HHsearch alignment for GI: 254780808 and conserved domain: pfam03486
>pfam03486 HI0933_like HI0933-like protein.
Probab=99.20 E-value=2.7e-10 Score=92.70 Aligned_cols=142 Identities=25% Similarity=0.358 Sum_probs=79.5
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHC------CCCCCC--CCCCC-------CCHHH-HHHHHHHHHHH-
Q ss_conf 578898894268999999985899899998076260------124667--00221-------12248-99999863039-
Q gi|254780808|r 6 YDVIVIGGGHAGCEAAAVAAKLGASTALITHKTSTI------GSMSCN--PAIGG-------LGKGH-LVREIDALDGL- 68 (626)
Q Consensus 6 ~dViVIGaG~AG~EAA~~~Ar~G~~v~L~~~~~~~~------ael~Cn--ps~gg-------~akg~-L~~Ei~aLgg~- 68 (626)
T Consensus 1 yDv~VIGgGaaGl~aAi~aa~~g~~V~ilEk~~~~GkKll~tG~GRCN~TN~~~~~~~~~~~~~~~~fl~~~l~~F~~~d 80 (405)
T pfam03486 1 YDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKILISGGGRCNVTNSVEPDNFLSRYPGNPHFLKSALSRFTPWD 80 (405)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCHHHHHHHCCCCHHHHHHHHHHCCHHH
T ss_conf 97999996699999999998689959999589987501588268961407899979998625775799999998489999
Q ss_pred HHHHHHHHHHHHHHHCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE-EHHHHCCCCCCCCCEEEEEECCCCC
Q ss_conf 99999886314887307878---5553467878499999999999970899689-8001011202588113222035863
Q gi|254780808|r 69 MGRVADAAGIQFRVLNVKKG---PAVRGPRTQADRELYRLAMQREILSQENLDV-IQGEVAGFNTEKNIISSIVMQDNSM 144 (626)
Q Consensus 69 m~~~aD~~~i~~r~ln~skG---pAv~alraqvDR~~fs~~vt~~l~~~pni~i-~~~eV~~l~~~~~~~~~v~~~~g~~ 144 (626)
T Consensus 81 ~~~ff~~~Gl~~~~e--~~GrvfP~s~--~A~~Vl~----~L~~~l~~-~gV~i~~~~~V~~I~~~~~~~~~v~~-~~~~ 150 (405)
T pfam03486 81 FIAWFEELGVPLKEE--DHGRLFPVSD--KASDIVD----ALLNELKE-LGVKIRTRTRVLSVEKDDDGRFRVDT-GGEE 150 (405)
T ss_pred HHHHHHHCCCEEEEC--CCCEEECCCC--CHHHHHH----HHHHHHHH-CCCEEEECCEEEEEEECCCCEEEEEE-CCCE
T ss_conf 999999779905977--8997978989--8699999----99999997-79789958887899975994599994-8958
Q ss_pred CCCCCCCCCCCCC
Q ss_conf 3445433346643
Q gi|254780808|r 145 IRCSTVVLTTGTF 157 (626)
Q Consensus 145 ~~~~~viiatGtf 157 (626)
T Consensus 151 ~~a~~vIlAtGG~ 163 (405)
T pfam03486 151 LEADSLVLATGGL 163 (405)
T ss_pred EEECEEEEECCCC
T ss_conf 9727899904886