~Ei~aLgg~m~~~aD~~~i~~r~ 82 (626)
T Consensus 17 e~DV~IVGaGpsGL~aA~~LAk~g~KV~i~E~~l----------s~GGG~WgGGmlfn~ivv~-~~a~~iLde~gi~y~~ 85 (229)
T pfam01946 17 ESDVVIVGAGPSGLTAAYYLAKKGLKVAIIERSL----------SPGGGAWGGGMLFSAMVVR-KPADEFLDEFGIRYED 85 (229)
T ss_pred HCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCC----------CCCCCCCCCCCCCCCEEEC-CHHHHHHHHCCCCCEE
T ss_conf 2688998878179999999987898599996452----------6888620201225633764-1389999974995276
Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHH-HHCCCCCCCCCEEEEEECCCCC-----------CCCCCC
Q ss_conf 3078785553467878499999999999970899689800-1011202588113222035863-----------344543
Q gi|254780808|r 83 LNVKKGPAVRGPRTQADRELYRLAMQREILSQENLDVIQG-EVAGFNTEKNIISSIVMQDNSM-----------IRCSTV 150 (626)
Q Consensus 83 ln~skGpAv~alraqvDR~~fs~~vt~~l~~~pni~i~~~-eV~~l~~~~~~~~~v~~~~g~~-----------~~~~~v 150 (626)
T Consensus 86 -------~~~g~~v-~ds~~~~s~L~s~a~~-aGakifn~~~VEDli~r~~rV~GvViNWt~V~~~g~hvDP~~i~ak~V 156 (229)
T pfam01946 86 -------EGDYVVV-ADAAEFTSTLASKALQ-PGVKIFNATSVEDLIIRDNRVAGVVTNWTLVEMAGLHMDPLTIRAKAV 156 (229)
T ss_pred -------CCCCEEE-ECHHHHHHHHHHHHHC-CCCEEEECCEEEEEEEECCCEEEEEEEEEHHHHCCCCCCCCCCCCEEE
T ss_conf -------4796699-4499999999999767-898998244888899967927999984114444367558421100179
Q ss_pred CCCCCC
Q ss_conf 334664
Q gi|254780808|r 151 VLTTGT 156 (626)
Q Consensus 151 iiatGt 156 (626)
T Consensus 157 vDaTGH 162 (229)
T pfam01946 157 VDATGH 162 (229)
T ss_pred EECCCC
T ss_conf 866889